Introdução: A anemia aplástica (AA) adquirida é uma doença grave, caracterizada por pancitopenia e medula óssea hipocelular sem que haja associação com aumento de reticulina ou infiltração anormal na medula. Embora o mecanismo fisiopatológico não esteja totalmente elucidado, atribui-se a uma resposta imunomediada dos linfócitos T no ambiente medular. A trombopoetina (codificada pelo gene THPO) é um hormônio glicoproteico produzido pelo fígado e responsável pelo estímulo de crescimento de megacariócitos, desenvolvimento plaquetário e de demais linhagens e, quando disfuncional, contribui para o desenvolvimento da AA adquirida. Objetivos: Investigar a presença de variantes genéticas no THPO em amostras de sangue periférico e medula óssea de pacientes com AA adquirida (grupo caso) e de indivíduos saudáveis (grupo controle) e verificar a presença de alterações no número de plaquetas durante o seguimento dos pacientes com AA adquirida. Métodos: O gene THPO foi sequenciado em amostras de DNA de medula óssea de 92 pacientes com AA adquirida e no DNA de sangue periférico de 92 controles, cujas amostras haviam sido previamente armazenado no Laboratório de Hematologia da Faculdade de Medicina de Ribeirão Preto da Universidade de São Paulo (FMRP-USP). O sequenciamento foi realizado pelo método de Sanger. Realizou-se também a associação entre a presença (ou ausência) de variantes em THPO e o número de plaquetas em 83 pacientes utilizando o teste ANOVA Para outras análises estatísticas, foram utilizados os testes t e qui-quadrado com nível de significância de 5%. Resultados: Foram encontrados três polimorfismos de nucleotídeo único (SNPs) nos pacientes com AA adquirida (rs956732, rs6141 e rs3804618). Os mesmos três SNPs foram observados nos indivíduos do grupo controle (p>0,05). Não houve associação entre o número de plaquetas e a presença de SNPs nos pacientes (p>0,05). Conclusões: Três SNPs foram encontrados em frequências alélicas semelhantes tanto no grupo de pacientes quanto nos controles, sugerindo que a trombopoetina não apresenta alterações genéticas que possam ser associadas à fisiopatologia da AA adquirida nessa coorte. / Introduction: Acquired aplastic anemia (AA) is a severe illness, characterized by pancytopenia and hypocellular bone marrow without increased reticulin or abnormal infiltration of the bone marrow. Although the physiopathological mechanism has not been completely understood, an immune-mediated T-lymphocyte response has been attributed to the bone marrow environment. Thrombopoietin (encoded by THPO), a glycoprotein hormone produced by the liver and responsible for stimulating the growth of megakaryocytes, development of platelets and other lineages that when dysfunctional, contributes to the progress of acquired AA. Objectives: To screen the THPO gene for genetic variants in bone marrow of acquired AA patients and in the peripheral blood of controls, and to verify the correlation between the THPO status and platelet counts in the patients during the treatment. Method: Sanger sequencing of the THPO gene was carried out in 92 acquired AA patients (case group) and 92 controls, in DNA samples previously stored in the Hematology Laboratory of the Ribeirão Preto School of Medicine at the University of São Paulo. The association between the THPO status and the platelet counts was performed in 83 patients through the ANOVA test. The Chi-squared test and t-test were also applied for statistical analysis with a 5% significance level. Results: Three single nucleotide polymorphisms (SNPs) were found in the AA patients (rs956732, rs6141, and rs3804618), as well as in the healthy subjects (p>0,05). No association was verified between the platelet counts and the presence of SNPs in the AA patients (p>0,05). Conclusion: Three SNPs were found in both groups, suggesting that thrombopoietin does not harbor genetic variants that could be etiological for the acquired AA in our cohort.

