Yes / The aim of this work was to investigate the possibility of covalent cross-linker-free, polyelectrolyte complex formation at the nanoscale between alginic acid (as sodium alginate, ALG) and protamine (PROT). Optimisation of the self-assembly conditions was performed by varying the type of polymer used, pH of component solutions, mass mixing ratio of the components and the speed and order of component addition on the properties of complexes. Homogenous particles with nanometric sizes resulted when an aqueous dispersion of ALG was rapidly mixed with a solution of PROT. The polyelectrolyte complex between ALG and PROT was confirmed by infrared spectroscopy. To facilitate incorporation of drugs soluble at low pH, pH of ALG dispersion was decreased to 2; however, no nanoparticles (NPs) were formed upon complexation with PROT. Adjusting pH of PROT solution to 3 resulted in the formation of cationic or anionic NPs with a size range 70–300 nm. Colloidal stability of selected alginic acid low/PROT formulations was determined upon storage at room temperature and in liquid media at various pH. Physical stability of NPs correlated with the initial surface charge of particles and was time- and pH-dependent. Generally, better stability was observed for anionic NPs stored as native dispersions and in liquids covering a range of pH. / This study was funded by Merrion Pharmaceuticals Ireland. This work was also supported by the Synthesis and Solid State Pharmaceutical Centre funded by the Science Foundation Ireland under grant number 12/RC/2275.

No / This work investigates a new type of polyelectrolyte complex nanocarrier composed of hyaluronic acid (HA) and protamine (PROT). Small (approximately 60 nm) and negatively charged nanoparticles (NPs) with a polydispersity index of less than 0.2 were obtained with properties that were dependent on the mixing ratio, concentration of polyelectrolytes and molecular weight of HA. Salmon calcitonin (sCT) was efficiently (up to 100%) associated with the NPs, and the drug loading (9.6-39% w/w) was notably high, possibly due to an interaction between HA and sCT. The NPs released ~70-80% of the sCT after 24 hours, with the estimated total amount of released sCT depending on the amount of HA and PROT present in the NPs. The isoelectric point of the NPs was close to pH 2, and the negative surface charge was maintained above this pH. The HA/PROT nanoplexes protected the sCT from enzymatic degradation and showed low toxicity to intestinal epithelial cells, and thus may be a promising oral delivery system for peptides.

Nous avons cherché dans ce travail à élaborer un biofilm artificiel électroactif dans le but de promouvoir les réactions de transfert extracellulaire d’électrons (EET) en reconstituant artificiellement un biofilm en présence de matériaux exogènes. Un matériau composite auto-assemblé constitué de cellules bactériennes (Shewanella oneidensis), de nanotubes de carbone et de cytochromes c exogènes (issue de cellules de cœur de bœuf) a été tout d’abord proposé. Le processus d’auto-assemblage a été étudié par diffusion de lumière dynamique, microscopie électronique à balayage et spectroscopie Raman. Ces analyses ont mis en évidence l’importance du cytochrome exogène dans l’assemblage et l’organisation du matériau. La viabilité bactérienne a été étudiée et l’activité métabolique a été caractérisée par électrochimie. Les courants à l’anode étaient 10 et 4 fois plus importants avec ce biofilm artificiel (0,027 A m-2) qu’avec les électrodes modifiées par les bactéries seules (0,003 A m-2) ou associées au cytochrome c (0,007 A m-2). Le biofilm artificiel a été testé en substituant S. oneidensis par Pseudomonas fluorescens, produisant un courant d’oxydation lors de l’ajout de 1,5 mM de glucose. Le cytochrome c possède, outre son rôle structurant, une activité de navette à électrons. Son potentiel redox, 254 mV (vs NHE), était adapté à l’oxydation du formiate mais inadapté à la réduction du fumarate. Pour cette raison, il a été substitué par d’autres cytochromes (c3DvH, c7Da, c553DvH, c3DdN ou c3Dg) possédant des potentiels redox plus bas, de 20 mV à -400 mV. Ces cytochromes variaient aussi au niveau de leur charge à pH neutre, permettant de valider l’importance des forces électrostatiques dans l’assemblage du biocomposite. Les résultats optimaux obtenus avec c3DvH et c7Da ont montré l’importance du potentiel redox des éléments exogènes pour l’EET. Nous avons ensuite remplacé le cytochrome c par la protamine. Cette protéine non électroactive a permis l’assemblage du biocomposite tout en maintenant les transferts directs d’électrons entre les bactéries et les différents nanomatériaux testés. Les