Advances in protein topology mapping methods are urgently needed to complement the wealth of interactome data that is presently being generated at a rapid pace. Chemical crosslinking followed by mass spectrometry (MS) has evolved over the last decade as an attractive method for protein topology and interface mapping, and holds great promise as a counterpart to modern interactome studies in the field of proteomics. Furthermore, stabilization of proteins and protein complexes with crosslinking offers many advantages over high-resolution structural mapping methods, including the ability to study protein topologies in vivo. The reliance on direct detection of crosslinked peptides, however, continues to pose challenges to protein topology and interface mapping with chemical crosslinking plus MS. The present body of work aimed to develop a novel generic methodology that utilizes chemical crosslinking, cyanogen bromide (CNBr) cleavage and MS for the low-resolution mapping of protein topologies and interfaces. Through such low-resolution mapping of crosslinked regions, this novel strategy overcomes limitations associated with the direct detection of crosslinked peptides. Following optimization of various steps, the present method was validated with the bacterial DNA-directed RNA polymerase core complex and was subsequently applied to probe the tetrameric assembly of yeast Skp1p-Cdc4p heterodimers. Further improvements were made through the enrichment of crosslinked CNBr-cleaved protein fragments prior to their identification via MS. Two enrichment strategies were developed which depended upon the conjugation of tags to CNBr-cleaved peptide C-termini followed by either tandem affinity purification or tandem reversed-phase HPLC purification. These strategies were successfully applied for the efficient purification of disulfide-linked peptides from peptide mixtures. It is expected that the potential to achieve sensitive mapping of topologies and interfaces of multi-subunit protein complexes in vivo, in combination with further enhancements to permit studies on complex protein samples, will extend the utility of this method to complement large-scale interactome studies.

Advances in protein topology mapping methods are urgently needed to complement the wealth of interactome data that is presently being generated at a rapid pace. Chemical crosslinking followed by mass spectrometry (MS) has evolved over the last decade as an attractive method for protein topology and interface mapping, and holds great promise as a counterpart to modern interactome studies in the field of proteomics. Furthermore, stabilization of proteins and protein complexes with crosslinking offers many advantages over high-resolution structural mapping methods, including the ability to study protein topologies in vivo. The reliance on direct detection of crosslinked peptides, however, continues to pose challenges to protein topology and interface mapping with chemical crosslinking plus MS. The present body of work aimed to develop a novel generic methodology that utilizes chemical crosslinking, cyanogen bromide (CNBr) cleavage and MS for the low-resolution mapping of protein topologies and interfaces. Through such low-resolution mapping of crosslinked regions, this novel strategy overcomes limitations associated with the direct detection of crosslinked peptides. Following optimization of various steps, the present method was validated with the bacterial DNA-directed RNA polymerase core complex and was subsequently applied to probe the tetrameric assembly of yeast Skp1p-Cdc4p heterodimers. Further improvements were made through the enrichment of crosslinked CNBr-cleaved protein fragments prior to their identification via MS. Two enrichment strategies were developed which depended upon the conjugation of tags to CNBr-cleaved peptide C-termini followed by either tandem affinity purification or tandem reversed-phase HPLC purification. These strategies were successfully applied for the efficient purification of disulfide-linked peptides from peptide mixtures. It is expected that the potential to achieve sensitive mapping of topologies and interfaces of multi-subunit protein complexes in vivo, in combination with further enhancements to permit studies on complex protein samples, will extend the utility of this method to complement large-scale interactome studies.