La protéine p53 est surtout étudiée pour sa capacité à empêcher la prolifération de cellules dont le génome est endommagé. Toutefois, en analysant les souris p53Δ31/Δ31 qui expriment une protéine p53 hyperactive, notre laboratoire a découvert un rôle inattendu de p53 dans la régulation du métabolisme des télomères. Ces souris modélisent la dyskératose congénitale (DC), un syndrome d’insuffisance médullaire héréditaire (SIMH) causé par un dysfonctionnement télomérique. Mon projet de thèse a combiné les analyses de modèles murins et de lignées cellulaires humaines afin d’approfondir l'étude de cette nouvelle fonction de p53 et de mieux comprendre le rôle de la voie p53 dans le développement des SIMH.En poursuivant notre analyse du modèle murin p53Δ31, nous avons montré que les cellules p53Δ31/Δ31 présentent une diminution d’expression de 12 gènes mutés dans l’anémie de Fanconi (AF), un autre SIMH étroitement lié à la DC. De plus, ces cellules montrent une capacité réduite à réparer les ponts inter-brins de l’ADN, une caractéristique typique de l’AF. Notre étude suggère que l’activation soutenue de p53 pourrait ainsi contribuer aux similitudes cliniques entre ces deux syndromes. Par ailleurs, nous avons identifié par quel mécanisme p53 régule négativement le métabolisme des télomères et la voie Fanconi de réparation de l’ADN. Ce mécanisme de régulation indirect, via p21 et E2F4, est très conservé entre la souris et l’Homme. De fait, les cellules p53Δ31/Δ31 constituent un outil puissant pour identifier de nouvelles cibles de p53 réprimées par ce mécanisme. Ainsi, elles nous ont permis de montrer que deux gènes essentiels pour la structure des centromères sont réprimés par p53.L’activation de p53 est clairement impliquée dans les étapes ultimes d’une insuffisance médullaire, mais le rôle d’une suractivation de p53 dans l’initiation d’un SIMH chez l'Homme reste, à ce jour, controversé. En effet, une mutation inactivatrice de la ribonucléase PARN a été trouvée chez des patients atteints de DC. Il a été proposé que cette protéine déstabilise l’ARNm de p53 tout en favorisant la maturation de l’ARN de la télomérase, si bien que les conséquences d’une inactivation de PARN restent mal comprises. Au cours de ma thèse, j'ai également étudié de nouveaux modèles murins et établi des modèles cellulaires humains pour déterminer l’implication d’une activation de p53 dans l’initiation d’un SIMH chez l’homme. Les résultats en cours, particulièrement prometteurs, devraient notamment déterminer l’impact d’une déficience en Parn sur la voie de régulation de p53.En conclusion, nous avons montré qu’une activation soutenue de p53 conduit à des phénotypes principalement associés aux SIMH. Par ailleurs, nous avons montré que p53 réprime de nombreux gènes impliqués dans la maintenance du génome, ce qui peut sembler surprenant au regard du concept de « gardien du génome » communément attribué à p53, et nous a amené à rediscuter ce concept. Ainsi, les résultats obtenus pendant ma thèse devraient permettre de mieux comprendre les mécanismes impliqués dans l’insuffisance médullaire, la suppression tumorale et le vieillissement. / The p53 protein is mostly studied for its capacity to prevent the proliferation of cells with damaged genome. However, while studying p53Δ31/Δ31 mice that express a hyperactive p53 protein, our laboratory uncovered an unexpected role of p53 in the regulation of telomere metabolism. These mice model dyskeratosis congenita (DC), an inherited bone marrow failure syndrome (IBMFS) caused by defects in telomere maintenance. My PhD project combined analyses of mouse models and human cell lines to extend the study of this new function for p53 and to understand the role of the p53 pathway in the development of IBMFS.By extending our analysis of the p53Δ31 mouse model, we revealed that the p53Δ31/Δ31 cells exhibit decreased expression levels for 12 genes mutated in Fanconi anemia (FA), another IBMFS closely related to DC. Furthermore, these cells display a reduced capacity to repair DNA inter-strand crosslinks, a typical feature of FA cells. Our study suggests that a sustained activation of p53 might actually contribute to the clinical overlap between both syndromes. Importantly, we identified the mechanism used by p53 to downregulate telomere metabolism and the FA DNA repair pathway. This regulatory mechanism is indirect, via p21 and E2F4, and largely conserved between mice and humans. In fact, the p53Δ31/Δ31 cells constitute a powerful tool to find p53 target genes downregulated through this regulatory pathway. Accordingly, they were useful to show that two genes essential for centromere structure are also downregulated by p53.p53 activation is clearly involved in the final stages of bone marrow failure, but to-date, the role of p53 hyperactivation in the initiation of IBMFS remains controversial. Indeed, an inactivating mutation of the PARN gene, encoding a ribonuclease, was found in patients with DC. This protein was proposed to destabilize the p53 mRNA while promoting the maturation of the telomerase RNA, so that the consequences of PARN inactivation remain poorly understood. During my thesis, I also studied new mouse models and established human cellular models to determine the contribution of p53 activation in initiating IBMFS in humans. The current results, which are particularly promising, should notably determine the impact of Parn deficiency on the p53 regulatory pathway.In conclusion, we demonstrated that a sustained activation of p53 leads to phenotypes mainly associated with IBMFS. In addition, we showed that p53 suppresses many genes involved in genome maintenance, which may seem surprising in view of the concept of "guardian of the genome" commonly attributed to p53, leading us to revisit this concept. Hence, the results obtained during my thesis should help to better understand the mechanisms involved in bone marrow failure, tumor suppression and aging.

