Submitted by Jean Medeiros (jeanletras@uepb.edu.br) on 2016-08-19T14:06:23Z No. of bitstreams: 1 PDF - Rayssa Soares da Silva.pdf: 6993577 bytes, checksum: 4b28a1b3bf1dccef7a141f2729ec2180 (MD5) / Made available in DSpace on 2016-08-19T14:06:23Z (GMT). No. of bitstreams: 1 PDF - Rayssa Soares da Silva.pdf: 6993577 bytes, checksum: 4b28a1b3bf1dccef7a141f2729ec2180 (MD5) Previous issue date: 2016-02-04 / Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPES / Seagrass beds are essential habitats for the high biodiversity in coastal environments. They provide nursery, feeding and shelter areas for many organisms. Despite its importance, the seagrass beds are among the most threatened coastal ecosystems on the planet and its influence on fish populations has been little studied in Brazil. The understanding of its influence on the dynamics of fish assemblages associated with these environments and the study of the feeding habits of the species that use them supports the development of new conservation policies of these habitats. Thus, the aim of this study was to compare the composition, structure and feeding ecology of fish assemblages found in vegetated and unvegetated areas on the estuary of the Mamanguape River, Paraiba - Brazil, observing the variations in hydrological conditions between the dry and rainy periods. The values of abundance and biomass were higher in non-vegetated areas, although there was no significant difference in species diversity between study areas. Thus, the environmental stability of unvegetated areas proved to be an important factor in determining the biomass and richness patterns. In addition, it was observed that these areas are used by the species at different stages of their ontogenetic development according to the ratio of optimal foraging and the possibility of refuge from predation. Among the species captured in vegetated and unvegetated áreas on the estuary, the four most representative were selected for analysis of stomach contentes, according to their abundance. Of these, three were considered generalists and showed a high degree of individual specialization, supporting the hypothesis of niche variation proposed by Van Valen. Also, we observed the importance of intraspecific competition and the availability of food items in the intraindividual variation in the diet of the species. / Os bancos de fanerógamas marinhas são habitats essenciais para a elevada biodiversidade em ambientes costeiros, pois constituem áreas de berçário, alimentação e refúgio para diversos organismos. Apesar de sua importância, os bancos de fanerógamas estão entre os ecossistemas costeiros mais ameaçados do planeta e sua influência sobre a ictiofauna foi pouco estudada no Brasil. O entendimento da sua influência sobre a dinâmica das assembleias de peixes associados a estes ambientes e o estudo dos hábitos alimentares das espécies que os utilizam auxilia no desenvolvimento de novas políticas de conservação destes habitats. Deste modo, o objetivo deste estudo foi comparar a composição, estrutura e ecologia alimentar de assembleias de peixes encontradas em áreas vegetadas e não vegetadas do estuário do Rio Mamanguape, Paraíba – Brasil, observando as variações do regime hidrológico entre os períodos seco e chuvoso. Os valores de abundância e de biomassa foram maiores nas áreas não vegetadas, apesar de não haver diferença significativa da diversidade de espécies entre áreas estudadas. Deste modo, a estabilidade ambiental das áreas não vegetadas mostrou -se como fator importante na determinação dos padrões de biomassa e riqueza de espécies. Além disso, foi observado que essas áreas são utilizadas pelas espécies em diferentes fases do seu desenvolvimento ontogenético de acordo com a razão entre o forrageamento ótimo e a possibilidade de refúgio contra a predação. Dentre as espécies capturadas nas áreas vegetadas e não vegetadas do estuário do rio Mamanguape as mais representativas foram selecionadas, de acordo com sua abundância, para análise do conteúdo estomacal. Das quatro espécies, três delas foram consideradas generalistas e apresentaram um alto grau de especialização individual, corroborando com a hipótese da variação de nicho proposta por Van Valen. Além disso, observou-se a importância da competição intraespecífica e da disponibilidade de itens alimentares na variação intraindividual da dieta das espécies.

