A population survey was conducted on Galago moholi along the road system at Loskop Dam Nature Reserve, Mpumalanga province, South Africa. The data were analyzed using the maximum perpendicular distance, mean perpendicular distance, and maximum reliable perpendicular distance methods. Vegetation sample plots were constructed at the location of each individual sighted in order to analyze the species’ habitat use. The results indicate that the species density of G. moholi is significantly lower at Loskop Dam Nature Reserve than previously reported at other sites within South Africa. G. moholi was found to prefer areas with high concentrations of Dichrostachys sp., Combretum sp., or Acacia sp. One individual was observed consuming vegetative matter, which may indicate that the population within the reserve is utilizing available resources in a different way than populations in other parts of southern Africa. / Department of Anthropology

I here explore the dual roles of gene flow in determining evolutionary and demographic processes in the Misty Lake threespine stickleback (Gasterosteus aculeatus L.). In the Misty watershed, the lake fish have streamlined bodies and numerous gill rakers whereas the inlet stream fish have deeper bodies and reduced number of gill rakers, differences that are adaptive for lake and stream environments respectively. The outlet stream population, however, is morphologically intermediate between the lake and inlet populations as a result of high gene flow from the lake preventing adaptation to the stream environment. First, I quantify the constraining effect of gene flow on adaptive divergence in the Misty outlet using two complementary approaches. By comparing phenotypic values and environmental differences between the three habitats (i.e. lake, inlet and outlet), I estimate that the constraint imposed by gene flow on phenotypic divergence is in the order of 80%, i.e. the outlet population only achieves 20% of the phenotypic divergence expected in the absence of gene flow. Parameterization of a quantitative genetic model confirms this value is possible given a biologically realistic range of parameter values. Second, I demonstrate that this constraint imposed by gene flow on adaptation likely contributes to an observed reduction in abundances along the outlet stream. I do so using a transplant experiment and a three-year selection experiment. Quantification of the amount of dispersal suggests that the negative influence of gene flow offsets the positive demographic influence of the immigration of individuals. In summary, gene flow has profound consequences for both evolutionary and demographic processes taking place in the Misty system.

Thesis (M.S.)--State University of New York at Binghamton, Department of Biological Sciences, 2009. / Includes bibliographical references.

