The phosphoinositide 3-kinases (PI3K/Akt) dependent signaling pathway plays an important role in cardiac function, specifically cardiac contractility. We have reported that sepsis decreases myocardial Akt activation, which correlates with cardiac dysfunction in sepsis. We also reported that preventing sepsis induced changes in myocardial Akt activation ameliorates cardiovascular dysfunction. In this study we investigated the role of PI3K/Akt on cardiomyocyte function by examining the role of PI3K/Akt-dependent signaling on [Ca 2+]i, Ca2+ transients and membrane Ca2+ current, ICa, in cultured murine HL-1 cardiomyocytes. LY294002 (120 μM), a specific PI3K inhibitor, dramatically decreased HL-1 [Ca 2+]i, Ca2+ transients and ICa. We also examined the effect of PI3K isoform specific inhibitors, i.e. α (PI3-kinase α inhibitor 2; 28 nM); ? (TGX-221; 100 nM) and γ (AS-252424; 100 nM), to determine the contribution of specific isoforms to HL-1 [Ca 2+]i regulation. Pharmacologic inhibition of each of the individual PI3K isoforms significantly decreased [Ca2+]i, and inhibited Ca 2+ transients. Triciribine (120 μM), which inhibits AKT downstream of the PI3K pathway, also inhibited [Ca2+]i, and Ca 2+ transients and ICa. We conclude that the PI3K/Akt pathway is required for normal maintenance of [Ca2+]i in HL-1 cardiomyocytes. Thus, myocardial PI3K/Akt-PKB signaling sustains [Ca 2+]i required for excitation-contraction coupling in cardiomyoctyes.

Inherited long-QT syndrome is caused by mutations in HERG gene that are associated with distinct mechanisms of ion channel dysfunction (haploinsufficiency or IKr current suppression). Recently, mutations with a gain of HERG channel dysfunction were reported to cause ventricular fibrillation or short-QT syndrome. In the present work, we performed clinical characterization of arrhythmia patients, genotyping and biochemical analysis of HERG mutants in order to elucidate potential disease mechanisms. Using site-directed mutagenesis, 7 identified mutations were inserted into the WT-HERG cDNA. Western blot was used to analyze mutant HERG glycosylation patterns, immunostaining and confocal laser microscopy was performed to localize mutant proteins in different cell compartments. Heterologous expression in Xenopus oocytes was used to analyze IKr currents with the voltage clamp method. The cellular turnover of mutant HERG channels was assessed with pulse-chase experiments. Mutations in the cytoplasmic domains (PAS and cNBD) and in the voltage sensor are trafficking deficient and were identified in LQT2 patients. Three mutations in the N- and C-terminal linker regions undergo regular trafficking to the plasma membrane and were identified compound heterozygous with one of the other mutations in LQT2 patients or separate in patients with IVF. HERG-mutations are associated with various phenotypes like LQT2 and IVF. It seems that there is a direct correlation between the functionality of the protein region with the clinical and molecular biological phenotype. Mutations in functional regions like the PAS- and cNBD-domain lead to a trafficking defect of the mutant proteins and for that reason to a reduction of Ikr. Mutations in less functional regions like the N and C-terminal linker regions undergo normal trafficking and lead to IVF.

