Submarine canyons are important to continental shelf ecosystems. They have a strong influence on shelf circulation and the distribution of biota. The Perth Canyon is a long, deep canyon on the Western Australian coastline that has attracted attention as a feeding area for pygmy blue whales (Balaenoptera musculus brevicauda). Despite existing on a highly oligotrophic coast, the Perth Canyon has the ability to support sufficient krill to feed these massive mammals. The aim of this study was to examine the physical processes within the Perth Canyon, and consider how these could affect productivity. Research areas included the interaction of the Leeuwin Current and Leeuwin Undercurrent with the canyon, the circulation within the canyon, the effect of wind forcing and the occurrence of upwelling. The oceanography of the Western Australian coast including seasonal productivity changes was also examined. This study utilised numerical modelling and collection of field data to develop a thorough understanding of the Perth Canyon. The numerical model ROMS (Regional Ocean Modelling System) was used to simulate a long stretch of coastline in which the Perth Canyon was centrally located. The model forced the Leeuwin Current and Undercurrent using density gradients, and the seasonal Capes Current was then generated by applying a surface wind stress. The simulations showed that primarily the Leeuwin Undercurrent interacted with the canyon. Eddies continually formed within the canyon, which enhanced vertical transport and could contribute to entrapment of passive drifters. The addition of wind had no discernible effect on canyon circulation although vertical velocities increased everywhere and shallow upwelling occurred along the shelf. The field data comprised moored temperature loggers, field cruises, and sundry data from satellite imagery, weather stations and whale observations. / The temperature loggers, located on the canyon rim, indicated the range of processes that affect the canyon region. These processes included seasonal changes in the wind, the seasonal changes and meanders of the Leeuwin Current, storms, the near-diurnal sea breeze and inertial period changes, and other internal waves. The temperature loggers also indicated sporadic upwelling at the canyon rims, although this upwelling rarely extended into the Leeuwin Current. The field cruises gathered CTD, ADCP, nutrients and acoustic backscatter data. The water masses near the canyon were identified from their temperature, salinity and oxygen signatures. The deep chlorophyll maximum exhibited high spatial variability around the canyon. The circulation, in conjunction with the simulated circulation from ROMS, reiterated that eddies filled the canyon below its rims, and suggested that passive drifters would aggregate within the head. The acoustic backscatter reinforced this, showing that biota concentrated near the head of the canyon, which is where the whales were most often sighted feeding. The conclusions of this study were that the canyon is a region of enhanced productivity where upwelling is enhanced and aggregation of passive drifters is likely. Upwelling occurs more strongly when the Leeuwin Current is weakened or has meandered out of a region. Seasonal changes in productivity in the canyon conform to seasonal productivity arguments for the entire coastline, which accounts for the seasonal aggregation of blue whales. The physical processes in the Perth Canyon are variable and all are important to this marine ecosystem.

The development and activity of submarine canyons on continental margins is strongly influenced by temporal and spatial changes in sediment distribution associated with orbitally-forced sea-level cyclicity. On active margins, canyons are also strongly influenced by tectonic processes such as faulting, uplift and earthquakes. Within this framework the role of mass-wasting processes, including sediment failures, bedrock landslides and sediment gravity flows, are to: 1) transport material across the slope; 2) act as intra-slope sediment sources; and 3) shape seafloor morphology. In this project the seafloor-landscape signatures of tectonic and geomorphic processes are analysed to interpret the development of submarine canyon morphology on active margins. Datasets include high-resolution bathymetry data (Simrad EM300), multichannel seismic reflection data (MCS), high-resolution 3.5 kHz seismic reflection data, sediment cores, and dated seafloor samples. High-resolution bathymetric grids are analysed using techniques developed for terrain-roughness analysis in terrestrial landscapes to objectively map and interpret features related to seafloor mass-wasting processes. The Hikurangi subduction margin of New Zealand provides world-class examples of the control of tectonic and sedimentary processes on margin development, hosting