The interactions between the immune and nervous systems play an important role in immune and inflammatory conditions. Substance P (SP), the unidecapeptide RPKPQQFFGLM-NH2, is known to upregulate the production of pro-inflammatory cytokines such as tumor necrosis factor (TNF)-α. We report here that 5 (Acetylamino) 4 oxo-6-phenyl-2-hexenoic acid methyl ester (AOPHA-Me) and 4 phenyl 3 butenoic acid (PBA), two anti-inflammatory compounds developed in our laboratory, reduce SP stimulated TNF-α expression in RAW 264.7 macrophages. We also show that AOPHA Me and PBA both inhibit SP stimulated phosphorylation of JNK and p38 MAPK. Furthermore, molecular modeling studies indicate that both AOPHA Me and PBA dock at the ATP binding site of apoptosis signal regulating kinase 1 (ASK1) with predicted docking energies of -7.0 kcal/mol and 5.9 kcal/mol, respectively; this binding overlaps with that of staurosporine, a known inhibitor of ASK1. Taken together, these findings support the conclusion that AOPHA Me and PBA inhibition of TNF-α expression in SP-stimulated RAW 264.7 macrophages is a consequence of the inhibition JNK and p38 MAPK phosphorylation. We have previously shown that AOPHA-Me and PBA inhibit the amidative bioactivation of SP, which also would be expected to decrease formation of pro-inflammatory cytokines. It is conceivable that this dual action of inhibiting amidation and MAPK phosphorylation may be of some advantage in enhancing the anti-inflammatory activity of a therapeutic molecule. We also encapsulated AOPHA-Me separately in polyketal and poly(lactic co glycolic acid) microparticles. The in-vitro release profiles of AOPHA-Me from these particles were characterized. We have also shown that AOPHA-Me, when encapsulated in PCADK microparticles, is an effective treatment for edema induced by adjuvant arthritis in rats. In separate work, it was determined that myo inositol 1,2,3,4,5,6 hexakisphosphate is an inhibitor to early-stage Loblolly pine somatic embryo growth. In addition, it was determined that muco inositol 1,2,3,4,5,6 hexakisphosphate is not an inhibitor to early-stage Loblolly pine somatic embryo growth. These experiments demonstrate the stereochemical dependence of myo inositol 1,2,3,4,5,6 hexakisphosphates inhibitory activity.

Conifer species are subjected to major time constraints in tree improvement because of their long regeneration cycle and large sizes. However, integration of developing biotechnologies could significantly reduce this time limitation in tree breeding programs. In this regard, somatic embryogenesis (SE) offers a great potential in commercially important Turkish red pine (Pinus brutia TEN.) for rapid production of larger number of clones as well as capture of greater genetic gains. In this study, seven collections were done to sample precotyledonar zygotic embryos for induction of embryogenic tissue (ET) from 15 clones located in Antalya. Afterwards, abscisic acid, carbohydrates, polyethylene glycol (PEG), and gellan gum were tested to obtain mature somatic embryos in maturation experiments. Analyses of variance showed a significant variation among collection dates (43.1% of total variance) and clones studied (18.8% of total variance) for induction of ETs. Overall initiation frequency of ET in this study was 11.6% with clonal range of 4.7 &amp / #8211 / 24.1%. Of those tested maturation treatments, 80&amp / #956 / M ABA, sucrose and maltose at 3 and 6%, 3.75% PEG combined with 1% gellan gum were found to be suitable for maturation of somatic embryos in Turkish red pine. Sixty nine somatic embryos were obtained from Clone 22, which was one of tested clones. Induction frequencies could be further improved by using different basal media and/or manipulating media components, such as plant growth regulators. For proper maturation of somatic embryos, embryogenic lines need to be screened to find suitable lines, which are developmentally responsive to ABA treatment.

