A via de sinalização da GTPase RhoA atua em diversos processos celulares. Para avaliar o comportamento de RhoA, após estresse causado por radiação ultravioleta, foram gerados clones mutantes que expressam RhoA em seu estado constitutivamente ativo e dominante negativo. Após exposição das linhagens à radiação ultravioleta, observou-se uma maior sensibilidade e um maior tempo de recuperação das linhagens quando a atividade de RhoA é reduzida. Estes prejuízos no reparo prejudicaram a proliferação e sobrevivência celular quando da deficiência na atividade de RhoA. Em linhagens deficientes na via de NER, percebemos que estas linhagens possuem uma capacidade ainda mais reduzida de reparo quando a atividade de RhoA é inibida. / The RhoA GTPase signaling pathway acts on many cellular processes. To evaluate this possible RhoA function after stress caused by ultraviolet radiation, mutant clones expressing RhoA in its constitutively active or dominant negative forms were generated. After exposure of the cells to ultraviolet radiation, cell lines showed a higher sensitivity and a delayed recovery capacity when the RhoA activity is reduced. The impaired repair reduced the cells proliferation and survival under RhoA deficiency. In cell lines deficient in NER pathway, we notice that these cell lines, have a further reduced ability to repair damaged DNA under RhoA inhibition.

Les phosphoinositides sont des molécules régulatrices présentes à l'interface membrane-cytosol, impliquées dans la transduction du signal, le trafic membranaire ainsi que l'organisation du cytosquelette. Ces lipides recrutent non seulement diverses protéines vers des compartiments spécifiques, mais régulent aussi leur activité enzymatique. Chez la levure Saccharomyces cerevisiae, ils interagissent directement avec le domaine RhoGAP de la protéine Rgd1, identifiée comme un activateur commun aux GTPases Rho3 et Rho4. Ces 2 protéines, respectivement impliquées dans la croissance polarisée et la cytocinèse, voient leur activité GTPasique exacerbée en présence de Rgd1pet des PIPs. L'objectif de cette thèse était comprendre à l'échelle moléculaire le processus unique d'activation de RhoGAP par les PIPs. Pour ce faire, nous avons réalisé l'étude structurale de RhoGAP par cristallographie couplée à la RMN en solution. Nos résultats montrent que le domaine possède les éléments essentiels à l'activation des protéines Rho. L'interaction avec les PIPs a été suivie par RMN en présence de PI(4)P et de PI(4,5)P2, respectivement localisés dans les vésicules de sécrétion et à la membrane plasmique. Nos résultats révèlent un site de liaison commun aux PIPs dans une région non conservée chez les domaines RhoGAP. L'affinité des complexes, de l'ordre de la centaine de micromolaires suggèrent qu'in vivo l'interaction soit transitoire et réversible avec les PIPs. La sélectivité de l'interaction se ferait donc de façon spatio-temporelle, au niveau des vésicules de sécrétion pour la croissance polarisée et de la membrane plasmique pour la cytocinèse. / Phosphoinositides act as regulatory and signalling molecules at the membrane-cytosol interface in signal transduction, membrane traffic and cytoskeleton organization. These lipids recruit several proteins to specific compartments, but also regulate their activity. In the yeast Saccharomycescerevisiae, they directly bind the Rgd1-RhoGAP domain, that stimulates the GTPase activity of bothRho3p and Rho4p. The GTPase activity of these two Rho proteins, respectively involved in the polarized growth and cytokinesis of the yeast, is enhanced with the presence of Rgd1p and PIPs. The main objective of this thesis is to understand the PIP-RhoGAP interaction at the molecular level. In order to do that, we coupled X-ray structure determination to solution NMR spectroscopy on the isolated RhoGAP domain. Our results show that the domain contains the conserved elements that would usually confer the catalytic GTPase activation. We us e liquid-state NMR spectroscopy to follow the interaction with PI(4)P and PI(4,5)P2, respectively found in secretion vesicles and the plasma membrane. Our study reveals a common binding site for both PIPs in a non-conserved region in the RhoGAP domain family. We measured sub-millimolar binding affinity for PIPs. Such moderate binding affinities are consistent with the biological requirement for reversible complex formation. The selectivity of the interaction could be made in a spatio temporal way, on the secretion vesicles during polarized growth and at the plasma membrane during cytokinesis.

