Haul-by-haul steam trawler catch and effort data for 1918�23, 1937�43 and 1952�57, which covers a large portion of the history of steam trawling in the Australian South East Fishery, were examined in detail for the first time. There were 64,371 haul records in total. The catch-rate for all retained catch combined shows a strong decline overall, with a brief recovery during World War II, probably due to increased retention of previously discarded species. The fishing fleet moved to more distant fishing grounds and deeper waters as the catch-rate declined. The catch-rates of the main commercial species followed a similar pattern in a number of regions within the fishery. The catchrate of the primary target species � tiger flathead (Neoplatycephalus richardsoni) � dropped considerably from the early, very high, catch-rates. Chinaman leatherjacket (Nelusetta ayraudi) and latchet (Pterygotrigla polyommata) � species that were apparently abundant in the early years of the fishery � virtually disappeared from catches in later years. The appearance of greater catches of jackass morwong (Nemadactylus macropterus), redfish (Centroberyx affinis), and shark/skate during the war and afterwards was probably due to increased retention of catches of these species. The disappearance of certain species from the catch may be due to high fishing pressure alone, or to a combination of fishing pressure, changes in the shelf habitat possibly caused by the trawl gear, and environmental fluctuations. Catch-rates in weight per haul per species were standardised to annual indices of abundance using a log-linear model. Standardised annual index trends for flathead, latchet and leatherjacket indicate a strong to severe decline over the period covered by the data. All species showed seasonal patterns, but the peak season varied depending on the species. The distribution of standardised catch-rate by area also differed greatly by species, and no single area showed consistent differences across all species. Day trawls caught more flathead, redfish and latchet, while night trawls caught more morwong and leatherjacket. Moon phase had less influence on catch-rates than the other factors examined. Correlation of annual index trends with a number of annual mean environmental factors was examined and no strong correlations were found. Annual catches of the major commercial trawl species on the SE Australian shelf were estimated from recorded total trawl catches, catch species composition from subsamples and estimates of the rate of discarding. These annual catches, standardised indices of abundance and biological population parameters were used in single-species stock reduction models to estimate absolute biomass trends. Biological population parameters and the biomass estimates were used to calculate management reference point fishing mortality rates F0.1, Fspr30 and Fmsy. Results showed that simple plausible population models can be constructed that account for catches over the long period of time from 1915 to 1961. Simple mass-balance ecosystem models were built for the demersal community of the SE Australian shelf for 1915 and 1961 using the Ecopath software. Model inputs were consistent with a more comprehensive SE marine ecosystem model in development by CSIRO. The models demonstrate that biomass estimates produced by the single species stock reduction models can be consistently integrated into simple plausible massbalance ecosystem models. Modern stock assessments for the main commercial species in this fishery today mostly used data collected since about 1985. Abundance indices and total catch estimates from this study have been used in the most recent assessments for tiger flathead and morwong, allowing construction of the exploitation history for these species spanning almost 100 years. Use of the historical information has increased confidence in the estimates of the modern stock assessments � particularly management reference points, and has allowed us to quantify changes in fish abundance that have simply been documented anecdotally in the past.

Patterns in 0+ fish distribution along longitudinal and depth profiles were studied in five canyon-shaped reservoirs in the Czech Republic. In two canyon-shaped and one shallow well-mixed reservoirs the efficiency of fry trawls was investigated during late summer for juveniles and in one canyon-shaped reservoir the efficiency of ichthyoplankton trawls was investigated during spring for larvae and early juveniles.

