Using ����C cross polarization magic angle spinning nuclear magnetic resonance techniques on 5 species of dead trees from the northwest (western hemlock, Douglas fir, Sitka spruce, lodgepole pine and ponderosa pine) I tracked the lignin and cellulose content over a 22 to 36 year period in order to determine the effects of decay fungi, if any, that is attacking certain species of tree. I had samples from the wood of the roots, the bark on the roots and, in some cases, the resin core of the roots. The Department of Forest Science at Oregon State University has studied this problem by using wet chemical analysis, and direct visual observation. Mark Harmon and Hua Chen of the Department of Forest Science believe that white rot occurred most frequently in the lodgepole pine and ponderosa pine and brown rot was more frequent in the Douglas-fir and Sitka spruce. Western hemlock seemed to have both brown and white rots active. The Douglas fir bark sample showed definite decomposition consistent with white rot during the first 10 years. The ponderosa pine sap showed decomposition consistent with white rot in the 10 to 22 year period. Sitka Spruce showed some decomposition consistent with white rot in the bark from 7 to 33 years, and the western hemlock showed some decomposition consistent with white rot in the sap in the first 10 years. The decompositions consistent with brown rot were much easier to see in this study. Virtually all the sap and bark samples showed decomposition consistent with brown rot at some point. The Douglas fir was the only species, other than lodgepole pine, not to show any decomposition consistent with brown rot in the bark of the tree, only decomposition consistent with white rot. The Douglas fir did show a decay consistent with brown rot in the sap for the first ten years. Ponderosa pine showed evidence of decay that brown rot would cause for the first 10 years in the sap and the bark. The Sitka spruce species analysis showed brown rot type decay in the bark for the first 7 years and in the sap for the entire time studied of 33 years. The lodgepole pine was the only species to not show any brown rot type decay in the sap or bark for the entire 22 year period studied. The western hemlock was distinct by not showing any definitive brown rot type decay for the first 10 years, but showed massive decay consistent with brown rot in both sap and bark during the following 26 years studied. I used an 8 Tesla magnet and the MAS frequency was at 5 kHz. The recycle time was 1.5 seconds and the contact time was 1 ms. I generally took about 10,000 acquisitions per sample, which added up to about 4 hours total acquisition time per sample. Presence of these rots shows that certain species are more susceptible than others, and also shows that local environmental conditions can contribute to rot susceptibility. / Graduation date: 2003

The meals from many oilseed crops contain biocidal chemicals that are known to inhibit the growth and activity of several soil pathogens, though little is known concerning impacts on whole soil microbial communities. We investigated the effect of oilseed meals (SMs) from both brassicaceous plants, including mustard and camelina, as well as non-brassicaceous plants, including jatropha and flax, on P. omnivora (the casual agent of cotton root rot) in Branyon clay soil (at 1 and 5% application rates). We also investigated the effect of SMs from camelina, jatropha, flax, and wheat straw on microbial communities in Weswood loam soil. We also used four types of isothiocyanates (ITCs) including allyl, butyl, phenyl, and benzyl ITC to test their effects on P. omnivora growth on potato dextrose agar (PDA), as well as on soil microbial communities in a microcosm study. Community qPCR assays were used to evaluate relative abundances of soil microbial populations. Soil microbial community composition was determined through tag-pyrosequencing using 454 GS FLX titanium technology, targeting ITS and 16S rRNA gene regions for fungal and bacterial communities, respectively. The results showed that all tested brassicaceous and jatropha SMs were able to inhibit P. omnivora sclerotial germination and hyphal growth, with mustard SM being the most effective. Flax didn't show any inhibitory effects on sclerotial germination. All tested ITCs inhibited P. omnivora OKAlf8 hyphal growth, and the level of inhibition varied with concentration and ITC type. Total soil fungal populations were reduced by ITC addition, and microbial community compositions were changed following SM and ITC application. These changes varied according to the type of SM or ITC added. Our results indicated that SMs of several brassicaceous species as well as jatropha may have potential for reducing cotton root rot as well as some other pathogens. Different SMs releasing varied ITCs may result in differential impacts on soil microorganisms including some pathogens.