optimisations ont permis d’atteindre des courants cathodiques de plus de 12 A m-2 en présence de 50 mM de fumarate. Les expériences de stabilité ont montré la présence d’un courant biotique de 1,75 A m-2 après 24 h de réduction de 50 mM de fumarate / The aim of this PhD work was to design an artificial electroactive biofilm in order to optimize extracellular electron transfers (EET) by artificially reconstituting the biofilm in the presence of exogenous materials. A biocomposite material was proposed from the self-assembly of the bacteria Shewanella oneidensis with carbon nanotubes and cytochrome c (extract from bovine heart). The self-assembly was first studied by diffusion light scattering, scanning electron microscopy and Raman spectroscopy. These analyzes showed the importance of the cytochrome c in the assembly and organization of the biocomposite. Bacterial viability was studied and metabolic activity was characterized with the help of electrochemistry. The current at the anode was 10 and 4 times higher with the artificial biofilm (0.027 A m2) than with film composed with bacteria alone (0.003 A m2) or associated with cytochrome c (0.007 A m2). Artificial biofilm was also tested with Pseudomonas fluorescens instead of S. oneidensis, producing an oxidative current upon the addition of 1.5 mM glucose. That indicates cytochrome c has, in addition to its structuring role, an electron shuttle activity. Its redox potential, +254 mV (vs. NHE), was adapted to the oxidation of formate but was unsuitable for the reduction of fumarate. For this reason, it has been substituted by other cytochromes, c3DvH, c7Da, c553DvH, c3DdN, and c3Dg, possessing lower redox potentials, in the range of 20 mV to -400 mV. These cytochromes also varied at the level of their charge at neutral pH and allowed to validate the importance of the electrostatic forces in the assembly of the biocomposite. The optimal results obtained with c3DvH and c7Da showed the importance of the redox potential of the exogenous elements for the EET. We then replaced the cytochrome c with protamine. This non-electroactive protein allowed the assembly of the biocomposite by promoting direct electrons transfer between the bacteria and the different nanomaterials tested. The optimizations made it possible to reach cathodic currents of more than 12 A m2 in the presence of 50 mM of fumarate. The stability experiments showed the presence of a biotic current of 1.75 A m2 after 24 h of reduction of 50 mM of fumarate

La réponse immune sous héparine (H) est associée à la synthèse d’anticorps (Ac) d’isotype IgG dirigés contre le facteur plaquettaire 4 (FP4) modifié par l’héparine. Ces anticorps se fixent par leur fragment Fc aux récepteurs FcγRIIa des plaquettes et induisent une forte activation plaquettaire. Les héparines de bas poids moléculaire sont constituées d’un mélange hétérogène d’oligosaccharides (OS) dont la structure varie en fonction de leur nombre de sucres et de groupements sulfates. Nous avons montré que seuls les OS ayant dix groupements sulfates ou plus, peuvent modifier le FP4 et permettre la fixation des Ac héparine-dépendants. La chirurgie cardiaque est associée à une forte activation plaquettaire et les patients sont exposés à de fortes concentrations d’héparine qui est neutralisée en fin d’intervention par le sulfate de protamine (SP). Alors que 30 à 50 % d’entre eux développent des Ac anti H/FP4 nous avons montré que 25% développent également des Ac dirigés contre les complexes H/SP et que ces Ac sont capables in vitro d’induire une activation plaquettaire. Le rôle de ces Ac in vivo reste cependant discuté. / The immune response under heparin (H) treatment is associated with IgG antibodies (Abs) synthesis against heparin-modified Platelet Factor 4 (PF4). These Abs bind FcγRIIa receptors via their Fc fragment and promote strong platelet activation. Low Molecular Weight Heparins are complex mixtures of polysaccharide fragments. These oligosaccharides (OS) have a variable structure due to variations in the type of sugar units and the number of sulphate groups. We demonstrated that OS longer than 10 saccharides and with a large number of sulphate groups are likely able to modify PF4 and allow the binding of heparin-dependent Abs. Cardiac surgery is associated with strong platelet activation and high doses of unfractionated heparin are administered to patients during surgery, and then neutralized with protamine sulfate (SP) at the end of the intervention. 30 to 50% of patients develop anti H/PF4 Abs, but we demonstrated that 25% do synthethized anti H/SP Abs able to activate platelets in vitro. The pathogenic role of these Abs to H/SP in vivo is controversial.

