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Towards marker assisted selection for nematode resistance in soybean.Mienie, Charlotte Maria Susanna. 19 December 2013 (has links)
Meloidogyne javanica is the most widely spread nematode pest on soybean in South Africa. Only a few registered cultivars have some resistance to this nematode and there is an urgent need for an efficient breeding programme for resistant cultivars of all maturity groups. However, breeding is hampered by
laborious screening procedures for selection of resistant lines. The objective of this study was to develop an economically viable molecular marker system for application in selection procedures. Three techniques of marker identification were investigated, i.e. RAPD, RFLP and AFLP analysis. The RAPD technique proved to be applicable in fingerprinting soybean varieties, but was too sensitive for interplant variation to
be used as an efficient system for identification of molecular markers linked to nematode resistance. Both RFLP and AFLP screening identified markers linked to gall index variation in a segregating population of 60 F₂ progeny from across between a resistant cultivar, Gazelle, and a highly susceptible variety, Prima. A codominant RFLP marker( B212) was linked significantly to resistance and explained 62% of the variation in gall index. Seven AFLP markers were linked significantly to the resistance trait, of which four were linked in repulsion phase and three in coupling phase. All seven AFLP markers mapped to LG-F on the public soybean molecular map. The QTL for resistance mapped between markers E-ACC/M-CTC2 linked in coupling phase, 8212 and E-AAC/M-CAT1, linked in repulsion phase. These two AFLP markers bracketing the major resistance QTL were successfully converted to SCARs. Marker E-ACC/M-CTC2 was converted to a codominant SCAR marker SOJA6, which acounted for 41% of variation in gall index in the
mapping population. Marker E-AAC/M-CAT1 was converted to a dominant SCAR marker (SOJA7) and explained 42% of gall index variation in the mapping population. These two markers mapped approximately 3.8 cM and 2.4 cM respectively from the resistance QTL. This study represents the first report of the development of PCR-based sequence specific markers linked to resistance to M. javanica in soybean. / Thesis (Ph.D.)-University of Natal, Pietermaritzburg, 2000.
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Physiological and molecular characterization of habituated and non- habituated soybean callus lines (Glycine max (L.) Merr cv. Acme)Du Plessis, Sandra. 20 December 2013 (has links)
A cytokinin habituated soybean callus has been isolated, utilizing the
cytokinin soybean bioassay. The habituated callus line was subsequently
characterized with a non-habituated callus line in relationship to levels of
endogenous growth substances, ultrastructure, nitrogen metabolism and
pattern of gene expression.
The cytokinin habituated soybean callus contained a higher level of
endogenous cytokinin-like activity in comparison to the non-habituated callus.
This higher level of cytokinin present is in part due to a lower rate of
degradation. The habituated callus tissue produced very low levels of
ethylene, while the non-habituated callus produced ethylene at a much higher
rate (57 fold higher), than the habituated callus. In contrast to what was found
in habituated sugarbeet callus, only low levels of putrescine could be
detected in both callus types. The putrescine content of habituated callus
tissue was lower than that of non-habituated callus tissue.
The ultrastructure of habituated callus cells exhibited several differences to
what was observed in the non-habituated callus. Habituated callus cells
appeared to have a thinner cell wall than that of the non-habituated callus
cells. The cristae of the mitochondria in habituated cells were thicker than
that of the non-habituated callus cells, indicating a lower metabolic activity.
On day 14 of the growth period the nuclei of habituated callus demonstrated
active RNA synthesis as indicated by the presence of several vacuolated
nucleoli.
Although no significant differences between proline levels of habituated
callus and proline levels of non-habituated callus were observed, it was
demonstrated that there was a difference in proline metabolism between the
habituated and non-habituated calli. Utilizing an inhibitor of OAT, gabaculine,
it was shown that in habituated callus tissue proline originated from ornithine
during the first 14 days of growth. During the second half of the growth
period, which characteristically consists of tissue with low biosynthetic
activity, proline originated from glutamate. The production of proline in
habituated callus from ornithine also corresponded to a period of high NH₄⁺
content in both callus types, while the production of proline from glutamate
corresponded to a period of low NH₄⁺ content in the cells of both callus types.