This thesis is an investigation of detecting and quantifying airborne inoculum of Sclerotinia sclerotiorum (Lib.) de Bary to improve the Sclerotinia rot of carrot (SRC) forecast model. A quantitative polymerase chain reaction (qPCR) assay was developed to specifically detect and quantify DNA from airborne ascospores of S. sclerotiorum. The qPCR assay was evaluated on air samples collected using a Burkard Sampler, and showed that ascospores of S. sclerotiorum were specifically detected among a pool of foreign DNA. The concentration of detected ascospores was related to the observed incidence of SRC to suggest a preliminary threshold of 2 to 4 ascospores m-3 of air for SRC development. Evaluation of an Andersen Sampler, the blue plate test (BPT) and the qPCR assay showed that the latter two methods were equally effective in detecting and quantifying ascospores of S. sclerotiorum and consistently detected greater numbers of ascospores than an Andersen Sampler. Three days are required to confirm the presence of S. sclerotiorum using the BPT, while results from the qPCR assay can potentially provide results within five hours of air sampling. The choice of detection method depends on the available resources and need for a quick result. Analysis of data from nine years of air sampling using the BPT indicated that a single air sampling site is sufficient to detect ascospores when counts are low, increasing to two sites during periods when ascospores are detected near threshold levels and crop and environmental conditions are conducive to disease. Chitosan and canopy trimming were evaluated to manage SRC under field conditions. Chitosan reduced area under the disease progress curve (AUDPC) by 55 and 42% in 2009 and 2011, respectively, which was comparable to a standard fungicide. Trimming enhanced chitosan efficacy, reducing AUDPC by 88 and 82% in 2009 and 2011, respectively. Trimming as a stand-alone treatment reduced AUDPC by 66% in 2011. Under controlled environmental conditions, chitosan inconsistently enhanced defense responses against S. sclerotinia. The results show that chitosan has potential to be integrated into SRC management systems, particularly when combined with foliar trimming in years with moderate to high disease risk. / National Research Council of Canada; University of Guelph; Department of Plant Agriculture; Ontario Ministry of Agriculture, Food and Rural Affairs

Methamphetamine (MA) abuse is a fast growing drug problem, and is the second most widely abused drug world-wide. MA abuse has been linked to the development of symptoms indistinguishable from schizophrenia, referred to as MA psychosis. MA abusing individuals, who most often comprise adolescents and young adults, are 11 times more likely than the general population to develop psychosis. Of further concern is that in utero exposure to MA is also a growing problem, with more women addicts choosing MA as their primary drug. This has significant implications for the neurodevelopment of the child, with subsequent behavioural deficits later in life. Epidemiological studies suggests that in utero or early life MA exposure places a vulnerable individual at greater risk for developing schizophrenia, although this has never been formerly studied either at clinical or pre-clinical level. Animal models of early life adversity, such as post-weaning social isolation rearing (SIR), can assist in understanding the underlying mechanisms in MA abuse and vulnerability to develop MA psychosis. The aim of the current study was to investigate the long term effects of either prenatal (in utero) or early postnatal administration of MA on the development of schizophrenia-like behavioural and neurochemical abnormalities later in life. In the in utero study, pregnant female Wistar rats received either saline (Sal) or MA 5 mg/kg/day for 16 days by subcutaneous (s.c.) injection , starting on prenatal day 13 (PreND-13) up to postnatal day 2 (PostND02). Male offspring were selected for the study. On PostND 21, the animals were weaned and reared under group or isolation reared conditions for 8 weeks. In the early postnatal study, adult male Wistar rats were divided into group reared and SIR conditions from PostND21. Either group received an escalating dose of MA twice a day (0.2 mg/kg – 6 mg/kg s.c.) or Sal for 16 days, from PostND35 to PostND50. Both in utero and early postnatal groups were then subjected to various behavioural tests on PostND78, including assessment of social interaction (SI) and prepulse inhibition (PPI) of acoustic startle. Following behavioural testing, rats were sacrificed and brains snap frozen for later analysis of cortico-striatal monoamine concentrations, superoxide dismutase activity and lipid peroxidation. In the prenatally exposed group no differences in %PPI was observed, although group reared animals receiving MA and SIR animals receiving Sal or MA showed a decrease in social interactive behaviours, including approaching, time together and anogenital sniffing. SIR animals receiving Sal or MA also showed a decrease in rearing. Regarding self-directed behaviours, group reared animals receiving MA and SIR animals receiving Sal or MA showed an increase in self-grooming. Although some disturbances in regional brain monoamines were observed in the frontal cortex and striatum across the groups, this did not reach significance. A significant increase in malondialdehyde was observed in the striatum in group reared animals receiving MA as well as SIR animals receiving Sal or MA, indicating cell damage, possibly of redox origin. In the early postnatal study, %PPI was significantly reduced in group reared animals receiving MA as well as in SIR animals receiving Sal or MA. Group reared animals receiving MA and SIR animals receiving Sal or MA showed a decrease in social interactive behaviours, including rearing, approaching, time together and anogenital sniffing. Regarding self-directed behaviours and locomotor activity, self-grooming and squares crossed was significantly increased in group reared animals receiving MA and SIR animals receiving Sal or MA. A significant increase in DA was evident in the