Coconut (Cocos nucifera L.) is native to the regions between 20oN and 20oS of the Equator, where it plays a significant socioeconomic role in the local communities. There it is referred to as ’The Tree of Life’, a eulogistic epithet describing its versatile use - more than 100 edible and non-edible products can be produced from it. Therefore the coconut palm is grown in about 90 tropical countries on more than 10 millions ha of land (Hamon et al., 1999). Although coconut has a high local socioeconomic reputation, its production is experiencing many problems and consequently the area planted with this crop is declining. The conventional breeding approach using seed to replant land is very expensive due to the low production of seed for planting, and even when elite germplasm is available it takes decades to multiply up enough planting material for new areas (Adkins et al., 1999). Hence over the past 40 years research has been directed towards developing a new technique for the micropropagation of coconut using somatic embryogenic approach. Throughout this time however one conclusion is repeatedly made – coconut is very recalcitrant to somatic embryogenesis. And although the many obstacles to this are slowly being reduced, in order to successfully micropropagate coconut on a large scale bottlenecks in the protocol still exist, and those include inconsistency of the embryogenic response by explanted tissues, poor somatic embryo maturation and germination, low regeneration rate of the new plantlets and long time required to produce plants (1.5 years) (Samosir et al., 1998). These bottlenecks and other problems were researched in the present study with the aim of trying to speed up the efficiency of coconut somatic embryogenesis process. Hence this thesis had the objectives to identify a starting protocol for coconut somatic embryogenesis; to select an appropriate for aim that explant; to optimize the production of embryogenic callus; to increase the rate of initiating coconut somatic embryos; to improve the maturation of somatic embryos and their germination efficiency; and to optimize the regeneration rate of the new plantlets. In order to identify a starting protocol, preliminary work was conducted, where existing protocols for coconut somatic embryogenesis were compared in their efficiency to induce somatic embryos. The protocol that stood out as the best in producing most embryogenic callus and subsequently embryos, as well as having the least dead (in culture) explants, was that of Nikmatullah (2001). Therefore the latter was chosen to be used as a starting protocol for this study. New sources of explants were investigated during the current work as well, using tissues from different parts of in vitro derived 8 months old coconut plantlets. Those however have shown to be unsuitable for somatic embryogenesis, since only non-embryogenic callus was developed by some of the inoculated tissues. The immature inflorescence explants were superior in producing embryogenic callus and somatic embryos; therefore they were selected as the preferred explant source to use in the next steps of the current study. Optimizing the production of embryogenic callus was the first issue to address during the core work of this project. As a result of that the culture conditions were considerably improved by using vessels with larger headspace-medium ratio (3:1), as well as by selecting younger immature inflorescences and transversely segmenting the top half of the inflorescence spikes into smaller size (1 mm) sections. Further improvement was possible by studying the make up of the callus growth media. Amongst the administered for that purpose substances the applied together polyamines spermine (0.10 µM) and putrescine (7.5 mM) have proven to play a notably positive role in the induction of callus from coconut immature inflorescence explants. Thidiazuron (TDZ, 10 µM) too has shown a potential to improve the efficiency of the initial stage of coconut somatic embryogenesis, but only when applied in conjunction with other cytokinins (eg. BAP and 2iP). Smoke-saturated-water (SSW, 10 %) could only slightly diminish the amount of necrotising cultured explants, and high 2,4-D concentrations could not support the induction of callus from immature coconut inflorescences. Collectively taken, as a result of this current study the production of callus was improved by 300 %. The rate of coconut somatic embryos formation was as well significantly increased (over 300 %), by the simultaneous application of suspension culture step, spermine (0.01 µM), SSW (10 %) and high auxin concentration (500 µM). Nevertheless the presence of TDZ and other cytokinins in the medium, as well as the absence of activated charcoal, were found to be unable to positively influence the