multiple examples of deeply-incised canyon systems across a range of scales. Two main study sites, in Poverty Bay and Cook Strait, provide examples of canyon formation. From these examples conceptual and representative models are developed for the spatial and temporal relationships between active tectonic structures, geology, sediment supply, slope- and shelf-incised canyons, slope gully systems, and bedrock mass failures. The Poverty Bay site occurs on the subduction-dominated northern Hikurangi Margin, where the ~3000 km² Poverty re-entrant hosts the large Poverty Canyon system, the only shelf-break-to-subduction-trough canyon on the northern margin. The geomorphic development of the re-entrant is affected by gully development on the upper slope, and multi-cubic-kilometre-scale submarine landslides. From this site the study focuses on the initiation and development of upper-slope gullies and the role of deep-seated slope failure in upper-slope evolution. The Cook Strait site occurs on the southern Hikurangi Margin in the subduction-to-strike-slip transition zone. The 1800 km² Cook Strait Canyon incises almost 50 km into the continental shelf, with a multi-branching canyon head converging to a deeply slope-incised meandering main channel fed by multiple contributing slope canyons. Other medium-sized canyons are incised into the adjacent continental slope. Fluvial sediment supply to the coast is relatively low on the southern margin, but Cook Strait is subject to large diurnal tidal currents that mobilise sediment through the main strait area. Prior to the morphostructural analysis of the Cook Strait and Poverty study sites a revision of the tectonic structure was undertaken. In Cook Strait a revision of the available fault maps was undertaken as part of a wider, related tectonic study of the central New Zealand region. In Poverty Bay very limited prior information was available, and as part of this study the structure and stratigraphy of the entire shelf and upper slope has been interpreted. On active tectonic margins submarine canyons respond to tectonics at: 1) margin-setting scales relating to their ability to become shelf incised; 2) regional scales relating to canyon-incision response to base-level perturbations; and 3) local scales relating to propagating structures affecting canyon location and geometry. Interpretation of the spatial distribution of fluid vent sites, gully development and landslide scars leads to the conclusion that seepage-driven failure is not a primary control on the widespread instances of gully formation and landslide erosion affecting structurally-generated relief across the margin. Rather, the erosion of tectonic ridges is dominated by tectonics by: slope oversteepening; weakening of the rockmass in fault-damage zones; and triggering of slope failure by earthquake-generated cyclic loading. Deep-seated mass failures affect numerous aspects of submarine landscapes and play a major role in the enlargement of canyon systems. They enable the development of slope gully systems and represent a major intra-slope sediment source. Quantitative morphometric analysis together with MCS data indicate that landslides may evolve to be active complexes where landslide debris is remobilized repeatedly, analogous to terrestrial-earthflow processes. This process has not previously been documented on submarine slopes. A model is presented for the evolution of active margin canyons that contrasts highstand and lowstand canyon activity in terms of channel incision, sedimentary processes and slope-erosion processes. During sea-level highstand intervals, canyons become decoupled from their terrestrial/coastal sediment-supply source areas, while during sea-level lowstand intervals, canyons are coupled to fluvial and littoral sediment-supply sources, and top-down (i.e. shelf-to-lower-slope) sediment transport and channel incision is active. Canyon-head areas are incision dominated during the lowstand while mid to lower canyon reaches experience both a transient increase in sediment in storage and canyon-fill degradation and incision into bedrock. Tectonics influences the canyon landscape through both uplift-controlled perturbations to canyon base-levels and earthquake-triggering of mass movement. Following sea-level rise the sediment supply to canyon heads will be switched off at a certain threshold sea level. From this point canyon heads become aggradational. Mid to lower canyon reaches continue to incise due to continuing tectonic uplift and earthquake-triggered slope instability. Knickpoints are propagated up channel and excavate canyon and sub-canyon channels from the bottom up. Thus, while top-down infilling of non-coupled canyons occurs during sea-level highstands, the lower reaches of active margin canyons continue to incise due the influence of tectonic processes.