frontal cortex of SIR and grouped housed animals receiving MA. DA in the MA + SIR combination was elevated but not significantly so. None of the treatments affected striatal monoamine levels. In the group reared animals receiving MA as well as the SIR animals receiving Sal or MA, a significant decrease in SOD activity was observed in the frontal cortex, indicating the presence of oxidative stress in this brain region. None of the parameters indicated an additive effect in MA + SIR treated animals. In conclusion, prenatal exposure to MA led to some evidence of late-life behavioural and neurochemical abnormalities akin to schizophrenia, confirming its penchant for psychotogenic effects. However, chronic postnatal MA exposure was more emphatic, being as effective as SIR, a neurodevelopmental model of schizophrenia, in inducing deficits in the above-mentioned behavioural and neurochemical parameters. Thus, early adolescent abuse of MA is a significant risk factor for the later development of schizophrenia or psychosis. However, the risk appeared not to be exacerbated in a population at risk, i.e. in SIR animals. / Thesis (MSc (Pharmacology))--North-West University, Potchefstroom Campus, 2013.

Methamphetamine (MA) abuse is a fast growing drug problem, and is the second most widely abused drug world-wide. MA abuse has been linked to the development of symptoms indistinguishable from schizophrenia, referred to as MA psychosis. MA abusing individuals, who most often comprise adolescents and young adults, are 11 times more likely than the general population to develop psychosis. Of further concern is that in utero exposure to MA is also a growing problem, with more women addicts choosing MA as their primary drug. This has significant implications for the neurodevelopment of the child, with subsequent behavioural deficits later in life. Epidemiological studies suggests that in utero or early life MA exposure places a vulnerable individual at greater risk for developing schizophrenia, although this has never been formerly studied either at clinical or pre-clinical level. Animal models of early life adversity, such as post-weaning social isolation rearing (SIR), can assist in understanding the underlying mechanisms in MA abuse and vulnerability to develop MA psychosis. The aim of the current study was to investigate the long term effects of either prenatal (in utero) or early postnatal administration of MA on the development of schizophrenia-like behavioural and neurochemical abnormalities later in life. In the in utero study, pregnant female Wistar rats received either saline (Sal) or MA 5 mg/kg/day for 16 days by subcutaneous (s.c.) injection , starting on prenatal day 13 (PreND-13) up to postnatal day 2 (PostND02). Male offspring were selected for the study. On PostND 21, the animals were weaned and reared under group or isolation reared conditions for 8 weeks. In the early postnatal study, adult male Wistar rats were divided into group reared and SIR conditions from PostND21. Either group received an escalating dose of MA twice a day (0.2 mg/kg – 6 mg/kg s.c.) or Sal for 16 days, from PostND35 to PostND50. Both in utero and early postnatal groups were then subjected to various behavioural tests on PostND78, including assessment of social interaction (SI) and prepulse inhibition (PPI) of acoustic startle. Following behavioural testing, rats were sacrificed and brains snap frozen for later analysis of cortico-striatal monoamine concentrations, superoxide dismutase activity and lipid peroxidation. In the prenatally exposed group no differences in %PPI was observed, although group reared animals receiving MA and SIR animals receiving Sal or MA showed a decrease in social interactive behaviours, including approaching, time together and anogenital sniffing. SIR animals receiving Sal or MA also showed a decrease in rearing. Regarding self-directed behaviours, group reared animals receiving MA and SIR animals receiving Sal or MA showed an increase in self-grooming. Although some disturbances in regional brain monoamines were observed in the frontal cortex and striatum across the groups, this did not reach significance. A significant increase in malondialdehyde was observed in the striatum in group reared animals receiving MA as well as SIR animals receiving Sal or MA, indicating cell damage, possibly of redox origin. In the early postnatal study, %PPI was significantly reduced in group reared animals receiving MA as well as in SIR animals receiving Sal or MA. Group reared animals receiving MA and SIR animals receiving Sal or MA showed a decrease in social interactive behaviours, including rearing, approaching, time together and anogenital sniffing. Regarding self-directed behaviours and locomotor activity, self-grooming and squares crossed was significantly increased in group reared animals receiving MA and SIR animals receiving Sal or MA. A significant increase in DA was evident in the frontal cortex of SIR and grouped housed animals receiving MA. DA in the MA + SIR combination was elevated but not significantly so. None of the treatments affected striatal monoamine levels. In the group reared animals receiving MA as well as the SIR animals receiving Sal or MA, a significant decrease in SOD activity was observed in the frontal cortex, indicating the presence of oxidative stress in this brain region. None of the parameters indicated an additive effect in MA + SIR treated animals. In conclusion, prenatal exposure to MA led to some evidence of late-life behavioural and neurochemical abnormalities akin to schizophrenia, confirming its penchant for psychotogenic effects. However, chronic postnatal MA exposure was more emphatic, being as effective as SIR, a neurodevelopmental model of schizophrenia, in inducing deficits in the above-mentioned behavioural and neurochemical parameters. Thus, early adolescent abuse of MA is a significant risk factor for the later development of schizophrenia or psychosis. However, the risk appeared not to be exacerbated in a population at risk, i.e. in SIR animals. / Thesis (MSc (Pharmacology))--North-West University, Potchefstroom Campus, 2013.