Abstract Childhood acute lymphoblastic leukemia (ALL) is the most common cancer in children. The overall survival rate has reached to 90%. However, ALL still presents a significant disease burden and is a major cause for deaths in children. Recently, both inherited germline variants related to ALL susceptibility and somatic genetic variants forming novel subgroups of ALL have been discovered. In this thesis two families with familial ALL were studied. Constitutional heterozygous microdeletion at chromosome 7p12.1p13, including IKZF1, was discovered in the first family with intellectual impairment, overgrowth, and susceptibility to childhood ALL. In the second family, constitutional chromosome translocation was revealed in two individuals with childhood ALL and, subsequently, in seven unaffected family members. The balanced reciprocal translocation t(12;14)(p13.2;q23.1) resulted in breakpoints on two genes; ETV6 on chromosome 12 and RTN1 on chromosome 14. Only a few familial and sporadic ALL cases with germline variants in either IKZF1 or ETV6 have been published, thus supporting the significant role of these constitutional variants in childhood ALL predisposition. Inherited bone marrow failure syndromes (IBMFS) may predispose to childhood leukemia, including ALL. Two unrelated patients were diagnosed with bone marrow failure without the symptoms of classical IBMFS. Neither patient had any signs of developmental delay or congenital anomalies. Exome sequencing revealed identical c.1457del(p.(Ile486fs)) mutation on the ERCC6L2 gene in both patients. A few patients with IBMFS and ERCC6L2 variants have been described in previous studies. Some of them also had congenital craniofacial anomalies and developmental delay that were not detected in the patients in this thesis. The ALL cohort study on genetic variation of mitochondrial DNA (mtDNA) included 36 children. Metabolic change where malignant cells uncouple energy production from oxidative phosphorylation (OXPHOS) is one of the established hallmarks of cancer. In the cohort in this study, 22% of patients harbored nonsynonymous variants on mtDNA in the protein-coding genes of OXPHOS enzyme complexes. The somatic non-neutral variants were found in patients with a poor prognosis cytogenetic marker. The results support the hypothesis that cancer cells harbor mtDNA variants that may affect the cell metabolism. / Tiivistelmä Akuutti lymfoblastileukemia (ALL) on lasten yleisin syöpä. Vaikka nykyisin noin 90 prosenttia paranee, ALL aiheuttaa huomattavan paljon sairastavuutta ja on merkittävä lasten kuolinsyy. Vastikään on löydetty perinnöllisiä geneettisiä muutoksia, jotka altistavat lapsuusiän ALL:lle. Tutkimuksen kohteena oli kaksi perhettä, joissa vähintään kaksi lasta on sairastunut ALL:aan. Ensimmäisessä perheessä havaittiin lapsuusiän ALL:aan sairastuneilla kehityshäiriöisillä sisaruksilla äidiltä periytyvä heterotsygoottinen deleetio kromosomissa 7p12.1p13, jossa sijaitsee IKZF1-geeni. Toisessa perheessä perinnöllinen kahden kromosomin translokaatio todettiin kahdella lapsuusiän ALL:aan sairastuneella sekä seitsemällä perheenjäsenellä. Balansoitu translokaatio t(12;14)(p13.2;q23.1) aiheuttaa katkaisukohdan ETV6-geeniin kromosomissa 12 ja RTN1-geeniin kromosomissa 14. Tähän mennessä on julkaistu vain muutamia tutkimuksia potilaista, joilla on ollut perinnöllinen muutos joko IKZF1- tai ETV6-geenissä. Näillä geeneillä oletetaan olevan tärkeä merkitys perinnöllisessä alttiudessa sairastua lapsuusiän ALL:aan. Perinnölliset luuytimen toimintahäiriöt voivat altistaa leukemialle, kuten ALL:lle. Kahdella lapsella todettiin luuytimen toimintahäiriö, mutta ei muita oireita, jotka voisivat liittyä tyypillisiin perinnöllisiin luuytimen toimintahäiriöihin. Eksomisekvensoinnissa todettiin identtinen, homotsygoottinen mutaatio c.1457del(p.(Ile486fs)) ERCC6L2-geenissä. Kirjallisuuslähteiden mukaan vain muutamalla potilaalla on todettu ERCC6L2-geenin muutoksesta johtuva luuytimen toimintahäiriö. Osalla heistä on ollut synnynnäisiä kallon ja kasvojen anomalioita sekä kehityshäiriö, jollaisia tähän tutkimukseen osallistuneilla potilailla ei todettu. Potilaskohorttitutkimuksessa tutkittiin mitokondriaalisen DNA:n (mtDNA) muutoksia ALL:aan sairastuneilla lapsilla. Syöpäsolut eivät hyödynnä mitokondrion elektroninsiirtoketjua energian tuotantoon, ja tämä aineenvaihdunnan muutos on tunnustettu syövän ominaisuus. Tutkimuksessa havaittiin, että 22 prosentilla potilaista ilmeni diagnoosivaiheessa poikkeavia mtDNA:n muutoksia, jotka olivat elektroninsiirtoketjun entsyymien alayksiköitä koodaavissa geeneissä. Muutoksia todettiin useimmiten potilailla, joilla oli leukemiasoluissa huonon ennusteen geneettinen tekijä. Havaitut muutokset voivat mahdollisesti vaikuttaa leukemiasolun energia-aineenvaihduntaan.