The numerous benefits that wetlands provide make them essential to ecosystem services and ecological functions. Historically, wetland losses have been caused by natural and anthropogenic changes. In Texas, nearly 50% of coastal wetland habitat has been lost since the 1930s and losses in the Lower Neches watershed have been some of the most extensive. Restoration is a way to mitigate these losses and can be accomplished in many ways. Each restoration design creates different aquatic habitats that can influence both submerged aquatic vegetation (SAV) and faunal communities. The restoration of the Lower Neches Wildlife Management Area (LNWMA) has created the conditions for the growth of the invasive submerged macrophyte, Myriophyllum spicatum (Eurasian watermilfoil) which may be competing with the native aquatic grass, Ruppia maritima (widgeongrass) for essential nutrients. In this study, an attempt was made to link restoration design with both SAV and aquatic fauna community structures by using a throw trap to characterize assemblages observed in three different types of restored marshes. We also performed two controlled mesocosm experiments in 0.5 gal aquariums to determine growth inhibition by M. spicatum on R. maritima. Analyses using Kruskal-Wallis non-parametric test determined that temporal variations in fauna and SAV community composition was greater than any restoration effect. Discriminant Function Analyses (DFAs) determined two to three key faunal species that best predicted association among restoration designs, but linear regressions could not determine any consistent relationship between individual species density and biomass of the dominant SAV species, M. spicatum. For the mesocosm experiments, M. spicatum inhibited the biomass production and branch count of R. maritima when the two species are grown together (ANOVA, p = 0.004 and 0.003, respectively). Changes in SAV assemblages due to competition and habitat characteristics could play a major role in determining faunal community. In order to minimize the temporal effect observed and better determine any habitat pattern that may be present, a much longer study is necessary.

The role of mangroves as essential fish habitat has been a focus of extensive research. However, recent evidence has shown that this role should not be evaluated in isolation from surrounding habitats such as seagrass beds and hard-bottom communities. For example, submerged aquatic vegetation (SAV) communities provide potential sources of food and shelter for fish species that may reside in the mangroves, but may also undergo ontogenetic migrations and daily home-range movements into neighboring habitats. The connectivity between the mangrove fish community and the surrounding seascape may be influenced by the level of patchiness, fragmentation, and spatial heterogeneity of adjacent SAV habitats (i.e., SAV seascape structure). The spatial patterns and heterogeneity of SAV seascape structures are driven by internal and external regulatory mechanisms operating at different spatial and temporal scales. In addition, it is likely that many fish species inhabiting the mangrove zones have different home ranges, and foraging and migratory patterns; therefore, different mangrove fish species may respond to seascape heterogeneity at different scales. There are few studies that have assessed the influence and connectivity of benthic habitats adjacent to mangroves for estuarine fish populations at multiple scales. The present research used an exploratory seascape approach in Biscayne Bay (Florida, USA) to evaluate patterns in the patch composition and configuration of SAV communities, and to examine relationships between seascape structural metrics and the abundance, diversity, and distribution of fishes that utilize the adjacent mangrove shoreline as nursery and/or adult habitat. This seascape approach consisted of: a) the multi-scale characterization of the SAV distribution across the seascape with metrics developed in Landscape Ecology, Geographic Information Systems and Remote Sensing; b) multivariate analyses to identify groups with significantly distinct SAV seascape structures within the most heterogeneous scale, and identify possible mechanisms driving the observed SAV seascape structures; and c) an assessment of the mangrove fish community responses to SAV seascape structures. By applying a set of multivariate analyses (e.g., ANOSIM, MDS plots, hierarchical clustering), the buffer within 200 m from shore was identified as the scale with the highest structural heterogeneity. At this scale, two major SAV seascape structures (i.e., areas with similar SAV spatial arrangement and composition) were identified: a fragmented SAV seascape (FSS) structure and a continuous SAV seascape (CSS) structure. Areas with CSS were characterized by large, uniform SAV patches. In contrast, areas with FSS were characterized by a higher density of smaller, more complex SAV patches. Furthermore, the areas with CSS and FSS structures clustered in zones of the bay with distinct salinity properties. The areas with CSS structures were mostly located in zones characterized by high and stable salinity. However, the areas with FSS concentrated