The bio-enabled syntheses of functional nano-structured metal oxide thin films is of importance for a range of applications, in photonics, electronics, sensing, cell engineering, and biochemical devices. This type of novel syntheses method can overcome problems common in conventional oxide processing. In general, conventional oxide processes often require thermal treatment, caustic chemicals, and mechanical processing when producing shape-controlled inorganic materials. In contrast, biological processes are usually carried out under mild conditions (low temperature, neutral pH, and atmospheric pressure) and are therefore promising for the development of benign processes. Functional materials synthesized at room temperature using biomolecules are promising due to their expediency. During recent years, significant discoveries and progress have been made in discovering, and finding new applications for such biomimetic oxide-based minerals. However, much of the research has focused on SiO- and TiO-bearing organic-inorganic hybrid materials, of which a significant limitation is that, there are relatively few water-soluble inorganic oxide precursors commercially available for such biological syntheses. Two common compounds that are used in the biomimetic syntheses of SiO₂ and TiO₂ are tetramethoxisilane (TMOS) and Ti(IV) -bis(ammonium lactato) dihydroxide ( TiBALDH ). As a result, approaches to synthesize new water-soluble transitional metal complexes for use as precursors in the biomineralization of the corresponding functional metal oxide thin films were explored in this work, in order to expand the range of functional oxide chemistries formed via bio-enabled methods. A Ti-containing compound was synthesized to compare the behavior of commercially-available and as-synthesized TiBALDH. Another titanium-containing complex with citrate ligands, instead of lactate, was also synthesized to investigate the influence of the ligand type on the deposition behavior of the precursors. Zirconium- and hafnium-containing complexes were also synthesized to demonstrate the feasibility and versatility of the idea of applying bio-enabled syntheses to the fabrication of functional mineral oxides other than the reported SiO₂ and TiO₂. The second part of this thesis focuses on developing a novel way to fabricate porous functional mineral oxide thin films with controlled pore size, which can be used in a variety of applications, such as dye loading for optical, photochemical, or electrochemical purposes. Commercially-available, carboxyl-group-terminated polystyrene spheres of different sizes were utilized as pore-size controllers in the bio-enabled syntheses of TiO₂ by protamine. This approach has been found to be an effective means of creating uniform pores in inorganic mineral oxide coatings. The accomplishments of this work have the potential to be integrated so as to expand the boundaries of biomineralization in materials science and engineering fields.

Foi estudado a influência das estações não reprodutiva e reprodutiva, dos crioprotetores glicerol e etilenoglicol e do processo de congelação e descongelação sobre a motilidade, o vigor, a morfologia e o complexo DNA-proteína de espermatozóides em garanhões, comparando o sêmen fresco, o exposto a congelação e descongelação sem crioprotetores, o exposto aos crioprotetores sem congelação e o exposto aos crioprotetores com congelação e descongelação. Foram utilizados seis garanhões da raça Mangalarga Paulista, colhendo 12 ejaculados de cada animal na estação não reprodutiva (1) e 12 ejaculados na estação reprodutiva (2), analisando a motilidade, o vigor, a concentração, a morfologia e a patologia do complexo DNA-Proteína. A patologia do complexo DNA-Proteína foi avaliada em sêmen fixado com etanol-ácido-acético glacial 3:1 (v/v), tratado com HCL 4N a 25oC e corado com azul de toluidina a 0,025% em tampão Mcllvaine, empregando microscopia óptica com aumento de 1000x. Os resultados mostraram que a motilidade, o vigor, a morfologia e a anomalia do complexo DNA-Proteína dos espermatozóides diferem entre os grupos congelado e não congelado (P<0,05). Para o grupo fresco, a taxa de patologia do complexo DNA-Proteína apresentou diferença significativa (P<0,05) entre as estações 1 e 2. O processo de congelação e descongelação exerce influência negativa sobre o complexo DNA-Proteína de espermatozóides em garanhões. / To study the effects of freezing and thawing on DNA-protein complexes in spermatozoa, 12 ejaculate were collected from each of 6 stallions (Mangalarga Paulista breed) in each of two consecutive breeding seasons. Motility, vigor, concentration, morphology and incidence of the DNA-protein complex pathologies of spermatozoa were evaluated and compared among fresh semen, semen expose to freezing and thawing without cryoprotectants and semen exposed to the cryoprotectors glycerol and ethylene glycol left at room temperature or frozen. Incidence of the DNA-protein complex pathologies was evaluated in semen smear fixed in na ethanol-acetic-acid mixture (3:1, v/v) for 1 minute, washed in 70% ethanol for 3 minutes and air dried. To induce nuclear metachromasy, smears were treated with 4N HCL at 25ot for 20 minutes followed by rinsing in distilled water. Preparation were stained with a 0.025% toluidine blue solution in Mailvaine buffer for 15 minutes. Frequency of spermatozoa exhibiting nuclear metachromasy was determined in 1000 cells/animal by light microscopy at 1000X magnification. Motility, vigor, morphology and DNA-protein complex pathologies of spermatozoa were different for semen frozen compared to not frozen (P<0.05). For fresh semen, there were effects of seasons on the incidence of DNA-protein complex pathologies (P<0.05) For semen frozen without cryoprotectants there were significant effects seasons (P<0.05) The process of cryopreservation and thawing influences negatively the DNA-protein complexes in stallion spermatozoa.

