Data query operations inside programming languages presently perform their functions through the use of domain-specific, declarative expressions and by way of course-grain, API library calls. These methods of operation are practiced by relational databases as well as semistructured XML data stores. Layers of translation, which are necessary to transform data and instructions from the domain of programming languages to data query systems, negtatively effect the performance of data query operations. Skuery resolves this impedance by adopting XML as a native data type with a native representation (SXML). Likewise, query operations are defined in a general purpose programming language (Scheme in this case) not in an external data query environment. Skuery increases programmer productivity by abstracting layers of translation and unifying computational and data query operations under the auspices of a general purpose programming language.

Current web search engines, such as Google, Yahoo!, and Bing, rank the set of documents S retrieved in response to a user query Q and display each document with a title and a snippet, which serves as an abstract of the corresponding document in S. Snippets, however, are not as useful as they are designed for, i.e., to assist search engine users to quickly identify results of interest, if they exist, without browsing through the documents in S, since they (i) often include very similar information and (ii) do not capture the main content of the corresponding documents. Moreover, when the intended information need specified in a search query is ambiguous, it is difficult, if not impossible, for a search engine to identify precisely the set of documents that satisfy the user's intended request. Furthermore, a document title retrieved by web search engines is not always a good indicator of the content of the corresponding document, since it is not always informative. All these design problems can be solved by our proposed query-based, web informative summarization engine, denoted Q-WISE. Q-WISE clusters documents in S, which allows users to view segregated document collections created according to the specific topic covered in each collection, and generates a concise/comprehensive summary for each collection/cluster of documents. Q-WISE is also equipped with a query suggestion module that provides a guide to its users in formulating a keyword query, which facilitates the web search and improves the precision and recall of the search results. Experimental results show that Q-WISE is highly effective and efficient in generating a high quality summary for each cluster of documents on a specific topic, retrieved in response to a Q-WISE user's query. The empirical study also shows that Q-WISE's clustering algorithm is highly accurate, labels generated for the clusters are useful and often reflect the topic of the corresponding clustered documents, and the performance of the query suggestion module of Q-WISE is comparable to commercial web search engines.

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As demanded by applications such as GIS, CAD, ecology analysis, and space research, efficient spatial data access methods have attracted much research. Especially, moving object management and continuous spatial queries are becoming highlighted in the spatial database area. However, most of the existing spatial query processing approaches were designed for single-user environments, which may not ensure correctness and data consistency in multiple-user environments. This research focuses on designing efficient concurrent operations on spatial datasets. Current multidimensional data access methods can be categorized into two types: 1) pure multidimensional indexing structures such as the R-tree family and grid file; 2) linear spatial access methods, represented by the Space-Filling Curve (SFC) combined with B-trees. Concurrency control protocols have been designed for some pure multidimensional indexing structures, but none of them is suitable for variants of R-trees with object clipping, which are efficient in searching. On the other hand, there is no concurrency control protocol designed for linear spatial indexing structures, where the one-dimensional concurrency control protocols cannot be directly applied. Furthermore, the recently designed query processing approaches for moving objects have not been protected by any efficient concurrency control protocols. In this research, solutions for efficient concurrent access frameworks on both types of spatial indexing structures are provided, as well as for continuous query processing on moving objects, for multiple-user environments. These concurrent access frameworks can satisfy the concurrency control requirements, while providing outstanding performance for concurrent queries. Major contributions of this research include: (1) a new efficient spatial indexing approach with object clipping technique, ZR+-tree, that outperforms R-tree and R+-tree on searching; (2) a concurrency control protocol, GLIP, to provide high throughput and phantom update protection on spatial indexing with object clipping; (3) efficient concurrent operations for indices based on linear spatial access methods, which form up the CLAM protocol; (4) efficient concurrent continuous query processing on moving objects for both R-tree-based and linear spatial indexing frameworks; (5) a generic access framework, Disposable Index, for optimal location update and parallel search. / Ph. D.