Hematopoietic stem cells (HSCs) are critical to the development of the hematopoietic system during ontogeny and maintaining hematopoiesis under steady-state. Several genes implicated in asymmetric cell division (ACD) have been found to influence HSC self-renewal in normal hematopoiesis and various leukemias. From a separate survey of genes associated with ACD, I now present the results from dedicated functional studies on two genes – Arhgef2 and Staufen1 – in HSCs and identify their potential contributions to benign hematopoietic disorders. Specifically, I present evidence that demonstrates a conserved role of Arhgef2 in orienting HSC division, the loss of which leads to HSC exhaustion that may underlie and contribute to the pathogenesis of Shwachman-Diamond syndrome. I also identify Staufen1 as a critical RNA-binding protein (RBP) in HSC function, downregulation of which elicits expression signatures consistent with clinical anemias reminiscent of aplastic anemia and/or paroxysmal nocturnal hemoglobinuria. I end by reviewing how RBPs function in HSCs and discuss future research directions that could further elucidate how bone marrow failure syndromes arise at the stem cell level. / Thesis / Doctor of Philosophy (PhD)

Anemia aplástica adquirida (AAA) é doença rara e seu diagnóstico diferencial inclui a Síndrome mielodisplásica hipocelular (SMD-h). A evolução de AAA para SMD/LMA (Síndrome mielodisplásica/Leucemia mieloide aguda) ocorre em até 15% dos casos. Este estudo propõe-se a comparar parâmetros histológicos e imuno-histoquímicos de pacientes adultos e crianças com AAA que evoluíram e não para SMD/LMA. Seu objetivo é avaliar a ocorrência dos critérios morfológicos/imunofenotípicos nas biópsias de medula óssea do grupo pediátrico (<19 anos) com o grupo de adultos, comparar esses critérios associados à evolução para SMD/LMA nestes dois grupos e verificar se estes critérios superpõem-se àqueles descritos na literatura na SMD-hipocelular do adulto e, mais recentemente, na SMD pediátrica (Citopenia refratária da infância - CRI). Espera-se trazer uma contribuição para a discussão da intersecção entre essas entidades e a AAA, estudando essa \"zona cinzenta\" do ponto de vista dos pacientes com AAA, particularmente aqueles que progrediram para SMD/LMA. Foram analisadas, retrospectivamente, 118 biópsias de medula óssea ao diagnóstico de AAA, idiopática ou não, realizadas no Hospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo entre 1993 e 2012. O diagnóstico de AAA foi estabelecido de acordo com critérios clássicos. A evolução de AAA para SMD ou LMA foi considerada na presença de: disgranulopoese ou dismegacariopoese acentuadas, mais de 15% de sideroblastos em anel, blastos em sangue periférico ou mais de 5% de blastos na medula óssea ao mielograma e/ou à biópsia de medula óssea ou na presença de estudo citogenético (FISH ou cariótipo) da medula óssea, apresentando monossomia ou deleção do braço longo do cromossomo 7. Todas as biópsias foram submetidas à análise morfológica e imuno-histoquímica (MPO, Glicoforina A, Fator VIII, CD34, CD117 e Ki-67) por dois hematopatologistas sem conhecimento prévio da evolução dos pacientes. As variáveis qualitativas nominais foram analisadas pelo teste exato de Fisher para verificar se houve desproporção significativa entre os grupos. As variáveis qualitativas ordinais foram analisadas para a diferença entre os grupos pelo teste de Mann-Whitney. O nível de significância adotado foi 5% (p=0,05). A correlação entre os valores de celularidade geral das amostras e seu índice proliferativo foi avaliada pelo teste não paramétrico Rô de Spearman. Setenta e um pacientes (60,2%) eram do gênero masculino com mediana de idade 24,4 anos (mínimo de 7 meses até 76 anos), 42 do grupo pediátrico e 76 adultos, e tempo de seguimento de 5,1 anos (de 1 mês a 22,1 anos). Doze (10,2%) (seis em cada grupo) pacientes evoluíram para SMD/LMA. Avaliação dos parâmetros morfológicos e imuno-histoquímicos mostrou distribuição irregular do tecido hematopoético em 59 (50%) casos, mediana de celularidade geral de 10% (de 1% a 40%), distúrbio de maturação da série granulocítica (critério 1) em três (2,5%) casos, localização anormal da eritropoiese em 13 (11%) casos, agregados de pelo menos 20 precursores eritroides (critério 2), em 54 (45,7%) casos, presença de formas jovens eritroides (proeritroblastos) (critério 3) em 32 (27,1%) casos, aumento do número de mitoses dos elementos eritroides (critério 4) em 24 (20,3%) casos, displasia de megacariócitos (micromegacariócitos, megacariócitos bi ou multinucleados e elementos hipo ou monolobados) (critério 5) em 15 (12,7%) casos, localização anormal de megacariócitos em quatro (3,3%) casos, megacariócitos CD34-positivos não foram identificados, blastos CD34-positivos em 11 (9,3%) casos, reticulogênese discretamente aumentada (grau 1) em três (2,5%) casos e índice proliferativo (Ki-67) com mediana de 30 (de 0% a 90%). Critérios descritos por Bennett e Orazi sugestivos de SMD-h (critérios 1 e/ou 5) foram detectados em 16 (13,6%) casos. Critérios descritos por Baumann et al. sugestivos de SMD da infância (critérios 2 + 3 com ou sem 4) foram observados em 30 (25,4%) casos. Não houve diferença estatística nos achados morfológicos/imuno-histoquímicos entre a população total, adultos e crianças que evoluíram e que não evoluíram para SMD/LMA, incluindo a presença de critérios Bennett e Orazi para SMD-h do adulto. Houve diferença quanto aos critérios de Baumann et al. para CRI, e o grupo que não evoluiu para SMD/LMA apresentou com mais frequência os critérios do que o que evoluiu (p=0,036), ao contrário do previamente suposto. No entanto, ao testar esta hipótese no grupo adulto separado do pediátrico, a diferença estatística não foi comprovada. Houve uma correlação estatisticamente significante entre os valores da celularidade geral das amostras e seu índice proliferativo (p < 0,001). Pacientes adultos e pediátricos com AAA, incluindo os que evoluíram para SMD/LMA, têm características morfológicas/imuno-histoquímicas semelhantes. Algumas alterações descritas por Baumann et al. para SMD pediátrica são também encontradas em casos pediátricos e de adultos com AAA. Além disso, o índice proliferativo pode ser aumentado em casos de AAA, este dado não tem correlação com a evolução para SMD/LMA. Alterações morfológicas/imuno-histoquímicas em biópsias de medula óssea em AAA não identificaram um grupo com maior risco de progressão para SMD/LMA em nossa casuística / Acquired Aplastic Anemia (AAA) is a rare disease which progresses to MDS / AML in up to 15% of cases. When this happens, hematopathologists are asked whether the diagnosis of hypocellular Myelodisplastic Syndrome (h-MDS) would not have been confused morphologically with aplastic anemia. This study aims to identify morphological/immunophenotypical findings that could predict this adverse prognosis in adults and children ( < 19y) diagnosed as AAA and verify if those criteria match with the ones described in literature in adult h-MDS and, more recently, in pediatric MDS (Refractory cytopenia of childhood - RCC), contributing to the discussion of this \"grey zone\". We retrospectively analyzed 118 patients/bone marrow (BM) biopsies at the moment of AAA diagnosis at Clinical Hospital of São Paulo Medical School from 1993 to 2012. Diagnosis of AAA was carried out according to classical criteria. Evolution to MDS or AML was considered in the presence of at least one of the findings: significant dysgranulopoiesis or dysmegakaryocytopoiesis, more than 15% ring sideroblasts, blasts in peripheral blood or more than 5% blasts in bone marrow smear and/or biopsy, or in the presence of monosomy or deletion of the long arm of chromosome 7 by cytogenetic analysis (FISH or karyotype) of the BM. All biopsies were submitted to morphological and immunophenotypic (MPO, Glycophorin A, Factor VIII, CD34, CD117 and Ki67) evaluation by two hematopathologists without previous knowledge about the evolution of the patients. Nominal qualitative variables were analyzed by using Fisher\'s exact test to check significant disproportion between the groups. The ordinal qualitative variables were analyzed for differences between groups by Mann-Whitney test. The significance level was 5% (p = 0.05). The correlation between the overall cellularity values of the samples and their proliferative index was evaluated by nonparametric Spearman Rô test. Seventy-one (60,2%) were male, median age 24.4 years (7 months to 76 years old), 42 belongs to the pediatric group and 76 to the adults group. Median follow-up was 5.1y (range, 1 month to 22.1 years). Twelve patients (12%) (6 in each group) progressed to MDS/AML. Evaluation of morphological/immunohistochemical parameters showed irregular distribution of hematopoietic tissue in 59 (50%) cases, median BM overall cellularity of 10% (range, 1 to 40%), marrow dysgranulopoiesis (criteria 1) in 3 (2,5%) cases, abnormal localization of erythropoiesis in 13 (11%) cases, clusters of at least 20 erythroid precursors (criteria 2) in 54 (45.7%) cases, increased number of proerythroblasts (criteria 3) in 32 (27,1%) cases, increased number of mitoses of the erythroid elements (criteria 4) in 24 (20,3%) cases, marrow dysplasia of megakaryocytes (micromegakaryocytes , two or more separeted nuclei, small round nuclei) (criteria 5) in 15 (12,7%) cases, abnormal localization of megakaryocytes in 4 (3,3%) cases, CD34-positive megakaryocytes were not identified, CD34-positive blast cells (criteria 6) in 11 (9,3%) cases, increment in reticulin fibers in 3 (2,5%) cases, and median proliferative index (Ki-67) 30 (range, 0 to 90%). Criteria described by Bennett and Orazi suggestive of h-SMD (criteria 1 and/or 5) were detected in 16 (13,6%) cases. Criteria described by Baumann et al suggestive of childhood MDS (criteria 2 + 3 with or without 4) were observed in 30 (25.4%) cases. There was no statistical difference in morphological/immunohistochemical findings among total population, adults and children who developed and did not develop MDS/AML, including the presence of Bennett and Orazi criteria for h-MDS. Regarding Baumann et al criteria were more frequently identified in the group that did not progress to MDS/AML than the one that did (p=0,036), the opposite of what was expected. But when the criteria were tested in pediatric and