A fragmentação do DNA espermático é uma das principais causas de infertilidade nos machos. Alterações na integridade do DNA podem ser decorrentes da ação de espécies reativas de oxigênio (EROS), de defeitos na protaminação e da apoptose. A sensibilidade do espermatozoide ovino frente as biotecnologias reprodutivas pode ser resultado de uma alta suscetibilidade a ação de EROS ou alterações na protaminação espermática desencadeadas por estresse oxidativo induzido por estresse térmico, tornando o espermatozoide mais suscetível a fragmentação de DNA. Com o objetivo de entender mais este processo, foi realizado um primeiro experimento para avaliar o status oxidativo, os atributos espermáticos e a expressão gênica de proteínas envolvidas nos processos de protaminação em diferentes níveis de suscetibilidade a peroxidação lipídica (baixo, médio, alto e altíssimo) em sêmen ovino. Foi observado um aumento da atividade enzimática da glutationa peroxidase e uma diminuição da atividade enzimática da glutationa redutase no plasma seminal no grupo com suscetibilidade a peroxidação lipídica alta e altíssima. Com relação a catalase, não foi verificado esse aumento, no entanto houve maior imunodetecção desta enzima. Em relação a condição espermática, observou-se um aumento na porcentagem de defeitos totais e lesões nas membranas acrossomal e plasmática, além de porcentagens menores de espermatozoides com baixo potencial de membrana mitocondrial no grupo com maior suscetibilidade a peroxidação lipídica. Este mesmo grupo também apresentou alta suscetibilidade ao dano da cromatina e aumento do número de cópias do gene da protamina 1 (PRM1) em espermatozoides. O segundo experimento avaliou os atributos de espermatozoides provenientes do ejaculado e do epidídimo frente ao estresse térmico induzido por insulação testicular (tratado), assim como as relações com o status antioxidante. Observou-se diminuição da motilidade, vigor, turbilhonamento e aumento na porcentagem de defeitos maiores e menores, e de lesões na membrana acrossomal e plasmática em espermatozoides ejaculados no grupo tratado. Essas diferenças não foram observadas em espermatozoides epididimais. Uma maior atividade enzimática da glutationa peroxidase e da glutationa redutase foi observada no plasma seminal do grupo tratado. Foi verificado uma diminuição de espermatozoides com alto potencial de membrana mitocondrial no grupo tratado, indicando que o metabolismo mitocondrial parece estar envolvido no quadro de estresse oxidativo. Um terceiro estudo foi conduzido para verificar o efeito do estresse térmico na integridade da cromatina espermática, na protaminação do DNA espermático e na ativação de vias apoptóticas em testículo ovino. Em espermatozoides provenientes do ejaculado, houve um aumento da porcentagem de células com suscetibilidade a fragmentação da cromatina no grupo tratado; não observado em espermatozoides epididimais. Uma alta porcentagem de espermatozoides com fragmentação de DNA grau III (ensaio COMETA) e aumento do número de cópias de mRNA da proteína de transição 1 (TNP1) em espermatozoides provenientes do ejaculado, foi observada no grupo tratado. Já em espermatozoides provenientes do epidídimo, a PRM1 apresentou maior expressão no 30&omicron; dia do ciclo espermático comparado a 7&omicron; dia, enquanto que a TNP1 comportou-se de maneira contrária. Em relação a ativação de vias apoptóticas em testículo ovino, a proteína anti-apoptótica Bax foi imuno-identificada em espermatócitos e a Blc-2 em espermátides, sem diferença entre os grupos. Em conclusão, a alta susceptibidade dos espermatozoides ovinos a peroxidação lipídica altera o status oxidativo ocasionando um quadro de estresse oxidativo, principal causador de dano a cromatina. Adicionalmente, o estresse oxidativo induzido por estresse térmico prejudica os atributos espermáticos e aumenta a suscetibilidade dos espermatozoides a fragmentação de DNA. / Sperm DNA fragmentation is referred as one of the main causes of male\'s infertility. Among the etiologies of abnormalities on DNA integrity the action of reactive oxygen species (ROS), protamination failures and apoptosis are considered the most important. The known sensitivity of ram´s sperm to reproductive biotechnologies could be a result of a higher susceptibility to the action of ROS or changes in sperm protamination triggered by oxidative stress induced by heat stress. This would increase the susceptibility of sperm DNA to fragmentation. Initially, the ram sperm quality, seminal protamine gene expression and oxidative status were evaluated in semen samples of different levels of susceptibility to lipid peroxidation (low, medium, high and very high). There was an increase on glutathione peroxidase and decreased glutathione reductase enzymes&#39; activity in groups with high and very high susceptibility to lipid peroxidation. However, only catalase showed increased immunodetection. An increase on total defects and damaged acrosomal and plasmatic membranes were observed in the group showing the highest susceptibility to lipid peroxidation. Also, the percentage of sperm with low mitochondrial membrane potential, the percentage of sperm susceptible to chromatin damage and the number of copies of protamine 1 (PRM1) mRNA were increased in the group showing higher susceptibility to lipid peroxidation. The second study evaluated sperm\'s attributes from the epididymis and ejaculated sperm subjected to heat stress induced by testicular insulation (treated group), as well as correlations with the antioxidant status. We observed decrease on motility, vigor, and mass motility and increase on the percentages of sperm showing major and minor defects, and damaged plasma and acrosome membranes in the treated group. These differences were not observed in epididymal sperm. Increased enzymatic activities of glutathione peroxidase and glutathione reductase were observed in the treated group. Mitochondrial metabolism appeared to be involved in the oxidative homeostasis imbalance. This was effectively observed by a decrease on the percentage of sperm with high mitochondrial membrane potential in the treated group. A third study was conducted to determine the effect of heat stress induced by testicular insulation on the integrity of chromatin, protamination and apoptotic activation pathway in ram testis. An increase on the percentage of sperm with susceptibility to chromatin fragmentation in the treated group was observed. However, the previous findings were not observed in epididymal sperm. A higher percentage of sperm showing DNA fragmentation level III (Comet assay) and an increase on the number of copies of transition protein 1(TNP1) mRNA were observed in the treated group. In epididymal sperm, a higher expression of the PMR1 gene was observed on the 30th day of the espermatogenic cycle, while TNP1 behaved contrarily. In the testicular samples, the anti-apoptotic protein Bax was detected only in spermatocytes while Bcl-2 was observed singularly in spermatids, with no difference between groups. In conclusion, the disruption of oxidative homeostasis may be exacerbated by the higher susceptibility of ram\'s sperm to lipid peroxidation, which could be the main etiology of chromatin damage. In addition, oxidative stress induced by heat stress impairs sperm attributes and DNA integrity.