Les courants de turbidité dans les canyons sous-marins contribuent largement au transfert sédimentaire à travers des marges continentales. L’étude géologique des canyons sous-marins et des systèmes turbiditiques associés a permis des avancées fondamentales dans la compréhension de l’évolution des courants de turbidité.Ces études sont cependant limitées à des interprétations a posteriori, basées sur la répartition des dépôts et des évidences morphologiques. Cette thèse vise à l’application de la modélisation numérique des courants de turbidité, sur la base des processus physiques, à deux canyons sous-marins de la côte Méditerranée Occidentale.Des courants de turbidité liés au chalutage de fond sont modélisés dans le canyon de La Fonera. Les résultats du modèle permettent de spatialiser ce transport; ainsi le modèle peut être un point de départ pour l’identification de zones de pêche au chalut avec un moindre impact. L’absence d’un plateau continental au niveau de Nice a permis une alimentation continue du système turbiditique du Var indépendamment des variations du niveau marin. Ainsi ce système s’avère un laboratoire naturel pour l’étude du contrôle climatique sur l’activité turbiditique. L’influence des forces de Coriolis dans l’évolution spatiale des courants de turbidité et dans la construction de la Ride sédimentaire du Var est modélisée et mise en évidence pour la première fois.La modélisation numérique des courants de turbidité ne peut pas fournir à présent des résultats de qualité prédictive du fait de la quantité limitée d’information disponible pour établir les conditions initiales de l’écoulement qui impactent largement son évolution et dépôts. Malgré ce fait, la modélisation numérique permet d’élargir les interprétations du fonctionnement sédimentaire des canyons étudiés, d’identifier les chemins empruntés par les écoulements et leur dépôt final et de mieux préparer des cibles (mouillages et carottage) lors des campagnes à la mer. / Turbidity currents in submarine canyons are the main contribution for sediment transfer across the continental margins. Geological studies of submarine canyons and associated turbiditic systems for more than 30 years led to an extraordinary breakthrough in the understanding of how turbidite systems evolve. However, these studies remain limited to a posteriori interpretations, based on the distribution of deposits and morphological evidences. The overarching aim of this thesis is to apply a 2DH process-based model to simulate large-scale turbidity currents on two different submarine canyons in the western Mediterranean coast.The work in La Fonera canyon, in the Catalan margin, focuses on the modelling of sediment transport and accumulation resulting from trawling activities on the canyon flanks. The numerical process-based provides a 3D visualization of potential trawling impacts on sediment dynamics. The study represents a starting point for the assessment of the sedimentary impact of bottom trawling in deep continental margins. The present work can help in the identification of trawling areas with lesser impacts. The Var Sedimentary System, located in the vicinity of Nice (France), is connected to the Var River during both low and high-stands and it can be considered as a natural laboratory for the study of the climatic control on the turbiditic activity. The influence of Coriolis forces on the spatial evolution of the hyperpycnal flows and hence in the construction of the Var Sedimentary Ridge (VSR) is evidenced and supported for the first time.The major drawback is the limited amount of information for the necessary initial and boundary conditions; hence modelling results might not be of predictive quality. However, modelling results provide a full-scale vision of the system allowing the identification of sediment pathways and deposition areas on the basis of physical processes and enlarge the present knowledge of the canyons studied. The results obtained may help in the identification of strategic mooring and coring sites to further advance the state of our knowledge on sediment dynamics of the different cases studies.

Graduation date: 2006 / Structure-forming invertebrates belong to a polyphyletic group of primarily sessile and sedentary megafauna that can significantly enhance the complexity of physical habitats. A number of these organisms, including cold-water corals and sponges, are known to be slow growing and vulnerable to physical disturbance. In addition, as filter feeders, these invertebrates can indicate areas of consistently favorable conditions for feeding and growth. This study provides the first quantitative analysis of structure-forming invertebrate communities in many areas along the continental margin of Oregon and Washington. Geological surveys during 1992-95, using the occupied submersible, Delta, sampled an extensive area in this region, primarily on and around rock outcrops. The videos from these surveys were analyzed to inventory and catalog sessile structure-forming invertebrates and to document their associations with geological habitat types. Detailed data on geological substrate, invertebrate diversity, abundance, and density were compiled and analyzed. It was found that geological substrate and depth were reliable indicators of suitable habitat for most species included in the study. Gorgonian corals tended to concentrate in high densities in depths between 200-250m, at the southern edges of submerged rocky banks, and where hard rocky substrate was covered with a thick layer of sediment. Because of recent fishery regulation changes, this information can be used as baseline data for future studies on the effectiveness of closed areas on the recovery of structure-forming invertebrates from disturbance, particularly bottom trawling.