somatic embryogenesis process. Despite the considerable improvements made in the efficiency of inducing callus and initiating embryos, the poor maturation and germination (eg. 5 %, Verdeil et. al., 1999) of somatic embryos still remained a bottleneck to the whole somatic embryogenesis procedure. Therefore further work was conducted in that direction and discovered that embryo maturation and germination rate can be elevated to 55 % by administering ancymidol (30 µM) to the somatic embryo maturation medium. This plant retardant has exhibited here three potential modes of action towards the cultured coconut somatic embryos: a) as a promoter of somatic embryo maturation and germination; b) as a preventor of pre-germination death of the somatic embryos; and c) as a preserver of non-germinating somatic embryos, that still can possess the potential to germinate in the future. The work during the next step of the process – regeneration of the new plantlets – has shown that the omission of plant growth regulators from the media was crucial for the development of germinated embryos into new plantlets, where otherwise no plant regeneration occurred at all. The achieved here plantlet regeneration rate in the PGR-free medim was 56 %, which is higher than the previously reported 20 % regeneration rate (Verdeil et al., 1994) for coconut plantlets produced from immature inflorescences explants. As a result of this current work a new method was developed for somatic embryogenesis of coconut from immature inflorescences explants (Fig. 9.2). The overall efficiency of this protocol is over three times higher than that of the starting protocol (Nikmatullah, 2001) selected during the preliminary work. Furthermore, when using this new method the entire duration for regenerating clonal coconut plantlets (up to the stage of first root and shoot emerging) takes up to 8 months, which is the shortest reported time for producing coconut plantlets via somatic embryogenesis (eg. 36 months from inflorescences explants (Verdeil et. al., 1999) and 18 months from sliced zygotic explants (Samosir, 1999, Fig. 9.2), presenting an additional valuable advantage of this newly developed method, from the perspective of the potential to micropropagate coconut on a commercial scale.

Coconut (Cocos nucifera L.) is native to the regions between 20oN and 20oS of the Equator, where it plays a significant socioeconomic role in the local communities. There it is referred to as ’The Tree of Life’, a eulogistic epithet describing its versatile use - more than 100 edible and non-edible products can be produced from it. Therefore the coconut palm is grown in about 90 tropical countries on more than 10 millions ha of land (Hamon et al., 1999). Although coconut has a high local socioeconomic reputation, its production is experiencing many problems and consequently the area planted with this crop is declining. The conventional breeding approach using seed to replant land is very expensive due to the low production of seed for planting, and even when elite germplasm is available it takes decades to multiply up enough planting material for new areas (Adkins et al., 1999). Hence over the past 40 years research has been directed towards developing a new technique for the micropropagation of coconut using somatic embryogenic approach. Throughout this time however one conclusion is repeatedly made – coconut is very recalcitrant to somatic embryogenesis. And although the many obstacles to this are slowly being reduced, in order to successfully micropropagate coconut on a large scale bottlenecks in the protocol still exist, and those include inconsistency of the embryogenic response by explanted tissues, poor somatic embryo maturation and germination, low regeneration rate of the new plantlets and long time required to produce plants (1.5 years) (Samosir et al., 1998). These bottlenecks and other problems were researched in the present study with the aim of trying to speed up the efficiency of coconut somatic embryogenesis process. Hence this thesis had the objectives to identify a starting protocol for coconut somatic embryogenesis; to select an appropriate for aim that explant; to optimize the production of embryogenic callus; to increase the rate of initiating coconut somatic embryos; to improve the maturation of somatic embryos and their germination efficiency; and to optimize the regeneration rate of the new plantlets. In order to identify a starting protocol, preliminary work was conducted, where existing protocols for coconut somatic embryogenesis were compared in their efficiency to induce somatic embryos. The protocol that stood out as the best in producing most embryogenic callus and subsequently embryos, as well as having the least dead (in culture) explants, was that of Nikmatullah (2001). Therefore the latter was chosen to be used as a starting protocol for this study. New sources of explants were investigated during the current work as well, using tissues from different parts of in vitro derived 8 months old coconut plantlets. Those however have shown to be unsuitable for somatic embryogenesis, since only non-embryogenic callus was developed by some of the inoculated tissues. The immature inflorescence explants were superior in producing embryogenic callus and somatic embryos; therefore they were selected as the preferred explant source to use in the next steps of the current study. Optimizing the production of embryogenic callus was the first issue to address during the core work of this project. As a result of that the culture conditions were considerably improved by using vessels with larger headspace-medium ratio (3:1), as well as by selecting younger immature inflorescences and transversely segmenting the top half of the inflorescence spikes into smaller size (1 mm) sections. Further improvement was possible by studying the make up of the callus growth media. Amongst the administered for that purpose substances the applied together polyamines spermine (0.10 µM) and putrescine (7.5 mM) have proven to play a notably positive role in the induction of callus from coconut immature inflorescence explants. Thidiazuron (TDZ, 10 µM) too has shown a potential to improve the efficiency of the initial stage of coconut somatic embryogenesis, but only when applied in conjunction with other cytokinins (eg. BAP and 2iP). Smoke-saturated-water (SSW, 10 %) could only slightly diminish the amount of necrotising cultured explants, and high 2,4-D concentrations could not support the induction of callus from immature coconut inflorescences. Collectively taken, as a result of this current study the production of callus was improved by 300 %. The rate of coconut somatic embryos formation was as well significantly increased (over 300 %), by the simultaneous application of suspension culture step, spermine (0.01 µM), SSW (10 %) and high auxin concentration (500 µM). Nevertheless the presence of TDZ and other cytokinins in the medium, as well as the absence of activated charcoal, were found to be unable to positively influence the somatic embryogenesis process. Despite the considerable improvements made in the efficiency of inducing callus and initiating embryos, the poor maturation and germination (eg. 5 %, Verdeil et. al., 1999) of somatic embryos still remained a bottleneck to the whole somatic embryogenesis procedure. Therefore further work was conducted in that direction and discovered that embryo maturation and germination rate can be elevated to 55 % by administering ancymidol (30 µM) to the somatic embryo maturation medium. This plant retardant has exhibited here three potential modes of action towards the cultured coconut somatic embryos: a) as a promoter of somatic embryo maturation and germination; b) as a preventor of pre-germination death of the somatic embryos; and c) as a preserver of non-germinating somatic embryos, that still can possess the potential to germinate in the future. The work during the next step of the process – regeneration of the new plantlets – has shown that the omission of plant growth regulators from the media was crucial for the development of germinated embryos into new plantlets, where otherwise no plant regeneration occurred at all. The achieved here plantlet regeneration rate in the PGR-free medim was 56 %, which is higher than the previously reported 20 % regeneration rate (Verdeil et al., 1994) for coconut plantlets produced from immature inflorescences explants. As a result of this current work a new method was developed for somatic embryogenesis of coconut from immature inflorescences explants (Fig. 9.2). The overall efficiency of this protocol is over three times higher than that of the starting protocol (Nikmatullah, 2001) selected during the preliminary work. Furthermore, when using this new method the entire duration for regenerating clonal coconut plantlets (up to the stage of first root and shoot emerging) takes up to 8 months, which is the shortest reported time for producing coconut plantlets via somatic embryogenesis (eg. 36 months from inflorescences explants (Verdeil et. al., 1999) and 18 months from sliced zygotic explants (Samosir, 1999, Fig. 9.2), presenting an additional valuable advantage of this newly developed method, from the perspective of the potential to micropropagate coconut on a commercial scale.

Diss. (sammanfattning) Uppsala : Sveriges lantbruksuniv., 2003. / Härtill 5 uppsatser.

Diss. (sammanfattning) Uppsala : Sveriges lantbruksuniv., 2003. / Härtill 4 uppsatser.

Diss. (sammanfattning) Uppsala : Sveriges lantbruksuniv. / Härtill 4 uppsatser.

