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Factors influencing the biogeography of bacteria in fresh waters - a metacommunity approachLogue, Jürg Brendan January 2010 (has links)
One of ecology’s primary goals is to comprehend biodiversity and its patterns of distribution over space and time. Since microorganisms play a pivotal role in key ecological processes, the diversity of microbial communities may have important implications for the stability and functioning of Earth’s ecosystems. Thus, it is of utmost importance to develop a theoretical foundation but also a conceptual understanding for the mechanisms that generate and maintain microbial diversity. The aim of this thesis is to investigate to what extent local freshwater bacterioplankton diversity, i.e. richness and community composition, is structured by local environmental interactions and/or regional processes. The key objective is to identify ecological linkages between lake bacterioplankton and bacterial communities in connected streams and the surrounding terrestrial landscape, thereby applying a metacommunity approach. To do so, I studied several natural lake bacterioplankton assemblies within different regions of Sweden and assessed both local environmental properties and regional parameters (e.g. dispersal, landscape position). The genetic composition of freshwater bacterioplankton diversity was determined by means of terminal-restriction fragment length polymorphism or 454 pyrosequencing. From the review on the biogeography of bacterioplankton in inland waters it became clear that microbial diversity and its spatial distribution are governed by a complex interplay of both local and regional drivers. In one case, freshwater bacterioplankton communities were structured by local environmental conditions rather than by regional dispersal processes. These local environmental conditions seemed to be equally important in controlling both the total bacterioplankton community and its active fraction. In a study of bacterioplankton communities from five different regions, locally abundant aquatic bacteria were shown to be also regionally widespread, a pattern predicted by neutral theory. Yet, this degree of similarity decreased with increasing environmental heterogeneity. In another study, bacterioplankton richness was controlled mostly by nutrient content, indicating that productivity exerted influence on bacterioplankton richness. However, landscape position and productivity covaried, suggesting that the landscape dictates environmental properties, which then directly structure local bacterioplankton richness. Finally, a review synthesising results from empirical metacommunity approaches and comparing these to theory showed that yet a gap between empirics and theory exists. To conclude, local bacterioplankton diversity appeared to be mainly structured by local environmental properties. However, signatures of neutral processes driving local bacterioplankton community assembly were also recorded.
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Population biology of Ross's geese at McConnell River, NunavutCaswell, Jason Hughes 25 March 2009
Understanding what influences movement patterns in animals is important to the understanding of colonization, range expansion, and sourcesink dynamics. Rosss geese (Chen rossii) have been expanding their nesting range eastward, and, as recently as 1994, have been nesting in large numbers in such newly colonized areas. I sampled nests at the McConnell River Migratory Bird Sanctuary (MCR), the largest known Rosss goose nesting colony outside the Queen Maud Gulf Migratory Bird Sanctuary (QMG) to estimate its nesting population size. To understand whether immigration by Rosss geese to a new colony located outside traditional nesting areas has an adaptive basis, I compared nutritional, nesting, and survival metrics between geese nesting at the MCR and those nesting at Karrak Lake (KAR) in QMG. I hypothesized that because of longer nesting season, Rosss geese at MCR would have more fat and protein reserves, larger clutch sizes, and greater nest success than those at KAR. Additionally, I hypothesized that population change at MCR was due largely to in situ recruitment. To better understand factors motivating dispersal, movement by Rosss geese between nesting attempts at MCR was measured between years. I hypothesized that dispersal distance of nesting females between years t, and t+1 was a function of both a females own reproductive success as well as that of her neighbours.<p>
In 1997 over 23,000 Rosss geese were counted at MCR. By 2007, population estimates (± SE) had increased to 81,408 (±12,367). Survival of both juvenile and adult geese marked at MCR was similar to those nesting at KAR; however, recovery rate estimates were greater than those for KAR. On average, Rosss geese arrived and initiated nests at MCR seven days earlier than at KAR. Abdominal fat was lower when nest initiation date was later in both areas, but was generally greater in geese nesting at MCR. Similarly, there was more indexed protein in geese at MCR than those at KAR in 2 of 3 years. Nesting indices such as clutch size and nest success did not show a consistent area effect, which interacted with a year effect.<p>
Rosss geese at MCR did not appear to use individual or conspecific reproductive success when deciding if or how far to disperse between years, and temporary emigration rates also did not vary based on reproductive success the previous year. Instead, variables other than prior individual or neighbour nest success influenced Rosss goose nest site selection and colony fidelity. The number of Rosss geese nesting at MCR increased at an average rate of 11.4% per year from 20032007, despite no increase (0%) from 2006 to 2007. Vital rate information gathered during this time suggests that immigration may have contributed to this growth; however, with few assumptions it can be concluded that MCR is a sustainable population. As a result, studies of geese breeding at MCR provide evidence that arctic geese are capable of successfully colonizing nesting areas great distances beyond historic range.