Neuronal nicotinic acetylcholine receptors (nAChRs) are expressed in both the periperhal and central nervous systems, and are involved in pre-, post-, and non-synaptic control of neuronal activation. In the brain, these receptors play an important role in a variety of physiological processes such as cognition, development, learning, and memory formation. Malfunction of these receptors have been implicated in neurodegenerative diseases like Alzheimer's disease (AD), schizophrenia, and Parkinson's disease. To date, 17 different nAChR subunits, including α2-α7 and β2-β4, have been cloned that can form homo- and/or hetero-pentameric ionotropic receptors. The unique combinations of subunit pentamers manifest in distinct functional receptors. Using single-cell real-time quantitative RT-PCR, we identified the individual expression rates and co-expression rates of the different nAChR subunits in rat CA1 hippocampal interneurons in efforts to characterize functional receptors involved in learning and memory. The two-way combination of subunits with highest expression in hippocampal interneurons was α3β2. Moreover, this combination was expressed in ratios near 1:3 or 3:1 α3 to β2 respectively. To investigate the functionality of α3β2 receptors in different stoichiometries, we injected human α3 and rat β2 subunit mRNA in 1:3, 1:1, and 3:1 ratios into Xenopus laevis oocytes for expression. Two-electrode voltage clamp was then performed with the application of different concentrations of ACh to produce full dose-response curves and channel kinetics data. Distinct α3β2 functional channels were identified from the different expression ratios based on significant differences in channel kinetics (i.e.- peak current rise times, peak current decay times, steady state current in forced desensitization) Dose-response curves produced no significant difference in EC50 values in the different expression groups. However, there was a trend to greater agonist sensitivity with increased α3 expression relative to β2. α3β2 receptors were further characterized through forced desensitization of the receptors and generation of IV plots. The findings from this study elucidate the neuronal nAChR subunit combinations that form functional channels in hippocampal interneurons.

A peçonha das anêmonas do mar é uma fonte de compostos bioativos, incluindo toxinas peptídicas que são ferramentas para o estudo da estrutura e função dos canais voltagem dependentes de K+ (KV). Neste trabalho, quatro neurotoxinas foram purificadas da peçonha das anêmonas do mar Actinia bermudenesis e Bunodosoma caissarum. AbeTx1 e BcsTx4 possuem um motivo estrutural semelhante à das \"kappa-toxinas\" e análises funcionais e estruturais permitiram concluir que são os primeiros membros de um novo (tipo 5) de neurotoxinas de anêmonas do mar que atuam em canais KV. Por sua vez, a similaridade estrutural das toxinas BcsTx 1 e BcsTx2 nos permitiu inferir que estas são membros do já descrito tipo 1 (subtipo 1b) de neurotoxinas de anêmona que também atuam em canais KV. A caracterização funcional foi realizada utilizando-se diferentes subtipos de canais KV, expressos em ovócitos de Xenopus laevis e as medidas eletrofisiológicas foram feitas empregando-se a técnica de \"voltage-clamp\" com dois microelétrodos. AbeTx1, BcsTx1 e BcsTx2 (3 μM) apresentaram uma seletividade de atividade para os subtipos de KV1.1-KV1.3, KV1.6 e Shaker IR, ao passo que a BcsTx4 (3 μM) é somente capaz de bloquear a corrente dos subtipos de KV1.1, KV1.2 e KV1.6. Os mecanismos de ação envolvidos na seletividade da atividade e na potência com que estas se ligam aos seus alvos biológicos foram discutidos com base nos resultados obtidos e análises fisiológicas permitiram propor que estas toxinas atuam como \"armas\" para defesa contra predadores e/ou para captura de presas / The sea anemones venom is a rich source of bioactive compounds, including peptide toxins which are tools for studying the structure and function of voltage-dependent channels K+ (KV). In this work, four neurotoxins were purified from the venom of the sea anemones Actinia bermudenesis and Bunodosoma caissarum. AbeTx1 and BcsTx4 have a structural motif similar to that of kappa-toxins and functional and structural analysis showed that they are the first members of a new type (type 5) of sea anemone neurotoxins acting on KV channels. Moreover, the