Cette thèse porte sur l'influence de la couche limite convective et nuageuse sur la réactivité chimique en Afrique de l'Ouest. Pour répondre à cette question, des simulations à haute résolution (50m) sont réalisées sur le modèle atmosphérique Méso-NH couplé à un mécanisme chimique détaillé représentant la chimie gazeuse et aqueuse. Cette échelle spatiale permet de représenter explicitement les caractéristiques spatiales et temporelles des structures turbulentes. Les thermiques en couche limite sont identifiés à l'aide d'un échantillonnage conditionnel basé sur l'utilisation d'un traceur passif à décroissance radioactive. L'impact du transport turbulent sur la redistribution d'espèces chimiques dépend du temps de vie chimique de ces espèces. La ségrégation spatiale créée au sein de la couche limite augmente ou réduit les taux de réaction moyens entre composés. La campagne de terrain AMMA, et plus récemment DACCIWA, sont utilisées pour définir des forçages dynamiques et chimiques pour des environnements simulés. Le premier est représentatif d'un environnement biogénique dominé par des émissions naturelles de COV. Le second reproduit un environnement urbain modérément pollué typique du Golfe de Guinée (Cotonou au Bénin). Pour simplifier, l'analyse des simulations est limitée aux réactions chimiques entre OH et l'isoprène dans le cas biogénique, entre les aldéhydes C>2 et OH dans le cas urbain. L'influence de la couche limite convective est étudiée à l'échelle du thermique et du domaine. Cela permet une connexion avec les modèles à résolution plus lâche qui adoptent une hypothèse de mélange parfait et immédiat, négligeant de fait les variabilités spatiales de composés chimiques au sein d'une maille. Les premiers résultats, basés sur la phase gazeuse uniquement, montrent que les nuages en couche limite convective affectent le transport vertical d'espèces chimiques. Les thermiques sont des zones de réactions privilégiées où la réactivité chimique est maximale. La plus grande intensité de ségrégation est calculée au sommet de la couche limite, toutefois de signes opposés entre les deux environnements. En environnement biogénique, le mélange non-homogène de l'isoprène et de OH dans cette zone induit une diminution maximale de 30% du taux de réaction moyen. Dans le cas urbain, la constante de réaction effective entre OH et les aldéhydes est supérieure de 16% à la constante moyenne. La réactivité de OH est supérieure de 15 à 40% dans les thermiques comparé au reste du domaine, dépendant de l'environnement chimique et de l'heure. Comme les thermiques occupent une faible portion du domaine, l'impact des structures turbulentes sur la réactivité totale de OH est une diminution de 9% pour le cas biogénique et une augmentation maximale de 5% dans le cas anthropique. Des simulations LES incluant la réactivité aqueuse révèlent une baisse importante des rapports de mélange de OH associée à la présence de nuages. / This thesis focuses on the influence of the convective and cloudy boundary layer on the chemical reactivity in West Africa. To answer this question, high resolution simulations (50m) are performed on the atmospheric model Meso-NH coupled to a detailed chemical scheme representing the gaseous and aqueous phases. This spatial scale allow to explicitly represent the spatial and temporal characteristics of turbulent structures. Thermals in the boundary layer are identified by a conditional sampling based on a radioactive-decay passive scalar. The turbulent transport influence on the redistribution of chemical species depends on the chemical lifetimes of these species. Spatial segregation is created within the convective boundary layer that increases or decreases the mean reaction rates between compounds. AMMA campaign field study, and more recently DACCIWA, are used to define dynamical and chemical forcing of two simulated environments. The first one is representative of a biogenic environment dominated by natural emissions of VOC. The second reproduces a moderately polluted typical urban area of the Guinean Gulf (Cotonou in Benin). For the sake of simplicity, simulations analysis are limited to the chemical reaction between isoprene and OH in the biogenic case, and the reaction between C>2 aldehydes and OH in the anthropogenic case. The convective boundary layer influence is studied at thermal and domain scale. This makes the connection with coarse resolution models for which a hypothesis of perfect and immediate mixing is made, neglecting the spatial variability of chemical species within a grid cell. The first results are based on the gaseous phase only. Cloudy development in the convective boundary layer only affects the vertical transport of chemical species. The simulations show that thermals are preferential reaction zones where the chemical reactivity is the highest. The top of the boundary layer is the region characterized by the highest calculated segregation intensities but of the opposite sign in both environments. In the biogenic environment, the inhomogeneous mixing of isoprene and OH in this zone leads to a maximum decrease of 30% of the mean reaction rate. In the anthropogenic case, the effective rate constant for OH reacting with aldehydes is 16% higher at maximum than the averaged value. The OH reactivity is higher by 15 to 40% inside thermals compared to the surroundings depending on the chemical environment and time of the day. Because thermals occupy a small fraction of the simulated domain, the impact of turbulent motions on the domain-averaged OH total reactivity reaches a maximum 9% decrease for the biogenic case and a maximum of 5% increase for the anthropogenic case. LES simulations including the aqueous reactivity reveal a significant decrease in OH mixing ratios associated to the presence of clouds. Consequently, isoprene and C>2 aldehydes mixing ratios increase at these altitudes.