Graphen sind in vielen Bereichen des Lebens zu finden, wobei wir speziell an Graphen in der Biologie interessiert sind. Knoten in solchen Graphen sind chemische Komponenten, Enzyme, Reaktionen oder Interaktionen, die durch Kanten miteinander verbunden sind. Eine effiziente Ausführung von Graphanfragen ist eine Herausforderung. In dieser Arbeit präsentieren wir GRIcano, ein System, das die effiziente Ausführung von Graphanfragen erlaubt. Wir nehmen an, dass Graphen in relationalen Datenbankmanagementsystemen (RDBMS) gespeichert sind. Als Graphanfragesprache schlagen wir eine erweiterte Version der Pathway Query Language (PQL) vor. Der Hauptbestandteil von GRIcano ist ein kostenbasierter Anfrageoptimierer. Diese Arbeit enthält Beiträge zu allen drei benötigten Komponenten des Optimierers, der relationalen Algebra, Implementierungen und Kostenmodellen. Die Operatoren der relationalen Algebra sind nicht ausreichend, um Graphanfragen auszudrücken. Daher stellen wir zuerst neue Operatoren vor. Wir schlagen den Erreichbarkeits-, Distanz-, Pfadlängen- und Pfadoperator vor. Zusätzlich geben wir Regeln für die Umformung von Ausdrücken an. Des Weiteren präsentieren wir Implementierungen für jeden vorgeschlagenen Operator. Der Hauptbeitrag ist GRIPP, eine Indexstruktur, die die effiziente Ausführung von Erreichbarkeitsanfragen auf sehr großen Graphen erlaubt. Wir zeigen, wie GRIPP und die rekursive Anfragestrategie genutzt werden können, um Implementierungen für alle Operatoren bereitzustellen. Die dritte Komponente von GRIcano ist das Kostenmodell, das Kardinalitätsabschätzungen der Operatoren und Kostenfunktionen für die Implementierungen benötigt. Basierend auf umfangreichen Experimenten schlagen wir in dieser Arbeit Funktionen dafür vor. Der neue Ansatz unserer Kostenmodelle ist, dass die Funktionen nur Kennzahlen der Graphen verwenden. Abschließend zeigen wir die Wirkungsweise von GRIcano durch Beispielanfragen auf echten biologischen Graphen. / Graphs occur in many areas of life. We are interested in graphs in biology, where nodes are chemical compounds, enzymes, reactions, or interactions that are connected by edges. Efficiently querying these graphs is a challenging task. In this thesis we present GRIcano, a system that efficiently executes graph queries. For GRIcano we assume that graphs are stored and queried using relational database management systems (RDBMS). We propose an extended version of the Pathway Query Language PQL to express graph queries. The core of GRIcano is a cost-based query optimizer. This thesis makes contributions to all three required components of the optimizer, the relational algebra, implementations, and cost model. Relational algebra operators alone are not sufficient to express graph queries. Thus, we first present new operators to rewrite PQL queries to algebra expressions. We propose the reachability, distance, path length, and path operator. In addition, we provide rewrite rules for the newly proposed operators in combination with standard relational algebra operators. Secondly, we present implementations for each proposed operator. The main contribution is GRIPP, an index structure that allows us to answer reachability queries on very large graphs. GRIPP has advantages over other existing index structures, which we review in this work. In addition, we show how to employ GRIPP and the recursive query strategy as implementation for all four proposed operators. The third component of GRIcano is the cost model, which requires cardinality estimates for operators and cost functions for implementations. Based on extensive experimental evaluation of our proposed algorithms we present functions to estimate the cardinality of operators and the cost of executing a query. The novelty of our approach is that these functions only use key figures of the graph. We finally present the effectiveness of GRIcano using exemplary graph queries on real biological networks.

We consider the problem of answering conjunctive queries over description logic knowledge bases via query rewriting. Given a conjunctive query Q and a TBox T, we compute a new query Q′ that incorporates the semantic consequences of T such that, for any ABox A, evaluating Q over T and A can be done by evaluating the new query Q′ over A alone. We present RQR—a novel resolution-based rewriting algorithm for the description logic ELHIO¬ that generalizes and extends existing approaches. RQR not only handles a spectrum of logics ranging from DL-Lite_core up to ELHIO¬, but it is worst-case optimal with respect to data complexity for all of these logics; moreover, given the form of the rewritten queries, their evaluation can be delegated to off-the-shelf (deductive) database systems. We use RQR to derive the novel complexity results that conjunctive query answering for ELHIO¬ and DL-Lite+ are, respectively, PTime and NLogSpace complete with respect to data complexity. In order to show the practicality of our approach, we present the results of an empirical evaluation. Our evaluation suggests that RQR, enhanced with various straightforward optimizations, can be successfully used in conjunction with a (deductive) database system in order to answer queries over knowledge bases in practice. Moreover, in spite of being a more general procedure, RQR will often produce significantly smaller rewritings than the standard query rewriting algorithm for the DL-Lite family of logics.