structural analysis of BcsTx1 and BcsTx2 toxins allowed us to conclude that they are members of the previously described type 1 (subtype 1b) of sea anemone neurotoxins. Functional characterization was performed by means of a wide electrophysiological screening on different KV channels using oocytes of Xenopus laevis and electrophysiological measurements were performed employing the voltage-clamp technique. AbeTx1, BcsTx1 and BcsTx2 (μM) showed a selective activity for KV1.1-KV1.3, KV1.6 and Shaker IR, while BcsTx4 (3 μM) only blocks KV1.1, KV1.2 and KV1.6. The mechanisms involved in potency and selectivity were discussed based on the results obtained and physiological analyses have provided new insights on the role of these toxins in the physiology of the sea anemones

Les canaux ioniques sont des complexes macromoléculaires clés exprimés dans tous les types de cellules et sont impliqués dans divers processus physiologiques, y compris la génération et la propagation de potentiels d'action. Des canaux défectueux conduisent à des maladies graves, notamment l'épilepsie, des arythmies et des syndromes douloureux, ce qui en fait une cible potentielle intéressante pour le développement de médicaments. Pour améliorer notre compréhension de ces assemblages biologiques et éventuellement trouver des traitements spécifiques pour les canalopathies, il est crucial d'étudier la structure et la fonction des canaux ioniques. L'objectif principal de cette thèse a été d'étudier ce type de détails structurels et fonctionnels pour trois canaux ioniques associés aux domaines des capteurs de douleur et des canaux potassiques voltage-dépendants en utilisant des techniques de fluorescence et d'électrophysiologie. Dans le premier projet, nous avons étudié la stœchiométrie des canaux hétéromères Kv2.1 / 6.4 (chapitre trois). La technique du décompte de sous-unités isolées (single subunit counting :ssc) permet de compter les sous-unités marquées par fluorescence d’un complexe isolé en déterminant le nombre d'événements de photoblanchiment, qui apparaissent en sauts irréversibles vers le bas sur les traces de fluorescence. Pour désigner la stœchiométrie la plus probable, nous avons utilisé des calculs de probabilités pondérées et avons constaté que les canaux Kv2.1 / 6.4 s'expriment dans un arrangement 2 : 2. Plus précisément, les études fonctionnelles des canaux concatémériques montrent que les sous-unités Kv6.4 et 2.1 doivent être disposées de manière alternée. Le deuxième projet était également basé sur des expériences de SSC et visait à déterminer l'état oligomérique du nouveau canal ionique TACAN (chapitre quatre). Nous avons trouvé une portion significative de canaux intracellulaires, ce qui a provoqué une fluorescence de fond dans les expériences de SSC traditionnelles réalisées avec les cellules mammifères. Pour améliorer le rapport du signal sur bruit de fond, nous avons effectué des expériences de SSC sur des canaux purifiés qui ont été immobilisés sur des lamelles de verre fonctionnalisées Ni-NTA. En utilisant la méthode de calcul décrite dans le premier projet, nous avons trouvé différents états oligomériques et proposons que les canaux TACAN natifs s'assemblent en tétramères qui sont instables lorsqu'ils sont solubilisés dans un détergent. Dans le dernier projet, nous avons étudié la relation structure-fonction de la sous-unité auxiliaire DPP6 pour les canaux Kv4.2 (chapitre cinq). Ici, nous avons progressivement tronqué le grand domaine extracellulaire de 700 acides aminés de DPP6 et étudié son effet sur les courants macroscopiques en utilisant la technique du cut-open voltage clamp. Nous avons constaté que les sous-unités DPP6 avec un domaine extracellulaire court ne parviennent pas à moduler les propriétés du canal aussi efficacement que la DPP6 pleine longueur. Plus précisément, la seconde moitié du domaine extracellulaire b-propeller de DPP6 est responsable d'une inactivation du canal considérablement accélérée. Sur la base de la structure cristalline du domaine extracellulaire, nous avons proposé qu'un domaine b-propeller stable et possiblement la formation de dimères DPP6 sont responsables de la déstabilisation efficace de l'état du canal ouvert. / Ion channels are key macromolecular complexes expressed in all cell types and are involved in various physiological processes including the generation and propagation of action