E’ stata approfondita l’espressione genica complessiva in spighe di mais, in seguito all’ infezione fungina. Nella prima parte del lavoro, sono stati valutati un genotipo di mais resistente ed uno suscettibile a F. verticillioides, campionando le cariossidi 48 ore dopo l’infezione. Sono state identificate circa 800 sequenze differenzialmente espresse e circa il 10% è stato assegnato alla categoria della difesa. Nel genotipo resistente, i geni coinvolti nella difesa hanno mostrato un tipo di risposta basale, mentre in quello suscettibile tali geni rispondevano specificamente all’infezione. Nella seconda parte del lavoro, l’analisi di espressione è stata estesa a fasi precoci e tardive dell’infezione utilizzando un ceppo normale ed uno mutante di F. verticillioides. Numerosi geni risultavano differenzialmente regolati 48 ore dopo l’infezione con entrambi i ceppi. Il ceppo normale era in grado di attivare i meccanismi di difesa prima del mutante. Nella terza parte del lavoro, 10 linee resistenti e suscettibili sono state infettate con 4 specie fungine. In tutti i genotipi l’espressione dei geni coinvolti nella difesa era indotta in seguito all’infezione, ma le linee resistenti presentavano una risposta basale di difesa. / We investigated global gene expression in maize ears at several time points after fungal infection. In the first part of the work, resistant and susceptible genotypes were tested in kernels sampled 48 h after infection with a wild type strain of F. verticillioides. About 800 differentially expressed sequences were identified and nearly 10% assigned to the category cell rescue, defense and virulence. In the resistant genotype, defense-related genes provided basic defense against the fungus, while in the susceptible genotype defense genes responded specifically to pathogen infection. In the second part of the work the expression analysis was extended to early and late phases of infection with a wild type and a mutant strains of F. verticillioides. Kernels were sampled in the area around the point of infection. Most of genes were differentially regulated 48 h after infection with both fungal strains. The wild type strain was able to activate host defense genes before the mutant strain. In the third part of the work, ten resistant and susceptible lines were infected by different fungal species. All genotypes were able to induce the expression of defense genes upon infection, but the resistant lines showed a basal defense response.