Thesis (MSc)--Stellenbosch University, 2015. / ENGLISH ABSTRACT: Late Embryogenesis Abundant (LEA) genes have been irrefutably linked to the osmotic stress response since their initial discovery in maturing cotton seeds. They have since been reported from a multitude of other organism where their occurrence is often associated with general responses to abiotic stress. Many studies have been conducted using LEA genes in over expression strategies to improve abiotic stress resistance. Of the known classes of LEAs, the group 1 LEAs have been widely reported, in plants, to only occur in seeds during late stages of development. Their expression coincides with the seeds acquisition of desiccation tolerance. In this thesis we present a group 1 LEA isolated from the desiccated vegetative tissues (leaves) of the resurrection plant Xerophyta humilis. Using E.coli and Arabidopsis we attempted to use XhLEA to improve salt and water deficit stress-responses, respectively. To this end we conducted soil-drought trials on two independent transgenic Arabidopsis lines expressing XhLEA under a drought inducible-promoter and monitored their responses as compared to untransformed WT (Col-0 ) controls. Solid substrate E.coli growth assays and liquid media growth curves under both stress and unstressed conditions were conducted. We found no obvious beneficial effect through the expression of XhLEA in either of the organisms. / AFRIKAANSE OPSOMMING: Geen opsomming beskikbaar

Transgenesis of silkworms has great potential for the development of silk with new properties as well as for the preparation of recombinant proteins for the use in biomedicine. Zabelina et al. (2015a) showed that transgenesis of parthenogenetic silkworms facilitates the selection and maintenance of transgenic homozygotes with stabile transgene insertions. However, the efficiency of transgenesis was less than 2 % compared to 60 % in the standard, non-parthenogenetic silkworms. The purpose of the present research was to explore the cause of this difference. Since transgenesis is normally performed at 25 °C but in the parthenogenetic silkworms at 15 °C (3 days incubation at this temperature is part of the protocol for the induction of parthenogenetic development), we assumed that the eggs incubated at 15 °C might have been injected with the DNA construct at unsuitable time. The work was therefore focused on the rate of embryogenesis at 15 °C in the eggs treated in different ways. Intensive cleavage of the control eggs (strain K23) was observed at 12 h after oviposition at 25 °C and between 24 and 36 h at 15 °C. The transgenesis of parthenogenetic silkworms is also complicated by the embryonic diapause. In the current work, diapause was suppressed by implanting PK1 ovaries into the non-parthenogenetic male hosts K23. Parthenogenetic development was activated by the heat shock in the chorionated eggs dissected from the implants. No cleavage was detected at 12 h after the acti-vation and nearly complete blastoderm was found at 48 h. In respect to the course of cleavage at 15 °C, transgene injection 24 h after the activating heat shock can be recommended. The eggs from endogenous ovaries of the K23 females, which also contained the implants of the PK1 ovaries, acquired partial capacity of parthenogenesis. Low rate of embryogenesis was also found in the transgenic clone VTG1. Current results suggest that more research is needed to understand and possibly explore differences in the rate of silkworms exposed to different treatments.

O carrapato Rhipicephalus (Boophilus) microplus é responsável por perdas econômicas substanciais na bovinocultura, acarretando o uso intensivo de acaricidas. Problemas com os resíduos químicos presentes na carne e no leite, o custo dos acaricidas e a seleção de populações de carrapato resistentes, têm estimulado o desenvolvimento de métodos de controle alternativos não-químicos. Muito esforço tem sido despendido para o desenvolvimento de uma vacina contra o carrapato, no entanto, seu desenvolvimento depende da identificação de moléculas e caracterização de seus papéis na fisiologia do carrapato. Nesse sentido, entender melhor os processos envolvidos no desenvolvimento embrionário pode ajudar na identificação de alvos para o controle desse ectoparasita. Foi sugerida previamente a participação da Tick Heme-binding Aspartic Proteinase (THAP), uma aspártico-endopeptidase dos ovos do carrapato, na degradação da vitelina. Neste trabalho, nós avaliamos a função fisiológica e as características bioquímicas adicionais dessa proteína. Para identificar os sítios e o perfil de transcrição do gene da THAP, o RNA total foi extraído de intestino, ovário e corpo gorduroso de fêmeas parcialmente e completamente ingurgitadas e de ovos, e analisado por PCR quantitativo. Esta análise