potentials. Defective channels lead to severe diseases including epilepsy, arrhythmias and pain syndromes making them an interesting potential drug target. To improve our understanding of these biological assemblies and eventually find specific treatments for channelopathies, it is crucial to study the structure and function of ion channels. The main purpose of this thesis has been to investigate such structural and functional details of three ion channel complexes from the field of pain sensors and voltage-gated potassium channels using fluorescence and electrophysiological techniques. In the first project, we studied the stoichiometry of heteromeric Kv2.1/6.4 channel complexes (chapter three). Single subunit counting (SSC) allows to directly count the number of fluorescently labeled subunits by determining the number of irreversible, step-wise photobleaching events. To determine the most probable stoichiometry, we used weighted likelihood calculations and found that Kv2.1/6.4 channels express in a 2:2 arrangement. More precisely, functional studies of concatemeric channels (performed by our collaborators) illustrate that Kv6.4 and 2.1 subunits need to be arranged in an alternating fashion. The second project was also based on SSC experiments and aimed at determining the oligomeric state of the novel ion channel TACAN (chapter four). We found a significant amount of channels in the intracellular which caused background fluorescence in traditional SSC experiments performed in cells. To improve the signal to background ratio, we performed SSC experiments on purified channels that were immobilized on Ni-NTA functionalized glass coverslips. Using the model selection method described in the first project, we found different oligomeric states and propose that native TACAN channels assemble as tetramers which are unstable when solubilized in detergent. In the last project, we investigated the structure-function relation of the auxiliary DPP6 subunit in Kv4.2 channel complexes (chapter five). Here, we progressively truncated DPP6’s 700 amino acids long extracellular domain and studied its effect on macroscopic currents using the cut-open voltage clamp technique. We found that DPP6 subunits with a short extracellular domain fail to modulate the channel properties as efficiently as the full length DPP6. More precisely, the second half of the extracellular b-propeller domain of DPP6 is responsible for drastically accelerated channel inactivation. Based on the crystal structure of the extracellular domain, we proposed that a stable b-propeller domain and possibly DPP6 dimer formation is responsible for destabilizing the open channel state efficiently.

Les canaux chlorure sont impliqués dans divers processus indispensables à la vie cellulaire, tel que la stabilisation du potentiel de membrane, la régulation du volume ou du pH, ainsi que dans les transports transépithéliaux de sels. Depuis une douzaine d'années, l'application de la biologie moléculaire à l'étude des canaux chlorure a permis d'identifier plusieurs familles de gènes. La variété fonctionnelle des canaux chlorure peut donc s'expliquer par leur diversité moléculaire. Actuellement, la détermination des rôles physiologiques des canaux chlorure clonés constitue un enjeu majeur de leur étude.<br /><br />Récemment, une stratégie de clonage par homologie nous a permis d'isoler deux nouveaux membres de la famille des ClC, canaux chlorure dépendants du voltage: le xClC-5 et le xClC-3. La caractérisation fonctionnelle et la détermination de la localisation tissulaire et cellulaire de ces protéines a constitué l'objectif de notre étude. Pour cela, l'ovocyte de xénope et la lignée cellulaire HEK 293 ont été utilisés comme systèmes d'expression. L'analyse électrophysiologique, menée par une technique de voltage-clamp en double micro-électrodes, nous a permis de caractériser le xClC-5 du point de vue électrophysiologique et de déterminer sa sensibilité au pH, aux ions métalliques et aux inhibiteurs de tyrosine kinases. L'utilisation d'anticorps nous a permis d'étudier la glycosylation des protéines et d'examiner leur distribution tissulaire et/ou leur localisation cellulaire. Nos résultats sont discutés par rapport à ceux d'autres équipes, en prêtant une attention particulière aux modèles fonctionnels possibles, qui émergent actuellement pour les protéines ClC-5 et ClC-3.