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Role of landscape composition and geographical location on breeding philopatry in grassland passerines : a stable isotope approachBrewster, Katherine Rose 01 April 2009
Grassland bird populations in North America are in steady decline. Despite declining faster and more consistently than any other group of birds, grassland songbird populations are relatively understudied and little is known about factors driving breeding-site philopatry and dispersal. Landscape and habitat composition may influence fidelity of grassland songbirds to a breeding area. As predicted by the theory of the <i>Ideal Free Distribution</i>, high-quality sites are likely to have a higher percentage of return breeders than low-quality sites because higher quality sites should have more or better-quality resources birds need for improved fitness. Using stable hydrogen isotope (äD) analysis, I approximated minimum fidelity rates of two grassland songbirds to two landscape (grass- vs crop-dominated landscapes) and two habitat (native grass vs planted grass) types. I hypothesized that grassland songbirds would return more readily to higher quality sites. For Spragues Pipit (<i>Anthus spragueii</i>), a habitat specialist, this would mean returning more readily to native grass habitat in grass dominated landscapes. I expected no difference in return rate of Savannah Sparrow (<i>Passerculus sandwichensis</i>), a habitat generalist, to either habitat or landscape. However, I found that the proportion of non-returning breeders was not influenced by landscape or habitat for either species. Furthermore, I examined attributes (distance from capture point to nearest crop and to the nearest road, as well as the percentage of native grass, planted grass, water and woody vegetation within landscape and territory buffers around the capture point) of the landscape and territory of each individual to determine if specific landscape or territory characteristics influenced their return rate to a breeding area. Neither species showed an affinity or aversion to any of the landscape or territory characteristics considered.<p>
At a larger scale, geographical position within the breeding range may influence dispersal rates of migratory songbirds. Given that environmental factors often change in a clinal manner, central populations presumably experience the most favorable environmental conditions and peripheral populations the least favorable. Therefore, geographically peripheral locations likely occur in ecologically marginal or stressful conditions, resulting in higher dispersal rates of migratory birds. I examined the differences in dispersal rates of two grassland songbirds at two geographically distinct locations; one centrally located in the Spragues Pipit breeding range (Last Mountain Lake area, SK, Canada) and one at the periphery (Bowdoin National Wildlife Refuge, MT, USA). As expected, Spragues Pipits at the Bowdoin National Wildlife Refuge had a significantly larger dispersal rate than at the Last Mountain Lake area. Savannah Sparrow dispersal rates did not differ between locations at the more conservative outlier classification. These results provide some limited evidence that geographical position within the breeding range can influence dispersal rates.<p>
Using äD analysis, I found that local amount-weighted growing-season deuterium in precipitation (äDp) at locations within grassland ecosystems differed from those long-term (45+ year) models described by stable hydrogen isotope ratio basemaps, illustrated in Hobson and Wassenaar (1997), Meehan et al. (2004) and Bowen et al. (2005). Therefore, I describe how äDp values were corrected from the long-term isoscape value predicted by Bowen et al. (2005). This method of determining year-specific local weighted growing-season äDp is an improvement upon the currently used Bowen et al. (2005) isoscape that is based on long-term precipitation patterns. To improve assignment of individuals to origins based on their äDf values, future research should incorporate year-to-year variation by applying year-specific corrections to the Bowen et al. (2005) isoscape.<p>
More research is needed to determine the factors affecting the philopatry and dispersal of grassland songbirds in order to conserve them.