No such correlation was observed in proline metabolism of non-habituated
callus.
A similar turning point was observed in the activity of OAT of both callus
types. Although the specific activity of OAT in both callus types mirrored their
changes in RNA concentration, the percentage inhibition of OAT by
gabaculine was not significant from day 14 in both callus types. This may
indicate a change in the catalyzing properties of OAT in both callus types. It
was further demonstrated that the non-habituated callus tissue contained
some inhibitor inactivating OAT activity.
With the use of gabaculine it was further shown that, in contrast to what was
found in other habituated calli, there is no metabolic link between proline
metabolism and putrescine synthesis.
Both the habituated callus and the non-habituated callus exhibited a high
nitrogen influx during the first 14 days of the growth period. The low NH₄⁺
content present in both callus types during the second half of the growth
period coincided with higher levels of amino acids present in both callus
types. The levels of precursor amino acids (glutamate, aspartate and alanine)
did not fluctuate during the growth period, indicating a tight control on amino
acid pools. Levels of amino acids further down the path of metabolism did not
fluctuate drastically and there appeared to be very little difference between
the levels of different amino acids measured in the habituated and nonhabituated
calli. Serine was the dominant amino acid in both callus types. Total RNA concentrations of habituated callus were low in comparison to that
of the non-habituated callus, except for a striking 12 fold increase on day 14
of the growth period. RNA concentrations of non-habituated callus increased
gradually during the growth period and the highest concentration was
recorded 21 days after subculturing. Several polypeptides were observed in
the habituated callus that were not present in the non-habituated callus,
utilizing IEF. Three polypeptides exhibited a change in concentration from
day 6 to day 14 of the growth period in both the habituated and nonhabituated
callus. These polypeptides appeared to decrease in nonhabituated
callus, while they increased in the habituated callus.
A complete cDNA library was constructed for both of the habituated and nonhabituated
callus lines. Six different clones, that were over expressed in the
habituated callus tissue, were isolated via subtractive techniques. One clone
was characterized and showed homology to the glutamate/aspartate transport protein, the membrane component, of E. coli. / Thesis (Ph.D.)-University of Natal, Pietermaritzburg, 1998.
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INFLUENCE OF VARIOUS PLANT POPULATIONS ON WEED REMOVAL TIMING IN GLYPHOSATE-RESISTANT SOYBEANSarver, Jason 01 January 2009 (has links)
Reduced plant population in glyphosate-resistant soybean [Glycine max (L) Merr.] may influence the critical time of herbicide application. Field studies were conducted in 2007 and 2008 at two locations in Kentucky to determine the effect of four weed control programs on soybean seed yield, seed quality, crop canopy, and weed pressure when planted at three densities - 185,000, 309,000, and 432,000 plants ha-1. Plots were treated with glyphosate at either 3 weeks after planting (WAP), 5 WAP, 7 WAP, 3 & 7 WAP, representing common weed control protocols within the state. No differences in seed yield were discovered between plant densities in two of four siteyears. 254,500 plants ha-1 was sufficient for maximum yields in all site-years and was also sufficient to achieve maximum canopy amongst those populations tested in the study. Sequential applications at 3 and 7 WAP provided the highest seed yield, while the 5 WAP and 7 WAP application timings were generally the single applications that allowed for the highest yield and canopy closure, along with the highest visual estimate of weeds controlled. Plant density did not influence the critical period for weed control.