A number of fungi produce spalted wood, which is characterized by accumulation of black pigment in fine demarcation lines, often accompanied by discoloration or staining on the wood fibers. Specific spalting fungi were identified by molecular analysis. From a total of 19 isolates and 140 clones studied, 11 fungal species were identified. The two Chlorociboria species from North America were investigated and their anamorphs were unambiguously identified for the first time. Fungal pigment formation under the influence of moisture content and pH variation was investigated in sugar maple, American beech and agar inoculated with spalting fungi. Maximum pigment production occurred at treatment with pH 4.5 for sugar maple and beech inoculated with Trametes versicolor. Xylaria polymorpha produced external pigmentation in beech treated with buffer at pH 5 and sugar maple at pH 4.5. Fungal pigmentation by Trametes versicolor and Xylaria polymorpha was stimulated at low moisture content in both wood species tested. Melanin production by Inonotus hispidus and Polyporus squamosus was stimulated above 22-28% and 34-38% moisture content in beech and in sugar maple respectively. Fomes fomentarius and Polyporus brumalis produced maximum pigmentation in beech at 26 - 41% and in sugar maple at 59 - 96% moisture content. The variation of the moisture content and pH values of wood substrates can stimulate the intensity of pigmentation of specific fungi in wood. To investigate melanin synthesis from a variety of melanin precursors, experimental research on three spalting fungi tested their reaction to catechol and L-Dopa melanin precursors in wood and agar substrate. The results indicate multiple biosynthesis pathways for melanin assembly in Trametes versicolor, Xylaria polymorha and Inonotus hispidus, and catechol produced most pigmentation in all spalting fungi investigated. Microscopic analysis by light, fluorescence, electron and confocal microscopy also indicates a bi- or multi-modal activity of melanin production and assembly by several spalting fungi. Possible variations of melanin assembly were identified based on fungal and wood species. Immunofluorescence and immunogold labelling with Mab 6D2 melanin antibody confirmed the melanin nature of the pigments produced by Oxyporus populinus, Trametes versicolor, Xylaria polymorpha, Fomes fomentarius, and Inonotus hispidus.

A number of fungi produce spalted wood, which is characterized by accumulation of black pigment in fine demarcation lines, often accompanied by discoloration or staining on the wood fibers. Specific spalting fungi were identified by molecular analysis. From a total of 19 isolates and 140 clones studied, 11 fungal species were identified. The two Chlorociboria species from North America were investigated and their anamorphs were unambiguously identified for the first time. Fungal pigment formation under the influence of moisture content and pH variation was investigated in sugar maple, American beech and agar inoculated with spalting fungi. Maximum pigment production occurred at treatment with pH 4.5 for sugar maple and beech inoculated with Trametes versicolor. Xylaria polymorpha produced external pigmentation in beech treated with buffer at pH 5 and sugar maple at pH 4.5. Fungal pigmentation by Trametes versicolor and Xylaria polymorpha was stimulated at low moisture content in both wood species tested. Melanin production by Inonotus hispidus and Polyporus squamosus was stimulated above 22-28% and 34-38% moisture content in beech and in sugar maple respectively. Fomes fomentarius and Polyporus brumalis produced maximum pigmentation in beech at 26 - 41% and in sugar maple at 59 - 96% moisture content. The variation of the moisture content and pH values of wood substrates can stimulate the intensity of pigmentation of specific fungi in wood. To investigate melanin synthesis from a variety of melanin precursors, experimental research on three spalting fungi tested their reaction to catechol and L-Dopa melanin precursors in wood and agar substrate. The results indicate multiple biosynthesis pathways for melanin assembly in Trametes versicolor, Xylaria polymorha and Inonotus hispidus, and catechol produced most pigmentation in all spalting fungi investigated. Microscopic analysis by light, fluorescence, electron and confocal microscopy also indicates a bi- or multi-modal activity of melanin production and assembly by several spalting fungi. Possible variations of melanin assembly were identified based on fungal and wood species. Immunofluorescence and immunogold labelling with Mab 6D2 melanin antibody confirmed the melanin nature of the pigments produced by Oxyporus populinus, Trametes versicolor, Xylaria polymorpha, Fomes fomentarius, and Inonotus hispidus.