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The role of dispersal in population dynamics of breeding Ross's geeseDrake, Kiel L. 27 April 2006
Spatial variation in density of organisms can lead to challenges in estimation of population size. Associated vital rates responsible for this variation also may vary geographically and in response to local ecological conditions, with the result that subunits of a metapopulation may have different trajectories. Both temporal and spatial variation in population size occurs not only as a result of additions through birth and deletions through death, but also from gains and losses arising from immigration and emigration, respectively. Although virtually all organisms have evolved mechanisms for dispersal, the role of movement in population dynamics has received far less attention than have contributions from recruitment and losses to mortality. I used mark-recapture techniques to make inferences about the role of movement in local population dynamics of Rosss Goose (Chen rossii) colonies by estimating rates of movement between breeding subpopulations in the Queen Maud Gulf metapopulation. I also assessed decision-based philopatry (i.e., the role of previous nesting outcome; sensu Hoover 2003) and a potential cost of reproduction to female geese through experimental manipulation of nesting success. <p>Previous nest fate influenced intra-colony dispersal as failed nesters moved further between consecutive nest sites, but inter-colony movement was not affected by previous nest fate. Regardless of previous nest fate, Rosss Geese did not exhibit philopatry to nest sites, or to breeding territories, suggesting that philopatry occurs at a larger spatial scale. Breeding success accounted for a detectable, but only small amount of variation (<11%) in dispersal distance within colonies. I suggest that temporal variation in habitat availability favors flexibility in settling patterns by geese in a changing matrix of habitat availability, governed largely by receding snow cover. Such flexibility is necessary for nesting as early as possible, because recruitment is strongly linked to timing of breeding by arctic-nesting geese. Colonial philopatry may be important not only for favorable nesting but also for access to high-quality feeding areas adjacent to colonies. Such feeding areas represent a predictable food resource important not only to growing goslings, but also adult survival regardless of the outcome of their breeding attempt. <p>I concluded from experimental manipulation that successful reproduction was encumbered with a cost to survival of females. I argue that such a cost of breeding is more likely to be incurred when climatic conditions during incubation are harsh, and when the breeding population is larger. <p>I did not find evidence for geographic variation in survival, but rates of philopatry varied markedly among colonies. The substantial exchange of females among breeding colonies (1) underscores the potential for dispersal to alter breeding distribution, (2) demonstrates that the influence of immigration on colony-specific rates of population growth was nontrivial, and (3) provides behavioral evidence for extensive gene flow resulting from female dispersal. Estimates of emigration and survival from my studies were used in combination with those for fecundity parameters and colony-specific population growth rates (lambda) to interpolate the role of immigration from a simple balance equation. During years for which rates of movement were estimated, immigration constituted 9-20% of lambda at the Karrak Lake colony, suggesting that movement was an important contribution to population growth.
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Mechanisms for Range Size and Distribution Variation in the Polyploid Complex Black-fruited Hawthorn (Crataegus series Douglasianae): Biogeographic Implications for the Maintenance of Cytotype DiversityCoughlan, Jennifer 21 November 2012 (has links)
Polyploidization is exceptionally cosmopolitan in plants. One common observation is that polyploids inhabit larger geographic distributions than their diploid progenitors. Differences in distribution between cytotypes are largely attributed to differences in mating system and ecological breadth among cytotypes. In Crataegus series Douglasianae, allopolyploids have larger ranges than their diploid progenitors. Range size increase is coupled with a shift to predominant asexuality in polyploids. This thesis explores 2 additional hypotheses that may contribute to differences in distribution among cytotypes: ecological breadth and dispersal ability. We find evidence that tetraploid C. douglasii occurs in a wider range of habits and has a greater dispersal ability than diploid C. suksdorfii. Overall, we suggest that differences in mating system, ecological breadth, and dispersal ability have contributed individually and collaboratively to differences in distribution among cytotypes of Crataegus series Douglasianae. Large ranges in polyploids may help maintain cytotype diversity by providing buffering capacity against demographic stochasticity.