adults\' groups separately, the statistical significance was no longer observed. There was a statistical significant correlation between the overall cellularity values of the samples and their proliferative index (p=0,001). Adult and pediatric patients with AAA, including those that progress to MDS/AML, have similar morphological/immunohistochemical characteristics. Some changes described by Baumann et al for pediatric MDS are also found in pediatric and adults\' cases with AAA. In addition, the proliferative index may be increased in cases of AAA and this finding has no correlation with progression to MDS/AML. Morphological/immunohistochemical changes in bone marrow biopsies in AAA have failed to identify a group at higher risk for progression to MDS/AML in our series

Anemia aplástica adquirida (AAA) é doença rara e seu diagnóstico diferencial inclui a Síndrome mielodisplásica hipocelular (SMD-h). A evolução de AAA para SMD/LMA (Síndrome mielodisplásica/Leucemia mieloide aguda) ocorre em até 15% dos casos. Este estudo propõe-se a comparar parâmetros histológicos e imuno-histoquímicos de pacientes adultos e crianças com AAA que evoluíram e não para SMD/LMA. Seu objetivo é avaliar a ocorrência dos critérios morfológicos/imunofenotípicos nas biópsias de medula óssea do grupo pediátrico (<19 anos) com o grupo de adultos, comparar esses critérios associados à evolução para SMD/LMA nestes dois grupos e verificar se estes critérios superpõem-se àqueles descritos na literatura na SMD-hipocelular do adulto e, mais recentemente, na SMD pediátrica (Citopenia refratária da infância - CRI). Espera-se trazer uma contribuição para a discussão da intersecção entre essas entidades e a AAA, estudando essa \"zona cinzenta\" do ponto de vista dos pacientes com AAA, particularmente aqueles que progrediram para SMD/LMA. Foram analisadas, retrospectivamente, 118 biópsias de medula óssea ao diagnóstico de AAA, idiopática ou não, realizadas no Hospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo entre 1993 e 2012. O diagnóstico de AAA foi estabelecido de acordo com critérios clássicos. A evolução de AAA para SMD ou LMA foi considerada na presença de: disgranulopoese ou dismegacariopoese acentuadas, mais de 15% de sideroblastos em anel, blastos em sangue periférico ou mais de 5% de blastos na medula óssea ao mielograma e/ou à biópsia de medula óssea ou na presença de estudo citogenético (FISH ou cariótipo) da medula óssea, apresentando monossomia ou deleção do braço longo do cromossomo 7. Todas as biópsias foram submetidas à análise morfológica e imuno-histoquímica (MPO, Glicoforina A, Fator VIII, CD34, CD117 e Ki-67) por dois hematopatologistas sem conhecimento prévio da evolução dos pacientes. As variáveis qualitativas nominais foram analisadas pelo teste exato de Fisher para verificar se houve desproporção significativa entre os grupos. As variáveis qualitativas ordinais foram analisadas para a diferença entre os grupos pelo teste de Mann-Whitney. O nível de significância adotado foi 5% (p=0,05). A correlação entre os valores de celularidade geral das amostras e seu índice proliferativo foi avaliada pelo teste não paramétrico Rô de Spearman. Setenta e um pacientes (60,2%) eram do gênero masculino com mediana de idade 24,4 anos (mínimo de 7 meses até 76 anos), 42 do grupo pediátrico e 76 adultos, e tempo de seguimento de 5,1 anos (de 1 mês a 22,1 anos). Doze (10,2%) (seis em cada grupo) pacientes evoluíram para SMD/LMA. Avaliação dos parâmetros morfológicos e imuno-histoquímicos mostrou distribuição irregular do tecido hematopoético em 59 (50%) casos, mediana de celularidade geral de 10% (de 1% a 40%), distúrbio de maturação da série granulocítica (critério 1) em três (2,5%) casos, localização anormal da eritropoiese em 13 (11%) casos, agregados de pelo menos 20 precursores eritroides (critério 2), em 54 (45,7%) casos, presença de formas jovens eritroides (proeritroblastos) (critério 3) em 32 (27,1%) casos, aumento do número de mitoses dos elementos eritroides (critério 4) em 24 (20,3%) casos, displasia de megacariócitos (micromegacariócitos, megacariócitos bi ou multinucleados e elementos hipo ou monolobados) (critério 5) em 15 (12,7%) casos, localização anormal de megacariócitos em quatro (3,3%) casos, megacariócitos CD34-positivos não foram identificados, blastos CD34-positivos em 11 (9,3%) casos, reticulogênese discretamente aumentada (grau 1) em três (2,5%) casos e índice proliferativo (Ki-67) com mediana de 30 (de 0% a 90%). Critérios descritos por Bennett e Orazi sugestivos de SMD-h (critérios 1 e/ou 5) foram detectados em 16 (13,6%) casos. Critérios descritos por Baumann et al. sugestivos de SMD da infância (critérios 2 + 3 com ou sem 4) foram observados em 30 (25,4%) casos. Não houve diferença estatística nos achados morfológicos/imuno-histoquímicos entre a população total, adultos e crianças que evoluíram e que não evoluíram para SMD/LMA, incluindo a presença de critérios Bennett e Orazi para SMD-h do adulto. Houve diferença quanto aos critérios de Baumann et al. para CRI, e o grupo que não evoluiu para SMD/LMA apresentou com mais frequência os critérios do que o que evoluiu (p=0,036), ao contrário do