The development and activity of submarine canyons on continental margins is strongly influenced by temporal and spatial changes in sediment distribution associated with orbitally-forced sea-level cyclicity. On active margins, canyons are also strongly influenced by tectonic processes such as faulting, uplift and earthquakes. Within this framework the role of mass-wasting processes, including sediment failures, bedrock landslides and sediment gravity flows, are to: 1) transport material across the slope; 2) act as intra-slope sediment sources; and 3) shape seafloor morphology. In this project the seafloor-landscape signatures of tectonic and geomorphic processes are analysed to interpret the development of submarine canyon morphology on active margins. Datasets include high-resolution bathymetry data (Simrad EM300), multichannel seismic reflection data (MCS), high-resolution 3.5 kHz seismic reflection data, sediment cores, and dated seafloor samples. High-resolution bathymetric grids are analysed using techniques developed for terrain-roughness analysis in terrestrial landscapes to objectively map and interpret features related to seafloor mass-wasting processes. The Hikurangi subduction margin of New Zealand provides world-class examples of the control of tectonic and sedimentary processes on margin development, hosting multiple examples of deeply-incised canyon systems across a range of scales. Two main study sites, in Poverty Bay and Cook Strait, provide examples of canyon formation. From these examples conceptual and representative models are developed for the spatial and temporal relationships between active tectonic structures, geology, sediment supply, slope- and shelf-incised canyons, slope gully systems, and bedrock mass failures. The Poverty Bay site occurs on the subduction-dominated northern Hikurangi Margin, where the ~3000 km² Poverty re-entrant hosts the large Poverty Canyon system, the only shelf-break-to-subduction-trough canyon on the northern margin. The geomorphic development of the re-entrant is affected by gully development on the upper slope, and multi-cubic-kilometre-scale submarine landslides. From this site the study focuses on the initiation and development of upper-slope gullies and the role of deep-seated slope failure in upper-slope evolution. The Cook Strait site occurs on the southern Hikurangi Margin in the subduction-to-strike-slip transition zone. The 1800 km² Cook Strait Canyon incises almost 50 km into the continental shelf, with a multi-branching canyon head converging to a deeply slope-incised meandering main channel fed by multiple contributing slope canyons. Other medium-sized canyons are incised into the adjacent continental slope. Fluvial sediment supply to the coast is relatively low on the southern margin, but Cook Strait is subject to large diurnal tidal currents that mobilise sediment through the main strait area. Prior to the morphostructural analysis of the Cook Strait and Poverty study sites a revision of the tectonic structure was undertaken. In Cook Strait a revision of the available fault maps was undertaken as part of a wider, related tectonic study of the central New Zealand region. In Poverty Bay very limited prior information was available, and as part of this study the structure and stratigraphy of the entire shelf and upper slope has been interpreted. On active tectonic margins submarine canyons respond to tectonics at: 1) margin-setting scales relating to their ability to become shelf incised; 2) regional scales relating to canyon-incision response to base-level perturbations; and 3) local scales relating to propagating structures affecting canyon location and geometry. Interpretation of the spatial distribution of fluid vent sites, gully development and landslide scars leads to the conclusion that seepage-driven failure is not a primary control on the widespread instances of gully formation and landslide erosion affecting structurally-generated relief across the margin. Rather, the erosion of tectonic ridges is dominated by tectonics by: slope oversteepening; weakening of the rockmass in fault-damage zones; and triggering of slope failure by earthquake-generated cyclic loading. Deep-seated mass failures affect numerous aspects of submarine landscapes and play a major role in the enlargement of canyon systems. They enable the development of slope gully systems and represent a major intra-slope sediment source. Quantitative morphometric analysis together with MCS data indicate that landslides may evolve to be active complexes where landslide debris is remobilized repeatedly, analogous to terrestrial-earthflow processes. This process has not previously been documented on submarine slopes. A model is presented for the evolution of active margin canyons that contrasts highstand and lowstand canyon activity in terms of channel incision, sedimentary processes and slope-erosion processes. During sea-level highstand intervals, canyons become decoupled from their terrestrial/coastal sediment-supply source areas, while during sea-level lowstand intervals, canyons are coupled to fluvial and littoral sediment-supply sources, and top-down (i.e. shelf-to-lower-slope) sediment transport and channel incision is active. Canyon-head areas are incision dominated during the lowstand while mid to lower canyon reaches experience both a transient increase in sediment in storage and canyon-fill degradation and incision into bedrock. Tectonics influences the canyon landscape through both uplift-controlled perturbations to canyon base-levels and earthquake-triggering of mass movement. Following sea-level rise the sediment supply to canyon heads will be switched off at a certain threshold sea level. From this point canyon heads become aggradational. Mid to lower canyon reaches continue to incise due to continuing tectonic uplift and earthquake-triggered slope instability. Knickpoints are propagated up channel and excavate canyon and sub-canyon channels from the bottom up. Thus, while top-down infilling of non-coupled canyons occurs during sea-level highstands, the lower reaches of active margin canyons continue to incise due the influence of tectonic processes.

