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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
171

Resistência de união à dentina erodida e erodido-abrasionada em função da aplicação de clorexidina para controle do desgaste / Bond strength to eroded and eroded-abraded dentin depending on the application of chlorhexidine for the control of tooth wear

Liberatti, Giovanni Aguirra 04 February 2019 (has links)
O estabelecimento de interfaces adesivas no substrato dentinário artificialmente erodido, conceitualmente pobre em minerais, revestido por matriz orgânica exposta, é pouco promissor. Por ora, tornam-no similar àquele verificado para a dentina normal/hígida apenas a asperização ou, quando do uso de adesivos universais, a desproteinização com hipoclorito de sódio. Manter a camada de fibrilas colágenas, por meio do uso de inibidores de proteinases, talvez mesmo que compactada por abrasão, pode, porém, ser conveniente, já que desempenha importante papel nos processos de des e remineralização, inclusive contendo a progressão do desgaste erosivo e erosivo-abrasivo, e no estabelecimento de uma camada híbrida propriamente dita. Avaliou-se, pois, de imediato, a resistência de união do conjunto sistema adesivo condicione e lave simplificado-resina composta à dentina, considerando-se como fatores experimentais a condição desse substrato, em três níveis (N: normal; E: erodido; EA: erodido-abrasionado), e a aplicação de um gel para prevenção/controle do desgaste erosivo em três níveis (C: controle/sem aplicação; P: placebo/sem princípio ativo; CHX: digluconato de clorexidina a 0,12%). Para determinação do substrato normal, a dentina superficial oclusal de terceiros molares foi apenas submetida à ação de uma lixa de SiC (#600; 1 min; N); para a do erodido e do erodidoabrasionado, sequencialmente, de pronto, a desafio erosivo inicial (Coca-Cola®; 5 min). Aplicou-se sobre ela, então, ou não (controle/sem aplicação), um dos géis: placebo/sem princípio ativo; ou à base de CHX a 0,12%. Aquela de início desmineralizada ainda foi submetida à ciclagem de pH (Coca-Cola®; imersões de 5 min, 3x/dia, 5 dias), determinando-se, fatidicamente, o substrato erodido (E), ou a ciclagem de pH associada a escovação (escova elétrica/dentifrício com flúor diluído em água, 2,5 N, 30 s, 2x/dia, após 1º e último desafios ácidos), determinando-se o substrato erodido-abrasionado (EA). Após condicionamento (H3PO4 a 37%; 15 s; lavagem 30 s; secagem com papel absorvente), o adesivo AdperTM Single Bond 2® foi aplicado em todos os espécimes e a porção coronária, reconstruída com a resina FiltekTM Z350®. Transcorridas 24 h (água destilada / 37?C), os espécimes foram seccionados em palitos e testados (?TBS; 0,5 mm/min). Os valores de RU obtidos foram organizados considerando-se cada dente como unidade experimental e os testes de Análise de Variância a 2 critérios e de Tukey, aplicados (?=0,05). Um dente extra para cada grupo foi tratado exatamente como os outros, mas o corante fluorescente rodamina B foi previamente adicionado (0,16 mg/mL) ao sistema adesivo para permitir a avaliação qualitativa da interface adesiva por meio de Microscopia Confocal de Varredura a Laser. Diferentemente da variável aplicação de géis para prevenção/controle do desgaste erosivo (p=0,359), a variável condição do substrato dentinário exerceu influência significante sobre os resultados (p<0,001). Ademais, não houve interação entre elas (p=0,856). Os valores imediatos de RU ao substrato erodido e ao erodido-abrasionado, equivalentes entre si, foram sempre inferiores àqueles ao substrato normal, independentemente da aplicação, ou não, do gel de CHX, ou placebo, para prevenção/controle do desgaste erosivo. No tocante ao padrão de fratura dos palitos testados, as falhas adesivas e mistas foram predominantes em relação às coesivas, independentemente se em dentina ou em resina. Quanto à análise qualitativa, nota-se que tags resinosos se manifestam em maior número e comprimento nos substratos submetidos a desafio erosivo inicial, ou seja, o erodido e o erodido-abrasionado, independentemente da aplicação de qualquer estratégia para controle da progressão do desgaste. Dentre eles, para o substrato erodido, há uma identificável camada escura subjacente à de adesivo propriamente dito, entre os tags resinosos, representação da menor concentração de material marcado por rodamina B. Para o substrato erodido-abrasionado, verifica-se camada híbrida devidamente expressa por anuviado vermelho subjacente à camada de adesivo, mais e menos espessa, respectivamente, que a estabelecida no substrato normal e erodido. Destarte, conclui-se que o gel de CHX não foi capaz de determinar, por meio da preservação/controle do desgaste erosivo, ou erosivo-abrasivo, substrato tão favorável à adesão com os materiais resinosos quanto o normal, mesmo que não o tenha desajudado ainda mais. / The establishment of adhesive interfaces on artificially eroded dentin substrate, conceptually poor in minerals, coated with an exposed organic matrix, is little promising. For the time being, only diamond bur surface roughening and deproteinization with sodium hypochlorite, when universal adhesives are used, make it similar to the obtained for normal/sound dentin. Maintaining the layer of collagen fibrils, using protease inhibitors, perhaps even when compressed by abrasion, may, however, be convenient, since it plays an important role in the demineralization and remineralization processes, including the erosive and erosive-abrasive wear progression, and in establishing a hybrid layer itself. The aim of this study was to evaluate, immediately, bond strength (BS) of an etch-and-rinse adhesive system plus a composite to dentin, considering the condition of its substrate in three levels (N: normal; E: eroded; EA: eroded-abraded), and the application of a gel for the prevention/control of the erosive wear in three levels (C: control / without application, P: placebo / without an active principle, and CHX: 0.12% chlorhexidine digluconate). To determine the normal substrate, occlusal dentin from third molars was subjected solely to the action of a SiC sandpaper (# 600; 1 min; N); to determine the eroded and eroded-abraded, it was sequentially, and readily, subjected to an initial erosive challenge (Coca-Cola®, 5 min). One of the gels were applied, or not (control / without application), on it: placebo / without active principle; or containing 0.12% CHX. The initial demineralized one was still submitted to a pH cycling (Coca-Cola®, immersions of 5 min, 3x /day, 5 days), determining the eroded substrate (E), or to the pH cycling associated to brushing (electric toothbrush/fluoride toothpaste diluted in water, 2.5 N, 30 s, 2x/day, after 1st and last acid challenges), determining the eroded-abraded substrate (EA). After acid-etching (37% H3PO4, 15 sec, 30 sec washing, drying with absorbent paper), Adper(TM) Single Bond 2® adhesive was applied to all specimens and resin composite buildups constructed with Filtek(TM)Z350®. After 24 h (distilled water / 37?C), specimens were sectioned in beams and tested (?TBS, 0.5 mm/min). BS values obtained were organized considering each tooth as an experimental unit and a twoway ANOVA and Tukey test, applied (?=0.05). An extra tooth for each group was treated exactly like the others, but rhodamine B fluorescent dye was previously added (0.16 mg / mL) to the adhesive system to allow qualitative evaluation of the adhesive interface by means of Confocal Laser Scanning Microscopy. Differently from the variable application of gels for prevention/control of erosive wear (p=0.359), the condition of the dentin substrate had a significant influence on the results (p<0.001). In addition, there was no interaction between them (p=0.856). Immediate BS values to eroded and eroded-abraded substrates, equivalent to each other, were always lower than that to the sound substrate, regardless of the application, or not, of the CHX or the placebo gel for prevention/control of erosive wear. Concerning the fracture pattern of the tested beams, adhesive and mixed failures were predominant in relation to the cohesive, regardless of whether in dentin or in resin composite. As for the qualitative analysis, it is noticed that resinous tags are manifested in greater number and length in the substrates submitted to erosive initial challenge, that is, eroded and erodedabraded substrates, regardless of the application of any strategy to control progression of wear. Among them, for the eroded substrate, there is an identifiable dark layer underlying that of the adhesive itself, among the resin tags, representing the lowest concentration of material marked by rhodamine B. For the eroded-abraded substrate, hybrid layer is duly expressed by a red blur underlying the layer of adhesive, more and less thick than that established in the normal and eroded substrates, respectively. Therefore, it is concluded that the CHX gel was not able to determine, while preserving/controlling the erosive or erosive-abrasive wear, a substrate as favorable to bonding with resinous materials as a sound one, even if it has not impaired it even more.
172

Efeito do inibidor de proteinase de origem vegetal CrataBL, sobre a lesão pulmonar induzida pela elastase em camundongos C57/BI6 / Effect of vegetable proteinase inhibitor, CrataBL, on lung injury induced by elastase in mice C57/Bl6