previamente suposto. No entanto, ao testar esta hipótese no grupo adulto separado do pediátrico, a diferença estatística não foi comprovada. Houve uma correlação estatisticamente significante entre os valores da celularidade geral das amostras e seu índice proliferativo (p < 0,001). Pacientes adultos e pediátricos com AAA, incluindo os que evoluíram para SMD/LMA, têm características morfológicas/imuno-histoquímicas semelhantes. Algumas alterações descritas por Baumann et al. para SMD pediátrica são também encontradas em casos pediátricos e de adultos com AAA. Além disso, o índice proliferativo pode ser aumentado em casos de AAA, este dado não tem correlação com a evolução para SMD/LMA. Alterações morfológicas/imuno-histoquímicas em biópsias de medula óssea em AAA não identificaram um grupo com maior risco de progressão para SMD/LMA em nossa casuística / Acquired Aplastic Anemia (AAA) is a rare disease which progresses to MDS / AML in up to 15% of cases. When this happens, hematopathologists are asked whether the diagnosis of hypocellular Myelodisplastic Syndrome (h-MDS) would not have been confused morphologically with aplastic anemia. This study aims to identify morphological/immunophenotypical findings that could predict this adverse prognosis in adults and children ( < 19y) diagnosed as AAA and verify if those criteria match with the ones described in literature in adult h-MDS and, more recently, in pediatric MDS (Refractory cytopenia of childhood - RCC), contributing to the discussion of this \"grey zone\". We retrospectively analyzed 118 patients/bone marrow (BM) biopsies at the moment of AAA diagnosis at Clinical Hospital of São Paulo Medical School from 1993 to 2012. Diagnosis of AAA was carried out according to classical criteria. Evolution to MDS or AML was considered in the presence of at least one of the findings: significant dysgranulopoiesis or dysmegakaryocytopoiesis, more than 15% ring sideroblasts, blasts in peripheral blood or more than 5% blasts in bone marrow smear and/or biopsy, or in the presence of monosomy or deletion of the long arm of chromosome 7 by cytogenetic analysis (FISH or karyotype) of the BM. All biopsies were submitted to morphological and immunophenotypic (MPO, Glycophorin A, Factor VIII, CD34, CD117 and Ki67) evaluation by two hematopathologists without previous knowledge about the evolution of the patients. Nominal qualitative variables were analyzed by using Fisher\'s exact test to check significant disproportion between the groups. The ordinal qualitative variables were analyzed for differences between groups by Mann-Whitney test. The significance level was 5% (p = 0.05). The correlation between the overall cellularity values of the samples and their proliferative index was evaluated by nonparametric Spearman Rô test. Seventy-one (60,2%) were male, median age 24.4 years (7 months to 76 years old), 42 belongs to the pediatric group and 76 to the adults group. Median follow-up was 5.1y (range, 1 month to 22.1 years). Twelve patients (12%) (6 in each group) progressed to MDS/AML. Evaluation of morphological/immunohistochemical parameters showed irregular distribution of hematopoietic tissue in 59 (50%) cases, median BM overall cellularity of 10% (range, 1 to 40%), marrow dysgranulopoiesis (criteria 1) in 3 (2,5%) cases, abnormal localization of erythropoiesis in 13 (11%) cases, clusters of at least 20 erythroid precursors (criteria 2) in 54 (45.7%) cases, increased number of proerythroblasts (criteria 3) in 32 (27,1%) cases, increased number of mitoses of the erythroid elements (criteria 4) in 24 (20,3%) cases, marrow dysplasia of megakaryocytes (micromegakaryocytes , two or more separeted nuclei, small round nuclei) (criteria 5) in 15 (12,7%) cases, abnormal localization of megakaryocytes in 4 (3,3%) cases, CD34-positive megakaryocytes were not identified, CD34-positive blast cells (criteria 6) in 11 (9,3%) cases, increment in reticulin fibers in 3 (2,5%) cases, and median proliferative index (Ki-67) 30 (range, 0 to 90%). Criteria described by Bennett and Orazi suggestive of h-SMD (criteria 1 and/or 5) were detected in 16 (13,6%) cases. Criteria described by Baumann et al suggestive of childhood MDS (criteria 2 + 3 with or without 4) were observed in 30 (25.4%) cases. There was no statistical difference in morphological/immunohistochemical findings among total population, adults and children who developed and did not develop MDS/AML, including the presence of Bennett and Orazi criteria for h-MDS. Regarding Baumann et al criteria were more frequently identified in the group that did not progress to MDS/AML than the one that did (p=0,036), the opposite of what was expected. But when the criteria were tested in pediatric and adults\' groups separately, the statistical significance was no longer observed. There was a statistical significant correlation between the overall cellularity values of the samples and their proliferative index (p=0,001). Adult and pediatric patients with AAA, including those that progress to MDS/AML, have similar morphological/immunohistochemical characteristics. Some changes described by Baumann et al for pediatric MDS are also found in pediatric and adults\' cases with AAA. In addition, the proliferative index may be increased in cases of AAA and this finding has no correlation with progression to MDS/AML. Morphological/immunohistochemical changes in bone marrow biopsies in AAA have failed to identify a group at higher risk for progression to MDS/AML in our series