Τα υγρά απόβλητα ελαιοτριβείου (ΥΑΕ) παράγονται κατά την εξαγωγή του ελαιόλαδου από τα παραδοσιακά και τα φυγοκεντρικά ελαιοτριβεία τριών φάσεων. Τα ΥΑΕ έχουν διαφορετικά χαρακτηριστικά τα οποία εξαρτώνται από τη διαδικασία παραγωγής και τον τύπο των ελιών που χρησιμοποιούνται. Τα περισσότερα ελαιοτριβεία στην Ελλάδα χρησιμοποιούν την τριφασική διαδικασία εξαγωγής του ελαιόλαδου. Παρόλα αυτά, κάποια καινούρια χρησιμοποιούν τη διφασική διαδικασία εξαγωγής του ελαιολάδου. Παραδοσιακά ελαιοτριβεία συνεχίζουν να υπάρχουν, αλλά σε μικρότερη έκταση. Τα ΥΑΕ αποτελούν ένα σημαντικό πρόβλημα για την περιοχή της Μεσογείου, όπου παράγεται το 95 % της παγκόσμιας παραγωγής ελαιολάδου, εξαιτίας της υψηλής τους συγκέντρωσης σε χημικά απαιτούμενο οξυγόνο (ΧΑΟ) και της ικανότητάς τους να αντιστέκονται στη βιοαποδόμηση εξαιτίας της υψηλής τους περιεκτικότητας σε φαινολικές ενώσεις. Αυτές οι ενώσεις οφείλονται για το μαύρο χρώμα και τις φυτοτοξικές και αντιβακτηριδιακές ιδιότητες των ΥΑΕ. Διάφορες φυσικοχημικές μέθοδοι έχουν προταθεί για την επεξεργασία των ΥΑΕ, συμπεριλαμβανομένων της απλής συμπύκνωσης, της επίπλευσης και καθίζησης, της εξάτμισης και της χρήσης επιλεγμένων μεμβρανών, της ουδετεροποίησης με την προσθήκη H2SO4, της οξείδωσης με O3 και αντιδραστήριο Fenton, καθώς επίσης και την επαναχρησιμοποίηση των ΥΑΕ με διασκορπισμό σε αγροτικά εδάφη σαν λίπασμα. Σε ότι αφορά τις βιολογικές μεθόδους, οι αναερόβιες βιολογικές διεργασίες είναι ιδιαίτερα αποδοτικές εξαιτίας των γνωστών πλεονεκτημάτων που εμφανίζουν και σχετίζονται με την εξοικονόμηση ενέργειας και χημικών και της μικρής παραγωγής λάσπης, ειδικότερα όταν αφορά την επεξεργασία αποβλήτων με υψηλή συγκέντρωση ΧΑΟ. Η εποχιακή λειτουργία των ελαιοτριβείων (Νοέμβριος – Φεβρουάριος) δεν αποτελεί μειονέκτημα για τις αναερόβιες διεργασίες εξαιτίας των χαμηλών παρατηρούμενων ρυθμών αποδόμησης των μεθανογόνων μικροοργανισμών και της εύκολης επαναλειτουργίας των αναερόβιων χωνευτήρων μετά από αρκετούς μήνες μη λειτουργίας. Παρόλο που η αναερόβια χώνευση χρησιμοποιείται κατά κύριο λόγο για τη μείωση του υψηλού οργανικού φορτίου των ΥΑΕ, η παρουσία ενώσεων στα ΥΑΕ τοξικών προς τους μεθανογόνους φαίνεται να είναι ένα σημαντικό πρόβλημα για την αναερόβια επεξεργασία των ΥΑΕ. Μία προσέγγιση στο πρόβλημα θα ήταν η αραίωση του αποβλήτου ώστε να μειωθεί η συγκέντρωση των φαινολικών ενώσεων και των λιπαρών οξέων. Σε αυτή την περίπτωση εξετάζεται και η απομάκρυνση των στερών του αποβλήτου πριν την αναερόβια χώνευση. Μία δεύτερη προσέγγιση θα ήταν η εφαρμογή αερόβιας προεπεξεργασίας του αποβλήτου ώστε να απομακρυνθούν ενώσεις που είναι τοξικές για τα μεθανογόνα βακτήρια. Πιο συγκεκριμένα, ένα πρώτο στάδιο αερόβιας προεπεξεργασίας του ΥΑΕ με μύκητα λευκής σήψης, έχει προταθεί ως η πιο κατάλληλη μικροβιακή διεργασία προεπεξεργασίας για την επιλεκτική απομάκρυνση των φαινολικών. Στόχος της παρούσας διατριβής ήταν να μελετηθεί η ικανότητα του μύκητα λευκής σήψης Pleurotus ostreatus κάτω από άσηπτες ή μη συνθήκες να λειτουργήσει σε έναν καινοτόμο βιοαντιδραστήρα καθοδικής ροής και να διευρενηθεί η αποδοτικότητα εναλλακτικά της αραίωσης ή/και της προεπεξεργασίας στην αναερόβια χώνευση ΥΑΕ σε αναδευόμενο μεσόφιλο αντιδραστήρα. Επίσης, μελετήθηκε η αναερόβια χώνευση ΥΑΕ σε αντιδραστήρα τύπου ASBR και αντιδραστήρα PABR, αντίστοιχα. Μία καινοτόμος μέθοδος ακινητοποίησης των μυκήτων αποδείχτηκε κατάλληλη για την ανάπτυξη μιας αποδοτικής διεργασίας προεπεξεργασίας για την απομάκρυνση των φαινολικών. Η αναερόβια χώνευση είναι η πιο αποδοτική διεργασία για την επεξεργασία υγρών αποβλήτων ελαιοτριβείου. Παρόλα αυτά, αραίωση ή/και κάποιου τύπου προεπεξεργασία είναι απαραίτητη για την αποφυγή τοξικότητας των φαινολικών στους μεθανογόνους. Θερμική προεπεξεργασία ακολουθούμενη από καθίζηση ώστε να απομακρυνθεί το στερεό περιεχόμενο, από την άλλη, αποδείχτηκε ένας μη επιθυμητός τρόπος προεπεξεργασίας. Επιπλέον, αραιωμένο ΥΑΕ 1:1, χωρίς την απομάκρυνση των στερεών μπορεί να υποστεί επεξεργασία αποδοτικά σε υδραυλικό χρόνο παραμονής 30 ημέρες, εξασφαλίζοντας σταθερή παραγωγή βιοαερίου. Βιολογική προεπεξεργασία με μύκητα μπορεί να οδηγήσει σε σταθερή διεργασία σε υδραυλικό χρόνο παραμονής 30 ημέρες. Η αναερόβια επεξεργασία του αποβλήτου σε αντιδραστήρα ASBR είναι εφικτή με ισοδύναμο χρόνο παραμονής 30 ημερών χωρίς να αραιωθεί το απόβλητο. Η επεξεργασία σε αντιδραστήρα PABR είναι ωστόσο πιο αποδοτική εξαιτίας του σχεδόν κατά μία τάξη μεγέθους μικρότερο υδραυλικού χρόνου παραμονής (3.75 ημέρες), που αυτός μπορεί να λειτουργήσει και της