Oliva, Leandro Vilela 28 April 2014 (has links)
O objetivo deste trabalho foi avaliar se a proteína bifuncional de planta, CrataBL, que tem lectina e as propriedades inibidoras de enzima, modula alterações de mecânica pulmonar, inflamatórias e remodelamento induzidas por elastase intratraqueal em camundongos. Métodos: 36 camundongos C57BL6 receberam elastase (0,025 mg) por instilação intratraqueal (grupo ELA e ELA-CrataBL). Os grupos controles receberam salina (grupo SAL e SAL-CrataBL). Os camundongos foram tratados com instilação intraperitoneal de CrataBL (2mg/kg) nos dias 1, 14 e 21 após a instilação intratraqueal de elastase (grupo SAL-CrataBL e ELA-CrataBL) os animais controle receberam salina no mesmo volume. No dia 28, os camundongos foram anestesiados, ventilados mecanicamente e foram analisados a resistência e elastância do sistema respiratório (Ers e Rrs), elastância e resistência tecidual (Htis e Gtis), resistência das vias aéreas (Raw) e óxido nítrico exalado (NOex). Após, o lavado broncoalveolar (LBA) foi realizado, os pulmões foram retirados e por morfometria, e foram quantificados o intercepto linear médio (Lm), a quantidade de neutrófilos, células positivas para TNF-alfa, fibras colágenas, elásticas, células positivas para MMP-9, MMP-12, TIMP-1, eNOS e iNOS e isoprostano no parênquima pulmonar e vias aéreas. No parênquima foram avaliados os macrófagos nos septos alveolares e nas vias aéreas, foram também avaliadas as células para MUC-5. Resultados: No grupo ELA houve um aumento na Ers, Raw, Gtis, Htis, Lm, NOex, nas células totais, macrófagos, neutrófilos, eosinófilos e linfócitos no LBA em relação aos controles (p < 0,05), sendo que Raw, diminuiu também nos grupos SAL-CrataBL e ELA-CrataBL. Nos grupos tratados com CrataBL houve uma diminuição de Ers (37,0±2,2 cmH2O/L), Htis (37,9±3,5 cmH2O/ml/s), ENO (14,7±0,7 ppb), comparativamente ao grupo ELA (p < 0,05). No LBA houve atenuação de neutrófilos (0,003±0,001 104células/ml), linfócitos (0,003±0,001 104células/ml) e de Lm (54,6±6,0 mm). Complementando a avaliação, no grupo que recebeu elastase houve um aumento no número de macrófagos (22,88 +- 2,24 células/104um2), neutrófilos (1,18 +- 0,15 células/10 4um2), células positivas para TNF-ala (12,52 +- 0,42 células/104um2) no parênquima pulmonar. Nas alterações de remodelamento no parênquima pulmonar, houve um aumento da proporção de volume de fibras colágenas (11,5 +- 0,11%), elásticas (0,5 +- 0,03%), na quantidade de células positivas para MMP-9 (18,59 +- 1,87 células/104?m2), MMP-12 (20,17 +- 1,92 células/104?m2), TIMP-1 (14,42 +- 2,05 células/104um2) em comparação com os controlos (p < 0,001). No estresse oxidativo, houve um aumento de eNOS (13,15 +- 0,40 células/104um2), iNOS (10,49 +- 0,65 células/104um2) e isoprostano (18,11 =- 5,38%). O tratamento CrataBL (grupo ELA-CrataBL) reduziu no parênquima pulmonar a quantidade de macrófagos (9,58 +- 1,36 células/104um2), neutrófilos (0,75 +- 0,1 células/104um2), células positivas para TNF-alfa (10.4±0,49 células/104?m2), fibras colágenas (10,8 +- 0,13%), elásticas (0,3 +- 0,02%), a quantidade de células positivas para a MMP-9 (10,35±0,65 células/104um2), MMP-12 (14,15±0,59 células/104um2), TIMP-1 (9,89 +- 2,79 células/104um2), MUC-5 (3,56 +- 0,54 células/104um2), eNOS (6.98 +- 0.32 células/104um2) e iNOS (6,21 +- 0,42 células/104um2) e isoprostano (8,96 +- 3,08 %) em relação ao grupo ELA (p < 0,001). Nas vias aéreas também ocorreu um aumento significativo de neutrófilos (5,97 +- 1,03 células/104um2), células positivas para TNF-alfa (15,82 +- 1,03 células/104um2). Nas alterações de remodelamento pulmonar nas vias aéreas também ocorreu um aumento da proporção de volume de fibras colágenas (8,73 +- 2,59%), elásticas (2,56 +- 0,18%), na quantidade de células positivas para MMP-9 (14,86 +- 1,77 células/104um2), MMP-12 (18,56 +- 1,79 células/104um2), TIMP-1 (1,31 +- 0,12 células/104um2) e MUC-5 (7,09 +- 1,71 células/104um2) em comparação com os controlos (p < 0,001). No estresse oxidativo, houve um aumento de células positivas para eNOS (3,09 +- 0,08 células/104um2), iNOS (5,4 +- 0,3 células/104um2) e isoprostano (18,11 +- 5,38%) em comparação com os controlos (p < 0,001). O tratamento CrataBL (grupo ELA-CrataBL) reduziu nas vias aéreas a quantidade de neutrófilos (4,62 +- 0,61 células/104um2), TNF- alfa (14,30 +- 1,28 células/104um2), fibras colágenas (7,80 +- 1,37%), elásticas (1,4 +- 0,13%), a quantidade de células positivas para a MMP-9 (9,93 +- 1,39 células/104um2), MMP-12 (12,06 +- 1,15 células/104um2), TIMP-1 (0,73 +- 0,05 células/104?m2), MUC-5 (3,56 +- 0,54 células/104um2), eNOS (1,89 +- 0,16 células/104um2) e iNOS (4,3 +- 0,31 células/104um2), isoprostano (7,34 +- 2,31%) em relação ao grupo ELA (p < 0,001). Conclusão: CrataBL atenua as alterações de mecânica pulmonar, lavado bronco alveolar, responsividade inflamatória, controle do remodelamento e estresse oxidativo induzidas pela elastase. Embora mais estudos devam ser realizados, esta proteína bifuncional pode contribuir como potencial ferramenta terapêutica para o tratamento da DPOC / The aim of this study was to evaluate whether the bifunctional protein plant, CrataBL, which has lectin and enzyme inhibitory properties, modulates changes in lung mechanics, inflammatory and remodeling induced by intratracheal elastase in mice.Methods : 36 C57/Bl6 mice received elastase (0.025 mg) by intratracheal (group ELA and ELA-CrataBL). Control groups received saline (group SAL and SAL-CrataBL).The mice were treated with intraperitoneal instillation of CrataBL (2mg/kg) on days 1, 14 and 21 after intratracheal instillation of elastase (group SAL-CrataBL and ELA-CrataBL), control animals received saline in the same volume. On day 28, the mice were anesthetized and mechanically ventilated were analyzed resistance and respiratory system elastance (Ers and Rrs), elastance and tissue resistance (Htis and Gtis), airway resistance (Raw) and exhaled nitric oxide (ENO). After the bronchoalveolar lavage (BAL) was performed, the lungs were removed and morphometry were quantified and the linear intercept mean (Lm), the number of neutrophils, positive cells for TNF-alfa, collagen fibers, positive cells for MMP-9, MMP-12, TIMP-1, eNOS, iNOS and isoprostane in lung parenchyma and airways. Parenchyma was also evaluated macrophages in the alveolar septa. Airway was also evaluated MUC-5 cells. Results: In group ELA was an increase in Ers, Raw, Gtis, Htis, Lm, ENO, in total cells, macrophages, neutrophils, eosinophils and lymphocytes in BAL compared to controls (p < 0.05), and Raw, decreased in both groups SAL-CrataBL and ELA-CrataBL. In the groups treated with CrataBL there was a decrease in Ers (37.0±2.2 cmH2O/L) Htis (37 9±3.5 cmH2O/ml/s) and ENO (14.7±0.7 ppb) compared to the ELA group (p < 0.05). In BAL there was attenuation of neutrophils (0.003±0.001 104cells/ml), lymphocytes (0.003±0.001 104cells/ml) and Lm (54.6±6.0 mm). Complementing the assessment, the group that received elastase was an increase in the number of macrophages (22.88±2.24 cells/104um2), neutrophils (1.18±0.15 cells/104um2), positive TNF-alfa cells (12.52±0.42 cells/104um2) in the lung parenchyma. In remodeling changes in lung parenchyma, there was an increase in the volume ratio of collagen fibers (11.5 ± 0.11%), elastic (0.5±0.03%), the number of positive MMP-9 cells (18.59±1.87 cells/104um2), MMP-12 (20.17 ± 1.92 cells/104um2) TIMP-1 (14.42±2.05 cells/104um2) compared to controls (p < 0.001). Oxidative stress, was an increased of eNOS (13.15±0.40 cells/104um2), iNOS (10.49 ± 0.65 cells/104um2) and isoprostane (18.11±5.38%). Treatment CrataBL (ELA-CrataBL group) reduced the amount of parenchymal lung macrophages (9.58±1.36 cells/104um2), neutrophils (0.75±0.1 cells/104um2), positive TNF-alfa cells (10.4±0.49 cells/104um2), collagen (10.8±0.13%), elastic (0.3±0.02%), the number of positive MMP-9 cells (10.35±0.65 cells/104?m2), MMP-12 (14.15±0.59 cells/104um2), TIMP-1 (9.89±2.79 cells/104um2) MUC-5 (3.56±0.54 cells/104um2), eNOS (6.98±0:32 cells/104um2) and iNOS (6.21±0.42 cells/104um2) and isoprostane (8.96 ± 3.08%) compared to group ELA (p < 0.001). Airway was also a significant increase in neutrophils (5.97±1.03 cells/104um2), positive TNF-alfa cells (15.82±1.03 cells/104um2). Changes in lung airway remodeling also occurred an increase in the volume ratio of collagen fibers (8.73±2.59%), elastic (2.56±0.18%), the number of positive MMP-9 cells (14.86±1.77 cells/104um2), MMP-12 (18.56±1.79 cells/104um2) TIMP-1 (1.31±0.12 cells/104um2) and MUC-5 (7.09±1.71 cells/104um2) compared to controls (p < 0.001). Oxidative stress, an increase of eNOS (3.09 ± 0.08 cells/104um2), iNOS (5.4±0.3 cells/104um2) and isoprostane (18.11±5.38%) compared to controls (p < 0.001). Treatment CrataBL (ELA-CrataBL group) reduced the amount airway neutrophils (4.62±0.61 cells/104um2), TNF-alfa (14.30 ± 1.28 cells/104um2), collagen fibers (7 80±1.37%), elastic (1.4±0.13%), the number of positive MMP-9 cells (9.93±1.39 cells/104um2), MMP-12 (12.06±1.15), TIMP-1 (0.73±0.05 cells/104um2), MUC-5 (3.56±0.54 cells/104um2), eNOS (1.89±0,16 cells/104um2) and iNOS (4.3±0.31 cells/104um2), isoprostane (7.34±2.31%) compared to group ELA (p < 0.001). Conclusion: CrataBL attenuates changes in lung mechanics, broncho alveolar inflammatory responsiveness, control remodeling and oxidative stress induced by elastase. Although more studies should be conducted, this bifunctional protein may contribute as a potential therapeutic tool for the treatment of COPD
173