A Bacia do Corumbataí é usada como principal fonte de abastecimento de água para os municípios de Piracicaba e Rio Claro, sendo o Rio Passa-Cinco seu principal tributário. A Bacia do Passa-Cinco pode ser considerada um modelo conveniente para o estudo de conservação de biodiversidade por conter os principais agroecossistemas existentes no estado de São Paulo. Para que sejam estabelecidas estratégias conservacionistas, são necessárias informações de como a biodiversidade é afetada e quais estratégias as populações de espécie silvestres lançam mão para se manter em remanescentes florestais alterados. Pequenos mamíferos tais como roedores e marsupiais, podem ser considerados um bom grupo para ajudar a responder essas questões, pois esse grupo desenvolve um importante papel ecológico em ambientes florestais, através da predação e dispersão de sementes. De agosto de 2003 a janeiro de 2005 foram realizados levantamentos de pequenos mamíferos utilizando 160 armadilhas do tipo Sherman distribuídas em linhas, em 16 sítios amostrais, sendo 4 em cada tipo de ambiente predominante na paisagem: floresta nativa, plantações de Eucalyptus, plantações de cana-de-açúcar e pastagens. Durante esse período, foram capturados 177 indivíduos de roedores e marsupiais distribuídos em oito espécies, com um sucesso de captura de 0.77%. Houve diferença significativa entre os ambientes estudados em termos de abundância, mas não em termos de riqueza de espécies, podendo-se observar uma clara separação entre habitats florestais e não-florestais. Os remanescentes florestais nativos da região, aparentemente, perderam as espécies mais exigentes com relação à qualidade do habitat, de forma que a comunidade atual é formada basicamente de espécies generalistas e características de áreas degradadas. A perda de espécies florestais não somente altera a comunidade de pequenos mamíferos, como favorece o aparecimento de espécies de áreas não-florestais que podem trazer, entre outras coisas, problemas de saúde pública. Ainda assim, a comunidade de pequenos mamíferos da bacia do Rio Passa-Cinco é meritória de esforços conservacionistas, que devem priorizar estudos relacionando o cumprimento das leis ambientais com as alterações que isto possa gerar na comunidade de pequenos mamíferos. / The Corumbataí Basin is used as the main source of water supply for the municipal districts of Piracicaba and Rio Claro, being the Passa-Cinco River its main tributary. The Passa-Cinco river basin can be considered as a convenient model for the study of the conservation of biodiversity for it contains the main existing agroecosystems in the state of São Paulo. So that conservationist strategies can be established, some information is required, such as how biodiversity is affected, and which strategies the population of wild species use to keep themselves in the altered forest remainings. Small mammals, such as rodends and marsupials can be considered a good group to help answer these questions, for this group develops an important ecological role in forest environments, through the predation and dispersion of seeds. From August 2003 to January 2005 surveys on small mammals were carried out using 160 Sherman type traps distributed in lines, in 16 sample country properties, being 4 in each type of environment that is predominant in the landscape: native forest, Eucalyptus plantation, sugar-cane plantation and pastures. In this period, 177 rodend and marsupial individuals were captured, which were distributed in 8 species, with a 0,77% rate of success in capture. There was significative difference among the studied environments in terms of abundance, but not in terms of the richness of the species. Also, we could observe a clear distinction between forest and non-forest habitats. Apparently, the native forest remainings in the region lost their species which are the most demanding in relation to the quality of habitat, in such a way that the current community is basically formed of generalists, which are a characteristic of degraded areas. The loss of forest species not only alters the community of small mammals, but also favors the occurrence of species from non-forest areas which can bring, among other things, problems related to public health. Eventhough, the small mammal community from the Passa-Cinco river basin is worth conservationist efforts which must give priority to studies relating the environmental law enforcement to the changes this might generate to the community of small mammals.

Foi feita uma revisão bibliográfia sobre a aplicação da amostragem seqüencial em manejos de pragas. A metodologia para o desenvolvimento de planos de amostragem seqüencial, foi baseada na teoria de Wald. Verificou-se que a distribuição binomial ajustou-se aos dados de presença-ausência da cochonilha-branca Aulacaspis tubercularis na cultura da manga, obtidos em duas propriedades localizadas na região de Jaboticabal, interior do estado de São Paulo. Seis planos de amostragem seqüencial foram elaborados para o monitoramento dessa praga, três com níveis de erros iguais a 0; 20 e outros três com níveis de erros iguais a 0; 10. Dentre esses, foram elaborados: dois planos para a amostragem em ramos durante o período vegetativo, dois para a amostragem em ramos durante o período de frutificação e outros dois planos para a amostragem em frutos. Nos planos de amostragem seqüencial para ramos no período vegetativo foram utilizados níveis de segurança iguais a 0; 35 e níveis de dano econômico iguais a 0; 50. Já no período de frutificação, houve um rigor maior quanto ao uso desses níveis, devido à presença de frutos. Foram utilizados níveis de segurança iguais a 0; 20 para ramos e 0; 05 para frutos, e níveis de dano econômico iguais a 0; 30 e 0; 15 para ramos e frutos, respectivamente. Foram construídas tabelas para o processo de amostragem em campo, facilitando assim, o trabalho do amostrador. Com o uso dessas tabelas o produtor poderá decidir rapidamente se há, ou não, a necessidade de se realizar o controle dessa praga. / A bibliographical revision on the application of the sequential sampling in management of pests was made. The methodology for the development of plans of sequential sampling, was based on the theory of Wald. It was verified that the binomial distribution adjusted to data of presence-absence of the mango scale Aulacaspis tubercularis on mango crop, gotten in two properties located at the region of Jaboticabal, interior of the state of São Paulo. Six plans of sequential sampling was elaborated for the monitoring of this pest, three with errors levels equal to 0; 20 and others three with errors levels equals to 0; 10. Amongst these, they was elaborated: two plans for the sampling in branches during the vegetative period, two for the sampling in branches during the period of fructification and others two plans for the sampling in fruits. In the plans of sequential sampling for branches in the vegetative period security level equal to 0; 35 and economic damage level equal to 0; 50 had been used. Already in longer period of fructification, had a bigger severity how much to the use of these levels, due to presence of fruits. Security levels equals to 0; 20 for branches and 0; 05 for fruits, and economic damage levels equals to 0; 30 and 0; 15 for branches and fruits, respectively, had been used. Tables for the sampling process in field, thus facilitating, the sampler's work was constructed. With the use of these tables the producer will be able to decide quickly has itself, or not, the necessity of if carrying through the control from this pest.