in zones that are influenced by freshwater discharges from canals and with low and variable salinity. The responses of fish diversity metrics were not constrained to the scale at which the greatest spatial heterogeneity of SAV seascape structures was observed (i.e., the seascape composition and configuration within 200 m from shore), but was related to SAV seascape characteristics across different scales. The majority of the variability of the fish diversity metrics in the mangrove shoreline was explained by SAV seascape structures within the smaller scales (i.e., 100-400 m from shore), and SAV seascape structures that represented the level of fragmentation and/or the percent of suitable habitat. Different conceptual models were proposed to illustrate and understand the ecological dynamics behind the relationship between the diversity of the mangrove fish community and the structure of the adjacent SAV seascape. In general, the diversity and abundance of fishes is influenced by the type and level of fragmentation of the SAV seascape, which, in turn, influence the proportion of the seascape used for foraging and refuge by fish. In conclusion, this research quantified how the release of large pulses of freshwater into near-shore habitats of coastal lagoons can influence the seascape structure of SAV communities. Namely, freshwater inputs produce fragmentation in otherwise fairly homogeneous SAV meadows. The outcome of this research highlights the importance of seascape characteristics as indicators of ecosystem-level modifications and alterations affecting the spatial distribution, assemblage, and diversity of marine nearshore habitats in coastal regions heavily influenced by human activities. In addition, the results illustrated the cascading effects and synergistic influences of near-shore habitat spatial assemblages on the composition and diversity of estuarine fish communities. Lastly, and very importantly, the relationships established in this project provide quantitative and qualitative information on patterns of species-habitat associations needed for the improved synergistic management and protection of coastal habitats and fisheries resources.

Un des enjeux importants de l’écologie est de comprendre comment les pratiques anthropiques affectent la biodiversité et quelles en sont les conséquences sur le fonctionnement des écosystèmes. L’objectif de cette thèse est d’améliorer la compréhension des mécanismes régissant les communautés végétales aquatiques, et plus particulièrement ceux liés aux perturbations anthropiques et aux phénomènes d’eutrophisation. Les méta-écosystèmes constitués de réseaux d’étangs agro-piscicoles sont des modèles d’étude adaptés à notre problématique car ils sont sous forte pression anthropique et présentent une forte variabilité environnementale. Dans un premier temps, nous avons étudié l’impact des modes de gestion des bassins versants sur l’eutrophisation des étangs. Dans un second temps, nous avons mesuré l’effet de l’eutrophisation sur la productivité et la diversité des communautés phytoplanctoniques. Enfin, nous avons relié 3 types de contraintes générées par les pratiques anthropiques (l’eutrophisation, l’assèchement et la connectivité entre les étangs) sur les communautés de plantes aquatiques en termes de diversité spécifique et fonctionnelle. L’effet de l’eutrophisation, le recrutement et l'établissement des communautés des plantes aquatiques a été abordé au travers de la relation entre la banque de graines et la végétation établie. L’eutrophisation est le facteur majeur responsable de la diminution de la biodiversité végétale dans les étangs. Cependant les perturbations récurrentes constituées par les assecs, engendrent une succession cyclique qui contribue à maintenir une forte biodiversité dans les étangs. / One important issue of research in Ecology is to understand how anthropogenic activities are influencing biodiversity and what are the consequences on ecosystem functioning. The aim of the study is to improve the knowledge of the mechanisms governing aquatic plant communities, particularly those related to human disturbance and eutrophication. Meta-ecosystems constituted by networks of fish-farming shallow lakes are study models adapted to our problematic because they are submitted to a strong anthropogenic pressure and because they show a high environmental variability. First, we studied the impact of watershed management practices on shallow lakes eutrophication. In a second step, we measured eutrophication effect on productivity and on diversity of phytoplankton communities. Finally, we were able to link 3 types of constraints generated by human practices (eutrophication, drying and connectivity between shallow lakes) to aquatic plant communities in terms of specific and functional diversity. The impact of eutrophication, recruitment and establishment of aquatic plant communities has been approached through the relationship between the seed bank and established vegetation. Eutrophication is the major factor responsible for the loss of plant biodiversity in shallow lakes. However frequent disturbances due to drying events induce a cyclic succession that helps maintain a high biodiversity.