A fragmentação do DNA espermático é uma das principais causas de infertilidade nos machos. Alterações na integridade do DNA podem ser decorrentes da ação de espécies reativas de oxigênio (EROS), de defeitos na protaminação e da apoptose. A sensibilidade do espermatozoide ovino frente as biotecnologias reprodutivas pode ser resultado de uma alta suscetibilidade a ação de EROS ou alterações na protaminação espermática desencadeadas por estresse oxidativo induzido por estresse térmico, tornando o espermatozoide mais suscetível a fragmentação de DNA. Com o objetivo de entender mais este processo, foi realizado um primeiro experimento para avaliar o status oxidativo, os atributos espermáticos e a expressão gênica de proteínas envolvidas nos processos de protaminação em diferentes níveis de suscetibilidade a peroxidação lipídica (baixo, médio, alto e altíssimo) em sêmen ovino. Foi observado um aumento da atividade enzimática da glutationa peroxidase e uma diminuição da atividade enzimática da glutationa redutase no plasma seminal no grupo com suscetibilidade a peroxidação lipídica alta e altíssima. Com relação a catalase, não foi verificado esse aumento, no entanto houve maior imunodetecção desta enzima. Em relação a condição espermática, observou-se um aumento na porcentagem de defeitos totais e lesões nas membranas acrossomal e plasmática, além de porcentagens menores de espermatozoides com baixo potencial de membrana mitocondrial no grupo com maior suscetibilidade a peroxidação lipídica. Este mesmo grupo também apresentou alta suscetibilidade ao dano da cromatina e aumento do número de cópias do gene da protamina 1 (PRM1) em espermatozoides. O segundo experimento avaliou os atributos de espermatozoides provenientes do ejaculado e do epidídimo frente ao estresse térmico induzido por insulação testicular (tratado), assim como as relações com o status antioxidante. Observou-se diminuição da motilidade, vigor, turbilhonamento e aumento na porcentagem de defeitos maiores e menores, e de lesões na membrana acrossomal e plasmática em espermatozoides ejaculados no grupo tratado. Essas diferenças não foram observadas em espermatozoides epididimais. Uma maior atividade enzimática da glutationa peroxidase e da glutationa redutase foi observada no plasma seminal do grupo tratado. Foi verificado uma diminuição de espermatozoides com alto potencial de membrana mitocondrial no grupo tratado, indicando que o metabolismo mitocondrial parece estar envolvido no quadro de estresse oxidativo. Um terceiro estudo foi conduzido para verificar o efeito do estresse térmico na integridade da cromatina espermática, na protaminação do DNA espermático e na ativação de vias apoptóticas em testículo ovino. Em espermatozoides provenientes do ejaculado, houve um aumento da porcentagem de células com suscetibilidade a fragmentação da cromatina no grupo tratado; não observado em espermatozoides epididimais. Uma alta porcentagem de espermatozoides com fragmentação de DNA grau III (ensaio COMETA) e aumento do número de cópias de mRNA da proteína de transição 1 (TNP1) em espermatozoides provenientes do ejaculado, foi observada no grupo tratado. Já em espermatozoides provenientes do epidídimo, a PRM1 apresentou maior expressão no 30&omicron; dia do ciclo espermático comparado a 7&omicron; dia, enquanto que a TNP1 comportou-se de maneira contrária. Em relação a ativação de vias apoptóticas em testículo ovino, a proteína anti-apoptótica Bax foi imuno-identificada em espermatócitos e a Blc-2 em espermátides, sem diferença entre os grupos. Em conclusão, a alta susceptibidade dos espermatozoides ovinos a peroxidação lipídica altera o status oxidativo ocasionando