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Efficiency of water and nitrogen use by wheat and legumes in ZambiaMunyinda, Kalaluka. January 1987 (has links)
Maximum wheat (Triticum aestivum L.) yields in Zambia were obtained with weekly irrigation at 85% of class A pan evaporation during the whole irrigation interval and split application of urea N of which the initial portion of the fertilizer was either broadcast and incorporated or broadcast after the crop had established itself. This corresponded with maximum utilization of fertilizer N. The proportion of N derived from fertilizer was independent of fertilizer placement at various water regimes and N utilization was primarily a function of water availability. / Two nonnodulating soybean (Glycine max L.) cultivars, Clark RJ1 and N77, or in their absence Pearl millet (Panicum glaucum L.) were judged to be appropriate reference crops for estimating N$ sb2$ fixation by soybeans using $ sp{15}{ rm N}$ isotope dilution techniques. A local soybean cultivar, Magoye, was rated highest among three cultivars tested for its ability to support N$ sb2$ fixation by Bradyrhizobium japonicum and contributed biologically fixed N$ sb2$ to a subsequent wheat crop.
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Field emergence of horseweed [Conyza canadensis (L.) Cronq.] and control utilizing tillage and herbicidesEubank, Thomas William, January 2006 (has links)
Thesis (M.S.)--Mississippi State University. Department of Plant and Soil Sciences. / Title from title screen. Includes bibliographical references.
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Impact of six cropping sequences on soybean cyst nematode, soil arthropods, and earthwormsCardozo-Tacaná, José, January 1996 (has links)
Thesis (Ph. D.)--University of Missouri-Columbia, 1996. / Typescript. Vita. Includes bibliographical references (leaves 160-168). Also available on the Internet.
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Impact of six cropping sequences on soybean cyst nematode, soil arthropods, and earthworms /Cardozo-Tacaná, José, January 1996 (has links)
Thesis (Ph. D.)--University of Missouri-Columbia, 1996. / Typescript. Vita. Includes bibliographical references (leaves 160-168). Also available on the Internet.
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ON THE PATHOGENESIS OF SOYBEAN CYST NEMATODE AND MECHANISMS OF RESISTANCE BY SOYBEANColantonio, Vincent 01 May 2017 (has links)
Soybean cyst nematode (SCN), Heterodera glycines Ichinohe, is the most devastating pathogen of soybeans, Glycine max (L.) Merr., causing over $1 billion in yield losses annually in the United States alone. Currently, planting of genetically resistant cultivars is the most commonly employed management strategy. Due to an overuse of genetic resistance derived from the soybean variety ‘PI 88788’, many populations of soybean cyst nematodes are becoming virulent on previously resistant cultivars, urging the understanding and discovery of alternative mechanisms of SCN resistance. In this study, we will delve into the history and epidemiology of Heterodera glycines, learn about the molecular etiology underlying SCN pathogenesis, begin to understand the mechanism of resistance by Peking-type soybeans, and look to discover a novel mechanism of resistance by establishment of a mutagenized population of the soybean variety ‘PI 567516C’.
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Análise energética comparativa na logística de transporte multimodal da sojaBovolenta, Fábio César [UNESP] 15 February 2007 (has links) (PDF)
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bovolenta_fc_me_botfca.pdf: 865517 bytes, checksum: 9e87bc5db77a17bb3fd0db1388332215 (MD5) / O presente trabalho objetivou analisar o fluxo energético considerando as rotas atualmente existentes para o escoamento de soja da região centro-oeste do Brasil, mais precisamente, do município de Rio Verde (GO) até o porto de Santos (SP), visto que, é um grande pólo exportador de granéis sólidos. Foram selecionadas duas rotas para a análise, uma contemplando a multimodalidade, ou seja, os modais rodoviário, ferroviário e hidroviário, e outra, uma única modalidade, o modal rodoviário. A conversão dos fatores físicos e operacionais envolvidos nos sistemas logísticos, multimodal e unimodal de transportes estudados se deu por meio de coeficientes energéticos levantados junto à literatura. Os resultados obtidos indicaram, pela