We have developed a novel, sensitive and less time-consuming method to detect activity of the SecA-dependent protein-conducting channels. Nanogram levels of E. coli inverted membrane vesicles were injected into Xenopus oocytes, and ionic currents were recorded using the two-electrode voltage clamp. Currents were observed only in the presence of E. coli SecA in conjunction with E. coli membranes. The observed currents showed outward rectification in the presence of KCl as permeable ions and were significantly enhanced by coinjection with the precursor protein, proOmpA, or active LamB signal peptide. Channel activity was blockable with sodium azide or adenylyl 5’-(β, γ-methylene)-diphosphonate, a non-hydrolyzable ATP analog, both of which are known to inhibit SecA protein activity. Channel activity was also stimulated by oocyte endogenous precursor proteins, which could be inhibited by puromycin. In the presence of puromycin, exogenous proOmpA or LamB signal peptides, but not defective signal peptides, stimulated the ionic currents. We also measured SecA-dependent currents with membranes depleted of SecYEG. Wild-type LamB signal peptides, or precursor proteins stimulated ionic currents following a co-injection of SecYEG¯ membranes with puromycin. Excess exogenous SecA stimulated ionic currents through SecYEG¯ membranes. Similar activities of added SecA were observed with reconstituted membranes depleted of SecYEG. Currents through such SecYEG-depleted membranes were also stimulated by addition of defective LamB signal peptides and unfolded mature PhoA protein. In contrast, currents produced by the membranes containing wild-type SecYEG were not so stimulated, but ionic currents were stimulated through mutant strains, similar to PrlA (SecY) suppressors, e.g. PrlA4, or PrlA665 membranes, suggesting that the proofreading function of SecY was bypassed in these membranes. We have observed that azide can inhibit ionic currents when E. coli wild-type MC4100 membranes were injected with proOmpA or LamB signal peptides into Xenopus oocytes. However, such inhibition was lost when observed with oocyte-endogenous signal peptides in the absence of bacterial signal peptides. Moreover, azide did not show complete inhibition upon using SecYEG¯ membranes or SecYEG¯ reconstituted membranes plus excess SecA in the presence or absence of LamB signal peptides. Such conformational alterations reflect different sensitivity in response to azide during the opening of protein-conducting channels.

Neurotransmitter release at presynaptic terminals is a complex process involving calcium ion influx through voltage-gated calcium channels (CaV). In addition to their role as entry points through which calcium influx may occur, CaV are now understood to be fundamental components of a common release-site complex that is highly adapted for modulation. Consistent with this model, I investigated mechanisms of modulating a presynaptic calcium channel, CaV2.2, via a heterotrimeric G-protein pathway. Using the patch-clamp technique, I demonstrated in chick dorsal root ganglion (DRG) neurons that the slow kinetics of G-protein inhibition of CaV2.2 via GTPgammaS were limited by the rate of GDP dissociation from the G-protein nucleotide binding site. In addition, I investigated the role of G-protein regulation of CaV2.2 currents evoked by action potential-like stimuli. Here, I characterized an inhibited current that was advanced in time with respect to uninhibited controls. These currents exhibited a shorter latency to current activation and faster deactivation. These findings may have important physiological ramifications on signal transduction and timing. In addition to G-protein regulation, presynaptic CaV2.2 have been demonstrated to exhibit a resistance to voltage-dependent inactivation (VDI), a property thought to be important in determining channel availability and synaptic excitability. I demonstrated a role for dynamic palmitoylation in conferring resistance to VDI in presynaptic terminals of the chick ciliary ganglion. Using tunicamycin, an inhibitor of palmitoylation, I induced a hyperpolarizing shift in the steady-state-inactivation (SSI) profile of presynaptic CaV2.2. Finally, I examined the role of a CaV interacting protein, Munc18, as a potential regulator of CaV. I probed for alterations in CaV2.2 function in DRG neurons that had been transfected with Munc18 or Munc18 siRNA. Despite the intimate interaction between Munc18 and CaV2.2, no major effects on the fundamental characteristics of CaV2.2 function were observed. However, a hyperpolarizing shift in the inactivation profile of CaV2.2 was determined in DRG neurons in which Munc18 was knocked down. It is not clear if this was a direct consequence of Munc18 perturbation.