Die durch Lipopolysaccharid (LPS) induzierte frühe Immunantwort ist ein wesentlicher Mechanismus der Infektabwehr durch die angeborene Immunität. Bei starker LPS-Exposition kann es andererseits zur Ausbildung eines septischen Syndroms kommen. Der endothelialen Sekretion von Interleukin-8 (IL-8/CXCL8), das als Chemokin die Migration neutrophiler Granulozyten vermittelt, kommt dabei herausragende Bedeutung zu. Zielsetzung dieser Arbeit war es, die Relevanz der Rho-Proteine RhoA, Rac1 und Cdc42 für die LPS-induzierte intrazelluläre Signaltransduktion mittels Überexpression inaktiver Mutanten dieser Proteine zu untersuchen. Diese Untersuchung wurde erschwert durch die schlechte Transfizierbarkeit der Endothelzelllinie HPMEC-ST1.6R, die nahezu alle Charakteristika primärer Endothelzellen aufweist. Deshalb wurde eine Methode etabliert, die durch Kotransfektion des Grünen Fluoreszenzproteins (GFP) die flusszytometrische Selektion der transfizierten Zellen anhand ihrer GFP-bedingten Fluoreszenz und die Messung der Expression von CXCL8 allein in dieser Population ermöglicht. Damit wurde nachgewiesen, dass die inaktiven Mutanten RhoAN19, Rac1N17 und Cdc42N17 jeweils die LPS-induzierte Expression von CXCL8 vermindern. Die größte Reduktion der CXCL8-Expression um 38 % der Positivkontrolle zeigte sich nach Transfektion der Mutante Rac1N17. Die Zelllinie CHO-3E10 exprimiert einen artifiziellen Reporter unter der Kontrolle eines Fragments aus der Verstärkerregion des Gens für das Endotheliale Leukozyten-Adhäsionsmolekül ELAM-1 (CD62E). Die Transfektion jeder einzelnen der inaktiven Varianten der drei GTP-bindenden Proteine in Zellen der Linie CHO-3E10 reduzierte die Expression des Reporterproteins nach Stimulation mit LPS signifikant. Die stärkste Reduktion der Reporterexpression um 51 % der Positivkontrolle ergab sich unter Rac1N17. Zusammengefasst zeigt die Studie, dass die Überexpression der inaktiven Mutanten RhoAN19, Rac1N17 und Cdc42N17 zu einer Abnahme der endothelialen Expression von CXCL8 führt. Darüberhinaus ergab sich im Vergleich zu den Mutanten RhoAN19 und Cdc42N17 die stärkste Reduktion der CXCL8-Expression in Endothelzellen nach Transfektion der Mutante Rac1N17. / The early immune response induced by Lipopolysaccaride (LPS) is a crucial mechanism in fighting off infections by the innate immunity. On the other side high amounts of LPS can lead to the development of a sepsis. In this process the endothelial secretion of interleukin-8 (IL-8/CXCL8), which causes the migration of neutrophilic granulocytes to the site of infection is highly important. The aim of this study was to analyze the relevance of each of the three Rho-proteins RhoA, Rac1 and Cdc42 for the intracellular signal transduction resulting in CXCL8-expression by means of overexpressing inactive mutants of these proteins. Cells of the human microvascular endothelial cell line HPMEC-ST1.6R show most characteristics of primary endothelial cells and are extremely difficult to transfect. Therefore a method was established, which allowed sorting of successfully transfected cells by cotransfecting a gene encoding for green fluorescence protein (GFP). This method permitted measuring intracellular expression of CXCL8 in the population successfully transfected with plasmids encoding for RhoAN19, Rac1N17 or Cdc42N17 mutants. This experiments demonstrated that the inactive mutants RhoAN19 Rac1N17 or Cdc42N17 each decreased the LPS-induced expression of CXCL8. Quantitative comparision showed the greatest reduction of 38 % in CXCL8-expression due to transfection of the Rac1N17 mutant. The LPS-inducible reporter cell line CHO-3E10 used in this study expresses the human CD25-antigene as an artificial reporter protein under the control of a fragment from the enhancer region of the gene for the human endothelial leukocytic adhesionmolecule ELAM-1 (CD62E). Transfecting each of the inactive mutants RhoAN19, Rac1N17 or Cdc42N17 in CHO-3E10 cells significantly reduced the LPS-induced expression of the reporter protein. The greatest reduction in reporter expression of 51 % resulted from transfection with the Rac1N17 mutant. In conclusion, this study demonstrates that overexpression of nonfunctional GTP-binding proteins RhoAN19, Rac1N17 or Cdc42N17 leads to a decrease in endothelial CXCL8-expression. Moreover, CXCL8-expression in endothelial cells transfected with the Rac1N17 mutant was most efficiently reduced when compared to the other mutants.