Efeito do inibidor de proteinase de origem vegetal BbKl, sobre a lesão pulmonar induzida pela elastase em camundongos C57/Bl6 / Plant-derived proteinase inhibitor Bauhinia Bauhinioides Kallikrein Inhibitor (BbKI) attenuates elastase-induced emphysema in mice

Oliveira, Bruno Tadeu Martins de 07 December 2015 (has links)
Introdução: O desequilibrio protease-antiprotease é fundamental para a fisiopatologia da doença pulmonar obstrutiva crónica (DPOC). No entanto, poucos estudos para a inibição da elastase têm sido investigados. Objetivo: O nosso estudo avaliou a capacidade do inibidor proteinase derivada da planta Bauhinia bauhinioides (BbKI) na modulação da inflamação pulmonar induzida pela elastase. Métodos: Camundongos C57BL receberam instilação intratraqueal de elastase (0,025 mg, ELA n=6) ou solução salina (SAL n=6) e foram tratados por via intraperitoneal com BbKI (2 mg/kg, de ELA-BbKI n=6, SAL-BbKI n=6) nos dias 1, 14 e 21. No dia 28 foram realizadas as seguintes análises: (I) avaliação da mecânica pulmonar (II) medida do óxido nítrico exalado (ENO), (III) a determinação do número de céluas no lavado broncoalveolar (FLBA), e ( IV) coloração imunohistoquímica do fluído pulmonar, (V) intercepto linear médio (Lm), Resultados: Além de diminuir alterações mecânicas e a lesão do septo alveolar (Lm), BbKI reduziu o número de células no fluido de FLBA e diminuiu a expressão celular de TNF-alfa, MMP-9, MMP-12, TIMP-1, eNOS e iNOS em vias aéreas e nas paredes alveolares em comparação com o grupo de ELA (p < 0,05). BbKI diminuiu a proporção de volume de 8-iso-PGF2, as fibras colagenas e as elásticas nas vias aéreas e paredes alveolares em comparação com o grupo de ELA (p < 0,05). Houve redução do número de células para positivas MUC-5 nas paredes das vias aéreas (p < 0,05). Houve redução do número de neutrófilos em vias aereas e parenquima e de macrófagosnas paredes alveolares. Conclusão: BbKI foi eficaz na redução da inflamação pulmonar, mecânica pulmonar e do remodelamento da matriz extracelular induzida por elastase. BbKI pode ser uma ferramenta farmacológica potencial para o tratamento da DPOC; no entanto, são necessárias análises adicionais / Introduction: The protease-antiprotease imbalance is essential to the pathophysiology of chronic obstructive pulmonary disease (COPD). However, few studies for inhibition of elastase have been investigated. Objective: Our study evaluated the ability of proteinase inhibitor derived Bauhinia bauhinioides plant (BbKI) in modulating lung inflammation induced by elastase. Methods: Mice C57BL received intratracheal elastase instillation (0.025 mg, ELA n = 6) or saline (SAL n = 6) and were treated intraperitoneally with BbKI (2 mg/kg of ELA-BbKI n = 6, SAL-BbKI n = 6) on days 1, 14 and 21. On the 28th the following analyzes were performed: (i) assessment of pulmonary mechanics (II) measurement of exhaled nitric oxide (ENO), (III) determining the number of cells in bronchoalveolar lavage fluid (BALF), and (IV) immunohistochemical staining of lung fluid, (V) mean linear intercept (Lm) Results: In addition to reducing mechanical changes and Lm, BbKI reduced the number of cells in BALF fluid and decreased cellular expression of TNF-alfa, MMP-9, MMP-12, TIMP-1, eNOS and iNOS in the airway and alveolar walls compared with ELA group (p < 0.05). BbKI decreased volume proportion of 8-iso-PGF2, collagen fibers and elastic airway and alveolar walls compared with ELA group (p < 0.05). There was a reduction from MUC-5 positive cells in the airway walls (p < 0.05). There was a reduction in the number of neutrophils in airway and alveolar walls (p < 0.005) and a reduction in macrophages in alveolar walls (p < 0.005). Conclusion: BbKI was effective in reducing inflammation, pulmonary mechanics and remodeling of the extracellular matrix induced by elastase. BbKI may be a potential pharmacological agent for the treatment of COPD; however, additional tests are required
174

Analýza exprese inhibitorů serinových proteáz v klíštěti \kur{Ixodes ricinus} pomocí kvantitativní real-time PCR

HAUSEROVÁ, Simona January 2019 (has links)
Tick saliva contains a lot of biological active substances helping them to succesfully complete their feeding which is neccesary for their next development. Both proteinaceous and non-proteinaceous molecules including protease inhibitors are present in tick saliva. The biggest family of these proteases are serpins. Serpins are involved in many biological processes as blood coagulation, fibrinolysis, apoptosis or inflammation. The aim of this diploma work was to determine expression profiles of 10 serpins from nymphs of Ixodes ricinus fed for different times using quantitative real time PCR. For chosen genes (IRS 10, IRS 20) dsRNA for silencing of the gene was prepared and using RNA interference the role of these genes during tick (I. ricinus nymphs) feeding and transmission of Borrelia afzelii spirochetes, a vector of Lyme borreliosis, was evaluated.Tick saliva contains a lot of biological active substances helping them to succesfully complete their feeding which is neccesary for their next development. Both proteinaceous and non-proteinaceous molecules including protease inhibitors are present in tick saliva. The biggest family of these proteases are serpins. Serpins are involved in many biological processes as blood coagulation, fibrinolysis, apoptosis or inflammation. The aim of this diploma work was to determine expression profiles of 10 serpins from nymphs of Ixodes ricinus fed for different times using quantitative real time PCR. For chosen genes (IRS 10, IRS 20) dsRNA for silencing of the gene was prepared and using RNA interference the role of these genes during tick (I. ricinus nymphs) feeding and transmission of Borrelia afzelii spirochetes, a vector of Lyme borreliosis, was evaluated.
175

Estudo da atividade e polimorfismos da Paraoxonase-1 em indivíduos infectados pelo vírus da imunodeficiência humana tipo-1 (HIV-1) tratados com inibidores de protease / Study of activity and polymorphisms of Paraoxonase-1 in individuals infected with human immunodeficiency vírus type-1 (HIV-1) treated with protease inhibitors