Au cours de leur développement, les cellules du système hématopoïétique sont très exposées aux dommages à l’ADN qui peuvent avoir une origine exogène ou endogène. Les organismes vivants ont développé de nombreux mécanismes de réparation pour y faire face, et leur dysfonctionnement est responsable de maladies rares mais sévères chez l’Homme. Un des deux mécanismes de réparation des cassures double-brin (CDB) de l’ADN joue un rôle prépondérant dans le développement du système immunitaire (SI) des mammifères. Il s’agit de la voie de réparation des extrémités non-homologues (NHEJ) qui est absolument essentiel au bon déroulement de la recombinaison V(D)J dans les progéniteurs lymphocytaires de la moelle osseuse et du thymus. En effet, la formation de CDB de l’ADN est une étape clé de ce remaniement. De même, bien que dans une moindre mesure, le NHEJ intervient pour réparer les cassures induites par AID lors de la commutation de classe des immunoglobulines (Ig- CSR). Notre équipe a précédemment identifié un nouveau facteur du NHEJ, Cernunnos (ou XLF), responsable chez l’Homme de déficit immunitaire combiné sévère (DCIS) associé à une sensibilité aux rayonnements ionisants (RI) et à une microcéphalie. Afin de mieux comprendre le rôle de Cernunnos dans le système hématopoïétique et dans le développement des lymphocytes en particulier, nous avons créé un modèle murin invalidé pour ce gène. De façon surprenante, le développement lymphocytaire se fait quasi normalement dans ces souris, le seul défaut observé est une diminution du nombre de lymphocytes. Cependant, l’analyse fine du répertoire des cellules T a permis de mettre en évidence un biais dans l’utilisation des segments variables V et J de la chaîne α du récepteur (TCRα). Ce serait là la signature d’un défaut de survie des thymocytes, passant par une activation chronique de la voie de l’apoptose dépendante de p53 en réponse à l’accumulation de dommages de l’ADN. Certaines sous- populations de lymphocytes T, comme les iNKTs et les MAITs, seraient ainsi affectées. Par ailleurs, notre équipe poursuit la caractérisation génétique et fonctionnelle de pathologies chez des patients dont le tableau clinique laisse penser qu’il existe un déficit immunitaire ou hématologique primaire associé à un défaut de réparation de l’ADN. Nous nous sommes intéressés à un patient dont le tableau clinique combinant déficit hématopoïétique et instabilité génomique suggère une origine génétique forte. Grâce aux techniques de séquençage haut- débit et à l’étude de ségrégation au sein de la famille nous avons pu isoler plusieurs mutations dont une nous a interpellé plus particulièrement / Throughout their development, hematopoietic cells are exposed to many DNA damages of either exogenous or endogenous origin. Living organisms evolved a variety of DNA repair mechanisms in order to face those threats, and their impairment leads to rare but severe diseases in human. Of the two mechanisms involved in the repair of DNA double-strand break (DSB) repair, one plays a major role in mammal’s Immune System (IS). The non-homologous end joining (NHEJ) pathway is essential for the correct proceeding of V(D)J recombination in lymphocyte progenitors from bone marrow and thymus. Indeed, the formation of DNA DSB is a key step of the rearrangement. In similar fashion, though to a lesser degree, NHEJ is involved in repair of AID induced breaks during immunoglobulin class switch recombination (Ig-CSR). Our team previously identified a new NHEJ factor, Cernunnos (or XLF), as being responsible for a human syndrome of severe combined immunodeficiency (SCID) associated with ionizing radiation (IR) sensitivity (RS-SCID) and microcephaly. To better understand Cernunnos role in the hematopoietic system and particularly in lymphocyte development, we engineered a knock-out (KO) mouse model for this gene. Surprisingly, lymphocyte development is almost normal in these mice, the only defect observed being a decrease of lymphocyte number. However, a refined analysis of T cell repertoire allowed us to uncover a bias in the use of V and J segments from the receptor’s α chain (TCRα). This is the signature of a survival defect in thymocytes, caused by chronic activation of the p53 dependent apoptosis pathway in response to DNA damage. Some discrete T cell populations, such as iNKTs and MAITS, would be affected. In the meantime, our team pursues the uncovering of genetic diseases and their functional description in patients showing signs of immune or hematopoietic deficiency combined to impaired DNA repair. We focused on a patient harboring clinical signs of genomic instability and hematopoietic defects with strong evidence for genetic cause. Thanks to high-throughput DNA sequencing technology and whole genome association study (WGAS), we identified several mutations, one of them striking us as pertinent