Neste trabalho são apresentados os ensaios realizados para a caracterização da cultura de Rauvolfia sellowii Müll. Arg. (Apocynaceae). Foram determinados os parâmetros: pH, peso fresco, peso seco, produção de alcalóides, e consumo de açúcares. A curva de crescimento foi similar às observadas para as culturas de células de outras espécies, estendendo-se até o dia 14. As culturas de R. sellowii não converteram a sacarose em glicose e frutose no meio de cultura. A sacarose foi absorvida diretamente do meio. A absorção completou-se no dia 22. Não houve mudança significativa no pH do meio durante o desenvolvimento celular. A vomilenina foi identificada como o alcalóide majoritário. As alterações na produção deste alcalóide foram avaliadas pela modificações nas condições de cultivo, supressão de auxinas, aumento da concentração de sacarose e mio-inositol, adição de extrato de levedura (eliciador biótico), e adição dos precursores triptofano e triptamina. Em todos os casos houve a supressão da produção de vomilenina. Com exceção da adição de precursores, os tratamentos provocaram o acúmulo de substâncias desconhecidas, possivelmente outros alcalóides. / This work aimed to characterize the growth parameters of a Rauvolfia sellowii Müll. Arg. (Apocynaceae) cell suspension culture. The parameters analyzed were pH variation, biomass accumulation (fresh weight and dry weight), production of alkaloids and sugars uptake. The growth curve was similar to that observed for other plant cells, the culture cycle lasted for 14 days. R. sellowii cultures did not converted sucrose into glucose and fructose in the culture medium. Sucrose was directly taken up from the medium. The complete uptake occurred at day 22. There were no significant changes in the medium pH during the cell development. The major alkaloid accumulated in the cultures was characterized as the vomilenine. The regulation of vomilenine production was also evaluated by changing the culture conditions: depletion of auxins, increase of sucrose and myo-inositol concentration, addition elicitor (yeast extract) and precursor feeding (tryptophan and tryptamine). In all the conditions tested, vomilenine production was suppressed. Moreover, with the exception of precursor feeding, all treatments caused the accumulation of unknown substances, possibly alkaloids.

Thesis (MSc (Genetics. Plant Biotechnology)) --Stellenbosch University, 2008. / The main aim of the work presented in this thesis was to further our understanding of the role of Pyrrophosphate: fructose 6-phosphate 1-phosphotransferase (PFP) in sugarcane, by specifically investigating its potential contribution to phloem metabolism. PFP activity in sugarcane internodal tissue is inversely correlated to sucrose content across varieties that differ in their sucrose accumulation abilities. This apparent correlation is in contrast to previous studies that suggest PFP plays an insignificant role in metabolism. In the first part of this study an immunological characterisation of the two subunits of sugarcane PFP was conducted to establish whether it differ significantly from other plant species in terms of size and distribution. Both the alpha and beta subunit appears to be approximately sixty kilo Daltons in size and uniform in their relative distribution to each other in the various plant organs of sugarcane. Although the observed alpha subunit size is less than that predicted this could be explained at the hand of post translational modification, in essence the sugarcane PFP subunits appear similar than that described for other plants especially that of tobacco which was employed as a model system later on in this study. The only direct way to investigate PFP’s contribution to phloem metabolism is to alter its activity by recombinant DNA technologies. Therefore, in the second part of the study transformation systems were designed for both the constitutive and phloem specific downand up-regulation of PFP activity. For the down-regulation of activity a post transcriptional gene silencing system, i.e. a complementary strand intron hairpin RNA (ihpRNA) silencing system, was employed. A partial sequence of the PFP-beta subunit was isolated and used in vector construction. For the over-expression the Giardia lamblia PFP gene was used. The model plant tobacco was employed to investigate PFP’s effect on phloem metabolism and transport of assimilate. Transgene insertion was accomplished by means of Agobacterium mediated transformation and tissue specific manipulation of PFP activity was confirmed by in situ activity staining.

Neste trabalho são apresentados os ensaios realizados para a caracterização da cultura de Rauvolfia sellowii Müll. Arg. (Apocynaceae). Foram determinados os parâmetros: pH, peso fresco, peso seco, produção de alcalóides, e consumo de açúcares. A curva de crescimento foi similar às observadas para as culturas de células de outras espécies, estendendo-se até o dia 14. As culturas de R. sellowii não converteram a sacarose em glicose e frutose no meio de cultura. A sacarose foi absorvida diretamente do meio. A absorção completou-se no dia 22. Não houve mudança significativa no pH do meio durante o desenvolvimento celular. A vomilenina foi identificada como o alcalóide majoritário. As alterações na produção deste alcalóide foram avaliadas pela modificações nas condições de cultivo, supressão de auxinas, aumento da concentração de sacarose e mio-inositol, adição de extrato de levedura (eliciador biótico), e adição dos precursores triptofano e triptamina. Em todos os casos houve a supressão da produção de vomilenina. Com exceção da adição de precursores, os tratamentos provocaram o acúmulo de substâncias desconhecidas, possivelmente outros alcalóides. / This work aimed to characterize the growth parameters of a Rauvolfia sellowii Müll. Arg. (Apocynaceae) cell suspension culture. The parameters analyzed were pH variation, biomass accumulation (fresh weight and dry weight), production of alkaloids and sugars uptake. The growth curve was similar to that observed for other plant cells, the culture cycle lasted for 14 days. R. sellowii cultures did not converted sucrose into glucose and fructose in the culture medium. Sucrose was directly taken up from the medium. The complete uptake occurred at day 22. There were no significant changes in the medium pH during the cell development. The major alkaloid accumulated in the cultures was characterized as the vomilenine. The regulation of vomilenine production was also evaluated by changing the culture conditions: depletion of auxins, increase of sucrose and myo-inositol concentration, addition elicitor (yeast extract) and precursor feeding (tryptophan and tryptamine). In all the conditions tested, vomilenine production was suppressed. Moreover, with the exception of precursor feeding, all treatments caused the accumulation of unknown substances, possibly alkaloids.