Cunha, Joel da 31 August 2012 (has links)
A enzima Paraoxonase-1 (PON1) possui atividades paraoxonase, arilestearase e lactonase, entre outras. É a mais estuda da família das PONs que é composta pela PON1, PON2 e PON3. Sugere-se, que todas atuam inibindo o processo de peroxidação lipídica de moléculas como a lipoproteína de baixa densidade (LDL) e alta densidade (HDL), caracterizando assim um possível papel anti-aterogênico. O gene da PON1 apresenta dois sítios polimórficos, com a troca de uma Gln192Arg (Q/R) e Met55Leu, que estão associados com diferenças na atividade e concentrações séricas da enzima. Por sua vez, indivíduos soropositivos para o HIV-1 apresentam alterações do metabolismo lipídico, que poderiam estar associados a alterações na atividade da PON1 e a terapia antirretroviral (TARV) com inibidores de protease (IP). O objetivo do estudo foi determinar as atividades séricas da PON1 e da arilestearase (ARE), e as freqüências alélicas dos polimorfismos genéticos da PON1 192QR e 55LM, e ainda, avaliar a correlação destes parâmetros com as alterações lipídicas em indivíduos soropositivos para o HIV-1 tratados com IP. No período de Setembro de 2009 até Junho de 2012, 174 indivíduos soropositivos e 46 soronegativos para o HIV-1 foram estudados. Foi realizada a genotipagem dos polimorfismos da PON1 192QR e 55LM através de PCR-RFLP. A atividade sérica da PON1/ARE foi avaliada por espectrofotometria empregando-se como substratos o paraoxon e o fenilacetato, respectivamente. O RNA-HIV-1 foi quantificado pelo método NASBA, e os linfócitos T-CD4+ e T-CD8+ por citometria de fluxo. Os níveis séricos de colesterol total, HDL, LDL, triglicérides (TG), ApoA1 e ApoB100 foram determinados e os anticorpos IgG anti-oxLDL por ELISA. A atividade sérica da PON1 foi inferior nos grupos de soropositivos, p<0,05, porém, a atividade ARE não apresentou diferenças entre os grupos estudados, p>0,05. Ambas as atividades não apresentaram relação com os genótipos PON1 192QR e 55LM, e estes genótipos apresentaram uma freqüência alélica semelhante ao grupo de soronegativos. Os níveis séricos de TG foram superiores nos grupos de soropositivos com TARV, p<0,05, enquanto o grupo tratado com IP apresentou níveis séricos de HDL e Apo-A1 inferiores aos demais grupos, p<0,05. Níveis séricos de Apo-B100, IgG anti-oxLDL, e o índice de risco aterogênico foram superiores no grupo tratado com IP, p<0,05. Concluí-se, que indivíduos soropositivos para o HIV-1 apresentaram alterações no metabolismo lipídico, principalmente nos tratados com IP, que adicionalmente apresentaram um maior índice de risco aterogênico e maiores níveis de anticorpos IgG anti-oxLDL. Estas alterações não apresentaram relação com os polimorfismos PON1 192QR e 55LM da PON1, e demonstraram que a atividade da enzima PON-1 esta diminuída em indivíduos soropositivos para o HIV-1 / The enzyme Paraoxonase-1 (PON1) has paraoxonase (PON), arylesterase (ARE) and lactonase activities, among others. It is the most studied member of PON family which is composed of PON1, PON2 and PON3. It is suggested that all members acts by inhibiting the peroxidation of lipid molecules as the low-density lipoprotein (LDL) and high-density lipoprotein (HDL), characterizing a potential anti-atherogenic effect. The PON1 gene has two mainly polymorphic sites, with an exchange of Gln192Arg (Q/R) and Met55Leu (L/M), which are associated with differences in activity and serum concentrations of the enzyme. In turn, seropositive individuals for HIV-1 show changes in lipid metabolism, which could be associated with changes in the activity of PON1 and highly active antiretroviral therapy (HAART) with protease inhibitors (PI). The aim of this study was to determinate the serum PON and ARE activities of PON1, the allele frequencies of PON1 192QR and PON1 55LM genetic polymorphisms and evaluate the correlation between these parameters and lipid abnormalities in seropositive patients for HIV-1 treated with IP. In the period from September 2009 until June 2012, 174 seropositive individuals and 46 soronegative individuals for HIV-1 were studied. We performed PON1 192QR and 55LM genotyping by PCR-RFLP. Serum activities PON and ARE of PON1 were evaluated by spectrophotometry using paraoxon and phenylacetate, respectively, as substrates. The HIV-1-RNA was quantified by the NASBA method, and lymphocytes T-CD4+ and T-CD8+, by flow cytometry. Serum levels of total cholesterol, HDL, LDL, triglycerides (TG), apoA1 and ApoB100 were determined. IgG anti-oxLDL antibodies were quantified by ELISA. The serum PON1 activity was lower in the seropositive group, p<0.05, however, ARE activity did not differ between groups, p>0.05. Both activities had no relation with the PON1 192QR and PON1 55LM genotype, and these individuals showed an allele frequency similar to the seronegative group. Serum levels of TG were higher in groups of HIV-positive with HAART, p<0.05, while the IP-treated group showed serum levels of HDL and ApoA1 lower than other groups, p <0.05. Serum levels of ApoB100, IgG anti-oxLDL antibodies, and atherogenic risk indices were higher in the group treated with PI, p<0.05. It was concluded that individuals HIV-1-infected showed changes in lipid metabolism, especially in those treated with IP, which additionally showed a higher rate of atherogenic risk and higher levels of IgG anti-oxLDL antibodies. These changes did not correlated with PON1 192QR and 55LM polymorphisms and demonstrated that the activity of PON1enzyme is decreased in individuals seropositive for HIV-1
176

Characterization of inhibitory activities from Chinese medicinal herbs and in vitro-selected synthetic RNA ligands against HIV-1 protease.

