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Etude Physico-chimique des puces à ADN: Stabilité du duplex d'ADN, détection des mutations ponctuelles et au-delàFuchs, Julia 05 November 2009 (has links) (PDF)
Le travail de cette thèse est axé autour de l'observation de la stabilité du duplexe de l'ADN. Exploitant un système de détection en temps réel basé sur le principe de l'imagerie par la résonance des plasmons de surface, nous utilisons des rampes de température pour mettre en évidence les interactions d'ADN sur une biopuce fonctionnalisée. Un premier travail porte ainsi sur une comparaison de chimies de greffages et l'influence du tampon sur la stabilité du duplex d'ADN. Notamment, la salinité du milieu et l'influence d'un dénaturant de l'ADN sont étudiés. Dans un deuxième temps, la méthode des rampes de température est appliquée à la détection des mutations ponctuelles sur des cibles d'ADN et ARN longues, issus de la polymerase chain reaction (PCR) ou la nucleic acid sequence based amplification (NASBA), respectivement. L'effet de compétition entre cibles mutées et l'hybridation à la surface est abordé. De plus, les structures secondaires en solutions peuvent changer la capture des cibles sur les sondes. La possibilité d'intégrer l'amplification dans un système de détection sur puce est démontrée pour la NASBA. Enfin, en collaboration avec le laboratoire des lésions d'acides nucléiques (LAN) au CEA Grenoble, une étude des interactions et de l'activité de protéines réparatrices sur l'ADN endommagé est présentée, profitant, de nouveau du choix flexible de la température.
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Neuartige höherkoordinierte Siliciumkomplexe mit Pyrrol-2-carbaldimin-LigandenGerlach, Daniela 01 February 2013 (has links) (PDF)
Im Rahmen dieser Arbeit wurden Siliciumkomplexe mit dianionischen Pyrrol-2-carbaldimin-funktionalisierten N,N,O- und N,N,N,N-Chelatliganden synthetisiert und kristallografisch, NMR- und UV/Vis-spektroskopisch und mittels quantenchemischer Berechnungen charakterisiert. Die pentakoordinierten Si-Komplexe mit N,N,O-Ligandrückgraten wiesen in Abhängigkeit von den weiteren Si-gebundenen Substituenten unterschiedlich konfigurierte verzerrt trigonal-bipyramidale Si-Koordinationssphären auf. Die Ursache der Farbigkeit dieser Verbindungen konnte mittels quantenchemischer Berechnungen detailliert erklärt werden. – Die Si-Komplexe mit N,N,N,N-Ligandrückgraten liegen in Abhängigkeit von den weiteren Si-gebundenen Substituenten als 5-fach koordinierte kationische oder neutrale 6-fach koordinierte Si-Komplexe vor. Deren Farbigkeit wurde mittels UV/VIS-Spektroskopie untersucht. Von ausgewählten Komplexen wurden die Tensoren der 29Si-NMR-Verschiebung rechnerisch und CP/MAS-NMR-spektroskopisch bestimmt.
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Studies of electronic and structural properties of molecular clusters of prebiotic importanceAylward, Nigel Nunn January 2006 (has links)
This thesis applies the ab initio techniques of computational chemistry to studies of molecular clusters containing covalent (strong) or van der Waals (weak) bonds formed in chemistry and biochemistry in the temperature range 10-300 K. Van derWaals complexes with an enthalpy of formation from reactants of less than 25 kJ mol-1 and covalent clusters are described in this thesis. The first group of van der Waals complexes involved the molecule carbon monoxide that possesses a small permanent dipole that could lead to dipole - induced dipole interaction and dipole - dipole interaction with another reactant in addition to dispersion. The substrates investigated were methanimine and cyanogen where endergonic unstable molecules were formed, and the clustering of carbon monoxideon a porphin surface leading to the formation of carbon - carbon fragments. TheFaraday effect was invoked to suggest that this was the original method by which thechirality of the D-sugars was selected. Coordination of imino-compounds on thesame surface involving induction and electrostatic interactions could lead to the preferential formation of L-aziridones, hydrolysable to L-amino-acids.The preferred formation of D-ribose, and the more stable D-2-deoxyribose, andnucleotides polymerisable to deoxyribonucleic acids was described. The second group of van der Waals complexes involved the polymerisation of acetylene molecules, to di- and tri-acetylene complexes where the exchange interaction involved the quadrupole moment of the acetylene radical reacting with acetylene or diacetylene. The reaction of carbon monoxide was extended to include its interaction with diacetylene. The entire potential energy surface for the interaction with diacetylene was investigated. The reaction was shown to be endergonic to produce a reactive species, here postulated to rearrange with a reasonable activation energy toform an aldehyde. The energetics of the formation of diacetylene, triacetylene andhigher polymers was briefly investigated. The reactivity of the acetylene polymeraldehydes with other substrates was briefly investigated. This work has apparently laid a firm basis both, qualitative and quantitative, tounderstand some of the weakest interactions in nature involving the simplest ofreactions that have been important in atmospheric chemistry.