Trimesoyl chloride (TMC) crosslinked poly(vinyl alcohol) (PVA) / chitosan (CS) membranes and synthetic polyimide membranes were prepared for pervaporation dehydration of isopropanol and gas separation. PVA membranes were interfacially crosslinked with different amounts of TMC/hexane, and the degree of crosslinking was characterized by Fourier Transform Infrared Spectroscopy - Attenuated Total Reflectance Spectroscopy (FTIR-ATR) and water uptake. The asymmetric structure of the PVA-TMC membranes was revealed by FTIR-ATR. Thermal analysis was performed to understand the pyrolysis mechanism, which was supposed to be a combination of elimination of water and/or trimesic acid followed by breakage of the main chain. Water permeation and pervaporation dehydration of isopropanol were conducted, and the results showed that PVA-3TMC had the best overall pervaporation properties among the four PVA-TMC membranes studied. Sorption properties and pervaporation behavior of the PVA-3TMC membrane were investigated. The effects of water/isopropanol on the polymer matrix and the possible change of the degree of crystallinity induced by the sorbed water were believed to account for the sorption properties. For water permeation and pervaporation dehydration of isopropanol in a heating-cooling cycle, the permeation flux did not change significantly, and the selectivity was improved by the formation of crystallites during the heating run. For pervaporation in the diluting and concentrating runs at 60 °C, there was no change in the membrane permeability. Chitosan membranes were interfacially crosslinked in TMC/hexane with different crosslinking time. The membrane with a higher degree of crosslinking showed a higher degree of swelling in water at room temperature. A two-stage thermal decomposition mechanism was proposed based on thermal analyses. Pure gas permeation was performed with CO2 and N2 at room temperature, and CS-TMC-2 showed the best performance, with a CO2 permeability of ~163 Barrer and a CO2/N2 permeability ratio of ~42. Pervaporation was carried out for dehydration of isopropanol with the unconditioned and conditioned membranes, and the CS-TMC-3 membrane showed the best pervaporation performance. Pervaporation and gas separation properties were affected by the crosslinking-induced relaxation and the mobility/packing properties of the CS-TMC matrices. 4,4'-(Hexafluoroisopropylidene) diphthalic anhydride (6FDA)-based and 2,2-bis[4-(3,4-dicarboxyphenoxy) phenyl]propane dianhydride (BPADA)-based copolyimides were synthesized from one-step high-temperature polymerization in m-cresol. Polymers were characterized with Gel Permeation Chromatography (GPC), FTIR, Nuclear Magnetic Resonance Spectroscopy (NMR), Differential Scanning Calorimetry (DSC) and Thermogravimetric Analysis (TGA). Surface free energies and interfacial free energies were calculated from contact angles to characterize hydrophilicity of the polyimide membranes. Gas permeation properties of 6FDA-based copolyimide membranes were studied with N2, O2, H2, He and CO2, and pervaporation dehydration of isopropanol was performed with 6FDA-based and BPADA-based membranes. An empirical linear moiety contribution approach was proposed, and the moiety contribution factors were used to illustrate the effects of dianhydrides and diamines on permselectivities of the copolyimide membranes. Bulky side groups, flexibility of polymer main chains, structures of monomer moieties, and interactions between gas molecules and polymer chains were shown to affect gas permselectivities, while in pervaporation, both sorption and diffusion properties were affected by the interactions between penetrants and polymer matrices as well as the steric effects of monomer moieties.

Trimesoyl chloride (TMC) crosslinked poly(vinyl alcohol) (PVA) / chitosan (CS) membranes and synthetic polyimide membranes were prepared for pervaporation dehydration of isopropanol and gas separation. PVA membranes were interfacially crosslinked with different amounts of TMC/hexane, and the degree of crosslinking was characterized by Fourier Transform Infrared Spectroscopy - Attenuated Total Reflectance Spectroscopy (FTIR-ATR) and water uptake. The asymmetric structure of the PVA-TMC membranes was revealed by FTIR-ATR. Thermal analysis was performed to understand the pyrolysis mechanism, which was supposed to be a combination of elimination of water and/or trimesic acid followed by breakage of the main chain. Water permeation and pervaporation dehydration of isopropanol were conducted, and the results showed that PVA-3TMC had the best overall pervaporation properties among the four PVA-TMC membranes studied. Sorption properties and pervaporation behavior of the PVA-3TMC membrane were investigated. The effects of water/isopropanol on the polymer matrix and the possible change of the degree of crystallinity induced by the sorbed water were believed to account for the sorption properties. For water permeation and pervaporation dehydration of isopropanol in a heating-cooling cycle, the permeation flux did not change significantly, and the selectivity was improved by the formation of crystallites during the heating run. For pervaporation in the diluting and concentrating runs at 60 °C, there was no change in the membrane permeability. Chitosan membranes were interfacially crosslinked in TMC/hexane with different crosslinking time. The membrane with a higher degree of crosslinking showed a higher degree of swelling in water at room temperature. A two-stage thermal decomposition mechanism was proposed based on thermal analyses. Pure gas permeation was performed with CO2 and N2 at room temperature, and CS-TMC-2 showed the best performance, with a CO2 permeability of ~163 Barrer and a CO2/N2 permeability ratio of ~42. Pervaporation was carried out for dehydration of isopropanol with the unconditioned and conditioned membranes, and the CS-TMC-3 membrane showed the best pervaporation performance. Pervaporation and gas separation properties were affected by the crosslinking-induced relaxation and the mobility/packing properties of the CS-TMC matrices. 4,4'-(Hexafluoroisopropylidene) diphthalic anhydride (6FDA)-based and 2,2-bis[4-(3,4-dicarboxyphenoxy) phenyl]propane dianhydride (BPADA)-based copolyimides were synthesized from one-step high-temperature polymerization in m-cresol. Polymers were characterized with Gel Permeation Chromatography (GPC), FTIR, Nuclear Magnetic Resonance Spectroscopy (NMR), Differential Scanning Calorimetry (DSC) and Thermogravimetric Analysis (TGA). Surface free energies and interfacial free energies were calculated from contact angles to characterize hydrophilicity of the polyimide membranes. Gas permeation properties of 6FDA-based copolyimide membranes were studied with N2, O2, H2, He and CO2, and pervaporation dehydration of isopropanol was performed with 6FDA-based and BPADA-based membranes. An empirical linear moiety contribution approach was proposed, and the moiety contribution factors were used to illustrate the effects of dianhydrides and diamines on permselectivities of the copolyimide membranes. Bulky side groups, flexibility of polymer main chains, structures of monomer moieties, and interactions between gas molecules and polymer chains were shown to affect gas permselectivities, while in pervaporation, both sorption and diffusion properties were affected by the interactions between penetrants and polymer matrices as well as the steric effects of monomer moieties.