La pesca d'arrossegament practicada al mar Mediterrani incideix sobre un rang batimètric molt ampli i afecta a nombrosos tipus de fons que presenten comunitats molt diversificades, on les espècies de peixos, crustacis, cefalòpodes, altres mol·luscs, equinoderms i d'altres macroorganismes epibentònics interaccionen entre si. D'aquí la importància de caracteritzar amb una aproximació multiespecífica els fons explotats, com la que aquí hem dut a terme, prenent en consideració no tan sols les espècies d'interès comercial sinó totes les espècies que conformen la comunitat. Els objectius concrets d'aquesta tesi estan centrats en l'estudi qualitatiu i quantitatiu dels descartaments produïts per la pesca d'arrossegament que efectua la flota espanyola en la zona del Golf de Lleó, i en aspectes relacionats a millorar la selectivitat de les xarxes emprades canviant el disseny de la malla tradicional per malla quadrada.El mostreig s'ha dut a terme a bord d'una embarcació d'arrossegament comercial, amb una freqüència setmanal, dins el període comprès entre març del 1998 i març del 2000. En total s'han analitzat 68 pesques. Totes les mostres estudiades provenen del primer vol del dia i s'han capturat a fondàries entre 50 i 500 metres.De tot el volum capturat durant l'estudi s'han identificat un total de 307 espècies pertanyent a diversos grups taxonòmics. El grup taxonòmic majoritari és el dels peixos amb 133 espècies, seguit dels crustacis, els cefalòpodes, els equinoderms i finalment el grup d'altres invertebrats. L'espècie més capturada en nombre a la pesquera del Golf de Lleó ha estat la cervellina (Leptometra phalangium) i les més capturades en biomassa han estat la sardina (Sardina pilchardus) i el lluç mediterrani (Merluccius merluccius smiridus).Pel total de la captura la fracció descartada en nombre d'individus representa el 71% mentre que la biomassa descartada és de l'ordre del 36%. La causa més important en quant a quantitat de rebuig produït és la que respon al compliment de la normativa vigent, ja sigui per les talles mínimes legals o per les captures acompanyants permeses. Els majors descartaments estacionals en termes d'abundància es donen a la primavera i l'estiu, coincidint amb l'època de reclutament de la majoria de les espècies explotades. En canvi, els descartaments estacionals en termes de biomassa són excepcionalment elevats a l'estiu i estan provocats per la captura massiva de sardina (S. pilchardus) durant aquesta època de l'any. El rebuig expressat tant en nombre com en pes disminueix en funció de l'estrat de fondària, essent la quantitat descartada major en l'estrat A (50-200 m) i menor en l'estrat C (>400 m).S'ha comprovat que el disseny de malla quadrada aplicat al cóp de les xarxes d'arrossegament fa augmentar dràsticament, tant en nombre com en pes, el percentatge d'individus escapats, disminuint a la vegada la quantitat de descartament. També s'aconsegueix un augment de la mida de primera captura (L50) de totes les espècies excepte en la bruixa de quatre taques (Lepidorhombus boscii). A més es redueix l'impacte de la pesca sobre els estocs d'individus juvenils, sobretot d'espècies que presenten una secció de cos rodona com el lluç mediterrani (M. merluccius smiridus) i el verat (Scomber scombrus), disminuint així la sobrepesca de creixement i de reclutament al mateix temps que s'assegura i es millora la venda d'exemplars de mida legal. / Multispecies Mediterranean trawl fisheries are carried out in a wide range of depths and affect different bottoms and communities. The demersal resources distributed in the trawl fishing grounds off the south-western Gulf of Lions were studied. The aim of this study is to evaluate qualitatively and quantitatively the amount of discards associated to demersal trawl fisheries in this area and to improve the selectivity of bottom trawl nets introducing square mesh codends. A weekly sampling was conducted with a chartered commercial trawler (length 23 m; 600 HP) between march 1998 to march 2000. All the samples took place during daylight at depths ranging between 50 and 500 m. A total of 68 hauls were analyzed and 307 species were identified. The main taxonomic group are fishes with 133 species followed by crustaceans, cephalopods, echinoderm and other invertebrates. Leptometra phalangium is the most abundant species in number of individuals and Sardina pilchardus and Merluccius merluccius smiridus are the most abundant in biomass.From the total catch discards represented 71% in number of individuals and 36% in biomass. The main reason to discard is the compliance with current legislation in relation to minimum landing size and TAC's.Seasonal discards were important in number of individuals during spring due