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Desenvolvimento da fase extratora SPME de poli(pirrol) e avaliação das técnicas SPME/LC e SBSE/LC para análises de antidepressivos em amostras de plasma / Developmento of polypyrrole SPME extraction phase and evaluation of the SPME/LC and SBSE/LC techniques to antidepressants plasma samples analysesAndréa Rodrigues Chaves 27 June 2008 (has links)
A depressão em idosos é uma desordem persistente e recorrente, resultado do stress psicossocial ou efeito de doenças fisiológicas, que podem acarretar a desabilidade do indivíduo, aumento dos sintomas das doenças clínicas, na maior utilização dos serviços de saúde e altas taxas de suicídios.A monitorização terapêutica permite a ndividualização do regime de dosagem, assegurando a eficácia clínica e minimizando os efeitos adversos dos fármacos, prescritos na clínica. Os antidepressivos têm sido monitorados, pois, apresentam intervalos terapêuticos bem estabelecidos, ou seja, a maioria dos pacientes, que apresentam concentrações plasmáticas dentro deste intervalo fixo, tem as desordens psiquiátricas mantidas sob controle e efeitos adversos aceitáveis. Os antidepressivos tricíclicos (ADTs): imipramina, amitriptilina, nortriptilina e desipramina, embora eficazes e ainda muito utilizados, apresentam efeitos adversos, não desejáveis. Os antidepressivos, inibidores seletivos da recaptação de serotonina (SSRIs): citalopram, fluoxetina, paroxetina e sertralina, apresentam eficácia clínica comparável aos clássicos ADTs, mas destituídos dos efeitos adversos associados aos mesmos. Os métodos convencionais, empregados no tratamento de amostras biológicas, para análises de antidepressivos por técnicas cromatográficas, têm sido a extração líquido-líquido e extração em fase sólida. A microextração em fase sólida tem sido empregada em diferentes análises em fluidos biológicos, porém essa técnica apresenta certas limitações como, o número limitado de fases extratoras disponíveis no comércio que sejam adequadas para a análise de compostos não iônicos. A avaliação de novas fases extratoras, mais seletivas, estáveis e de baixo custo tem sido requerida para a análise de fármacos. O interesse no uso de poli(pirrol) (PPY), como fase extratora para SPME, está relacionado às diferentes interações dos fármacos (hidrofóbicas, -, com o grupo funcional polar, troca iônica, ácido-base) aos grupos multifuncionais deste polímero. Sua polimerização pode ser alcançada tanto por oxidação química, quanto por eletrodeposição em meio aquoso ou orgânico. O método eletroquímico apresenta algumas vantagens, tais como: o polímero ou mistura de polimeros podem ser revestidos diretamente em um metal, incorporação de diferentes grupos funcionais, entre outras, a polimerização pode ser eletroquimicamente controlada através da voltametria cíclica. Neste trabalho o poli(pirrol) (PPY) foi eletrodepositado em eletrodo de aço inox e empregado para a microextração em fase sólida dos antidepressivos: paroxetina, fluoxetina, mirtazapina, duloxetina, sertralina e citalopram. As variáveis da eletrodeposição, número de ciclos e contra-íon empregado no processo de eletrodeposição foram otimizadas. Assim como as variáveis SPME: tempo, temperatura, pH e volume de amostra, e tempo e solvente de dessorção; almejando maior sensibilidade para o método SPME-PPY/LC UV proposto. A extração sortiva em barra de agitação (SBSE), técnica recente de preparo de amostras, para a pré-concentração de compostos orgânicos presentes em amostras biológicas, baseia-se na extração estática, através do polímero polidimetilsiloxano (PDMS), no qual ocorre a dissolução (sorção) do analito. Neste trabalho, as técnicas SBSE e cromatografia líquida de alta eficiência com detecção UV (SBSE/LC UV) foram avaliadas para a análise simultânea de antidepressivos em amostras de plasma para fins de monitorização terapêutica. As condições cromatográficas de análise, assim como as variáveis SBSE de extração (tempo, temperatura, força iônica, pH da matriz) e tempo de dessorção, foram otimizadas, visando adequada sensibilidade analítica. A validação analítica foi realizada segundo normas da ANVISA, para ambos os métodos propostos, em diferentes concentrações plasmáticas, as quais contemplam o intervalo terapêutico. Segundo os parâmetros de validação avaliados, os métodos SBSE/LCUV e SPMEPPY/LCUV padronizados poderão ser empregados nas análises dos antidepressivos, para fins de monitorização terapêutica. / Depression in the elderly is a persistent and recurrent disorder resulting from psychosocial stress or physiological effect or disease. This condition can lead to disability, cognitive impairment, enhanced symptoms of medical illnesses, increased use of health care services and, increased of suicide rates. Therapeutic monitoring allows individualization of the dose regimen, ensuring clinical effectiveness and minimizing the adverse effects of drugs, prescribed at the clinic. Antidepressants have been monitored because they present well - established therapeutic intervals; in other words, most of the patients present plasmatic concentrations within this fixed range, so that their psychiatric disorders are kept under control and the adverse effects are acceptable. The tricyclic antidepressants (ADTs) imipramine, amitriptyline, nortryptiline, and desipramine, have adverse effects. The selective serotonin reuptake inhibitors (SSRIs) antidepressants citalopram, fluoxetine, paroxetine, and sertraline, are clinically effectiveness as the classic ADTs, but they do not lead to the adverse effects associated to the latter. The conventional methods employed in the treatment of biological samples for analysis of antidepressants by chromatographic techniques have been the liquid-liquid extraction (LLE) and solid phase extraction (SPE) techniques. Solid-phase microextraction (SPME) has been used in various analyses of biological fluids. However, this technique has limitations such as the small number of comemercially available extracting phases that are appropriate for the analysis of non-ionic compounds. Investigation of new extraction phases that are more selective and stable, as well as inexpensive, has been requested for drug analysis. The interest in the use of poly(pirrole) (PPY) as an extraction phase for SPME is related to the different interactions of the drugs (hydrophobic, - , with the polar functional group, ionic exchange and acid-base) with the multifunctional groups on this polymer. The PPY polymerization can be achieved by chemical oxidation or electropolymerization in aqueous solution or organic solvents. The electrochemical method has advantages such as, the polymer or a mixes of polymers can be directly deposited on a metal wire, different functional groups can be incorporated, polymerization can be electrochemically controlled by cyclic voltammetry. In this work poly(pyrrole) was electropolymerized on stainless steel electrodes and employed for the solid phase microextraction of the antidepressants paroxetine, fluoxetine, mirtazapine, duloxetine, sertraline, and citalopram. The electropolymerization variables, the number of cycles and counterion employed in the process were optimized, as well as the SPME variables, time, temperature, pH, sample volume, and desorption solvent; aiming at a better sensibility for the proposed method SPME-PPY/LC-UV. The stir bar sorptive extraction (SBSE), recently established technique for samples preparation, that targets the pre concentration of organic compounds present in biological samples. It is based on static extraction, through the polymeric polydimethylsiloxane (PDMS), where there is analyte dissolution (sorption). In this work, the SBSE technique and liquid chromatography with UV detector (SBSE/LC-UV) were evaluated for the simultaneous determination of antidepressants in plasma samples for therapeutic monitoring purposes. The cromatographic conditions, the SBSE extraction variables (time, temperature, ionic strength and matrix pH), and the dessorption time were optimized for appropriate analytical sensibility. The analytical validation was accomplished according to the norms of ANVISA for both of the proposed methods, in different plasmatic concentrations, which contemplate the therapeutic interval. According to the evaluated validation parameters, the standardized methods SBSE/LC-UV and SPME-PPY/LC-UV can be used in the analyses of antidepressants for therapeutic drug monitoring purposes.
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Synthèse de nouveaux analogues de la phénylalanineDörr, Aurélie January 2007 (has links)
Mémoire numérisé par la Direction des bibliothèques de l'Université de Montréal.
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Neuartige höherkoordinierte Siliciumkomplexe mit Pyrrol-2-carbaldimin-LigandenGerlach, Daniela 18 January 2013 (has links)
Im Rahmen dieser Arbeit wurden Siliciumkomplexe mit dianionischen Pyrrol-2-carbaldimin-funktionalisierten N,N,O- und N,N,N,N-Chelatliganden synthetisiert und kristallografisch, NMR- und UV/Vis-spektroskopisch und mittels quantenchemischer Berechnungen charakterisiert. Die pentakoordinierten Si-Komplexe mit N,N,O-Ligandrückgraten wiesen in Abhängigkeit von den weiteren Si-gebundenen Substituenten unterschiedlich konfigurierte verzerrt trigonal-bipyramidale Si-Koordinationssphären auf. Die Ursache der Farbigkeit dieser Verbindungen konnte mittels quantenchemischer Berechnungen detailliert erklärt werden. – Die Si-Komplexe mit N,N,N,N-Ligandrückgraten liegen in Abhängigkeit von den weiteren Si-gebundenen Substituenten als 5-fach koordinierte kationische oder neutrale 6-fach koordinierte Si-Komplexe vor. Deren Farbigkeit wurde mittels UV/VIS-Spektroskopie untersucht. Von ausgewählten Komplexen wurden die Tensoren der 29Si-NMR-Verschiebung rechnerisch und CP/MAS-NMR-spektroskopisch bestimmt.
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Design, Synthesis and Characterization of Fluorescent Dyes and Liquid Crystal SemiconductorsSemyonov, Alexander N. 24 July 2006 (has links)
No description available.
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Neuartige Pyrrol/Pyrazol-Bausteine für die Synthese von Hybrid-Makrozyklen, azyklischen Ligandsystemen und bimetallischen Komplexen / Novel Pyrrole/Pyrazole-building blocks for the synthesis of Hybrid-Macrocycles, acyclic ligand systems and bimetallic complexesKatsiaouni, Stamatia 01 November 2007 (has links)
No description available.
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