revelou que o gene da THAP é transcrito nos três tecidos, porém maior quantidade de mRNA foi detectada no corpo gorduroso e intestino de fêmeas completamente ingurgitadas, onde o processo de vitelogênese já foi iniciado. Nos ovos, a transcrição do gene da THAP não foi detectada. Para investigar a presença da proteína nos tecidos e ovos foi realizado um westen-blot com soro anti-THAP, que revelou a presença, em pequena quantidade, da proteína na hemolinfa, no intestino e no corpo gorduroso. Maior concentração de proteína foi detectada no ovário de fêmeas completamente ingurgitadas e nos ovos durante todo o desenvolvimento embrionário. Também foi observado que a THAP é sintetizada na forma de pró-endopeptidase e depois do início da embriogênese é convertida à forma ativa por autoproteólise. Uma proteína recombinante (rTHAP) foi produzida pela clonagem da região codificadora no vetor de expressão pET43a e expressão em Escherichia coli. Depois da purificação, a rTHAP apresentou atividade enzimática sobre substrato sintético fluorogênico, sendo especificamente inibida por pepstatina A. Para investigar sua participação na degradação de vitelina (VT), VT purificadas de ovos coletados 1, 7 e 12 dias após a postura foram incubadas com a rTHAP em diferentes pH (3,5; 4,0; 4,5; e 5,0). A análise por SDS-PAGE mostrou que a rTHAP é capaz de hidrolisar VT purificada de ovos coletados 7 dias após a postura em pH 3,5 a 37 ºC. Esta atividade é sensível a heme e inibida por pepstatina A. VT purificadas de ovos coletados 1 e 12 dias após a postura não foram hidrolisadas e em outros pH a atividade da rTHAP não foi eficiente. Nossos resultados sugerem que a THAP é sintetizada principalmente em tecidos extra-ovarianos, estocada nos ovários e incorporada nos oócitos como pró-endopeptidase. Durante a embriogênese, a THAP é ativada a enzima na forma madura desenvolvendo papel no processamento da vitelina do carrapato. / Rhipicephalus (Boophilus) microplus is a one-host tick that causes losses to bovine herds, leading intensive use of chemical acaricides. Problems of chemical residues in meat and milk, costs of acaricides, and development of resistance by ticks, have long been recognized and have helped to stimulate interest in tick control by immunological methods. Major efforts have been made to develop vaccines against tick; however, its development still depends on the identification of tick molecules and characterization of their roles in arthropod physiology. In this sense, to understand the processes involved in embryonic development can help in the identification of additional targets to control this ectoparasite. Previously, an aspartic endopeptidase from tick eggs, named THAP (Tick Heme-binding Aspartic Proteinase), was suggested to be involved in vitellin degradation. In this work, we have investigated the physiological role and additional chemical features of this protein. To identify the site and profiles of the THAP transcription, total RNA extracted from midgut, ovary and fat body from partially and fully engorged females and from eggs was analyzed by qRT-PCR. This analysis showed that THAP mRNA was transcripted in these three tissues. However, highest levels of transcriptions were found in fat body and midgut of fully engorged vitellogenic females. In eggs, THAP mRNA transcription was not detected. In order to investigate the presence of THAP protein in the tissues and eggs, an immunoblot analysis was conducted with an anti-nTHAP serum. The THAP protein was detected in the haemolymph, midgut and fat body and, in higher quantity, in the ovary of fully engorged females, and it was present throughout embryo development. The protein is synthesized as a higher molecular mass form (pro-endopeptidase) and after the onset of embryogenesis THAP is converted into an active form by autocatalysis. A recombinant THAP (rTHAP) was produced through cloning in pET43a vector and expression in Escherichia coli. After the purification the rTHAP was active upon fluorogenic substrate in a reaction specifically inhibit by pepstatin A. To investigate rTHAP vitellin-degradation activity, vitellin (VT) purified from 1-, 7- and 12-day-old eggs were incubated with rTHAP in a range of pHs (3.5, 4.0, 4.5 and 5.0). SDS-PAGE analysis showed that rTHAP is able to hydrolyze VT from 7-day-old eggs in pH 3.5 at 37ºC in a reaction that is heme-sensitive and inhibited by pepstatin A. Vitellins from eggs collected on the 1st and 12th days after oviposition were not hydrolyzed and in other pHs rTHAP activity was not efficient. These results suggest that THAP is synthesized in ovary and extra-ovarian site, stocked in ovary and incorporated by vitellogenic oocytes with a pro-endopeptidase. During embryogenesis, THAP was actived to the mature enzyme and play a role in tick vitellin processing.