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Mechanisms for Range Size and Distribution Variation in the Polyploid Complex Black-fruited Hawthorn (Crataegus series Douglasianae): Biogeographic Implications for the Maintenance of Cytotype DiversityCoughlan, Jennifer 21 November 2012 (has links)
Polyploidization is exceptionally cosmopolitan in plants. One common observation is that polyploids inhabit larger geographic distributions than their diploid progenitors. Differences in distribution between cytotypes are largely attributed to differences in mating system and ecological breadth among cytotypes. In Crataegus series Douglasianae, allopolyploids have larger ranges than their diploid progenitors. Range size increase is coupled with a shift to predominant asexuality in polyploids. This thesis explores 2 additional hypotheses that may contribute to differences in distribution among cytotypes: ecological breadth and dispersal ability. We find evidence that tetraploid C. douglasii occurs in a wider range of habits and has a greater dispersal ability than diploid C. suksdorfii. Overall, we suggest that differences in mating system, ecological breadth, and dispersal ability have contributed individually and collaboratively to differences in distribution among cytotypes of Crataegus series Douglasianae. Large ranges in polyploids may help maintain cytotype diversity by providing buffering capacity against demographic stochasticity.
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Habitat Utilization of the Endemic Poison Dart Frog Excidobates mysteriosus in North-western PeruMonsalve Pasapera, Sandra January 2011 (has links)
The worldwide amphibian diversity is severely threatened, mainly due to deforestation. Lack of sufficient knowledge for species conservation is common. This is the first detailed study of the poison dart frog Excidobates mysteriosus including habitat requirements, occupancy patterns and behaviours. It is known only from one location in north-western Peru, living in Bromeliaceae plant species. The frogs and tadpoles were found in two unidentified Bromeliaceae species; Bromeliad Species 1 and Bromeliad Species 2. Bromeliad quality variables were evaluated for habitat requirements, behavioural recordings were performed ad libitum and catching-and-release with photographingof frogs for monitoring dispersals. Results show that for Bromeliad Species 1 significantly more frogs were present in bromeliads that were wider, received less sun exposure, had deeper water cavities and in bromeliads growing on lower altitudes. For Bromeliad Species 2 deeper water cavities had a significant effect on presence of frogs. In both bromeliad species higher presence of tadpoles were found in plants that were wider and had deeper water cavities. The density of bromeliads had no effect on frog or tadpole occupancy for neither bromeliad species. The dispersal, feeding and tadpole release behaviours are reported. Individual frogs were found to disperse 0-113m. The total number of encountered frogs was 1006 and 86 tadpoles, most of them found in three core areas. These areas should be targeted for conservation management and monitoring, diminishing the high deforestation pressure which saves old-growth forests and thereby as well the preferred wider bromeliads containing deeper water cavities and the biggest frog populations.