Spinal muscular atrophy (SMA) is the leading genetic cause of death of young children. It is an autosomal recessive disease caused by the mutation and/or the deletion within the ubiquitously expressed survival motor neuron 1 (SMN1) gene. SMA pathology is characterized by spinal cord motor neuron degeneration, neuromuscular junction (NMJ) defects and muscular atrophy. Upon disease onset, SMA patients progressively become paralyzed and in the most severe cases, they die due to respiratory complications. Over the years, it has become clear that SMN is a multi-functional protein with important roles in small nuclear ribonucleoprotein (snRNP) assembly, RNA metabolism, axonal outgrowth and pathfinding, mRNA transport as well as in the functional development of NMJs, skeletal muscle and cardiac muscle. However, it remains unclear which of these functions, and the respective perturbed molecular pathways, dictate SMA pathogenesis. Here, we have established Smn-depleted PC12 cells and an intermediate SMA mouse model to characterize a role for Smn in the regulation of actin cytoskeleton dynamics. We find that Smn depletion results in the increased expression of profilin IIa and active RhoA (RhoA-GTP) as well as the decreased expression of plastin 3 and Cdc42. Importantly, the inhibition of rho-kinase (ROCK), a direct downstream regulator of RhoA, significantly increased the lifespan of SMA mice and shows beneficial potential as a therapeutic strategy for SMA. In an addition, we have uncovered a muscle- and motor neuron-independent role for SMN in the regulation of pancreatic development and glucose metabolism in SMA mice and type 1 SMA patients. This finding highlights the importance of combining a glucose tolerance assessment of SMA patients with their existing clinical care management. Thus, our work has uncovered two novel and equally important roles for the SMN protein, both of which contribute significantly to SMA pathogenesis.