The structure, bonding and chemistry of water and hydroxyl on metal surfaces are presented. Synchrotron based x-ray photoelectron- and x-ray absorption spectroscopy along with density functional theory calculations mainly form the basis of the results. Conditions span the temperature range 35 - 520 K and pressures from ultra-high vacuum (~10 fAtm) to near ambient pressures (~1 mAtm). The results provide, e.g, new insights on the importance of hydrogen bonding for surface chemical kinetics. Water adsorbs intact on the Pt(111), Ru(001) and Cu(110) surfaces at low temperatures forming 2-dimensional wetting layers where bonding to the metal (M) mainly occurs via H2O-M and M-HOH bonds. Observed isotope differences in structure and kinetics for H2O and D2O adsorption on Ru(001) are due to qualitatively different surface chemistries. D2O desorbs intact but H2O dissociates in kinetic competition with desorption similar to the D2O/Cu(110) system. The intact water layers are very sensitive to x-ray and electron induced damage. The mixed H2O:OH phase on Ru(001) consists of stripe-like structures 4 to 6 Ru lattice parameters wide where OH decorates the edges of the stripes. On Pt(111), two different long-range ordered mixed H2O:OH structures are found to be inter-related by geometric distortions originating from the asymmetric H-bond donor-acceptor properties of OH towards H2O. Water adsorption on Cu(110) was studied at near ambient conditions and compared to Cu(111). Whereas Cu(111) remains clean, Cu(110) holds significant amounts of water in a mixed H2O:OH layer. The difference is explained by the differing activation barriers for water dissociation, leading to the presence of OH groups on Cu(110) which lowers the desorption kinetics of water by orders of magnitude due to the formation of strong H2O-OH bonds. By lowering the activation barrier for water dissociation on Cu(111) by pre-adsorbing atomic O, generating adsorbed OH, similar results to those on Cu(110) are obtained.

The thesis is dedicated to the synthesis, comprehensive material science and some sensing properties of SnO2-MetOx oxide systems (where MetOx are IVB and IIIB metal oxides). The study was performed in comparison with blank SnO2, and SnO2 doped with noble metals (Pd, Pt, Rh and their binary mixtures). Results of 8 ex-situ (TEM, HRTEM, XRD, FTIR, UV-Vis, BET, XPS and element analysis), 5 in-situ (TGA, MS-analysis, DRIFT, TXRD, TPR) techniques and sensing properties characterization (DC measurements as a function of temperature and gas composition) are discussed regarding surface chemistry of SnO2 sensing phenomenon. The special attention is paid to the role of surface hydroxyls in the processes related with conductivity change of semiconductor adsorbents upon hydrogen chemisorption and oxidation in dry and humid air. / Los principales objetivos de la presente investigación fueron la síntesis de las sistemas oxídicos SnO2-MetOx (donde MetOx corresponde a los óxidos de grupos IVB y IIIB), el estudio extensivo de sus propiedades fisicoquímicas y sus propiedades como sensores de gases. La investigación se ha basado en la comparación de estos materiales con el SnO2 puro y el SnO2 dopado con metales nobles (Pd, Pt, Rh y sus combinaciones binarias). Resultados de 8 estudios ex-situ (TEM, HRTEM, XRD, FTIR, UV-Vis, BET, XPS y MS-análisis de elementos), 5 estudios in-situ (TGA, MS-analysis, DRIFT, TXRD, TPR) y la caracterización de los sensores de gases (conductividad de los materiales semiconductores en función de la temperatura y los componentes de los gases compuestos) se analizan considerando las reacciones químicas superficiales del SnO2. Se ha prestado una especial atención en la participación de los grupos hidroxilo superficiales en el mecanismo de cambio de conductividad del adsorbente semiconductor durante la quimisorción u oxidación del hidrógeno en el aire seco o húmedo.