to recruitment of some commercial species. In summer, large amounts of Sardina pilchardus were discarded due to legal regulations that established TAC's to small pelagic species.Discards decreased with depth. We obtain majors discards in the continental shelf and less in the slope.We realized that square mesh design in codends is better than diamond mesh design. The percentage of individuals and biomass escaped increase in square mesh codends and the fraction discarded decrease. The estimated fifty percent retention length (L50) and selection factors were higher for square mesh codends than diamond mesh codends in the most cases except for Lepidorhombus boscii. Also the L50 obtained with square mesh codends are very close to or coincide with the legal size for the majority of the species studied. This results may be explained by the different body shapes and behaviour of the individuals species. We have observed that square mesh codends contribute to reduce the impact of fisheries in immature and undersized individuals from the stock, especially in species with a round shape body like Merluccius merluccius smiridus and Scomber scombrus. Moreover, the square mesh codends assured that landings are made up of marketable lengths.

L'aquaculture et la pêche impactent l'environnement, les ressources et le fonctionnement des écosystèmes. L’un des enjeux en écologie est de placer ces activités anthropiques dans un cadre de développement durable. Afin de quantifier et de limiter ces impacts, différentes méthodes d’évaluation environnementale ont vu le jour. L’Analyse de Cycle de Vie (ACV) est une méthode pertinente pour évaluer le bilan environnemental d'un produit en prenant en compte l’ensemble de ses étapes de vie, "du berceau à la tombe", depuis l’extraction des matières premières et leurs transformations pour l'élaboration du produit, jusqu’à la fin de vie. Cette thèse porte sur l’adaptation de l’ACV au domaine de l'aquaculture et de la pêche en Tunisie. Son objectif est d'explorer les perspectives offertes par cette méthodologie afin de mieux caractériser le fonctionnement des systèmes de production de poissons et leur lien avec l’environnement. Cette étude a montré que les pratiques aquacoles et la production d'aliment de poisson sont les contributeurs majeurs aux impacts environnementaux, ceci est expliqué par l'utilisation de farine et d'huile de poisson dans la fabrication de l'aliment. Les résultats ont également montré que les impacts du chalutage de fond sont proportionnels à la quantité de carburant nécessaire pour la production. Ce travail a permis d'étudier et comparer les impacts environnementaux de l'activité aquacole et de la pêche au chalutage de fond en Tunisie. Les résultats de cette thèse ont un intérêt pour les gestionnaires en proposant des voies d'amélioration et des recommandations stratégiques de gestion pour améliorer les deux secteurs afin de les placer dans un contexte de développement durable. / The main goal of ecology is to place human activities within a framework of sustainable development by enhancing their economic benefits, their social attractiveness and their environmental performances. Ecosystems that support fisheries and aquaculture are subject to several alterations of significant relevance to their functioning and to their abilities to provide goods and services. Therefore, the long-term sustainability of fishing and aquaculture is a major concern from an environmental and ecological viewpoint. Both activities carry risks of negative environmental impacts because of its close relation with the immediate environment. To better understand environmental impacts and ensure the sustainability of fishing and aquaculture, it is necessary to develop an integrative sciencebased approach to impact assessment. Life Cycle Assessment (LCA) has emerged as a robust method to estimate potential environmental impacts associated with a product. It allows the assessment of environmental impacts “from cradle to grave”, taking into account all stages of a product’s life. This thesis focuses on the adaptation of LCA to demersal trawling and aquaculture in Tunisia. The goal is to explore how LCA improves the environmental evaluation of seafood production systems and how it helps to better understand their links with the environment. Results revealed that rearing practices and fish feed were the greatest contributors to the impacts studied due to the production of fish meal and oil and the low efficiency of feed use. The study also showed that impact intensity of demersal trawling was proportional to the amount of fuel consumed. LCA is a valuable tool for assessing how to improve environmental sustainability of demersal trawling and aquaculture.