In vorangegangenen Arbeiten im eigenen Arbeitskreis wurden sensitive Hydrogelpartikel im mm- und μm-Bereich synthetisiert. Die Reaktion dieser Gele auf Änderung des einwirkenden Stimulus war jedoch nicht schnell genug für die gewünschten Anwendungen in Mikroventilen. Die verwendeten Polymere waren statistische Copolymere aus einem Chromophor (DMIAAm) und einem sensitiven Monomer (NIPAAm) und wiesen daher sehr breite Molmassenverteilungen auf. Mit Hilfe des Chromophores wurde es möglich, Hydrogele im Submikrometerbereich zu synthetisieren. Bei der Vernetzung dieser Polymere mit UVBestrahlung musste immer ein Tensid (SDS) zugesetzt werden, um die Bildung kleiner Aggregate zu unterstützen und gleichzeitig die Bildung großer zu unterdrücken. Ein solches Tensid kann die Anwendung dieser Hydrogele in bestimmten Bereichen, wie in der Medizin, verhindern. Es sollen daher tensidfrei Hydrogele synthetisiert werden. Für die Vernetzung sollte auf die photochemische Variante mit DMIAAm als Chromophor zurückgegriffen werden. Als Ausgangspolymere wären Di- bzw. Triblockcopolymere denkbar, die in wässriger Lösung zu einer Mizellbildung neigen. Aus den oben genannten Problemen ergab sich die folgende Zielstellung für die Arbeit. Es sollten sensitive Hydrogelpartikel erzeugt werden, die in der Lage sind, schnell auf eine Änderung der Temperatur zu reagieren. Eine kurze Reaktionszeit ist nur von Gelpartikeln mit kleinen Dimensionen im nm-Bereich zu erwarten. Weiterhin sollen diese Partikel mit einer Hülle umgeben werden, die für eine Stabilisierung sorgt und die Bildung größerer Aggregate unterbindet. Die Hülle muss so beschaffen sein, dass die Volumenänderung des sensitiven Blocks nicht beeinflusst wird. In dieser Dissertation wurde die kontrollierte radikalische Polymerisation von Acrylaten und Acrylamiden untersucht. Als Methode kam die Reversible-Addition-Fragmentation-chain-Transfer (RAFT) Polymerisation zum Einsatz. Die RAFT wurde gewählt, weil diese im Gegensatz zur ATRP metallionenfrei verläuft und die NMRP nicht für Acrylate geeignet ist. Bei den RAFT-Polymerisationen der verschiedenen Monomere wurden vier unterschiedliche Kettenüberträger verwendet (Schema 33) und folgende Ergebnisse erhalten. Als Lösungsmittel kam 1,4-Dioxan in den Polymerisationen zum Einsatz.

No description available.

In this study, polyelectrolyte membranes were prepared by layer-by-layer self-assembly on top of an interfacially polymerized polyamide substrate, and these thin-film-composite membranes were studied for pervaporative dehydration of ethylene glycol, ethanol and isopropanol. The performance of composite membranes based on polyethylenimine/poly(acrylic acid) (PEI/PAA) multilayers on a polyamide substrate showed good selectivity and stability for ethylene glycol dehydration. In order to understand the formation process of the polyelectrolyte multilayers, the growth of polyelectrolyte multilayers fabricated on the inner surface of cuvette was investiagted. The membrane surface became increasingly hydrophilic with an increase in the number of polyelectrolyte double layers, which favored water permeation for pervaporative dehydration of organic solvents. Water contact angle on the membrane surface decreased from 68?? to 20?? when 7 polyelectrolyte bilayers were deposited on the polyamide substrate. Although the (PEI/PAA) based polyelectrolyte membranes showed good performance for dehydration of ethylene glycol, these membranes did not perform well for the dehydration of ethanol and isopropanol at relatively high feed alcohol concentrations. This was found to be caused by insufficient stability of PEI/PAA bilayers and the polyamide substrate in the ethanol and isopropanol. To improve the performance of the composite membranes for dehydration of ethanol and isopropanol, the outermost surface layer was deposited with PEI, followed by crosslinking. A further improvement in the membrane selectivity was accomplished by substituting the PEI with partially protonated chitosan in the last few polyelectrolyte bilayers during membrane fabrication. It was demonstrated that using interfacially polymerized polyamide membrane as a substrate, polyelectrolyte membranes with less than 8 bilayers could be fabricated for the dehydration of alcohol and diol. This represents a siginificant advancement as a large number of polyelectrolyte bilayers (as many as 60) are often needed. Glutaraldehyde crosslinked polyelectrolyte self-assembled membranes comprising of chitosan and PAA were also prepared for isopropanol/water separation. The resulting membrane showed stable performance with good permeation flux and separation factor. The effects of crosslinking conditions (e.g., concentration and temperature of crosslinking agent, and crosslinking time) on the membrane performance were studied. Alternatively, using PEI as polycation, when anionic PAA was substituted with alginate in the last few polyelectrolyte bilayers during membrane fabrication, stable membranes with a good performance were obtained without the need of chemical crosslinking. The polyethylenimine/alginate self-assembly membranes showed good selectivity and stability for dehydration of ethanol. For instance, a permeation flux of 0.24 kg/(??? h) and a separation factor of 206 were obtained at room temperature at 10 wt% feed water concentration with a membrane comprising of 10 double layers of polyelectrolytes.