Water column methane measurements have been used to understand both the global distribution of methane in the oceans and the local flux of methane from geologic sources on the continental margins, including methane vents and gas-hydrate-bearing sites. We have measured methane concentrations in 1607 water samples collected along the central California continental margin. Methane supersaturation of the surface mixed layer (0-50 msbsl) is widespread and above a well-defined subsurface particle maximum (~50 mbsl) that generally corresponds with the pycnocline. Local production of methane appears to be occurring in the surface mixed layer above the particle maximum and may not be particle-associated. Methane concentrations in water column CTD cast profiles and ROV-collected bottom waters obtained in Partington, Hueneme, Santa Monica, and Redondo submarine canyons increase towards the seafloor and are distinctly higher (up to 186 nM) compared to open-slope and shelf waters at similar depths. These values are in excess of measured surface water methane concentrations and could not be generated by mixing with surface water. Elevated methane concentrations in these submarine canyons and persistent mid-water methane anomalies in Ascension and Ano Nuevo Canyons could result from restricted circulation and/or proximity to gas vents, seafloor exposure of methane gas hydrates, recently-eroded methane-rich sediment, submarine discharge of methane-rich groundwater, or particle-associated methane production. On the Santa Barbara shelf water column methane profiles near known gas vents also increase in concentration with increasing depth. Thus, elevated bottom water methane concentrations observed in submarine canyons may not be diagnostic of proximity to methane vents and may be caused by other processes.

Cold-water corals, similar to tropical corals, contain a diverse and complex microbial landscape. Comprised of vital microscopic organisms (i.e. bacteria, viruses, archaea), the coral microbiome is a driving factor in the proliferation and survival of the coral host. Bacteria provide essential biological functions within coral holobionts, facilitating increased nutrient utilization and production of antimicrobial compounds. To date, few cold-water octocoral species have been analyzed to explore the diversity and abundance of their microbial associates. For this study, 23 samples of the family Anthothelidae were collected from Norfolk (n = 12) and Baltimore Canyons (n = 11) from the western Atlantic in August 2012 and May 2013. Genetic testing found that these samples comprised two Anthothela species (Anthothela grandiflora and Anthothela sp.) and a new genus. DNA was extracted and sequenced with primers targeting the V4-V5 variable region of the 16S rRNA gene using 454 pyrosequencing with GS FLX Titanium chemistry. Results demonstrated that the host genus was the primary driver of bacterial composition. The new coral genus, dominated by Alteromonadales and Pirellulales, had much higher species richness and a distinct bacterial community compared to Anthothela samples. Anthothela species had very similar bacterial communities, dominated by Oceanospirillales and Spirochaetes. Core bacterial diversity present across 90% of the Anthothela samples revealed genus-level conservation. This core included unclassified Oceanospirillales, Kiloniellales, Campylobacterales, and Spirochaeta; the functional abilities of which contribute to a nearly complete nitrogen cycle. Dominant bacterial members of the new coral genus also had functional capabilities in nitrogen cycling. Overall, many of the bacterial associates identified in this study have the potential to contribute to the acquisition and cycling of nutrients within the coral holobiont.

Submitted by Caroline Falcao (caroline.rfalcao@ufpe.br) on 2017-06-29T17:44:44Z No. of bitstreams: 2 license_rdf: 811 bytes, checksum: e39d27027a6cc9cb039ad269a5db8e34 (MD5) 2011-Dissertação-VeronicaOliveira.pdf: 1667348 bytes, checksum: 414658d0814de55828e22ff1ca12623b (MD5) / Made available in DSpace on 2017-06-29T17:44:44Z (GMT). No. of bitstreams: 2 license_rdf: 811 bytes, checksum: e39d27027a6cc9cb039ad269a5db8e34 (MD5) 2011-Dissertação-VeronicaOliveira.pdf: 1667348 bytes, checksum: 414658d0814de55828e22ff1ca12623b (MD5) Previous issue date: 2011-02-18 / Esse estudo representa a primeira avaliação da meiofauna em cânions submarinos no Atlântico Sul e, em especial, na Bacia de Campos. A meiofauna dos cânions Almirante Câmara e Grussaí e, em transectos adjacentes, foi analisada em quatro isóbatas (400m, 700m, 1.000m e 1.300m), em duas campanhas (maio/2008 e fevereiro/2009), considerando três estratos sedimentares (0-2cm, 2-5cm e 5-10cm). Para testar a significância da densidade e da riqueza da meiofauna, utilizou-se uma análise de variância fatorial com um “desenho amostral balanceado”, considerando como fatores: áreas, campanhas, isóbatas e estratos. A composição taxonômica da meiofauna, registrada nos cânions e em suas áreas adjacentes, foi semelhante à outros estudos realizados em áreas de mar profundo, sendo