um quadro de estresse oxidativo, principal causador de dano a cromatina. Adicionalmente, o estresse oxidativo induzido por estresse térmico prejudica os atributos espermáticos e aumenta a suscetibilidade dos espermatozoides a fragmentação de DNA. / Sperm DNA fragmentation is referred as one of the main causes of male\'s infertility. Among the etiologies of abnormalities on DNA integrity the action of reactive oxygen species (ROS), protamination failures and apoptosis are considered the most important. The known sensitivity of ram´s sperm to reproductive biotechnologies could be a result of a higher susceptibility to the action of ROS or changes in sperm protamination triggered by oxidative stress induced by heat stress. This would increase the susceptibility of sperm DNA to fragmentation. Initially, the ram sperm quality, seminal protamine gene expression and oxidative status were evaluated in semen samples of different levels of susceptibility to lipid peroxidation (low, medium, high and very high). There was an increase on glutathione peroxidase and decreased glutathione reductase enzymes&#39; activity in groups with high and very high susceptibility to lipid peroxidation. However, only catalase showed increased immunodetection. An increase on total defects and damaged acrosomal and plasmatic membranes were observed in the group showing the highest susceptibility to lipid peroxidation. Also, the percentage of sperm with low mitochondrial membrane potential, the percentage of sperm susceptible to chromatin damage and the number of copies of protamine 1 (PRM1) mRNA were increased in the group showing higher susceptibility to lipid peroxidation. The second study evaluated sperm\'s attributes from the epididymis and ejaculated sperm subjected to heat stress induced by testicular insulation (treated group), as well as correlations with the antioxidant status. We observed decrease on motility, vigor, and mass motility and increase on the percentages of sperm showing major and minor defects, and damaged plasma and acrosome membranes in the treated group. These differences were not observed in epididymal sperm. Increased enzymatic activities of glutathione peroxidase and glutathione reductase were observed in the treated group. Mitochondrial metabolism appeared to be involved in the oxidative homeostasis imbalance. This was effectively observed by a decrease on the percentage of sperm with high mitochondrial membrane potential in the treated group. A third study was conducted to determine the effect of heat stress induced by testicular insulation on the integrity of chromatin, protamination and apoptotic activation pathway in ram testis. An increase on the percentage of sperm with susceptibility to chromatin fragmentation in the treated group was observed. However, the previous findings were not observed in epididymal sperm. A higher percentage of sperm showing DNA fragmentation level III (Comet assay) and an increase on the number of copies of transition protein 1(TNP1) mRNA were observed in the treated group. In epididymal sperm, a higher expression of the PMR1 gene was observed on the 30th day of the espermatogenic cycle, while TNP1 behaved contrarily. In the testicular samples, the anti-apoptotic protein Bax was detected only in spermatocytes while Bcl-2 was observed singularly in spermatids, with no difference between groups. In conclusion, the disruption of oxidative homeostasis may be exacerbated by the higher susceptibility of ram\'s sperm to lipid peroxidation, which could be the main etiology of chromatin damage. In addition, oxidative stress induced by heat stress impairs sperm attributes and DNA integrity.