L'objectif de cette thèse a été de mesurer comment les modifications des régimes hydrologiques, plus particulièrement les exondations, régissent 1) certains aspects du fonctionnement des zones humides, 2) l'organisation et la dynamique à court terme des communautés végétales aquatiques et 3) la survie et la réponse plastique des végétaux aquatiques. Cette thèse aborde les questions à des échelles spatio-temporelles différentes. Premièrement, à l'échelle de la décennie, j'ai mesuré la conséquence de la baisse de la hauteur d'eau des zones humides péri-fluviales sur leur physico-chimie. Deuxièmement, à l'échelle de la saison, j'ai mesuré l'influence des caractéristiques sédimentaires des zones humides sur la réponse à court terme des communautés végétales à l'exondation. Enfin, à l'échelle de quelques semaines, je me suis intéressée à l'aptitude des espèces d'angiospermes aquatiques à mettre en place un ajustement plastique face à l'exondation, en conditions expérimentales de laboratoire et in situ, j'ai recherché les déterminismes de cette réponse (écologiques, morphologiques, phylogénétiques). En termes de caractéristiques physico-chimiques des eaux de surface, l'étude sur 15 ans de la dynamique de zones humides péri-fluviales subissant des exondations, ne conclue pas, comme cela est habituellement décrit dans la littérature, à une augmentation de la teneur en nutriments de la masse d'eau, mais plutôt des changements suggérant des variations du fonctionnement hydrogéologique des zones humides, en faveur d'une plus grande influence de la nappe de versant dans leur alimentation. La réponse in situ des communautés végétales à l'exondation diffère selon le type de sédiment. La résistance et la résilience des communautés décroissent toutes deux avec la capacité de rétention d'eau du sédiment. La capacité des plantes aquatiques à tolérer l'exondation, en conditions expérimentales, semble différer selon leur position phylogénétique, mais pas selon leur forme de croissance (rosettes ou caulescentes) / The objective of this thesis was to measure how changes in hydrological regimes, particularly dewatering govern 1) aspects of the functioning of wetlands, 2) the organization and short-term dynamics of aquatic plant communities and 3 ) survival and plastic response of aquatic plants. This thesis addresses issues at different spatial and temporal scales. First, at the decade scale, I measured the effect of water-level decreases in riverine wetlands on their physico-chemistry characteristics. Second, at the season scale, I measured the influence of sedimentary characteristics of wetlands on short-term response of plant communities to dewatering. Finally, at the scale of a few weeks, I was interested in the ability of aquatic angiosperm species to develop a plastic adjustment to dewatering, in experimental laboratory conditions and in situ, and I looked determinism of this response (ecological, morphological, phylogenetic). In terms of physico-chemical characteristics of surface waters, the 15- year study of the dynamics of riverine wetlands undergoing dewatering, not reached, as is usually described in the literature, with an increase of water body nutrient contents, but rather changes suggesting variations of the hydrogeological functioning of wetlands in favor of a greater influence of the hillslope groundwater table in their water supply. In situ response of plant communities to dewatering differs according to sediment type. Both, resistance and resilience of communities decrease with the sediment water retention capacity. The ability of aquatic plants to tolerate dewatering, in experimental conditions, seems to differ according to their phylogenetic position, but not according to their growth form (rosettes or caulescentes). Species tolerating dewatering show phenotypic adjustments such as denser aerial organs and high plasticity of the leaves, which may explain the maintenance of a similar growth rate in terrestrial and aquatic conditions in these species

No description available.