January 2000 (has links)
by Lam Tin Lun. / Thesis (M.Phil.)--Chinese University of Hong Kong, 2000. / Includes bibliographical references (leaves 131-151). / Abstracts in English and Chinese. / Acknowledgment --- p.I / Table of content --- p.II / List of Tables --- p.IX / List of Figures --- p.XI / Abbreviation --- p.XIII / Abstract --- p.XIV / 論文摘要 --- p.XVI / Chapter CHAPTER 1 --- INTRODUCTION --- p.1 / Chapter 1.1 --- Acquired immunodeficiency syndrome (AIDS) --- p.1 / Chapter 1.1.1 --- History of AIDS --- p.1 / Chapter 1.1.2 --- Definition of AIDS --- p.2 / Chapter 1.1.3 --- HIV/AIDS Around the World --- p.4 / Chapter 1.1.4 --- HIV/AIDS in Hong Kong --- p.4 / Chapter 1.1.4.1 --- Hong Kong AIDS Update --- p.4 / Chapter 1.1.4.2 --- AIDS Transmission --- p.6 / Chapter 1.1.4.3 --- Main AIDS Complications Occur in Hong Kong --- p.6 / Chapter 1.2 --- Human Immunodeficiency Virus (HIV) --- p.7 / Chapter 1.2.1 --- Classification of HIV --- p.7 / Chapter 1.2.2 --- The Structure of HIV Virion --- p.9 / Chapter 1.2.3 --- The HIV Genome --- p.11 / Chapter 1.2.4 --- The Life Cycle of HIV --- p.12 / Chapter 1.2.4.1 --- Invasion of the Cells --- p.12 / Chapter 1.2.4.2 --- Integration into cell genome --- p.13 / Chapter 1.2.4.3 --- Protease and assembly to the virus --- p.13 / Chapter 1.2.5 --- Three Essential Enzymes for HTV-1 Replication --- p.16 / Chapter 1.2.5.1 --- HIV-1 Reverse Transcriptase (HIV-1 RT) --- p.16 / Chapter 1.2.5.2 --- HIV-1 Integrase (HIV-1 IN) --- p.17 / Chapter 1.2.5.3 --- HIV-1 Protease (HIV-1 PR) --- p.18 / Chapter 1.2.6 --- The Different Stages of HIV Infection --- p.19 / Chapter 1.3 --- AIDS therapy --- p.23 / Chapter 1.3.1 --- Drugs Approved by US Food and Drug Administration (FDA) --- p.23 / Chapter 1.3.2 --- Vaccine --- p.26 / Chapter 1.3.3 --- Chemokine Receptor Inhibitor --- p.27 / Chapter 1.3.4 --- Antisense Oligonucleotides Therpay --- p.28 / Chapter 1.3.5 --- Traditional Chinese Medicine (TCM) --- p.29 / Chapter 1.4 --- Objective of My Project --- p.32 / Chapter CHAPTER 2 --- SCREENING OF TRADITIONAL CHINESE MEDICINAL PLANTS FOR HIV-1 PROTEASE INHIBITION --- p.33 / Chapter 2.1 --- Introduction --- p.33 / Chapter 2.2 --- Materials and Methods --- p.35 / Chapter 2.2.1 --- Materials --- p.35 / Chapter 2.2.2 --- Extraction Methods --- p.36 / Chapter 2.2.2.1 --- Aqueous Extraction --- p.36 / Chapter 2.2.2.2 --- Methanol Extraction --- p.37 / Chapter 2.2.3 --- Preparation of Recombinant HIV-1 Protease --- p.37 / Chapter 2.2.3.1 --- Selection of Appropriate Clone --- p.37 / Chapter 2.2.3.2 --- Large-scale Expression of Recombinant HIV-1 Protease --- p.38 / Chapter 2.2.2.3 --- Purification of Recombinant HIV-1 Protease by DEAE Sepharose CL-6B Chromatography --- p.38 / Chapter 2.2.3.4 --- Purification of Recombinant HIV-1 Protease by Mono-S Cation Chromatography --- p.39 / Chapter 2.2.3.5 --- Refolding of Purified Recombinant HIV-1 Protease --- p.40 / Chapter 2.2.3.6 --- Protein Concentration Determination --- p.41 / Chapter 2.2.3.7 --- Sodium Dodecyl Sulfate Polyacrylamide Gel Electrophoresis (SDS-PAGE) --- p.41 / Chapter 2.2.4 --- Characterization of HTV-1 Protease --- p.42 / Chapter 2.2.4.1 --- HIV-1 PR Fluorogenic Assays --- p.42 / Chapter 2.2.4.2 --- HIV-1 PR Assay by Reverse Phase HPLC Separation of Cleavage Products of the Synthetic Peptide Substrate --- p.43 / Chapter 2.3 --- Results --- p.44 / Chapter 2.3.1 --- Functional Analysis of Recombinant HIV-1 PR Activity --- p.44 / Chapter 2.3.2 --- Screening of Crude Extracts for Inhibition of HIV-1 PR Activity --- p.48 / Chapter 2.4 --- Discussion --- p.53 / Chapter CHAPTER 3 --- ISOLATION AND CHARACTERIZATION OF ACTIVE CONSTITUENTS FROM METHANOL EXTRACTS OF WOODWARDIA UNIGEMMATA AGAINST HIV-1 PROTEASE --- p.56 / Chapter 3.1 --- Introduction --- p.56 / Chapter 3.2 --- Materials and Methods --- p.57 / Chapter 3.2.1 --- Materials --- p.57 / Chapter 3.2.2 --- Methods --- p.58 / Chapter 3.2.2.1 --- Methanol Extraction --- p.58 / Chapter 3.2.2.2 --- Removal of Tannins --- p.60 / Chapter 3.2.2.3 --- Glucosidase Digestion --- p.60 / Chapter 3.2.2.4 --- Analytical Thin Layer Chromatographic (TLC) --- p.61 / Chapter 3.2.2.5 --- A cid Hydrolysis --- p.62 / Chapter 3.2.2.6 --- Electrospray Mass Spectrometry --- p.62 / Chapter 3.2.2.7 --- Dose-response Curve --- p.63 / Chapter 3.2.2.8 --- Kinetic Studies --- p.63 / Chapter 3.2.2.9 --- Activity of the HPLC-purified principle (s) on Other Aspartyl Proteases --- p.63 / Chapter 3.3 --- Results --- p.66 / Chapter 3.3.1 --- Purification of Methanol Extracts of Woocdwardia unigemmata --- p.66 / Chapter 3.2.2 --- Removal of Tannins --- p.70 / Chapter 3.2.3 --- Glucosidase Digestion --- p.73 / Chapter 3.2.4 --- Acid Hydrolysis --- p.73 / Chapter 3.2.5 --- Analytical Thin Layer Chromatography --- p.74 / Chapter 3.2.6 --- Electrospray Mass Spectrometry --- p.80 / Chapter 3.2.7 --- Dose-response Inhibition of HIV-1 Protease --- p.80 / Chapter 3.2.8 --- Kinetic Studies --- p.85 / Chapter 3.2.9 --- Effects of HPLC-purified Active Principle on Other Aspartyl Proteases --- p.87 / Chapter 3.3 --- Discussion --- p.89 / Chapter CHATPER 4 --- IDENTIFICATION OF SELECTIVE RNA APTAMERS AGAINST HIV-1 PROTEASE BY SYSTEMATIC EVOLUTION OF LIGANDS BY EXPONENTIAL ENRICHMENT (SELEX) --- p.95 / Chapter 4.1 --- Introduction --- p.95 / Chapter 4.2 --- Materials and Methods --- p.101 / Chapter 4.2.1 --- Materials --- p.101 / Chapter 4.2.2 --- Methods --- p.102 / Chapter 4.2.2.1 --- PCR Amplification for the Generation of a Double-Stranded DNA Library --- p.103 / Chapter 4.2.2.2 --- Preparation of RNA Pools --- p.104 / Chapter 4.2.2.3 --- In vitro Selection of RNA Ligands --- p.104 / Chapter 4.2.2.4 --- Reverse Transcription Reaction of Selected RNA --- p.108 / Chapter 4.2.2.5 --- Cloning of the Amplified cDNA pools --- p.108 / Chapter 4.2.2.6 --- Subcloning of the digested DNA product into pBluescript® IIKS (-) --- p.108 / Chapter 4.2.2.8 --- RNA Labeling with Digoxigenin (DIG) --- p.109 / Chapter 4.2.2.9 --- Binding Affinity of RNA Ligands for HIV-1 PR --- p.109 / Chapter 4.2.2.10 --- Competition Binding Reactions --- p.111 / Chapter 4.2.2.11 --- HIV-1 PR Inhibitory Activities of the Selected RNA Ligands --- p.112 / Chapter 4.3 --- Results --- p.113 / Chapter 4.3.1 --- In Vitro Selection of RNA Ligands --- p.113 / Chapter 4.3.2 --- Sequences of RNA Ligands --- p.114 / Chapter 4.3.3 --- Binding Affinity of RNA Ligands --- p.114 / Chapter 4.3.4 --- Inhibitory Activity of RNA Ligands --- p.119 / Chapter 4.4 --- Discussion --- p.122 / Chapter CHAPTER 5 --- GENERAL DISCUSSION --- p.128 / REFERENCES --- p.132
177

Isolation and characterization of inhibitory activities from Chinese medicinal herbs on HIV reverse transcriptase and protease.