Foi estudado a influência das estações não reprodutiva e reprodutiva, dos crioprotetores glicerol e etilenoglicol e do processo de congelação e descongelação sobre a motilidade, o vigor, a morfologia e o complexo DNA-proteína de espermatozóides em garanhões, comparando o sêmen fresco, o exposto a congelação e descongelação sem crioprotetores, o exposto aos crioprotetores sem congelação e o exposto aos crioprotetores com congelação e descongelação. Foram utilizados seis garanhões da raça Mangalarga Paulista, colhendo 12 ejaculados de cada animal na estação não reprodutiva (1) e 12 ejaculados na estação reprodutiva (2), analisando a motilidade, o vigor, a concentração, a morfologia e a patologia do complexo DNA-Proteína. A patologia do complexo DNA-Proteína foi avaliada em sêmen fixado com etanol-ácido-acético glacial 3:1 (v/v), tratado com HCL 4N a 25oC e corado com azul de toluidina a 0,025% em tampão Mcllvaine, empregando microscopia óptica com aumento de 1000x. Os resultados mostraram que a motilidade, o vigor, a morfologia e a anomalia do complexo DNA-Proteína dos espermatozóides diferem entre os grupos congelado e não congelado (P<0,05). Para o grupo fresco, a taxa de patologia do complexo DNA-Proteína apresentou diferença significativa (P<0,05) entre as estações 1 e 2. O processo de congelação e descongelação exerce influência negativa sobre o complexo DNA-Proteína de espermatozóides em garanhões. / To study the effects of freezing and thawing on DNA-protein complexes in spermatozoa, 12 ejaculate were collected from each of 6 stallions (Mangalarga Paulista breed) in each of two consecutive breeding seasons. Motility, vigor, concentration, morphology and incidence of the DNA-protein complex pathologies of spermatozoa were evaluated and compared among fresh semen, semen expose to freezing and thawing without cryoprotectants and semen exposed to the cryoprotectors glycerol and ethylene glycol left at room temperature or frozen. Incidence of the DNA-protein complex pathologies was evaluated in semen smear fixed in na ethanol-acetic-acid mixture (3:1, v/v) for 1 minute, washed in 70% ethanol for 3 minutes and air dried. To induce nuclear metachromasy, smears were treated with 4N HCL at 25ot for 20 minutes followed by rinsing in distilled water. Preparation were stained with a 0.025% toluidine blue solution in Mailvaine buffer for 15 minutes. Frequency of spermatozoa exhibiting nuclear metachromasy was determined in 1000 cells/animal by light microscopy at 1000X magnification. Motility, vigor, morphology and DNA-protein complex pathologies of spermatozoa were different for semen frozen compared to not frozen (P<0.05). For fresh semen, there were effects of seasons on the incidence of DNA-protein complex pathologies (P<0.05) For semen frozen without cryoprotectants there were significant effects seasons (P<0.05) The process of cryopreservation and thawing influences negatively the DNA-protein complexes in stallion spermatozoa.