Lokale Pyramidenzellen sind die Hauptneurone des Hippocampus und können durch ihre Position und die Morphologie ihrer Dendriten als CA1 und CA3 Pyramidenzellen identifiziert werden. Die Dendriten der exzitatorischen Pyramidenzellen sind mit postsynaptischen Vorwölbungen, den so genannten Spines, bedeckt, welche in einem spezifischen Verteilungsmuster angeordnet sind. Neurotoxine wie das C3 Toxin von Clostridium botulinum sind funktionelle Substanzen, die die neuronale Morphologie verändern und die neuronale Funktion beeinflussen können. In dieser Studie wurden die morphologischen Veränderungen von intrazellulär mit Biocytin gefüllten CA1 Pyramidenzellen qualitativ und quantitativ analysiert. Die hippocampalen Schnittkulturen, in denen sich bekanntermaßen Pyramidenzellen ähnlich entwickeln wie in vivo, wurden dazu herangezogen, die Effekte der C3bot Toxin-Applikation auf die Verzweigung der Dendriten sowie Anzahl und Dichte der dendritischen Spines zu untersuchen. Drei Gruppen von Zellen wurden verglichen: Erstens Neurone, die in serumhaltigem Medium inkubiert worden waren, zweitens Nervenzellen, die in einem Medium ohne Serum inkubiert worden waren und drittens Zellen, die unter Serumentzug dem C3bot Toxin ausgesetzt worden waren. Die Inkubation dauerte 14 Tage, während die Dauer der Toxinexposition zwischen vier und sechs Stunden betrug. Mit Hilfe eines Computers wurden zweidimensionale Nachbildungen der biocytin-markierten CA1 Pyramidenzellen erstellt, und die Gesamtlänge der Dendriten, die Anzahl der dendritischen Verzweigungspunkte und die Gesamtzahl und Dichte der dendritischen Spines gemessen und statistisch ausgewertet. Signifikante Unterschiede wurden zwischen der mit C3 Toxin behandelten Gruppe und der serumhaltig inkubierten Kontrollgruppe beobachtet. Diese signifikanten morphologischen Veränderungen traten selektiv an den Apikaldendriten der toxinbehandelten CA1 Pyramidenzellen auf. Aus der Behandlung resultierte eine Reduktion der Anzahl apikaler Verzweigungspunkte, der Anzahl der apikalen Spines, der Gesamtzahl (basal und apikal addiert) der Spines sowie der Gesamtspinedichte. Im Gegensatz dazu ergaben sich keine signifikanten Unterschiede zwischen der toxinbehandelten Gruppe und der ohne Serum inkubierten Kontrollgruppe, obwohl der Serumentzug im Vergleich zur serumhaltig inkubierten Kontrollgruppe die Entwicklung der Zellen beeinflusste. Auf Grundlage der beobachteten Veränderungen können wir schließen, dass die Behandlung mit C3 bot einen starken Einfluss selektiv auf die Morphologie der Apikaldendriten ausübt. Der Mechanismus, der dieser selektiven Empfindlichkeit der Apikaldendriten gegenüber dem C3 bot Toxin zugrunde liegt, wird Gegenstand weiterer Untersuchungen sein.

No description available.

Spinal muscular atrophy (SMA) is the leading genetic cause of death of young children. It is an autosomal recessive disease caused by the mutation and/or the deletion within the ubiquitously expressed survival motor neuron 1 (SMN1) gene. SMA pathology is characterized by spinal cord motor neuron degeneration, neuromuscular junction (NMJ) defects and muscular atrophy. Upon disease onset, SMA patients progressively become paralyzed and in the most severe cases, they die due to respiratory complications. Over the years, it has become clear that SMN is a multi-functional protein with important roles in small nuclear ribonucleoprotein (snRNP) assembly, RNA metabolism, axonal outgrowth and pathfinding, mRNA transport as well as in the functional development of NMJs, skeletal muscle and cardiac muscle. However, it remains unclear which of these functions, and the respective perturbed molecular pathways, dictate SMA pathogenesis. Here, we have established Smn-depleted PC12 cells and an intermediate SMA mouse model to characterize a role for Smn in the regulation of actin cytoskeleton dynamics. We find that Smn depletion results in the increased expression of profilin IIa and active RhoA (RhoA-GTP) as well as the decreased expression of plastin 3 and Cdc42. Importantly, the inhibition of rho-kinase (ROCK), a direct downstream regulator of RhoA, significantly increased the lifespan of SMA mice and shows beneficial potential as a therapeutic strategy for SMA. In an addition, we have uncovered a muscle- and motor neuron-independent role for SMN in the regulation of pancreatic development and glucose metabolism in SMA mice and type 1 SMA patients. This finding highlights the importance of combining a glucose tolerance assessment of SMA patients with their existing clinical care management. Thus, our work has uncovered two novel and equally important roles for the SMN protein, both of which contribute significantly to SMA pathogenesis.