This study presents an investigation into the population dynamics and social structure of a small, closed elephant population. Specifically, it examined population growth rates for evidence of density-dependent regulation. It also quantified the association patterns of female elephants groups, and male elephants groups. Social structure was examined using Hamilton’s kinship theories of inclusive fitness, and age. Male-female patterns of association were also examined for inbreeding avoidance behaviours. The study population was located in Addo Elephant National Park, South Africa. Density-dependence was assessed using a long-term data set. Densities were considerably higher than estimated carrying capacities. Population growth rate was positively correlated with increasing density. No relationship between birth rate, the age of first calving or calf sex ratio and elephant density was detected but there was a positive relationship between birth rate and rainfall during conception year. Mortality rates, particularly for juveniles, were low, and mean inter-calf interval was 3.3 years. There is no evidence of density dependent regulation in this population. These findings indicate that density dependence should not be considered as an option in the control of elephant numbers in this Park, or where elephant resources are not seasonally limited. Examination of association patterns of the adult female component revealed that associations were not random at the population, family or individual scale. This is the second study on African elephants to confirm previous behavioural studies that predicted that preferred associates were close maternal relatives. This supports many studies showing that social species preferentially associate with their kin. The adult males in this population were found to have a well differentiated society with non-random associations. Generally, males were found to have weak associations with most other males and strong associations with only a few males. This association pattern was found to be persistent over the time frame of the study, as indicated by the time lag analysis. Males returned to their natal family, even when maternally related females were in oestrus. Oestrous females directed positive behaviours towards musth males. It appears that behavioural inbreeding avoidance mechanisms in this small, closed population are inhibited: musth status seems to override inbreeding avoidance. General principles from this case study were interpreted in terms of their applicability to other small, closed populations.

No description available.