January 1998 (has links)
by Lam Mei Ling. / Thesis (M.Phil.)--Chinese University of Hong Kong, 1998. / Includes bibliographical references (leaves 127-137). / Abstract also in Chinese. / Acknowledgment --- p.I / Table of content --- p.II / List of figures --- p.VII / List of tables --- p.IX / Abbreviation --- p.X / Abstract --- p.XII / 論文摘要 --- p.XIII / Chapter Chapter 1 --- Introduction --- p.1 / Chapter 1.1 --- Acquired immunodeficiency syndrome --- p.1 / Chapter 1.1.1 --- Discovery of AIDS --- p.1 / Chapter 1.1.2 --- Definition and symptoms of AIDS --- p.1 / Chapter 1.1.3 --- AIDS transmission --- p.2 / Chapter 1.1.4 --- AIDS epidemic --- p.3 / Chapter 1.2 --- Human immunodeficiency virus --- p.3 / Chapter 1.2.1 --- Discovery of HIV --- p.3 / Chapter 1.2.2 --- The structure of HIV --- p.4 / Chapter 1.2.3 --- Genomic structure of HIV --- p.5 / Chapter 1.2.4 --- Life cycle of HIV --- p.5 / Chapter 1.2.5 --- How HIV is involved in different stages of AIDS --- p.7 / Chapter 1.3 --- Therapeutic targets for treatment of AIDS --- p.8 / Chapter 1.3.1 --- HIV reverse transcriptase (HIV RT) --- p.8 / Chapter 1.3.2 --- HIV integrase (HIV IN) --- p.11 / Chapter 1.3.3 --- HIV protease (HIV PR) --- p.12 / Chapter 1.3.4 --- Chemokine receptors --- p.14 / Chapter 1.3.5 --- Vaccine development --- p.16 / Chapter 1.4 --- AIDS therapy --- p.17 / Chapter 1.4.1 --- Current status of AIDS therapy --- p.17 / Chapter 1.4.1.1 --- Drugs approved by US Food & Drug Administration (FDA) --- p.17 / Chapter 1.4.1.2 --- Combination therapy --- p.19 / Chapter 1.4.1.3 --- Vaccine development --- p.19 / Chapter 1.4.2 --- Alternative treatment --- p.20 / Chapter 1.5 --- Objective of my project --- p.21 / Chapter Chapter 2 --- Screening of traditional Chinese medicinal (TCM) plants for HIV reverse transcriptase inhibition --- p.22 / Chapter 2.1 --- Introduction --- p.22 / Chapter 2.1.1 --- HIV RT structure and function --- p.22 / Chapter 2.1.2 --- Natural product against HIV RT --- p.25 / Chapter 2.1.3 --- Inhibitory activities from plant extracts --- p.27 / Chapter 2.2 --- Materials and Methods --- p.28 / Chapter 2.2.1 --- Materials --- p.28 / Chapter 2.2.2 --- Extraction methods --- p.30 / Chapter 2.2.2.1 --- Methanol extraction --- p.30 / Chapter 2.2.2.2 --- Hot water extraction --- p.30 / Chapter 2.2.2.3 --- Preparation of Prunella vulgaris extract --- p.30 / Chapter 2.2.3 --- Reverse transcriptase assay --- p.31 / Chapter 2.2.4 --- Characterization of active component in extract of Prunella vulgaris --- p.32 / Chapter 2.2.4.1 --- Protease digestion --- p.32 / Chapter 2.2.4.2 --- Glucosidase digestion --- p.32 / Chapter 2.2.4.3 --- Ethanol precipitation --- p.33 / Chapter 2.2.4.4 --- Sodium periodiate oxidization --- p.33 / Chapter 2.2.4.5 --- Polyvinylpyrrolidone (PVP) Precipitation --- p.34 / Chapter 2.2.4.6 --- Polyamide resin binding --- p.34 / Chapter 2.2.5 --- Purification of Prunella vulgaris extract --- p.34 / Chapter 2.2.5.1 --- Polyamide resin column chromatography --- p.34 / Chapter 2.2.5.2 --- Sephadex LH-20 chromatography --- p.35 / Chapter 2.2.5.3 --- Reverse phase HPLC chromatography --- p.36 / Chapter 2.2.6 --- Characterization of purified Prunella vulgaris extract --- p.37 / Chapter 2.2.6.1 --- Paper chromatography --- p.37 / Chapter 2.2.6.2 --- Acid hydrolysis of extract --- p.37 / Chapter 2.2.6.3 --- Thin layer chromatography --- p.38 / Chapter 2.2.6.4 --- Other assays --- p.39 / Chapter 2.2.7 --- Calculation --- p.40 / Chapter 2.3 --- Results --- p.41 / Chapter 2.3.1 --- Screening of Herbs --- p.41 / Chapter 2.3.1.1 --- Screening of methanol extracts --- p.41 / Chapter 2.3.1.2 --- Screening of hot water extracts --- p.41 / Chapter 2.3.2 --- Characterization of active components in Prunella vulgaris crude extracts --- p.44 / Chapter 2.3.2.1 --- Protease digestion --- p.44 / Chapter 2.3.2.2 --- Glucosidase digestion --- p.44 / Chapter 2.3.2.3 --- Ethanol precipitation --- p.44 / Chapter 2.3.2.4 --- Sodium periodate oxidation --- p.48 / Chapter 2.3.2.5 --- Effect of naturally occurring chemicals on inhibition of HIV RT --- p.48 / Chapter 2.3.2.6 --- Effect of removal of polyphenolic components of aqueous extract on inhibition of HTV RT --- p.51 / Chapter 2.3.3 --- Further purification of active components in aqueous extract of Prunella vulgaris --- p.53 / Chapter 2.3.3.1 --- Absorption chromatography by polyamide resin --- p.53 / Chapter 2.3.3.2 --- The Sephadex LH-20 chromatography --- p.53 / Chapter 2.3.3.3 --- Reverse phase high performance liquid chromatography --- p.56 / Chapter 2.3.3.4 --- Recovery of extract --- p.59 / Chapter 2.3.3.5 --- Inhibition from extract of various steps of purification --- p.59 / Chapter 2.3.4 --- Characterization of purified aqueous extract of Prunella vulgaris --- p.62 / Chapter 2.3.4.1 --- Paper chromatography --- p.62 / Chapter 2.3.4.2 --- Dose response curve --- p.62 / Chapter 2.3.4.3 --- Acid hydrolysis of purified extract --- p.68 / Chapter 2.3.4.4 --- Identification of monosaccharide in purified extract by Thin layer chromatography (TLC) --- p.71 / Chapter 2.3.5 --- Specificity of the purified extract on polymerase inhibition --- p.75 / Chapter 2.3.5.1 --- Inhibition of purified Prunella vulgaris extract on Taq polymerase --- p.75 / Chapter 2.3.5.2 --- Inhibition of purified Prunella vulgaris extract on Superscript II --- p.75 / Chapter 2.4 --- Discussion --- p.79 / Chapter Chapter 3 --- Screening of inhibitory activities from traditional Chinese medicinal (TCM) plants extracts to HIV protease --- p.86 / Chapter 3.1 --- Introduction --- p.86 / Chapter 3.1.1 --- HIV Protease structure and function --- p.86 / Chapter 3.1.2 --- Natural products against HIV Protease --- p.87 / Chapter 3.1.3 --- Plant extracts against HIV Protease --- p.89 / Chapter 3.2 --- Materials and Methods --- p.91 / Chapter 3.2.1 --- Materials --- p.91 / Chapter 3.2.2 --- Expression of HIV protease --- p.92 / Chapter 3.2.2.1 --- Expression and purification of HIV protease --- p.92 / Chapter 3.2.2.2. --- Sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) --- p.94 / Chapter 3.2.3 --- Characterization of HIV protease --- p.95 / Chapter 3.2.3.1 --- HIV protease assay by fluorometric measurement --- p.95 / Chapter 3.2.3.2 --- HIV protease assay by using reverse phase high performance liquid chromatography --- p.96 / Chapter 3.3 --- Results --- p.98 / Chapter 3.3.1 --- Expression of HIV protease --- p.98 / Chapter 3.3.2 --- HIV protease assay --- p.98 / Chapter 3.3.2.1 --- Protease assay by using reverse phase HPLC --- p.98 / Chapter 3.3.2.2 --- Protease assay by fluorometric measurement --- p.98 / Chapter 3.3.3 --- Screening of crude Chinese medicinal extracts on inhibition of HIV protease --- p.104 / Chapter 3.3.3.1 --- Methanol extracts --- p.104 / Chapter 3.3.3.2 --- Water extracts --- p.105 / Chapter 3.3.4 --- Characterization of herbal extracts on inhibition of HIV protease --- p.110 / Chapter 3.3.4.1 --- Dose response curve of methanol extract of Woodwardia unigemmata --- p.110 / Chapter 3.3.4.2 --- Dose response curve of hot water extract of Prunella vulgaris --- p.110 / Chapter 3.3.4.3 --- Inhibition mode of methanol extract of Woodwardia unigemmata --- p.113 / Chapter 3.3.4.4 --- Inhibition mode of hot water extract of Prunella vulgaris --- p.113 / Chapter 3.3.4.5 --- Effect of partially purified extracts on HIV protease inhibition --- p.116 / Chapter 3.4 --- Discussion --- p.119 / Chapter Chapter 4 --- General discussion --- p.124 / References --- p.127 / Appendix / Appendix 1 Pictures of herbs used in this study --- p.i / Appendix 2 Mass spectrometry of purified Prunella vulgaris extract --- p.vi / Appendix 3 Calibration curve for determination of HIV PR concentration --- p.viii
178

Efeito do inibidor de proteinase de origem vegetal BbKl, sobre a lesão pulmonar induzida pela elastase em camundongos C57/Bl6 / Plant-derived proteinase inhibitor Bauhinia Bauhinioides Kallikrein Inhibitor (BbKI) attenuates elastase-induced emphysema in mice

Bruno Tadeu Martins de Oliveira 07 December 2015 (has links)
Introdução: O desequilibrio protease-antiprotease é fundamental para a fisiopatologia da doença pulmonar obstrutiva crónica (DPOC). No entanto, poucos estudos para a inibição da elastase têm sido investigados. Objetivo: O nosso estudo avaliou a capacidade do inibidor proteinase derivada da planta Bauhinia bauhinioides (BbKI) na modulação da inflamação pulmonar induzida pela elastase. Métodos: Camundongos C57BL receberam instilação intratraqueal de elastase (0,025 mg, ELA n=6) ou solução salina (SAL n=6) e foram tratados por via intraperitoneal com BbKI (2 mg/kg, de ELA-BbKI n=6, SAL-BbKI n=6) nos dias 1, 14 e 21. No dia 28 foram realizadas as seguintes análises: (I) avaliação da mecânica pulmonar (II) medida do óxido nítrico exalado (ENO), (III) a determinação do número de céluas no lavado broncoalveolar (FLBA), e ( IV) coloração imunohistoquímica do fluído pulmonar, (V) intercepto linear médio (Lm), Resultados: Além de diminuir alterações mecânicas e a lesão do septo alveolar (Lm), BbKI reduziu o número de células no fluido de FLBA e diminuiu a expressão celular de TNF-alfa, MMP-9, MMP-12, TIMP-1, eNOS e iNOS em vias aéreas e nas paredes alveolares em comparação com o grupo de ELA (p < 0,05). BbKI diminuiu a proporção de volume de 8-iso-PGF2, as fibras colagenas e as elásticas nas vias aéreas e paredes alveolares em comparação com o grupo de ELA (p < 0,05). Houve redução do número de células para positivas MUC-5 nas paredes das vias aéreas (p < 0,05). Houve redução do número de neutrófilos em vias aereas e parenquima e de macrófagosnas paredes alveolares. Conclusão: BbKI foi eficaz na redução da inflamação pulmonar, mecânica pulmonar e do remodelamento da matriz extracelular induzida por elastase. BbKI pode ser uma ferramenta farmacológica potencial para o tratamento da DPOC; no entanto, são necessárias análises adicionais / Introduction: The protease-antiprotease imbalance is essential to the pathophysiology of chronic obstructive pulmonary disease (COPD). However, few studies for inhibition of elastase have been investigated. Objective: Our study evaluated the ability of proteinase inhibitor derived Bauhinia bauhinioides plant (BbKI) in modulating lung inflammation induced by elastase. Methods: Mice C57BL received intratracheal elastase instillation (0.025 mg, ELA n = 6) or saline (SAL n = 6) and were treated intraperitoneally with BbKI (2 mg/kg of ELA-BbKI n = 6, SAL-BbKI n = 6) on days 1, 14 and 21. On the 28th the following analyzes were performed: (i) assessment of pulmonary mechanics (II) measurement of exhaled nitric oxide (ENO), (III) determining the number of cells in bronchoalveolar lavage fluid (BALF), and (IV) immunohistochemical staining of lung fluid, (V) mean linear intercept (Lm) Results: In addition to reducing mechanical changes and Lm, BbKI reduced the number of cells in BALF fluid and decreased cellular expression of TNF-alfa, MMP-9, MMP-12, TIMP-1, eNOS and iNOS in the airway and alveolar walls compared with ELA group (p < 0.05). BbKI decreased volume proportion of 8-iso-PGF2, collagen fibers and elastic airway and alveolar walls compared with ELA group (p < 0.05). There was a reduction from MUC-5 positive cells in the airway walls (p < 0.05). There was a reduction in the number of neutrophils in airway and alveolar walls (p < 0.005) and a reduction in macrophages in alveolar walls (p < 0.005). Conclusion: BbKI was effective in reducing inflammation, pulmonary mechanics and remodeling of the extracellular matrix induced by elastase. BbKI may be a potential pharmacological agent for the treatment of COPD; however, additional tests are required
179