A via de sinalização da GTPase RhoA atua em diversos processos celulares. Para avaliar o comportamento de RhoA, após estresse causado por radiação ultravioleta, foram gerados clones mutantes que expressam RhoA em seu estado constitutivamente ativo e dominante negativo. Após exposição das linhagens à radiação ultravioleta, observou-se uma maior sensibilidade e um maior tempo de recuperação das linhagens quando a atividade de RhoA é reduzida. Estes prejuízos no reparo prejudicaram a proliferação e sobrevivência celular quando da deficiência na atividade de RhoA. Em linhagens deficientes na via de NER, percebemos que estas linhagens possuem uma capacidade ainda mais reduzida de reparo quando a atividade de RhoA é inibida. / The RhoA GTPase signaling pathway acts on many cellular processes. To evaluate this possible RhoA function after stress caused by ultraviolet radiation, mutant clones expressing RhoA in its constitutively active or dominant negative forms were generated. After exposure of the cells to ultraviolet radiation, cell lines showed a higher sensitivity and a delayed recovery capacity when the RhoA activity is reduced. The impaired repair reduced the cells proliferation and survival under RhoA deficiency. In cell lines deficient in NER pathway, we notice that these cell lines, have a further reduced ability to repair damaged DNA under RhoA inhibition.

Chez les eucaryotes, l’information génétique est transcrite en ARN messager qui subit plusieurs étapes de maturation et évènements d’assemblage avant d’être exporté hors du noyau. Ces modifications du transcrit sont effectuées par de nombreux facteurs protéiques recrutés au transcrit naissant, formant ainsi une particule ribonucléoprotéique (mRNP). La biogenèse du mRNP est étroitement liée avec la transcription et le contrôle qualité afin d’assurer l’efficacité et l’exactitude de la production de mRNPs matures. Des études récentes suggèrent que les membres du complexe THO-Sub2 pourraient être des facteurs cruciaux dans le couplage de la transcription, de la biogénèse du mRNP et de l’export. Dans notre groupe, nous avons mis en oeuvre un essai novateur pour étudier la biogénèse du mRNP et le contrôle qualité, basé sur l’expression du facteur Rho bactérien dans Saccharomyces cerevisiae. Rho interfère avec l’assemblage adéquat du mRNP et génère des transcrits aberrants qui sont dégradés par la machinerie de dégradation nucléaire. Dans cette étude, nous avons utilisé le système expérimental Rho pour mieux comprendre Rrp6 et l’implication de l’exosome dans la dégradation des transcrits liée au contrôle qualité, ainsi que pour mieux caractériser le rôle et la fonction du complexe THO-Sub2 dans le processus de biogénèse du mRNP. Les résultats obtenus révèlent une différence intéressante dans le comportement des membres du complexe THO sous l’action de Rho et dévoilent leur dépendance à la liaison à l’ARN, ce qui n’aurait pas pu être observé avec d’autres techniques expérimentales. Cela confirme le potentiel attendu du système expérimental basé sur Rho dans l’étude des facteurs protéiques impliqués dans la biogénèse et le contrôle qualité du mRNP. / In eukaryotes, the genetic information is transcribed into messenger RNA which undergoes various processing and assembly events prior to its export from the nucleus. These transcript modifications are performed by numerous protein factors recruited to the nascent transcript, thus making a messenger ribonucleoprotein particle (mRNP). mRNP biogenesis is tightly interconnected with both transcription and quality control to ensure efficiency and accuracy in production of mature mRNPs. Recent findings suggest that members of THO-Sub2 complex might be crucial factors in coupling transcription, mRNP biogenesis and export. In our group, we have implemented an innovative assay to study mRNP biogenesis and quality control, based on the expression of the bacterial factor Rho in Saccharomyces cerevisiae. Rho interferes with proper mRNP assembly and generates aberrant transcripts degraded by the nuclear degradation machinery. In this study, we use Rho experimental system to expand our findings on Rrp6 and exosome involvement in quality control degradation of transcripts, as well as to better characterize the role and function of THO-Sub2 complex in the process of mRNP biogenesis. Obtained results reveal an interesting difference in behavior of THO complex members upon Rho action and disclose their dependence on binding to the RNA, which could not be observed by other experimental techniques. This substantiates the expected potential of Rho-based experimental system in the study of protein factors involved in mRNP biogenesis and quality control.

No description available.