composta por 23 táxons, com Nematoda sendo o mais freqüente e abundante. As densidades da meiofauna nos sedimentos dos cânions e nas áreas adjacentes na Bacia de Campos foram altas, sendo aquelas encontradas dentro dos cânions mais elevadas do que nos seus transectos adjacentes correspondentes. As densidades foram, significativamente, maiores no estrato sedimentar superior em relação aos demais, em ambas as campanhas. No presente estudo observou-se que a abundância da meiofauna e a riqueza de grupos não apresentaram variações significativas em função do aumento da profundidade.O teste de correlação não indicou a presença de umarelação entre o carbono orgânico total e a riqueza/abundância da meiofauna. / This study represents the first meiofauna evaluation in submarine canyons from South Atlantic, with emphasis in Campos Basin. The meiofauna from Almirante Câmara and Grussaí canyons and adjacent transects were analyzed in 4 different isobaths (400m, 700m, 1000m and 1300m) during two campaigns (May/2008 and February/2009). Meiofauna core was divided in 0-2cm, 2-5cm and 5-10cm. A balanced four-way analysis of variance was applied in order to evaluate the difference in density and richness; for this analysis area, campaign, isobaths and layers were used as factors. Meiofauna composition from canyons and their adjacent areas were similar to other studies in deep-sea areas being composed of 23 taxa. Nematoda was the most frequent and abundant taxon. Meiofauna density from canyons and adjacent areas was high, but the density from canyons was higher than in their adjacent area in both sampling campaigns. The densities were significantly higher in the upper sedimentary strata in relation to others, in both campaigns. In this study we observed that the abundance and richness of meiofauna groups showed no significant variations as a function of increasing depth. There was no correlation between total organic carbon and meiofauna richness/abundance.

Este estudo constitui parte do Projeto Habitats Heterogeneidade Ambiental da Bacia de Campos coordenado pelo CENPES/Petrobras, um projeto multidisciplinar de caracterização ambiental que considera as diferentes feições e habitats da margem continental do sudeste brasileiro. O objetivo desta tese foi investigar os processos relacionados com a origem, o transporte e o acúmulo de matéria orgânica (MO) em sedimentos da margem continental da Bacia de Campos (RJ). Para isso, foram determinados a composição elementar da matéria orgânica (carbono e nitrogênio) por combustão a seco e os lipídios (esteróis, álcoois e ácidos graxos) por CG-MS e CG-DIC. Foram analisadas 215 amostras de sedimento superficial (0-2 cm de profundidade), coletadas em duas amostragens (períodos seco e chuvoso de 2008/2009), distribuídas sobre 12 isóbatas (de 25 a 3000 m) ao longo de 9 transectos de norte a sul da bacia. Além disto, foram ainda consideradas as isóbatas de 400 a 1900 m em dois cânions submarinos no norte da bacia (Almirante Câmara e Grussaí). Com base nos resultados obtidos, a MO sedimentar na plataforma e talude da bacia revelou-se essencialmente autóctone, derivada de produtores primários e secundários. Com isto, a MO contém uma fração reativa significativa e, portanto, é potencialmente biodisponível para os organismos bentônicos. No entanto, foram observados gradientes espaciais significativos na qualidade e na quantidade da MO sedimentar. Na plataforma continental (25 m a 150 m de profundidade) as concentrações de lipídios foram intermediárias e houve predomínio de MO sedimentar lábil. Exceções foram as áreas influenciadas por ressurgência costeira e/ou intrusão sub-superficial (próximo à Cabo Frio, Cabo de São Tomé e no limite norte da bacia), onde as concentrações foram altas. No talude superior e médio (400 a 1300 m) as concentrações de MO foram notadamente mais elevadas, mas com maior influência de processos bacterianos de alteração de sua composição original. E no talude inferior (1900 a 3000 m) as concentrações de MO estiveram muito baixas e apenas os lipídios mais resistentes à degradação bacteriana foram encontrados em concentrações mensuráveis. Isto sugeriu a exportação de materiais da plataforma ao longo do gradiente batimétrico, possivelmente decorrente da ação de meandros e vórtices da Corrente do Brasil e das correntes de fundo atuantes na região. Além disto, por ser lábil e biodisponível, a MO no sedimento apresenta uma fração biodisponível que pode ter uma influência na ecologia das comunidades bentônicas, particularmente aquelas localizadas no talude superior. Os cânions Grussaí e Almirante Câmara se revelaram regiões de acúmulo de MO e importantes no transporte da MO com valor nutritivo para comunidades bentônicas do talude médio e inferior. / This study is part of the Habitats Project - Campos Basin Environmental Heterogeneity - coordinated by CENPES/PETROBRAS, a multidisciplinary project that considers environmental characterization of the different features and habitats of the Brazilian South-Eastern continental margin. The aim of this thesis was to investigate the processes related to the