Efeito do inibidor de proteinase de origem vegetal CrataBL, sobre a lesão pulmonar induzida pela elastase em camundongos C57/BI6 / Effect of vegetable proteinase inhibitor, CrataBL, on lung injury induced by elastase in mice C57/Bl6

Leandro Vilela Oliva 28 April 2014 (has links)
O objetivo deste trabalho foi avaliar se a proteína bifuncional de planta, CrataBL, que tem lectina e as propriedades inibidoras de enzima, modula alterações de mecânica pulmonar, inflamatórias e remodelamento induzidas por elastase intratraqueal em camundongos. Métodos: 36 camundongos C57BL6 receberam elastase (0,025 mg) por instilação intratraqueal (grupo ELA e ELA-CrataBL). Os grupos controles receberam salina (grupo SAL e SAL-CrataBL). Os camundongos foram tratados com instilação intraperitoneal de CrataBL (2mg/kg) nos dias 1, 14 e 21 após a instilação intratraqueal de elastase (grupo SAL-CrataBL e ELA-CrataBL) os animais controle receberam salina no mesmo volume. No dia 28, os camundongos foram anestesiados, ventilados mecanicamente e foram analisados a resistência e elastância do sistema respiratório (Ers e Rrs), elastância e resistência tecidual (Htis e Gtis), resistência das vias aéreas (Raw) e óxido nítrico exalado (NOex). Após, o lavado broncoalveolar (LBA) foi realizado, os pulmões foram retirados e por morfometria, e foram quantificados o intercepto linear médio (Lm), a quantidade de neutrófilos, células positivas para TNF-alfa, fibras colágenas, elásticas, células positivas para MMP-9, MMP-12, TIMP-1, eNOS e iNOS e isoprostano no parênquima pulmonar e vias aéreas. No parênquima foram avaliados os macrófagos nos septos alveolares e nas vias aéreas, foram também avaliadas as células para MUC-5. Resultados: No grupo ELA houve um aumento na Ers, Raw, Gtis, Htis, Lm, NOex, nas células totais, macrófagos, neutrófilos, eosinófilos e linfócitos no LBA em relação aos controles (p < 0,05), sendo que Raw, diminuiu também nos grupos SAL-CrataBL e ELA-CrataBL. Nos grupos tratados com CrataBL houve uma diminuição de Ers (37,0±2,2 cmH2O/L), Htis (37,9±3,5 cmH2O/ml/s), ENO (14,7±0,7 ppb), comparativamente ao grupo ELA (p < 0,05). No LBA houve atenuação de neutrófilos (0,003±0,001 104células/ml), linfócitos (0,003±0,001 104células/ml) e de Lm (54,6±6,0 mm). Complementando a avaliação, no grupo que recebeu elastase houve um aumento no número de macrófagos (22,88 +- 2,24 células/104um2), neutrófilos (1,18 +- 0,15 células/10 4um2), células positivas para TNF-ala (12,52 +- 0,42 células/104um2) no parênquima pulmonar. Nas alterações de remodelamento no parênquima pulmonar, houve um aumento da proporção de volume de fibras colágenas (11,5 +- 0,11%), elásticas (0,5 +- 0,03%), na quantidade de células positivas para MMP-9 (18,59 +- 1,87 células/104?m2), MMP-12 (20,17 +- 1,92 células/104?m2), TIMP-1 (14,42 +- 2,05 células/104um2) em comparação com os controlos (p < 0,001). No estresse oxidativo, houve um aumento de eNOS (13,15 +- 0,40 células/104um2), iNOS (10,49 +- 0,65 células/104um2) e isoprostano (18,11 =- 5,38%). O tratamento CrataBL (grupo ELA-CrataBL) reduziu no parênquima pulmonar a quantidade de macrófagos (9,58 +- 1,36 células/104um2), neutrófilos (0,75 +- 0,1 células/104um2), células positivas para TNF-alfa (10.4±0,49 células/104?m2), fibras colágenas (10,8 +- 0,13%), elásticas (0,3 +- 0,02%), a quantidade de células positivas para a MMP-9 (10,35±0,65 células/104um2), MMP-12 (14,15±0,59 células/104um2), TIMP-1 (9,89 +- 2,79 células/104um2), MUC-5 (3,56 +- 0,54 células/104um2), eNOS (6.98 +- 0.32 células/104um2) e iNOS (6,21 +- 0,42 células/104um2) e isoprostano (8,96 +- 3,08 %) em relação ao grupo ELA (p < 0,001). Nas vias aéreas também ocorreu um aumento significativo de neutrófilos (5,97 +- 1,03 células/104um2), células positivas para TNF-alfa (15,82 +- 1,03 células/104um2). Nas alterações de remodelamento pulmonar nas vias aéreas também ocorreu um aumento da proporção de volume de fibras colágenas (8,73 +- 2,59%), elásticas (2,56 +- 0,18%), na quantidade de células positivas para MMP-9 (14,86 +- 1,77 células/104um2), MMP-12 (18,56 +- 1,79 células/104um2), TIMP-1 (1,31 +- 0,12 células/104um2) e MUC-5 (7,09 +- 1,71 células/104um2) em comparação com os controlos (p < 0,001). No estresse oxidativo, houve um aumento de células positivas para eNOS (3,09 +- 0,08 células/104um2), iNOS (5,4 +- 0,3 células/104um2) e isoprostano (18,11 +- 5,38%) em comparação com os controlos (p < 0,001). O tratamento CrataBL (grupo ELA-CrataBL) reduziu nas vias aéreas a quantidade de neutrófilos (4,62 +- 0,61 células/104um2), TNF- alfa (14,30 +- 1,28 células/104um2), fibras colágenas (7,80 +- 1,37%), elásticas (1,4 +- 0,13%), a quantidade de células positivas para a MMP-9 (9,93 +- 1,39 células/104um2), MMP-12 (12,06 +- 1,15 células/104um2), TIMP-1 (0,73 +- 0,05 células/104?m2), MUC-5 (3,56 +- 0,54 células/104um2), eNOS (1,89 +- 0,16 células/104um2) e iNOS (4,3 +- 0,31 células/104um2), isoprostano (7,34 +- 2,31%) em relação ao grupo ELA (p < 0,001). Conclusão: CrataBL atenua as alterações de mecânica pulmonar, lavado bronco alveolar, responsividade inflamatória, controle do remodelamento e estresse oxidativo induzidas pela elastase. Embora mais estudos devam ser realizados, esta proteína bifuncional pode contribuir como potencial ferramenta terapêutica para o tratamento da DPOC / The aim of this study was to evaluate whether the bifunctional protein plant, CrataBL, which has lectin and enzyme inhibitory properties, modulates changes in lung mechanics, inflammatory and remodeling induced by intratracheal elastase in mice.Methods : 36 C57/Bl6 mice received elastase (0.025 mg) by intratracheal (group ELA and ELA-CrataBL). Control groups received saline (group SAL and SAL-CrataBL).The mice were treated with intraperitoneal instillation of CrataBL (2mg/kg) on days 1, 14 and 21 after intratracheal instillation of elastase (group SAL-CrataBL and ELA-CrataBL), control animals received saline in the same volume. On day 28, the mice were anesthetized and mechanically ventilated were analyzed resistance and respiratory system elastance (Ers and Rrs), elastance and tissue resistance (Htis and Gtis), airway resistance (Raw) and exhaled nitric oxide (ENO). After the bronchoalveolar lavage (BAL) was performed, the lungs were removed and morphometry were quantified and the linear intercept mean (Lm), the number of neutrophils, positive cells for TNF-alfa, collagen fibers, positive cells for MMP-9, MMP-12, TIMP-1, eNOS, iNOS and isoprostane in lung parenchyma and airways. Parenchyma was also evaluated macrophages in the alveolar septa. Airway was also evaluated MUC-5 cells. Results: In group ELA was an increase in Ers, Raw, Gtis, Htis, Lm, ENO, in total cells, macrophages, neutrophils, eosinophils and lymphocytes in BAL compared to controls (p < 0.05), and Raw, decreased in both groups SAL-CrataBL and ELA-CrataBL. In the groups treated with CrataBL there was a decrease in Ers (37.0±2.2 cmH2O/L) Htis (37 9±3.5 cmH2O/ml/s) and ENO (14.7±0.7 ppb) compared to the ELA group (p < 0.05). In BAL there was attenuation of neutrophils (0.003±0.001 104cells/ml), lymphocytes (0.003±0.001 104cells/ml) and Lm (54.6±6.0 mm). Complementing the assessment, the group that received elastase was an increase in the number of macrophages (22.88±2.24 cells/104um2), neutrophils (1.18±0.15 cells/104um2), positive TNF-alfa cells (12.52±0.42 cells/104um2) in the lung parenchyma. In remodeling changes in lung parenchyma, there was an increase in the volume ratio of collagen fibers (11.5 ± 0.11%), elastic (0.5±0.03%), the number of positive MMP-9 cells (18.59±1.87 cells/104um2), MMP-12 (20.17 ± 1.92 cells/104um2) TIMP-1 (14.42±2.05 cells/104um2) compared to controls (p < 0.001). Oxidative stress, was an increased of eNOS (13.15±0.40 cells/104um2), iNOS (10.49 ± 0.65 cells/104um2) and isoprostane (18.11±5.38%). Treatment CrataBL (ELA-CrataBL group) reduced the amount of parenchymal lung macrophages (9.58±1.36 cells/104um2), neutrophils (0.75±0.1 cells/104um2), positive TNF-alfa cells (10.4±0.49 cells/104um2), collagen (10.8±0.13%), elastic (0.3±0.02%), the number of positive MMP-9 cells (10.35±0.65 cells/104?m2), MMP-12 (14.15±0.59 cells/104um2), TIMP-1 (9.89±2.79 cells/104um2) MUC-5 (3.56±0.54 cells/104um2), eNOS (6.98±0:32 cells/104um2) and iNOS (6.21±0.42 cells/104um2) and isoprostane (8.96 ± 3.08%) compared to group ELA (p < 0.001). Airway was also a significant increase in neutrophils (5.97±1.03 cells/104um2), positive TNF-alfa cells (15.82±1.03 cells/104um2). Changes in lung airway remodeling also occurred an increase in the volume ratio of collagen fibers (8.73±2.59%), elastic (2.56±0.18%), the number of positive MMP-9 cells (14.86±1.77 cells/104um2), MMP-12 (18.56±1.79 cells/104um2) TIMP-1 (1.31±0.12 cells/104um2) and MUC-5 (7.09±1.71 cells/104um2) compared to controls (p < 0.001). Oxidative stress, an increase of eNOS (3.09 ± 0.08 cells/104um2), iNOS (5.4±0.3 cells/104um2) and isoprostane (18.11±5.38%) compared to controls (p < 0.001). Treatment CrataBL (ELA-CrataBL group) reduced the amount airway neutrophils (4.62±0.61 cells/104um2), TNF-alfa (14.30 ± 1.28 cells/104um2), collagen fibers (7 80±1.37%), elastic (1.4±0.13%), the number of positive MMP-9 cells (9.93±1.39 cells/104um2), MMP-12 (12.06±1.15), TIMP-1 (0.73±0.05 cells/104um2), MUC-5 (3.56±0.54 cells/104um2), eNOS (1.89±0,16 cells/104um2) and iNOS (4.3±0.31 cells/104um2), isoprostane (7.34±2.31%) compared to group ELA (p < 0.001). Conclusion: CrataBL attenuates changes in lung mechanics, broncho alveolar inflammatory responsiveness, control remodeling and oxidative stress induced by elastase. Although more studies should be conducted, this bifunctional protein may contribute as a potential therapeutic tool for the treatment of COPD
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Identificação de polimorfismos e mutações primárias de resistência aos inibidores de protease (NS3/NS4A) no vírus da hepatite C em pacientes com hepatite C crônica monoinfectados e coinfectados pelo vírus da imunodeficiência humana / Characterization of NS3/NS4A polymorphisms and hepatitis C protease inhibitors resistance-associated mutations in hepatitis C virus monoinfected and human immunodeficiency virus coinfected patients