In this thesis, a detailed investigation has been carried out on the use of electro-Fenton technique for the oxidation of the some persistent organic pollutants for the sake of water remediation. This technique produces *OH radicals electrocatalytically and uses them to oxidize the organic pollutants. The overall study can be divided into three parts. In the first part, the removal of selected synthetic dyes and pesticides from water was investigated by using carbon felt (CF) cathode. The oxidation kinetics of the synthetic dyes (Acid Orange 7 and Basic Blue 3) and pesticides (picloram, propham, azinphos-methyl and clopyralid) were determined. Mineralization kinetics of the related organic pollutants in aqueous medium was followed by total organic carbon and chemical oxygen demand analysis. The overall mineralization was obtained in all cases. Identification and quantification of the oxidation by-products of the given synthetic dyes and pesticides were performed by high performance liquid chromatography, gas chromatography-mass spectrometry, liquid chromatography-mass spectrometry and ion chromatography. These systematic analysis showed that the initial organic pollutants were converted into three intermediate forms; organic intermediates, short-chain aliphatic carboxylic acids and inorganic ions. Based on the intermediates identified, a plausible mineralization pathway was proposed for each dye and pesticide.In the second part of the study, the H2O2 production ability of carbon sponge (CS) as a novel cathode material for the electro-Fenton technique was investigated for the first time in the literature. The obtained results indicated that CS has a H2O2 production ability three times higher than the classical cathode CF.In the third and last part, the efficiency of boron doped diamond (BDD) as an anode in the electro-Fenton technique was investigated. Firstly, the oxidation and mineralization ability of BDD was tested for herbicide propham in anodic oxidation conditions. Then, the combination of CS and BDD electrode in the electro-Fenton technique was examined. The obtained results indicated that this combination allowed the most efficient results throughout the thesis. Moreover, the use of BDD anode in the electro-Fenton technique had considerable effect on the oxidation and mineralization of organics and especially carboxylic acids such as oxalic and oxamic acids which were highly resistant to mineralization in the case of Pt anode

Neste trabalho, foram efetuados estudos sobre o comportamento eletroforético dos íons hidrônio (H3O+) e hidroxila (OH-) utilizando eletroforese capilar em zona em meio não-tamponado e detecção condutométrica sem contato. Alterações na composição do eletrólito de corrida devido à eletrólise foram evitadas empregando um sistema de eletrólise separada. A determinação de ácidos com pKas menores ou iguais ao pH do eletrólito de corrida foi possível. A possibilidade da análise em bases fortes também foi demonstrada. Eletrólitos de corrida com pH entre 4,5 e 7,0 (para o H3O+) e entre 7,0 e 9,0 (para o OH-) mostraram-se favoráveis para a análise. Ambas as espécies apresentaram interação com os grupos silanóis do capilar. Dificuldades na análise do íon OH- decorreram também de: reação da sílica com o analito e com o eletrólito de corrida e absorção de CO2 atmosférico. A mobilidade do íon H3O+ medida foi 8% abaixo da obtida por outras técnicas. A curva para determinação de OH- em base forte, com solução de trifluoracetato de lítio 10 mmol L-1 (pH 8,5) como eletrólito de corrida, mostrou boa linearidade na faixa de 0,5 a 7,0 mmol L-1. As curvas de quantificação de H3O+ titulável em amostras de ácidos fortes, fracos e suas misturas, com solução de LiCl (pH 5,5) como eletrólito de corrida, apresentaram ampla faixa de resposta linear, com boa linearidade, ao redor de 0,05 a 10 mmol L-1. / In this work, studies about the electrophoretic behavior of hydronium (H3O+) and hydroxyl (OH-) ions using capillary zone electrophoresis in unbuffered medium and contactless conductity detection were developed. Variations in running electrolyte composition due to electrolysis were avoided using an electrolysis separated system. The analysis of acids with the same or lower pKa than the running electrolyte pH was possible. The possibility of strong bases analysis was demonstrated as well. Good results were achieved using running electrolytes with pH between 4.5 and 7.0, for H3O+ analysis, and between 7.0 and 9.0, for OH- analysis. Both species interacted with the silanol groups of silica capillary. Other problems in the determination of OH- were: reaction of silica with the analyte as well as with the running electrolyte and absorption of atmospheric CO2. The H3O+ mobility calculated was 8% lower than values obtained in the literature. Analytical curve of OH- ion in strong base, using 10 mmol L-1 litium trifluoracetate (pH 8.5) as running electrolyte, resulted in good linearity in a range of 0.5 to 7.0 mmol L-1. Analytical curves of titrable hydronium ion in samples of strong and weak acids, as well in their mixture, using 10 mmol L-1 LiCl (pH 5.5) as running electrolyte, resulted in wide linear range (0.05 mmol L-1 to 10 mmol L-1).