Coastal zones are governed by physical forces originating from tidal currents, waves, winds and night convection, amongst others, and are characterized by the presence of canopy meadows. This thesis studies the hydrodynamic in a fluid dominated by: nearly isotropic turbulence, progressive waves and breaking waves in different canopy models. Under nearly isotropic turbulence sheltering is enhanced by a reduction in the plant-to-plant distance. Under progressive waves sheltering is associated with the reduction of wave velocity at the top of submerged rigid canopy. Sheltering observed in the submerged flexible model is caused by blade movement which absorbes the energy. Emergent rigid vegetation shows sheltering. On the other hand, for some specific progressive wave conditions and plant densities and under a fluid dominated by breaking waves, turbulence increases within the meadow if Reynolds number, based on wave velocity, is larger than 300 / Les zones costeres estan governades per forces físiques originades per la marea, l’onatge, i la convecció nocturna, entre d’altres, i caracteritzades per la presència de plantes aquàtiques. Aquesta tesi té per objectiu estudiar la hidrodinàmica d’un fluid dominat per: turbulència quasi-isotròpica, onades progressives i onades trencants en diferents models de vegetació. En un fluid dominat per turbulència isotròpica, la reducció de la turbulència augmenta al reduir la distància entre plantes. En un fluid dominat per onades progressives, la disminució de la turbulència està associada a la reducció de la velocitat d’onada al cim de la vegetació. Aquesta reducció s’observa en plantes submergides flexibles degut a que el moviment de les plantes absorbeix l’energia. La vegetació emergent també redueix la turbulència. Per condicions específiques d’onades progressives i densitat de plantes i sota un fluid dominat per onades trencants, la turbulència incrementa si el número de Reynolds és més gran que 300

Dans les systèmes lotiques, la végétation aquatique se développe en formant des taches générées par des rétroactions échelle-dépendantes. Les plantes modifient l'environnement physique (i.e. organismes ingénieurs), induisant des rétroactions positives dans les taches et négatives à côté, ce qui conduit à la formation de patrons réguliers. Ces rétroactions échelle-dépendantes ne permettent d'expliquer que l'expansion latérale des taches, mais pas leur développement longitudinal. L'objectif était d'étudier les processus qui induisent des rétroactions pour les plantes et les conséquences pour la dynamique des taches. Des mesures de l'hydrodynamique, des caractéristiques des sédiments et de la morphologie des plantes ont été faites in situ le long de taches de longueur croissante. Les résultats ont démontré qu'une longueur minimale est nécessaire pour induire une réduction de la vitesse du courant et une accumulation de sédiments fins dans les taches. L’ensemble conduit à des changements des concentrations en nutriments dans l'eau interstitielle au delà d’une certaine longueur de tache, consistant en une accumulation d'ammonium et une diminution des nitrates. La hauteur des plantes est liée à la longueur de la tache selon un modèle quadratique, suggérant l’existence d’une rétroaction négative au delà d’une longueur seuil, probablement due à la concentration élevée en ammonium qui peut être toxique pour les plantes. Les longueurs au delà desquelles ont lieu des changements des processus biogéochimiques et des rétroactions négatives sont plus faibles dans l’écosystème avec le niveau de nutriments le plus élevé. Enfin, les modifications de l'habitat induites par les taches dépendent des caractéristiques des plantes et des taches. Ces modifications induites par les plantes ont des effets en cascade sur les processus biogéochimiques et la croissance des plantes, avec des conséquences pour la dynamique des taches et le fonctionnement de l'écosystème / Submerged aquatic vegetation often grows in lotic systems in patches generated by scale-dependent feedbacks. As ecosystem engineers, plants modify the physical environment triggering positive feedbacks within the patch and negative feedbacks alongside the patch, resulting in regular pattern formation. These scale-dependent feedbacks enable to explain only the lateral expansion of patches, but not their longitudinal development. The objective was to study the processes that trigger positive and negative feedbacks for plants along patches and the consequences for patch dynamics. In situ coupled measurements of hydrodynamics, sediment characteristics, and plant morphology were performed along patches of increasing length. The results demonstrated that a minimum patch length was needed to induce in-patch velocity reduction and fine sediment accumulation. As