μεγαλύτερης απόδοσης του σε βιοαέριο. Το αναερόβια επεξεργασμένο απόβλητο μπορεί να καταστεί κατάλληλο για διάθεση μετά από κατάλληλη επεξεργασία μεμβρανών (συνδυασμός υπερδιήθησης και αντίστροφης όσμωσης). / Olive mill wastewater (OMW) is produced during the extraction of oil from the olive fruit by the traditional mill and press process. ΟΜW has a wide range of characteristics depending on the type of the mill and the type of olive and equipment employed. Most of the mills in Greece use a 3-phase extraction process. However, some of the newer ones use the 2-phase extraction process. Traditional mills are still present but to a limited extent. OΜW treatment and disposal has become a critical environmental problem in the Mediterranean area that accounts for approximately 95% of the world olive oil production. This is because of its high organic chemical oxygen demand (COD) concentration, and because of its resistance to biodegradation due to its high content in phenolic compounds. These compounds are responsible for its dark color, and its phytotoxic and antibacterial properties. Various physico-chemical methods have been proposed for treating OMW, including simple evaporation, flotation and settling, vaporization and use of selected membranes, neutralization with addition of H2SO4, oxidation by O3 and Fenton reagent, as well as reuse of the OMW by spreading onto agricultural soil as an organic fertilizer. As far as biological processes are concerned, anaerobic biological processes are particularly suitable because of their well known advantages related to energy and chemicals saving and to the low production of sludge, especially when it comes to treatment of high COD wastewaters. The seasonal nature of the operation of olive mills (typically November to February) is not a disadvantage for anaerobic processes because the observed decay rates for methanogens are very low and a digester can be easily restarted following several months of shut-down. Although anaerobic digestion may be in principle used for reducing the high organic content of OMW, the presence of compounds toxic to methanogens in OMW appears to be a significant problem for the anaerobic digestion of OMW. One approach to the problem has been to sufficiently dilute the OMW to reduce the concentration of phenolics and fatty acids. In this case, the possibility of prior solids removal needs to be examined. A second approach has been the use of aerobic pretreatment of OMW to remove compounds that are toxic to methanogenic consortia. In particular, a preceding aerobic treatment of OMW with white-rot fungi, has been proposed as the most suitable microbial pretreatment process for the selective removal of phenolics. The aim of the present study was to study the ability of the white rot fungus Pleurotus ostreatus under aseptic or non aseptic conditions to function in a novel trickling filter immobilized fungi bioreactor and to investigate the feasibility of alternative dilution and/or pretreatment processes for the anaerobic digestion of olive-mill wastewater in a stirred tank mesophilic digester. The anaerobic digestion of OMW in an anaerobic sequencing batch reactor (ASBR) and in a periodic anaerobic baffled reactor (PABR) was also studied. A novel fungi immobilization method proved very suitable for the development of an efficient pretreatment process for phenolics removal. Anaerobic digestion is the most effective process for the treatment of olive mill wastewater. However, dilution and/or some type of pretreatment are necessary to avoid toxicity of the phenolics on the methanogens. Thermal pretreatment followed by sedimentation to remove the solids content, on the other hand proved to be an undesirable type of pretreatment. Diluted 1:1 raw OMW on the other hand, without any solids removal, can be effectively treated at an HRT of 30d, securing a stable high biogas yielding operation. Biological pre-treatment with fungi may lead to a stable process at an HRT of 30d. Anaerobic digestion of OMW using an ASBR (anaerobic sequencing batch reactor) is feasible at an equivalent HRT of 30d with the advantage that it can treat nondiluted wastewater. Treatment in a PABR, however, is much more effective as it requires an order-of –magnitude lower HRT ( 3.75 d) and yields large amounts of biogas. The anaerobically treated effluent is still not suitable for disposal. A membrane process such as reverse osmosis may be effectively used to render the anaerobically treated wastewater readily disposable.