rota 1 multimodal, com gasto energético específico maior o modal rodoviário (0,50 MJ.km-1.t-1), seguido pelo modal ferroviário (0,42 MJ.km-1.t-1) e, em terceiro, o modal hidroviário (0,22 MJ.km-1.t-1). Pela rota 2 unimodal rodoviário, o resultado indicou 0,50 MJ.km-1.t-1. Nas participações de energia apresentadas, comparando as rotas 1 e 2, a que apresentou maior gasto energético específico foi a rota 2 (0,50 MJ.km-1.t-1), seguida pela rota 1 (0,34 MJ.km-1.t-1). / The present work objectified to currently analyze the energy flow considering the existing routes for the draining of soy of the region center-west of Brazil, more necessarily, of the city of Rio Verde (GO) until the port of Santos (SP), since, it is a great exporting polar region of solid granaries. Two routes for the analysis had been selected, one contemplating the multimodality, that is, modal the road, together railroad worker and water road, and another one, an only modality, the modal road. The conversion of involved the physical and operational factors in the systems logistic, multimodal and unimodal of studied transports if gave by means of raised energy coefficients next to literature. The gotten results had indicated, for multimodal route 1, with energy expense specific greater the modal road (0,50 MJ.km-1.t-1), followed for modal railroad worker (0,42 MJ.km-1.t-1) e, in third, the modal water road (0,22 MJ.km-1.t-1). For route 2 road unimodal, the result indicated 0,50 MJ.km-1.t-1. In the presented participation of energy, comparing routes 1 and 2, the one that specific energy expense presented greater it was route 2 (0,50 MJ.km-1.t-1), followed for route 1 (0,34 MJ.km-1.t-1).
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Análise energética comparativa na logística de transporte multimodal da soja /Bovolenta, Fábio César, 1971. January 2007 (has links)
Orientador: Marco Antonio Martim Biaggioni / Banca: Osmar de Carvalho Bueno / Banca: Luís Fernando Nicolosi Bravim / Resumo: O presente trabalho objetivou analisar o fluxo energético considerando as rotas atualmente existentes para o escoamento de soja da região centro-oeste do Brasil, mais precisamente, do município de Rio Verde (GO) até o porto de Santos (SP), visto que, é um grande pólo exportador de granéis sólidos. Foram selecionadas duas rotas para a análise, uma contemplando a multimodalidade, ou seja, os modais rodoviário, ferroviário e hidroviário, e outra, uma única modalidade, o modal rodoviário. A conversão dos fatores físicos e operacionais envolvidos nos sistemas logísticos, multimodal e unimodal de transportes estudados se deu por meio de coeficientes energéticos levantados junto à literatura. Os resultados obtidos indicaram, pela rota 1 multimodal, com gasto energético específico maior o modal rodoviário (0,50 MJ.km-1.t-1), seguido pelo modal ferroviário (0,42 MJ.km-1.t-1) e, em terceiro, o modal hidroviário (0,22 MJ.km-1.t-1). Pela rota 2 unimodal rodoviário, o resultado indicou 0,50 MJ.km-1.t-1. Nas participações de energia apresentadas, comparando as rotas 1 e 2, a que apresentou maior gasto energético específico foi a rota 2 (0,50 MJ.km-1.t-1), seguida pela rota 1 (0,34 MJ.km-1.t-1). / Abstract: The present work objectified to currently analyze the energy flow considering the existing routes for the draining of soy of the region center-west of Brazil, more necessarily, of the city of Rio Verde (GO) until the port of Santos (SP), since, it is a great exporting polar region of solid granaries. Two routes for the analysis had been selected, one contemplating the multimodality, that is, modal the road, together railroad worker and water road, and another one, an only modality, the modal road. The conversion of involved the physical and operational factors in the systems logistic, multimodal and unimodal of studied transports if gave by means of raised energy coefficients next to literature. The gotten results had indicated, for multimodal route 1, with energy expense specific greater the modal road (0,50 MJ.km-1.t-1), followed for modal railroad worker (0,42 MJ.km-1.t-1) e, in third, the modal water road (0,22 MJ.km-1.t-1). For route 2 road unimodal, the result indicated 0,50 MJ.km-1.t-1. In the presented participation of energy, comparing routes 1 and 2, the one that specific energy expense presented greater it was route 2 (0,50 MJ.km-1.t-1), followed for route 1 (0,34 MJ.km-1.t-1). / Mestre
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