L'étude de la variabilité spatio-temporelle des flux sédimentaires sous l'influence des forçages naturels et des activités de chalutage a été entreprise à l'échelle du plateau continental du Golfe de Gascogne, en associant des données in situ et une modélisation numérique 3D déterministe. Deux campagnes en mer spécifiques ont été menées pour quantifier les impacts physiques induits par un chalut professionnel au niveau de la Grande-Vasière, en termes de remise en suspension (panache turbide), et de perturbation de la structure et de la nature du sédiment superficiel. Ces données ont permis d'estimer à 0.13 kg.m-2 le taux d'érosion moyen. Leur croisement avec des données d'effort de pêche a conduit à une cartographie mensuelle du flux d'érosion par chalutage. D'autre part, un modèle hydro-sédimentaire 3D réaliste a été mis en place et calibré à partir de mesures au point fixe. Une attention particulière a été accordée au paramétrage de l'érosion naturelle sous l'influence combinée des vagues et des courants. Une nouvelle formulation de la loi d'érosion adaptée aux mélanges de sable fin et de vase classiquement rencontrés sur les plateaux continentaux a été proposée et a permis d'optimiser significativement la réponse du modèle en termes de turbidité. Deux simulations de 5 ans ont été réalisées en incluant ou non l'influence du chalutage de fond, dans le but de quantifier et comparer les contributions relatives des forçages naturels et anthropique sur les flux verticaux (érosion) et horizontaux (transport solide) de sédiments. La variabilité temporelle des flux est décrite en une succession de régimes caractéristiques répondant à divers forçages (e.g. marée, vent, vagues, chalutage), et les flux résiduels saisonniers et annuels sont commentés : sans tenir compte des apports fluviaux, le flux de matériel vaseux a été estimé à 1.6 Mt/an sortant par le nord (au droit de La Pointe du Raz) et à 0.62 Mt/an vers le talus continental (au niveau de l'isobathe 180 m). / The spatio-temporal variability of sediment fluxes under the influence of natural forcings and trawling activities was assessed at the scale of the Bay of Biscay shelf, from in situ data and a 3D process-based numerical modelling. Two sea trials were carried out to quantify physical impacts induced by a professional trawling gear over an intensively trawled area of the shelf, the "Grande-Vasière", in terms of resuspension (turbid plume) and alteration of the surficial sediment nature and structure. These data enabled to estimate an average trawling-induced erosion rate of 0.13 kg.m-2. Their combination with fishing effort data led to monthly spatial distributions of trawling-induced erosion fluxes.Besides, a 3D realistic hydro-sedimentary model has been set up and calibrated from measurements acquired at a mooring station. The calibration task mainly consisted in assessing the natural erosion law setting under the influence of waves and currents. A new formulation of the erosion law has been proposed to describe the erosion of any mixture of mud and fine sand (sediment facies classically encountered on continental shelves) and led to a noteworthy improvement of the model response in terms of turbidity. Two 5-year simulations were performed accounting for natural forcings only or both natural and anthropogenic forcings in order to quantify and compare their respective contributions to sediment fluxes (vertical and horizontal sediment dynamics). The temporal variability of sediment fluxes is described in a succession of typical regimes occurring in response to various conditions of forcings (e.g. tide, wind, wave, trawling), and residual fluxes are assessed at seasonal and annual scales: without accounting for riverine sediment inputs, the mud flux is estimated to 1.6 Mt/yr outflowing northward (at the latitude of the Pointe du Raz) and to 0.62 Mt/yr toward the continental slope (through the 180 m isobath).