a consequence of these modifications, patch length influenced the nutrient concentrations in interstitial water of the in-patch sediment, this effect being observed only over a certain threshold length. Over this threshold length, the sediment presented an accumulation of ammonium and depletion of nitrates. Plant height was related to patch length by a quadratic relationship, suggesting that negative feedbacks occur over a certain patch length, probably due to the high ammonium concentration that can be toxic for plants in the range measured. The threshold lengths over which patches influence the biogeochemical processes and negative feedbacks occur were reduced in the ecosystem presenting the highest nutrient level. The results also demonstrated that the physical habitat modifications induced by patches depend on the plant traits and patch characteristics. The plant-induced modifications of the physical habitat have cascading effects on the biogeochemical processes and plant growth, which depended on the environmental conditions, with consequences for patch dynamics and ecosystem functioning

La végétation aquatique submergée (VAS) est une composante essentielle qui structure les écosystèmes aquatiques continentaux. Elle soutient plusieurs fonctions et services écosystémiques, dont le soutien d’habitats pour la faune, la stabilisation du rivage, le maintien d’une eau claire et la régulation des cycles des nutriments. Cependant, la VAS est soumise aux activités humaines qui modifient leur habitat, altère leur quantité et menacent le maintien de ces services. L’objectif de cette thèse est de mieux comprendre comment les quantités de la VAS répond aux variations environnementales et quels sont les effets de ces modifications sur les fonctions et services qu’elle soutient. Cet objectif est abordé de différents angles d’attaque et à différentes échelles spatiales et temporelles. Tout d’abord, une nouvelle méthode permettant des économies de temps et d’argent pour mesurer la biomasse de la VAS est proposée. À l’aide de deux modèles de calibration, la méthode combine trois techniques existantes couramment utilisées pour estimer la biomasse de la VAS : le prélèvement de biomasse dans des quadrats en plongée, le prélèvement à l’aide d’un râteau manié depuis la surface et l’échosondage à partir d’une embarcation. Cette approche offre l’avantage de limiter l’utilisation risquée et fastidieuse du quadrat avec plongeur, mais fournissant la mesure de biomasse la plus fiable. La première calibration avec le quadrat permet d’utiliser le râteau et corrige son biais, alors que la deuxième calibration entre râteau et échosondage convertit les valeurs mesurées par cette dernière en biomasse. L’utilisation de l’échosondage permet ainsi d’estimer plus rapidement la biomasse à grande échelle. La méthode est validée à partir de données d’échosondage qui sont confrontées avec des biomasses par quadrat, démontrant la robustesse de l’approche. Ensuite, les variations climatiques interannuelles et leurs effets sur la rétention de l’azote ont été évalués pendant six étés dans un herbier aquatique à la confluence de deux tributaires agricoles avec le fleuve Saint-Laurent. Des budgets d’azote journalier ont été estimés par la différence entre les concentrations modélisées de nitrate dans les tributaires et les concentrations sortantes de l’herbier mesurées par une sonde à haute fréquence. La rétention totale a été partitionnée en assimilation autotrophe et en dénitrification à partir de la variation diurne en nitrate. Les budgets ont été confrontés à un indice de biomasse de VAS, la pente de la surface du niveau de l’eau, qui a révélé un portrait détaillé de l’évolution de la biomasse au cours de la saison de croissance. Les résultats montrent que la rétention est influencée par les variations de niveau de l’eau, de température, de biomasse de la VAS et d’apports en nitrate. De hauts taux de consommation de nitrate sont rapportés, parmi les plus élevés mesurés en rivière, avec une biomasse accrue de plantes accrue favorisant l’élimination permanente par la dénitrification. Enfin, une synthèse sur les tendances, les facteurs globaux déterminant les quantité de VAS dans les lacs ainsi que comment les quantité y ont été mesurées est présentée. La compilation a été effectuée à l’aide d’une recherche par mot clés réalisée sur une base de données bibliographiques. La synthèse montre un portrait dynamique dans le temps et dans l’espace des quantités de VAS. Bien que les déclins de quantités soient prédominants, plusieurs séries temporelles récentes indiquent une récupération de la VAS, patrons qui varient selon les régions et les activités humaines. Les usages dans les bassins versants liés à l’eutrophisation sont associés aux déclins, particulièrement