"Multi-functionalized Side-chain Supramolecular Polymers:A Methodology Towards Tunable Functional Materials". Even as we see a significant growth in the field of side-chain supramolecular polymers in the last ten years, systems employing multiple non-covalent interactions have been scarcely studied. Non-covalent multi-functionalization provides unique advantages such as rapid optimization via reversible functionalization as well as for the tuning of materials properties by exploiting the differences in the nature of these reversible interactions. This thesis involves the design principles, synthesis & methodology of side-chain multi-functionalized polymers. The combination of the principles of a functionally tolerant & a controlled polymerization technique such as ROMP with multiple noncovalent interactions such as hydrogen bonding, metal coordination & Coulombic self-assembly has been used to synthesize multi-functionalized polymers. Furthermore, the orthogonality between hydrogen bonding, metal coordination & ionic self-assembly in random/block copolymers has been studied in detail. In order to validate the viability of this multi-functionalization methodology towards materials design non-covalent crosslinking of polymers was used as a potential application. Three classes of crosslinked networks have been studied: complementary multiple-hydrogen bonded networks, multiple-metal crosslinked networks, & multi-functionalized hydrogen bonded & metal coordinated networks. By using non-covalent multi-functionalization, important materials properties & its responsiveness towards chemical agents have been tuned & controlled to yield novel materials which would be difficult to be obtained via traditional covalent techniques or by using single non-covalent interactions.

Recombinant synthesis of elastin-mimetic proteins has been employed for several decades, however, long-term biocompatibility and biostability of such proteins was not fully defined. We present virtually crosslinked elastin-mimetic proteins which exhibit exceptional biocompatibility and long-term biostability over a period of at least seven months. This report is the first evidence of a non-chemically or ionically crosslinked system that exhibits long-term in vivo stability. Although, physically crosslinked protein-based materials possess a number of advantages over their chemically crosslinked counterparts, physical crosslinks and the related domains so formed may be deformed or damaged at applied stresses lower than those required to disrupt covalent crosslinks. In this regard, we have synthesized a new class of recombinant elastin-mimetic triblock copolymer capable of both physical and chemical crosslinking. We have demonstrated that chemical crosslinking provides an independent mechanism for control of protein mechanical responses. Specifically, elastic modulus was enhanced and creep strain reduced through the addition of chemical crosslinking sites. A number of reports have described the design of synthetic genes, which encode elastin-like proteins for bacterial expression in Escherichia coli. Although advantages with this expression system exist, significant limitations including the lack of eukaryotic post-translational systems, the tendency to sequester mammalian proteins into inclusion bodies, difficult purification protocols, and endotoxin contamination have been noted. We demonstrate the expression of a recombinant elastin-mimetic protein from P. pastoris. A novel synthetic strategy, monomer library concatamerization, was utilized in designing non-repetitive elastin genes for highly repetitive protein sequences. It is likely that this strategy will be useful for creating large, repetitive genes for a variety of expression systems in order to more closely approach the genetic diversity inherent to native DNA sequences. All told, elastin-based protein polymers are a promising class of material characterized by high degree of biocompatibility, excellent biostability, and a tunable range of mechanical properties from plastic to elastic. A variety of options facilitate the processing of these biopolymers into chemically crosslinked or non-crosslinked gels, films, or nanofibers for any of a number of implant applications including structural components of artificial organs and engineered living tissues, carriers for controlled drug release, or biocompatible surface coatings.

Title from second page of PDF document. Includes bibliographical references (p. Xx-Xx).