Lisbôa Neto, Gaspar 12 April 2017 (has links)
INTRODUÇÃO: A hepatite C crônica é uma das principais causas de hepatopatia em todo mundo. A coinfecção pelo vírus C (VHC) e o HIV não é incomum, pois ambos compartilham vias similares de transmissão. Recentemente, a terapêutica da hepatite C crônica foi radicalmente modificada com o advento das drogas antivirais de ação direta (DAAs), elevando as taxas de RVS mesmo na população coinfectada. O VHC é caracterizado pela sua alta taxa replicativa e por grande diversidade populacional. Substituições de ocorrência natural na protease viral associadas a resistência podem comprometer a terapêutica em alguns regimes baseados no uso de inibidores de protease (IPs). OBJETIVOS: Estimar a prevalência de polimorfismos e mutações de ocorrência natural associadas a resistência aos IPs em pacientes monoinfectados e coinfectados pelo VHC e HIV e identificar fatores clínicos e virológicos associados a presença de tais substituições. MATERIAIS E MÉTODOS: Dados epidemiológicos e clínicos foram obtidos de 247 pacientes (135 monoinfectados e 112 coinfectados pelo VHC e HIV). VHC RNA foi extraído do plasma dos indivíduos participantes e um fragmento de 765 pares de base da região NS3 foi amplificado e sequenciado por metodologia populacional (técnica de Sanger). O estadiamento da fibrose hepática foi realizado pelo escore não invasivo FIB- 4. RESULTADOS: 54 indivíduos (21,9%) apresentaram pelo menos uma substituição na região NS3/NS4A do VHC. Somente 14 pacientes (5,7%) apresentaram pelo menos uma mutação de resistência aos IPs (T54S, V55A ou Q80R). A Q80K não foi identificada em nenhuma das amostras. Não houve diferença entre monoinfectados e coinfectados quanto à ocorrência de polimorfismos ou mutações associadas a resistência. As variáveis independentemente associadas com substituições na região da protease foram infecção pelo VHC genótipo 1b, bilirrubinas totais > 1,5 vezes o LSN e níveis de albumina < 3,5 g/dL. Fibrose hepática avançada (FIB-4 > 3.25) não esteve associada a presença de substituições. A análise de diversidade nucleotídica na protease viral revelou maior heterogeneidade do VHC genótipo 1b em relação ao 1a. Contudo, a análise de pressão seletiva não demonstrou maior variabilidade de quasiespécies no grupo de hepatopatia avançada, achado este compatível com uma sequência genômica relativamente conservada. CONCLUSÕES: As substituições na região NS3/NS4 do VHC consistiram majoritariamente por polimorfismos naturais sem impacto clínico num eventual tratamento que envolva o uso de IPs. A prevalência de substituições associadas a resistência foi baixa e compatível com os valores informados pela maioria dos estudos nacionais e internacionais. A coinfecção pelo HIV não parece elevar a frequência de substituições na protease do VHC. A região NS3 do genótipo 1b foi altamente variável em relação ao genótipo 1a, reforçando o conceito de possíveis diferenças geográficas em relação ao perfil genético deste vírus / INTRODUCTION: Chronic hepatitis C is a major cause of liver disease worldwide. Hepatitis C vírus (HCV) and HIV coinfection is not uncommon due to similar transmission routes. Recently developed direct-acting antivirals drugs (DAAs) have increased the rate of SVR even in coinfected patients. HCV has a high replication rate and a lack of proofreading activity, leading to a greatly diverse viral population. Baseline spontaneously occurring resistance substitutions in the protease region may impair the rate of success in some protease inhibitors (PI) based regimens. OBJECTIVE: to determine the prevalence of naturally occurring polymorphisms and resistance associated variants to HCV PIs in mono and coinfected HCV HIV patients and to evaluate potential associations between amino acid substitutions in protease domain and clinical / virological features of those patients. METHODS: Clinical and epidemiological data were retrieved from medical records of 247 subjects in Brazil (135 HCV monoinfected and 112 HIV HCV coinfected patients). HCV-RNA was extracted from plasma and a fragment of 765 base pairs from the NS3 region was amplified and sequenced with Sanger-based technology. Fibrosis staging was assessed by non invasive score (FIB-4). RESULTS: Overall, 54 patients (21.9%) had at least one amino acid substitution in the NS3 region; only 14 patients (5.7%) harboured at least one resistance mutation (T54S, V55A, Q80R). Q80K mutation was not found in any sample. There was no difference between monoinfected and coinfected patients regarding the frequency of natural polymorphisms and resistance mutations. Variables independently associated with amino acid substitution were HCV subtype 1b, total bilirubin level > 1.5 ULN and albumin level < 3.5 g/dL. Advanced liver fibrosis (FIB-4 > 3.25) was not related to NS3 polymorphisms nor resistance associated variants. Examination of HCV protease nucleotide diversity revealed greater heterogeneity in subtype 1b than subtype 1a. Analysis of selective pressure did not reveal a greater quasispecies variability in advanced liver fibrosis group, being such finding consistent with a relatively conserved gene in this setting. CONCLUSION: Baseline HCV NS3 amino acid substitutions depicted herein were considered mostly natural polymorphisms with no clinical impact in a PI based therapy. The prevalence of resistance-associated substitutions was low and compatible with values reported by most national and international studies. HIV coinfection was not associated with a greater frequency of such substitutions in the studied sample. The NS3 region of genotype 1b was highly variable in relation to genotype 1a, highlighting geographic differences concerning HCV genetic profile

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