Habitat loss and fragmentation is a crisis affecting wildlife worldwide. In Tanzania, East Africa, a dramatic and recent (<80 years) expansion in human settlement and agriculture threatens to reduce gene flow among protected areas for many species of large mammals. Wildlife linkages can mitigate population isolation, but linkage designs lacking empirical justification may be controversial and ineffective. Connectivity conservation requires an understanding of how biogeographic factors shaped gene flow prior to habitat loss or fragmentation, however the history of interaction among populations is rarely known. The goal of my study was to provide context for connectivity conservation in central and southern Tanzania by identifying landscape features that have shaped gene flow for three ungulate species with different dispersal capabilities. I investigated historical patterns of connectivity for Maasai giraffe (Giraffa camelopardalis tippelskirchi), impala (Aepyceros melampus), and eland (Tragelaphus oryx) by estimating genetic structure among four to eight protected areas per species. Genetic structure changes very slowly among large populations and thus is likely to reflect historical processes instead of recent anthropogenic influences. I collected noninvasive DNA samples and generated microsatellite genotypes at 8 to 15 loci per species, then estimated genetic diversity metrics (allelic richness, AR, and expected heterozygosity, H[subscript E]) for each population (defined by reserve). I also calculated genetic distance (F[subscript ST] and Nei's unbiased genetic distance, D[subscript hat]) and an estimate of gene flow (Nm) between all population pairs for each species. To elucidate the possible causes of genetic structure between these populations, I tested for isolation by distance and isolation by resistance based on a suite of biogeographic factors hypothesized to affect gene flow. To do this, I created GIS-based resistance surfaces that assigned different costs of movement to landscape features. I created one or more resistance surfaces for each hypothesis of landscape effect. I used circuit theory to estimate the cumulative resistance between each pair of reserves for each weighting scheme, and then performed Mantel tests to calculate the correlation between these resistances and the observed population pairwise genetic distances (D[subscript hat]). I chose the optimal resistance model for each species as the model that was most highly correlated with observed genetic patterns. To verify that the correlation of resistance models with genetic distance was not an artefact of geographic distance, I performed partial Mantel tests to calculate correlation while controlling for the effect of geographic distance. Finally, I compared historical gene flow patterns to the distribution of contemporary human activity to predict areas that are at risk of a loss of connectivity. Indices of genetic diversity were moderate for all three species and comparable to previously reported values for other savannah ungulates. Diversity (both H[subscript E] and A[subscript R]) was highest in eland and lowest in giraffe for these populations, and was not consistently correlated with reserve size as has been reported for other species in East Africa. Although patterns in genetic distance were broadly similar across all three species there were also striking differences in connectivity, highlighting the importance of cross-species comparisons in connectivity conservation. At this scale, resistance models based on slope strongly predicted population structure for all three species; distance to water was also highly correlated with genetic distance in eland. For all three species, the greatest genetic distances occurred between populations separated by the Eastern Arc Mountains, suggesting that the topography of this area has long acted as a barrier to gene flow, but this effect is present in varying degrees for each species. I observed high levels of historical gene flow between centrally located populations (Ruaha National Park and Rungwa Game Reserve) and those in the southwest (Katavi National Park and Rukwa Game Reserve). Although human settlement in this area has been low relative to other areas, the connection between the Katavi/Rukwa and Ruaha ecosystems may be threatened by increased human activity and warrants conservation. High levels of historical gene flow were also seen between reserves in the northeast (Tarangire National Park, Swagaswaga Game Reserve) and the central and southwest populations. These connections appear highly threatened due to current land use practices, and may have already suffered a loss of gene flow. Field surveys in the lands surrounding the northeastern reserves are needed to quantify current levels of connectivity and determine whether corridors could be established to maintain or restore gene flow with other reserves. / Graduation date: 2012

Doctorat en Sciences / info:eu-repo/semantics/nonPublished

It has been assumed that the considerable dispersal ability of many marine species would prevent genetic divergence in the absence of geographic isolation. However, recent work has shown that many marine species often develop differentiation among areas within their known dispersal range. This 'paradox' of marine divergence is particularly important among marine mammal species where behavior can restrict gene flow. To investigate genetic substructure within such a species, I used tissue samples collected from 63 stranded Pacific harbor seals (Phoca vitulina richardsi) in Washington and Oregon between 2006 and 2010 for population stock analysis. DNA was extracted from frozen tissues, and a 551 bp fragment of mtDNA control region sequence and eight microsatellite loci were amplified to investigate localized genetic structure. Minimum spanning network and haplotype frequency analyses of mtDNA sequences indicated that while haplotype lineages are not isolated within a sampling region, there is some evidence of regional differentiation. On the other hand, microsatellite data suggest a lack of substructure among the animals sampled, with only a weak signal of limited gene flow between Puget Sound and coastal areas. Biased dispersal among age classes was also suggested, with juveniles showing less differentiation among areas than adults. Regardless of the historical scenario which has led to this complex pattern of genetic structure in Pacific harbor seals across the Pacific Northwest, my results suggest higher levels of exchange among areas than previously suspected, and will have important consequences for future management considerations for these stocks.