origin, transport and accumulation of organic matter (OM) in sediments of the continental margin of the Campos Basin (RJ).To this end, the elemental composition of organic matter (carbon and nitrogen) - determined by dry combustion - and lipids (sterols, alcohols and fatty acids) - determined by GCMS and GC-FID - were considered. It was analyzed 215 samples of surface sediment (0-2 cm depth) collected in two samplings (dry and rainy seasons of 2008/2009), distributed over 12 isobaths (25 to 3000 m) along transects distributed from north to south of the basin. Moreover, it was also considered samples from the 400 to 1900 m isobaths in two submarine canyons (Almirante Câmara and Grussaí) in the northern basin. Based on the results, the sedimentary OM continental shelf and slope of Campos Basin was considered to be essentially autochthonous, derived from primary and secondary producers. As a consequence, a significant fraction of OM is reactive and therefore is potentially bioavailable to benthic organisms. However, significant spatial gradients in the quality and quantity of sedimentary OM were observed. In the continental shelf (25 m to 150 m depths), concentrations of lipids were intermediate and there was a predominance of labile sedimentary OM. Exceptions to this general feature were the areas influenced by coastal upwelling and/or sub-surface water intrusion (near Cabo Frio, Cabo de São Tomé and the northern boundary of the basin), where high concentrations of both total organic carbon and lipids were measured. In the upper and middle slope (400 to 1300 m) concentrations of OM were notably higher, but with greater influence of bacterial processes changing their original composition. And in the lower slope (1900 to 3000 m) concentrations of OM were very low and only the lipids more resistant to bacterial degradation were found in measurable concentrations. This suggested the export of materials from the continental shelf along the depth gradient, possibly due to the action of eddies and meanders of the Brazil Current and bottom currents operating in the region. Moreover, for its lability and bioavailability, the OM in the sediment can have a major influence on the ecology of benthic communities, particularly those located on the upper slope. The Almirante Câmara and Grussaí canyons revealed to be regions of OM accumulation and important features on the transport of OM with nutritional value for benthic communities of middle and lower slope.

Este estudo constitui parte do Projeto Habitats Heterogeneidade Ambiental da Bacia de Campos coordenado pelo CENPES/Petrobras, um projeto multidisciplinar de caracterização ambiental que considera as diferentes feições e habitats da margem continental do sudeste brasileiro. O objetivo desta tese foi investigar os processos relacionados com a origem, o transporte e o acúmulo de matéria orgânica (MO) em sedimentos da margem continental da Bacia de Campos (RJ). Para isso, foram determinados a composição elementar da matéria orgânica (carbono e nitrogênio) por combustão a seco e os lipídios (esteróis, álcoois e ácidos graxos) por CG-MS e CG-DIC. Foram analisadas 215 amostras de sedimento superficial (0-2 cm de profundidade), coletadas em duas amostragens (períodos seco e chuvoso de 2008/2009), distribuídas sobre 12 isóbatas (de 25 a 3000 m) ao longo de 9 transectos de norte a sul da bacia. Além disto, foram ainda consideradas as isóbatas de 400 a 1900 m em dois cânions submarinos no norte da bacia (Almirante Câmara e Grussaí). Com base nos resultados obtidos, a MO sedimentar na plataforma e talude da bacia revelou-se essencialmente autóctone, derivada de produtores primários e secundários. Com isto, a MO contém uma fração reativa significativa e, portanto, é potencialmente biodisponível para os organismos bentônicos. No entanto, foram observados gradientes espaciais significativos na qualidade e na quantidade da MO sedimentar. Na plataforma continental (25 m a 150 m de profundidade) as concentrações de lipídios foram intermediárias e houve predomínio de MO sedimentar lábil. Exceções foram as áreas influenciadas por ressurgência costeira e/ou intrusão sub-superficial (próximo à Cabo Frio, Cabo de São Tomé e no limite norte da bacia), onde as concentrações foram altas. No talude superior e médio (400 a 1300 m) as concentrações de MO foram notadamente mais elevadas, mas com maior influência de processos bacterianos de alteração de sua composição original. E no talude inferior (1900 a 3000 m) as concentrações de MO estiveram muito baixas e apenas os lipídios mais resistentes à degradação bacteriana foram encontrados em concentrações mensuráveis. Isto sugeriu a exportação de materiais da plataforma ao longo do gradiente batimétrico, possivelmente decorrente da ação de meandros e vórtices da Corrente do Brasil e das correntes de fundo atuantes na região. Além disto, por ser lábil e biodisponível, a MO no sedimento apresenta uma fração biodisponível que pode ter uma influência na ecologia das comunidades bentônicas, particularmente aquelas localizadas no talude superior. Os cânions Grussaí e Almirante Câmara