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The role of dispersal in population dynamics of breeding Ross's geeseDrake, Kiel L. 27 April 2006 (has links)
Spatial variation in density of organisms can lead to challenges in estimation of population size. Associated vital rates responsible for this variation also may vary geographically and in response to local ecological conditions, with the result that subunits of a metapopulation may have different trajectories. Both temporal and spatial variation in population size occurs not only as a result of additions through birth and deletions through death, but also from gains and losses arising from immigration and emigration, respectively. Although virtually all organisms have evolved mechanisms for dispersal, the role of movement in population dynamics has received far less attention than have contributions from recruitment and losses to mortality. I used mark-recapture techniques to make inferences about the role of movement in local population dynamics of Rosss Goose (Chen rossii) colonies by estimating rates of movement between breeding subpopulations in the Queen Maud Gulf metapopulation. I also assessed decision-based philopatry (i.e., the role of previous nesting outcome; sensu Hoover 2003) and a potential cost of reproduction to female geese through experimental manipulation of nesting success. <p>Previous nest fate influenced intra-colony dispersal as failed nesters moved further between consecutive nest sites, but inter-colony movement was not affected by previous nest fate. Regardless of previous nest fate, Rosss Geese did not exhibit philopatry to nest sites, or to breeding territories, suggesting that philopatry occurs at a larger spatial scale. Breeding success accounted for a detectable, but only small amount of variation (<11%) in dispersal distance within colonies. I suggest that temporal variation in habitat availability favors flexibility in settling patterns by geese in a changing matrix of habitat availability, governed largely by receding snow cover. Such flexibility is necessary for nesting as early as possible, because recruitment is strongly linked to timing of breeding by arctic-nesting geese. Colonial philopatry may be important not only for favorable nesting but also for access to high-quality feeding areas adjacent to colonies. Such feeding areas represent a predictable food resource important not only to growing goslings, but also adult survival regardless of the outcome of their breeding attempt. <p>I concluded from experimental manipulation that successful reproduction was encumbered with a cost to survival of females. I argue that such a cost of breeding is more likely to be incurred when climatic conditions during incubation are harsh, and when the breeding population is larger. <p>I did not find evidence for geographic variation in survival, but rates of philopatry varied markedly among colonies. The substantial exchange of females among breeding colonies (1) underscores the potential for dispersal to alter breeding distribution, (2) demonstrates that the influence of immigration on colony-specific rates of population growth was nontrivial, and (3) provides behavioral evidence for extensive gene flow resulting from female dispersal. Estimates of emigration and survival from my studies were used in combination with those for fecundity parameters and colony-specific population growth rates (lambda) to interpolate the role of immigration from a simple balance equation. During years for which rates of movement were estimated, immigration constituted 9-20% of lambda at the Karrak Lake colony, suggesting that movement was an important contribution to population growth.
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Population biology of Ross's geese at McConnell River, NunavutCaswell, Jason Hughes 25 March 2009 (has links)
Understanding what influences movement patterns in animals is important to the understanding of colonization, range expansion, and sourcesink dynamics. Rosss geese (Chen rossii) have been expanding their nesting range eastward, and, as recently as 1994, have been nesting in large numbers in such newly colonized areas. I sampled nests at the McConnell River Migratory Bird Sanctuary (MCR), the largest known Rosss goose nesting colony outside the Queen Maud Gulf Migratory Bird Sanctuary (QMG) to estimate its nesting population size. To understand whether immigration by Rosss geese to a new colony located outside traditional nesting areas has an adaptive basis, I compared nutritional, nesting, and survival metrics between geese nesting at the MCR and those nesting at Karrak Lake (KAR) in QMG. I hypothesized that because of longer nesting season, Rosss geese at MCR would have more fat and protein reserves, larger clutch sizes, and greater nest success than those at KAR. Additionally, I hypothesized that population change at MCR was due largely to in situ recruitment. To better understand factors motivating dispersal, movement by Rosss geese between nesting attempts at MCR was measured between years. I hypothesized that dispersal distance of nesting females between years t, and t+1 was a function of both a females own reproductive success as well as that of her neighbours.<p>
In 1997 over 23,000 Rosss geese were counted at MCR. By 2007, population estimates (± SE) had increased to 81,408 (±12,367). Survival of both juvenile and adult geese marked at MCR was similar to those nesting at KAR; however, recovery rate estimates were greater than those for KAR. On average, Rosss geese arrived and initiated nests at MCR seven days earlier than at KAR. Abdominal fat was lower when nest initiation date was later in both areas, but was generally greater in geese nesting at MCR. Similarly, there was more indexed protein in geese at MCR than those at KAR in 2 of 3 years. Nesting indices such as clutch size and nest success did not show a consistent area effect, which interacted with a year effect.<p>
Rosss geese at MCR did not appear to use individual or conspecific reproductive success when deciding if or how far to disperse between years, and temporary emigration rates also did not vary based on reproductive success the previous year. Instead, variables other than prior individual or neighbour nest success influenced Rosss goose nest site selection and colony fidelity. The number of Rosss geese nesting at MCR increased at an average rate of 11.4% per year from 20032007, despite no increase (0%) from 2006 to 2007. Vital rate information gathered during this time suggests that immigration may have contributed to this growth; however, with few assumptions it can be concluded that MCR is a sustainable population. As a result, studies of geese breeding at MCR provide evidence that arctic geese are capable of successfully colonizing nesting areas great distances beyond historic range.