Neurotransmitter release at presynaptic terminals is a complex process involving calcium ion influx through voltage-gated calcium channels (CaV). In addition to their role as entry points through which calcium influx may occur, CaV are now understood to be fundamental components of a common release-site complex that is highly adapted for modulation. Consistent with this model, I investigated mechanisms of modulating a presynaptic calcium channel, CaV2.2, via a heterotrimeric G-protein pathway. Using the patch-clamp technique, I demonstrated in chick dorsal root ganglion (DRG) neurons that the slow kinetics of G-protein inhibition of CaV2.2 via GTPgammaS were limited by the rate of GDP dissociation from the G-protein nucleotide binding site. In addition, I investigated the role of G-protein regulation of CaV2.2 currents evoked by action potential-like stimuli. Here, I characterized an inhibited current that was advanced in time with respect to uninhibited controls. These currents exhibited a shorter latency to current activation and faster deactivation. These findings may have important physiological ramifications on signal transduction and timing. In addition to G-protein regulation, presynaptic CaV2.2 have been demonstrated to exhibit a resistance to voltage-dependent inactivation (VDI), a property thought to be important in determining channel availability and synaptic excitability. I demonstrated a role for dynamic palmitoylation in conferring resistance to VDI in presynaptic terminals of the chick ciliary ganglion. Using tunicamycin, an inhibitor of palmitoylation, I induced a hyperpolarizing shift in the steady-state-inactivation (SSI) profile of presynaptic CaV2.2. Finally, I examined the role of a CaV interacting protein, Munc18, as a potential regulator of CaV. I probed for alterations in CaV2.2 function in DRG neurons that had been transfected with Munc18 or Munc18 siRNA. Despite the intimate interaction between Munc18 and CaV2.2, no major effects on the fundamental characteristics of CaV2.2 function were observed. However, a hyperpolarizing shift in the inactivation profile of CaV2.2 was determined in DRG neurons in which Munc18 was knocked down. It is not clear if this was a direct consequence of Munc18 perturbation.

Two classes of ion-channels comprising 22 members were prepared. Three members were linear oligo-esters with terephthalate core designed to span both leaflets of the bilayer; these were prepared in a modular synthesis in three linear steps. 19 half-channels based on cyclodextrins with functionalized primary-rims were prepared by the Huisgen Cu+-catalyzed [3+2]-cyclization; three distinct synthetic protocols were established to be applicable to these substrates. The voltage-clamp experiment was used to characterize the ion transport properties of these 22 compounds as well as 5 oligo-esters previously prepared by solid-phase synthesis. All but two were active in bilayers, with the majority of these compounds showing highly complex conductance activities. Exponentially voltage-dependent currents were observed for two compounds (both terephthalate-derived); exclusive “square-top” activities were observed for one solid-phase–derived compound and one cyclodextrin-based channels; fractal openings were observed for at least two cyclodextrin-based channels. An “activity grid” notation was proposed as an empirical, coarse, but model-free method of treating the complex data. Through an exhaustive analysis of previously published synthetic ion channels, disparate compounds were found to share modes of activity. Supporting software were developed to facilitate the preparation of activity grids from current traces acquired for the aforementioned 27 compounds. Resulting activity grids for individual experiments were collated to generate an activity profile for each compound, from which a structure–activity map was established and could be compared to the literature data. Four core findings emerged. First, the activity grid notation is sufficiently expressive to denote highly complex mixture of activities. Second, systematic application of the notation reduces selection bias in data analysis. Third, many synthetic ion channels share highly sim- ilar activities and suggests the participation of the lipids, water, and ions in pore-formation. Lastly, the cyclodextrin half-channels are generally membrane active, and their activities are clearly modulated by structural variations. / Graduate