se revelaram regiões de acúmulo de MO e importantes no transporte da MO com valor nutritivo para comunidades bentônicas do talude médio e inferior. / This study is part of the Habitats Project - Campos Basin Environmental Heterogeneity - coordinated by CENPES/PETROBRAS, a multidisciplinary project that considers environmental characterization of the different features and habitats of the Brazilian South-Eastern continental margin. The aim of this thesis was to investigate the processes related to the origin, transport and accumulation of organic matter (OM) in sediments of the continental margin of the Campos Basin (RJ).To this end, the elemental composition of organic matter (carbon and nitrogen) - determined by dry combustion - and lipids (sterols, alcohols and fatty acids) - determined by GCMS and GC-FID - were considered. It was analyzed 215 samples of surface sediment (0-2 cm depth) collected in two samplings (dry and rainy seasons of 2008/2009), distributed over 12 isobaths (25 to 3000 m) along transects distributed from north to south of the basin. Moreover, it was also considered samples from the 400 to 1900 m isobaths in two submarine canyons (Almirante Câmara and Grussaí) in the northern basin. Based on the results, the sedimentary OM continental shelf and slope of Campos Basin was considered to be essentially autochthonous, derived from primary and secondary producers. As a consequence, a significant fraction of OM is reactive and therefore is potentially bioavailable to benthic organisms. However, significant spatial gradients in the quality and quantity of sedimentary OM were observed. In the continental shelf (25 m to 150 m depths), concentrations of lipids were intermediate and there was a predominance of labile sedimentary OM. Exceptions to this general feature were the areas influenced by coastal upwelling and/or sub-surface water intrusion (near Cabo Frio, Cabo de São Tomé and the northern boundary of the basin), where high concentrations of both total organic carbon and lipids were measured. In the upper and middle slope (400 to 1300 m) concentrations of OM were notably higher, but with greater influence of bacterial processes changing their original composition. And in the lower slope (1900 to 3000 m) concentrations of OM were very low and only the lipids more resistant to bacterial degradation were found in measurable concentrations. This suggested the export of materials from the continental shelf along the depth gradient, possibly due to the action of eddies and meanders of the Brazil Current and bottom currents operating in the region. Moreover, for its lability and bioavailability, the OM in the sediment can have a major influence on the ecology of benthic communities, particularly those located on the upper slope. The Almirante Câmara and Grussaí canyons revealed to be regions of OM accumulation and important features on the transport of OM with nutritional value for benthic communities of middle and lower slope.

Les courants de turbidité dans les canyons sous-marins contribuent largement au transfert sédimentaire à travers des marges continentales. L’étude géologique des canyons sous-marins et des systèmes turbiditiques associés a permis des avancées fondamentales dans la compréhension de l’évolution des courants de turbidité.Ces études sont cependant limitées à des interprétations a posteriori, basées sur la répartition des dépôts et des évidences morphologiques. Cette thèse vise à l’application de la modélisation numérique des courants de turbidité, sur la base des processus physiques, à deux canyons sous-marins de la côte Méditerranée Occidentale.Des courants de turbidité liés au chalutage de fond sont modélisés dans le canyon de La Fonera. Les résultats du modèle permettent de spatialiser ce transport; ainsi le modèle peut être un point de départ pour l’identification de zones de pêche au chalut avec un moindre impact. L’absence d’un plateau continental au niveau de Nice a permis une alimentation continue du système turbiditique du Var indépendamment des variations du niveau marin. Ainsi ce système s’avère un laboratoire naturel pour l’étude du contrôle climatique sur l’activité turbiditique. L’influence des forces de Coriolis dans l’évolution spatiale des courants de turbidité et dans la construction de la Ride sédimentaire du Var est modélisée et mise en évidence pour la première fois.La modélisation numérique des courants de turbidité ne peut pas fournir à présent des résultats de qualité prédictive du fait de la quantité limitée d’information disponible pour établir les conditions initiales de l’écoulement qui impactent largement son évolution et dépôts. Malgré ce fait, la modélisation numérique permet d’élargir les interprétations du fonctionnement sédimentaire des canyons étudiés, d’identifier les chemins empruntés par les écoulements et leur dépôt final et de mieux préparer des cibles (mouillages et carottage) lors des campagnes à la mer. / Turbidity currents in submarine canyons are the main contribution for sediment transfer across the continental margins. Geological studies of submarine