During spermiogenesis, somatic chromatin is remodeled and a vast majority (> 90%) of DNA histones are replaced by short arginine-rich peptides called protamines. This compaction is immense, with protamine-DNA self-assembly in sperm chromatin resulting in a final volume roughly 1/6th of a somatic nucleus. This near crystalline organization of the DNA in sperm is thought crucial both for the transport of the paternal genes as well as for the protection of genetic information as sperm chromatin is transcriptionally inactive and all DNA repair mechanisms are shut down. Chapter 1 will include an overview of the topics discussed in this document, including: sperm chromatin, Sperm chromatin remodeling, DNA damage, and the effect of DNA damage to sperm DNA. Chapter 2 will contain a brief overview of the techniques used within this study. This includes: Small-angle X-ray Scattering, gel electrophoresis, DNA precipitation assays, and ethidium bromide dissociation assays. In chapter 3, we will discuss the effect of DNA packaging on the accessibility of free radicals to damage condensed DNA. A variety of polycations were used to condense plasmid DNA in reconstituted samples. After condensation, the DNA-polycation condensates were exposed to 2,2'-Azobis(2-amidinopropane) dihydrochloride (AAPH) for 1 hour, decondensed, and the plasmid DNA examined by gel electrophoresis. By comparing the intensities of the supercoiled, open coiled and linear bands, we were able to identify the presence of single-strand nicks and double-strand breaks in DNA. DNA packaging densities for all polycation-DNA systems were determined by small-angle X-Ray scattering (SAXS). Our results show that for similar length polycations, the amount of oxidative damage scales directly with the DNA packaging with more tightly condensed DNA being damaged less. However, our results also show that DNA damage is also dependent on polycation length, with DNA condensed by shorter polycations being damaged more than DNA condensed with longer polycations even at similar packaging densities. Protamine has long been thought to play a role in protecting spermatic DNA from damaging agents in vivo. However, the relationship between the hypercondensation of sperm chromatin, the DNA integrity, and the transfer of epigenetic information from sperm to oocyte and potential to alter gene expression in the early embryo are poorly understood. In Chapter 4, we examine how underprotamination affects free radical accessibility and DNA stability in reconstituted sperm chromatin. Specifically, reconstituted salmon protamine- plasmid DNA condensates (polyplexes) were formed at precise protamine/DNA ratios and subsequently subjected to exposure to AAPH free radicals. Agarose gel electrophoresis was then used to assess DNA damage by observing topology alternations in the decondensed polyplexes. FPG-DNA glycosylase has also been used to more accurately determine oxidative damage beyond just nicks and double-strand breaks in the various condensed states. We show that higher levels of protamination correlate to greater levels of protection to the DNA from oxidative damage up until full charge compensation. Furthermore, we also demonstrate that poorly compacted chromatin could be recovered by the introduction of small cationic peptides in underprotaminated condensates as well as actual sperm nuclei. SAXS studies were performed to show that the introduction of cationic peptides resulted in tighter DNA packaging densities in the underprotaminated sperm chromatin. In Chapter 5, we examine the role of disulfide bonds on DNA packaging in mammalian sperm chromatin. Mammalian protamine, unlike fish, are known to have cysteine residues capable of forming inter- and intra-protamine disulfide bonds. In bull, prior work had shown evidence for the formation of a unique hairpin secondary structure due to the folding of the ends of the protamine molecule by intramolecular disulfide linkages. Between folds is an arginine-rich region known as the DNA binding region. The DNA binding region has a local arginine fraction (~60-75%) that is much higher than the arginine fraction within the full bull protamine sequence (~50%). Previous work by the DeRouchey lab has shown that the percent arginine was crucial for DNA condensation in small arginine-rich peptides. We hypothesize that the fraction of arginine is also critical to DNA remodeling in sperm chromatin. SAXS studies showed that disulfide bond reduction resulted in complete decondensation of bull sperm nuclei. Here, we have used cysteine alkylation chemistry to add neutral or charged functional groups to the protamine cysteine, thereby inhibiting the formation of these disulfide bonds. This chemistry both prevents the formation of the hairpin as well as modifies the overall charge of the protamine. Through ethidium bromide exclusion assays, we measured binding of these altered protamines to calf thymus DNA and determined that a percent cationic charge of above 50% is necessary for the protamine to effectively condense DNA. In addition, we show that DNA condensation of bull protamine with the hairpin is nearly identical to piscine protamines which have no disulfide linkages but a net arginine fraction of 60-75%. Upon disruption of the hairpin, however, complete condensation does not occur despite a net charge on the protamine of +26.