Orientador: Adriana Zanin Kronka / Banca: Danila Comelis Bertolin / Banca: Marileia Regina Ferreira / Banca: Martha Maria Passador / Banca: Silvia Renata Siciliano Wilcken / Resumo: O feijoeiro comum (Phaseolus vulgaris L.) está sujeito à ocorrência de doenças, cujos agentes causais podem ser transportados e transmitidos via sementes, além de comprometer o potencial fisiológico destas. Dentre os patógenos que influenciam negativamente, se presentes nas sementes de feijão, está o fungo Macrophomina phaseolina (Tassi) Goid., que pode ser transmitido às plantas, causando a podridão cinzenta da haste do feijoeiro, uma doença com sérios impactos na cultura. Apesar do tratamento químico de sementes ser uma prática eficiente no controle de patógenos, o emprego de substâncias naturais com ação fungicida e de antagonistas de fitopatógenos surge como uma opção de manejo sustentável. Diante do exposto, o objetivo desta pesquisa foi avaliar o efeito do tratamento de sementes de feijão com óleos essenciais (Capítulo I) e antagonistas (Capítulo II) sobre a incidência do fungo M. phaseolina e o potencial fisiológico das sementes tratadas. No primeiro capítulo, inicialmente, investigou-se a ação in vitro dos óleos essenciais de cravo da índia, pimenta preta e gerânio sobre o crescimento micelial e a esporulação do fungo. Dois tratamentos testemunha foram incluídos: fungicida tiofanato metílico + fluazinam e BDA puro. Verificou-se inibição total do crescimento micelial pelos óleos essenciais de cravo da índia e pimenta preta, com ação semelhante ao fungicida. O óleo essencial de gerânio não apresentou efeito inibitório satisfatório sobre o fungo. Os óleos essenciais de c... (Resumo completo, clicar acesso eletrônico abaixo) / Abstract: Common bean crop (Phaseolus vulgaris L.) is subject to diseases occurrence, whose causal agents can be transported and transmitted through seeds, besides compromising their physiological potential. Macrophomina phaseolina (Tassi) Goid. is one of the pathogens that negatively influences this potential, if present in common bean seeds. This fungus can be transmitted to the plants, causing charcoal rot of common bean, a disease with serious impacts on this crop. Although the chemical treatment of seeds is an efficient practice in the pathogens control, the use of natural substances with fungicidal action and antagonists of phytopathogens appears as a sustainable management option. This research aimed to evaluate the effect of common bean seeds treatment with essential oils (Chapter I) as well as antagonists (Chapter II) on the incidence of M. phaseolina and the physiological potential of the treated seeds. In the first chapter, the in vitro action of clove, black pepper and geranium essential oils on mycelial growth and fungal sporulation was investigated. Two control treatments were included: methyl thiophanate + fluazinam fungicide and pure potato-dextrose-agar (PDA). Total inhibition of mycelial growth was verified by clove and black pepper essential oils, which showed a fungicide-like action. The geranium essential oil had no satisfactory inhibitory effect on the fungus. Clove and black pepper essential oils were used in the common bean seeds treatment in order to determine their potential for M. phaseolina control and possible effects on the physiological quality of treated seeds. The essential oils treatments were compared with the methyl thiophanate + fluazinam fungicide one. Inoculated and uninoculated seeds were also evaluated. The essential oils reduced the fungus incidence in the seeds, however, clove essential oil caused a germination reduction. In spite of this, there was no negative ... / Doutor