In this study we applied ultra-short laser pulses on a biological sample (Arabidopsis), in order to cut it precisely in a square pattern and subsequently use it for studying stress generation mechanisms. For this purpose, we utilized femtosecond laser pulses at 100 fs pulse width and 80 MHz repetition rate. We took two processing parameters into consideration such as laser power, laser exposure time which is related to the stage speed. Therefore, we were able to find the laser optimum conditions for ablation of biological tissues. The mutant and wildtype (control) obtained from laser cutting with a size of 500 µm × 500 µm were directly transferred (in-situ with laser cutting) into a microfabricated chamber containing ~500 nanoliters deionized water for measuring ion conductivity. The ion conductivity is a signature of cell-death mechanisms caused by various stresses. A light with intensity of 100 µmol was exposed to the samples for 2 hours and 20 minutes as a source of stress. A quantitative electrical analysis with high accuracy was assured by utilizing a microchamber, which enables a measurement in nanoliter volume. We measured the impedance which is reciprocal of conductivity using a lock-in amplifier and a precise current source at frequency of 130 Hz. Initially high impedance of mutant sample tended to drop within 2 hours and finally approached the constant value which signified that the cell death mechanism was complete. However, the wildtype sample demonstrated approximately constant impedance (conductivity) during the experiment.

Le champ électrique d'une puissance suffisante peut provoquer une augmentation de conductivité et perméabilité de la membrane cellulaire. L'effet est connu comme l'électroporation, attribuée à la création de voies aqueuses dans la membrane. Quantifier le transport de la matière dans le cadre d'électroporation est un objectif important. Comprendre ces processus a des ramifications dans l’extraction du jus ou l’extraction sélective des composés de cellules végétales, l'amélioration de l'administration de médicaments, et des solutions aux défis environnementaux. Il y a un manque de modèles qui pourraient être utilisés pour modéliser le transport de la matière dans les structures complexes (tissus biologiques) par rapport à l'électroporation. Cette thèse présente une description mathématique théorique (un modèle) pour étudier le transport de la matière et le transfert de la chaleur dans tissu traité par l’électroporation. Le modèle a été développé en utilisant les lois de conservation et de transport et permet le couplage des effets de l'électroporation sur la membrane des cellules individuelles au transport de la matière ou la chaleur dans le tissu. Une solution analytique a été trouvée par une simplification, mais le modèle peut être étendu avec des dépendances fonctionnelles supplémentaires et résolu numériquement. La thèse comprend cinq articles sur l'électroporation dans l'industrie alimentaire, la création de modèle pour le problème de diffusion, la traduction du modèle au problème lié à l’expression de jus, validation du modèle, ainsi que des suggestions pour une élaboration future du modèle. Un chapitre supplémentaire est dédié au transfert de la chaleur dans tissu. / An electric field of sufficient strength can cause an increase of conductivity and permeability of cell membrane. Effect is known as electroporation and is attributed to creation of aqueous pathways in the membrane. Quantifying mass transport in connection with electroporation of biological tissues is an important goal. The ability to fully comprehend transport processes has ramifications in improved juice extraction and improved selective extraction of compounds from plant cells, improved drug delivery, and solutions to environmental challenges. While electroporation is intensively investigated, there is a lack of models that can be used to model mass transport in complex structures such as biological tissues with relation to electroporation. This thesis presents an attempt at constructing a theoretical mathematical description – a model, for studying mass (and heat) transfer in electroporated tissue. The model was developed employing conservation and transport laws and enables coupling effects of electroporation to the membrane of individual cells with the resulting mass transport or heat transfer in tissue. An analytical solution has been found though the model can be extended with additional dependencies to account for the phenomenon of electroporation, and solved numerically. Thesis comprises five peer-reviewed papers describing electroporation in the food industry, model creation for the problem of diffusion, translation of the model to the mathematically-related case of juice expression, model validation, as well as suggestions for possible future development, extension, and generalization. An additional chapter is dedicated to transfer of heat in tissue.