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280 |
Role of landscape composition and geographical location on breeding philopatry in grassland passerines : a stable isotope approachBrewster, Katherine Rose 01 April 2009 (has links)
Grassland bird populations in North America are in steady decline. Despite declining faster and more consistently than any other group of birds, grassland songbird populations are relatively understudied and little is known about factors driving breeding-site philopatry and dispersal. Landscape and habitat composition may influence fidelity of grassland songbirds to a breeding area. As predicted by the theory of the <i>Ideal Free Distribution</i>, high-quality sites are likely to have a higher percentage of return breeders than low-quality sites because higher quality sites should have more or better-quality resources birds need for improved fitness. Using stable hydrogen isotope (äD) analysis, I approximated minimum fidelity rates of two grassland songbirds to two landscape (grass- vs crop-dominated landscapes) and two habitat (native grass vs planted grass) types. I hypothesized that grassland songbirds would return more readily to higher quality sites. For Spragues Pipit (<i>Anthus spragueii</i>), a habitat specialist, this would mean returning more readily to native grass habitat in grass dominated landscapes. I expected no difference in return rate of Savannah Sparrow (<i>Passerculus sandwichensis</i>), a habitat generalist, to either habitat or landscape. However, I found that the proportion of non-returning breeders was not influenced by landscape or habitat for either species. Furthermore, I examined attributes (distance from capture point to nearest crop and to the nearest road, as well as the percentage of native grass, planted grass, water and woody vegetation within landscape and territory buffers around the capture point) of the landscape and territory of each individual to determine if specific landscape or territory characteristics influenced their return rate to a breeding area. Neither species showed an affinity or aversion to any of the landscape or territory characteristics considered.<p>
At a larger scale, geographical position within the breeding range may influence dispersal rates of migratory songbirds. Given that environmental factors often change in a clinal manner, central populations presumably experience the most favorable environmental conditions and peripheral populations the least favorable. Therefore, geographically peripheral locations likely occur in ecologically marginal or stressful conditions, resulting in higher dispersal rates of migratory birds. I examined the differences in dispersal rates of two grassland songbirds at two geographically distinct locations; one centrally located in the Spragues Pipit breeding range (Last Mountain Lake area, SK, Canada) and one at the periphery (Bowdoin National Wildlife Refuge, MT, USA). As expected, Spragues Pipits at the Bowdoin National Wildlife Refuge had a significantly larger dispersal rate than at the Last Mountain Lake area. Savannah Sparrow dispersal rates did not differ between locations at the more conservative outlier classification. These results provide some limited evidence that geographical position within the breeding range can influence dispersal rates.<p>
Using äD analysis, I found that local amount-weighted growing-season deuterium in precipitation (äDp) at locations within grassland ecosystems differed from those long-term (45+ year) models described by stable hydrogen isotope ratio basemaps, illustrated in Hobson and Wassenaar (1997), Meehan et al. (2004) and Bowen et al. (2005). Therefore, I describe how äDp values were corrected from the long-term isoscape value predicted by Bowen et al. (2005). This method of determining year-specific local weighted growing-season äDp is an improvement upon the currently used Bowen et al. (2005) isoscape that is based on long-term precipitation patterns. To improve assignment of individuals to origins based on their äDf values, future research should incorporate year-to-year variation by applying year-specific corrections to the Bowen et al. (2005) isoscape.<p>
More research is needed to determine the factors affecting the philopatry and dispersal of grassland songbirds in order to conserve them.
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