Le milieu nuageux est un milieu complexe au sein duquel un grand nombre d’espèces chimiques peuvent être transformées. Dans ce cadre, la caractérisation chimique et la réactivité photochimique de la phase aqueuse des nuages ont été étudiées. La caractérisation chimique de la phase aqueuse des nuages a permis de montrer que les masses d’air échantillonnées au sommet du puy de Dôme sont majoritairement sous trois influences distinctes, à savoir océanique, continentale et anthropique. La distribution des paramètres physicochimiques et des composés inorganiques est dépendante du type de masses d’air échantillonnées. De plus, la quantification des acides carboxyliques et des aldéhydes a permis de mettre en avant la complexité de la matière organique avec la présence d’une multitude de composés encore non identifiés. L’étude de la réactivité photochimique de la phase aqueuse des nuages a également été réalisée, montrant que la capacité photooxydante de la phase aqueuse des nuages ainsi que les vitesses de dégradation de différentes espèces chimiques sont plus importantes pour les masses d’air polluées. Pour la première fois, des vitesses de photoproduction des radicaux hydroxyles ont été évaluées dans la phase aqueuse des nuages, montrant que les ions nitrates et le peroxyde d’hydrogène sont des sources photochimiques majeures des radicaux hydroxyles (représentant jusqu’à 80 % de leur photoproduction totale). / Clouds represent complex media where many species can be transformed. In order to characterize the chemical composition of cloud water and to better understand the processes involved in the transformations of these species, the characterization and the photoreactivity of cloud water were studied. The characterization of cloud water showed that air masses sampled at the puy de Dôme station can be subject to different influences (marine, continental and anthropogenic). The distribution of the physicochemical parameters and of inorganic compounds was different for each kind of air masses. Moreover, the quantification of carboxylic acids and aldehydes showed the complexity of the organic matter contained in cloud water, with the presence of many unknown organic compounds. The photoreactivity of cloud water was also studied, showing that the oxidizing capacity of cloud water and the degradation rate of organic compounds were higher in polluted air masses. For the first time, hydroxyl radical formation rates were determined in cloud water sampled at the puy de Dôme station, showing that nitrate ions and hydrogen peroxide are among the main sources of hydroxyl radicals (contributing up to 80 % of their total photoformation).

This study extends the work we have previously done by reporting on both gas-phase and particulate phase PCB concentrations in Chicago air as well as giving a first report on airborne OH-PCBs in Chicago. Gas phase PCB concentrations ranged from 43.1 pg/m³ to 2250 pg/m³, with an average concentration of 594 pg/m³ ± 445 pg/m³, and exhibited strong temporal trends. Particulate phase PCBs accounted on average for 4.3% of total PCBs in a sample. OH-PCBs were detected in both the gas and particulate phase and exhibit characteristics of either emission sources or atmospheric reactions depending on the congener.