canyons and associated turbiditic systems for more than 30 years led to an extraordinary breakthrough in the understanding of how turbidite systems evolve. However, these studies remain limited to a posteriori interpretations, based on the distribution of deposits and morphological evidences. The overarching aim of this thesis is to apply a 2DH process-based model to simulate large-scale turbidity currents on two different submarine canyons in the western Mediterranean coast.The work in La Fonera canyon, in the Catalan margin, focuses on the modelling of sediment transport and accumulation resulting from trawling activities on the canyon flanks. The numerical process-based provides a 3D visualization of potential trawling impacts on sediment dynamics. The study represents a starting point for the assessment of the sedimentary impact of bottom trawling in deep continental margins. The present work can help in the identification of trawling areas with lesser impacts. The Var Sedimentary System, located in the vicinity of Nice (France), is connected to the Var River during both low and high-stands and it can be considered as a natural laboratory for the study of the climatic control on the turbiditic activity. The influence of Coriolis forces on the spatial evolution of the hyperpycnal flows and hence in the construction of the Var Sedimentary Ridge (VSR) is evidenced and supported for the first time.The major drawback is the limited amount of information for the necessary initial and boundary conditions; hence modelling results might not be of predictive quality. However, modelling results provide a full-scale vision of the system allowing the identification of sediment pathways and deposition areas on the basis of physical processes and enlarge the present knowledge of the canyons studied. The results obtained may help in the identification of strategic mooring and coring sites to further advance the state of our knowledge on sediment dynamics of the different cases studies.

Les marges continentales, passives ou actives, sont la principale voie de transfert sédimentaire entre le plateau continental et le bassin océanique profond et les plaines abyssales. Les pentes continentales sont le siège de processus d’érosion/dépôt sous le contrôle de transfert de flux particulaires continentaux chenalisés par des structures érosives, telles que les canyons sous‐marins, puis redistribues à l’ensemble de la marge. Les canyons érodent fortement les pentes continentales et contribuent à l’évolution de leur morphologie au cours du temps. On retrouve cependant des canyons sous‐marins qui ne sont pas en relation avec la présence d’un réseau fluviatile. De ce fait, la formation et l’évolution des canyons sous‐marins sont encore peu comprises. Ce travail de thèse s’intéresse aux processus de formation et d’évolution de six canyons sous-marins sur la Marge Ouest du Bassin Ligure et à dix systèmes de canyons sur la Marge Calabro-Ionienne. Le but de cette étude est de contraindre les principales caractéristiques morphométriques (longueur, largeur, profondeur, inclinaison, sinuosité), morphologique (éléments architecturaux, configuration) des canyons, de caractériser leur évolution amont‐aval et d’analyser leur structure interne, afin de mieux comprendre l’origine des canyons sous‐marins, leurs mécanismes de construction et leur évolution au cours du temps en relation avec le contexte géologique régional et leurs potentiels bassins versants subaérien. Pour cela, une approche basée sur une analyse morpho-bathymétrique et géophysiques a été mise en œuvre à partir de relevés bathymétriques complets des marges, de profils de sismiques, de Chirp et de SAR. / Sediment transfer from the continental shelf to the deep basin is of great interest as it partially controls the morphological and architectural evolution of continental margins. Transfer of particles on the continental slope associates with processes of erosion and deposition that control the construction of typical features such as submarine canyons. Because they strongly erode the continental slope, canyons contribute significantly to its morphological evolution through time. However, a number of studies have evidenced submarine canyons that do not connect with sub‐aerial channelized systems, questioning their processes of formation and evolution. This study aims to better understand the processes of formation and evolution of six submarine canyons identified on the western margin of the Ligurian Basin and ten canyons systems on the Calabro-Ionian margin. From morphometric and structural analyses based respectively on bathymetric, seismic‐reflexion (24‐channel profiles) data, Chirp and SAR profiles we constrained the main morphometric characteristics (length, width, depth, slope gradient, sinuosity index), morphologic (architectural elements and configuration) of canyons, their downward evolution and we analyzed their internal structure in order to better understand their origin, construction mechanisms and evolution in relation with the regional geological context and their potentials subaerial systems.