en Asie, alors que les augmentations sont surtout associées à la gestion de la VAS en Europe. Les tendances plus variables en Amérique du Nord sont associées à l’arrivée d’espèces envahissantes. Cette thèse innove en fournissant une nouvelle méthode qui facilite la mesure de la biomasse de la VAS à grande échelle. Elle contribue également aux connaissances sur la VAS et le cycle de l’azote en grande rivière en caractérisant la variation de la rétention de nitrate et en soulignant leur important rôle comme site de transformation dans ces écosystèmes. Finalement, elle contribue à la biogéographie de la VAS continentale dans les lacs, indique des lacunes de connaissance, souligne les développements méthodologiques souhaitables et informe sur l’influence de facteurs expliquant la variation de la VAS qui seront utiles pour sa gestion future. Ces informations seront profitables au maintien des fonctions et services soutenus par la VAS et à son utilisation comme une solution fournie par la nature face aux changements globaux. / Submerged aquatic vegetation (SAV) is an essential component that structures inland waters. SAV sustains numerous ecosystem services and functions, such as providing habitat for fauna, stabilizing shoreline, maintaining clear water and regulating nutrient cycles. However, SAV is submitted to human activities that modify their habitat, alter their quantities and threaten the ecosystem services they may provide. The objective of this thesis is to better understand how SAV quantities responds to environmental variations, and what are the effect of these modifications on the functions and services they sustain. This objective is approached in different ways and at various spatial and temporal scales. First, a new cost-effective method to measure SAV biomass is proposed. The method combines three existing techniques by means of two calibration models. This approach has the advantage of reducing the hazardous and cumbersome use of quadrats with divers, whilst providing the most accurate biomass measure. The first calibration with the quadrat allows for the application of the rake and corrects for its bias, while the second calibration between rake and echosounding converts the values measured by the latter into biomass. The use of echosounding thus allows for the estimation of biomass more rapidly at larger scale. The method is validated from echosounding data that are compared to quadrat biomasses, demonstrating the robustness of the approach. Second, interannual climate variation and their effect on nitrogen retention were evaluated during six summers in a SAV meadow at the confluence zone of two agricultural tributaries with the Saint Lawrence River. Daily nitrogen budgets were estimated as the difference between modelled nitrate concentration in the tributaries and concentration outflowing the SAV meadow measured with a high frequency sensor. Total retention was partitioned into autotrophic assimilation and denitrification from the diel nitrate variation. The budgets were compared to an indicator of SAV biomass, the slope of water level surface, which provided a detailed portrait of biomass changes throughout the growing season. The results show that retention is influenced by variation in water levels, temperature, SAV biomass and nitrate inputs. Among the highest nitrate uptake rates are reported compared to previous measurements in inland waters, with plant biomass favoring permanent removal through denitrification. Third, a synthesis on trends and drivers of SAV quantities in lakes, as well as on how it was measured is presented. The compilation was conducted from a keyword search on a bibliographic database. The synthesis shows a dynamic depiction in space and time of SAV quantities. Although decreasing quantities are predominant, many recent time series indicate SAV recovery, and these patterns vary with regions and human activities. Direct activities in watersheds leading to eutrophication are associated with decreases, particularly in Asia, while increases are more associated with SAV management in Europe. Trends are more variable in North America due to invasive species. This thesis innovates by providing a new method facilitating SAV biomass measurement at large scale. The thesis also contributes to knowledge on SAV and on nitrogen cycling in large rivers by characterizing the variation in nitrate retention. Finally, the thesis contributes to inland SAV biogeography, identifies knowledge gaps, indicates desirable methodological developments and informs on drivers of SAV that could inform its future management. This information will be beneficial for the preservation of the ecosystem services and functions provided by SAV and its use as a nature-based solution against global changes.