To determine if greater amounts of hydroxyl radical (·OH) are formed by dopamine (DA) denervation and treatment with L-dihydroxyphenylalanine (L-DOPA), the neostriatum was DA denervated (99% reduction in DA content) by 6-hydroxydopamine treatment (134μg icv, desipramine pretreatment) of neonatal rats. At 10 weeks the peripherally restricted dopa decarboxylase inhibitor carbidopa (12.5mg/kg i.p.) was administered 30min before vehicle, L-DOPA (60mg/kg i.p.), or the known generator of reactive oxygen species, 6-hydroxydopa (6-OHDOPA) (60mg/ kg i.p.); and this was followed 30min later (and 15 min before termination) by the spin trap, salicylic acid (8 μmoles icv). By means of a high performance liquid chromatographic method with electrochemical detection, we found a 4-fold increase in the non-enzymatically formed spin trap product, 2,3-dihydroxybenzoic acid (2,3-DHBA), with neither L-DOPA nor 6-OHDOPA having an effect on 2,3-DHBA content of the neostriatum. Basal content of 2,5-DHBA, the enzymatically formed spin trap product, was 4-fold higher vs. 2,3-DHBA in the neostriatum of untreated rats, while L-DOPA and 6-OHDOPA each reduced formation of 2,5-DHBA. We conclude that DA innervation normally suppresses ·OH formation, and that the antiparkinsonian drug L-DOPA has no effect (2,3-DHBA) or slightly reduces (2,5-DHBA) ·OH formation in the neostriatum, probably by virtue of its bathing the system of newly formed ·OH.

Parmi tous les nanomatériaux carbonés, les nanodiamants de détonation (NDs) possèdent des propriétés physico-chimiques exceptionnelles faisant d’eux un matériau idéal pour les applications en biologie. Aujourd’hui, la production industrielle permet de synthétiser des NDs ayant une taille de 5 nm comportant un cœur diamant et une enveloppe de surface possédant différentes terminaisons. La chimie de surface des NDs peut être modifiée par recuit ou par plasma donnant des NDs négativement ou positivement chargés en suspension dans l’eau. Notre équipe a récemment démontré des propriétés radiosensibilisantes des NDs hydrogénés par plasma (H-NDs) sur des lignées cellulaires cancéreuses radiorésistantes. Ces résultats prouvent leur aptitude thérapeutique comme agents radiosensibilisants. Cependant, les mécanismes impliqués dans cet effet ne sont pas bien compris. L’objectif principal de ce travail de thèse est d’étudier le comportement des NDs en suspension dans l’eau sous irradiation (rayons X et gamma) et de mesurer la production d’espèces réactives de l’oxygène (ROS) en particulier les radicaux hydroxyles HO. Des expériences complémentaires ont permis de détecter la production d’électrons solvatés (eaq). La détection des radicaux HO et des électrons solvatés (eaq) a été réalisée en utilisant une sonde fluorescence, la 7 OH-coumarine, dans des atmosphères différentes (air and N2O/O2). Différentes chimies de surface ont été comparées (oxydée, hydrogénée, graphitisée en surface) préparées à partir de la même source de NDs. En parallèle, les propriétés colloïdales et la stabilité de ces NDs dans l’eau ont été étudiées à court et à long terme en fonction de leur chimie de surface. Une surproduction de radicaux HO a été mesurée pour les H-NDs hydrogénés par les deux méthodes et pour les NDs recuites sous vide à 750°C. De plus, une surproduction d’électrons solvatés a été mise en évidence pour les H-NDs. Ces résultats sont discutés en fonction de la chimie de surface, la stabilité colloïdale et les interactions spécifiques des molécules d’eau avec les NDs. / Among all nanocarbons, detonation nanodiamonds (NDs) possess outstanding chemical and physical properties suitable for bio-applications. Well-controlled mass production provides NDs with a primary size of 5 nm made of a diamond-core and a shell-coating containing various surface terminations. Surface chemistry of NDs can be tuned via thermal or plasma treatments providing either positively or negatively charged NDs in water suspension. Our group recently showed that plasma hydrogenated NDs (H-NDs) behave a radiosensitizing effect on radioresistant cancer cell lines providing potential therapeutic abilities as radiosensitizing agents. Nevertheless, the mechanisms involved behind this effect are not currently well understood. The main goal of this PhD is to study the behaviour of NDs suspended in water under ionizing radiations (X-ray and Gamma) and to investigate the production of reactive oxygen species (ROS), in particular hydroxyl radicals (HO). Additional experiments allow to detect also produced solvated electrons (eaq). The detection of HO radicals and solvated electrons was realized in the presence of a fluorescence probe, the 7 OH-coumarin, under various atmospheres (air and N2O/O2). Starting from the same source of NDs, different surface chemistries were compared (oxidized, hydrogenated and surface graphitized). In parallel, colloidal properties and stability of these modified NDs in water with respect to their surface chemistry were investigated at short and long term. An overproduction of HO was observed for H-NDs for both hydrogenation methods and vacuum annealed NDs at 750°C. In addition, the production of solvated electrons was confirmed for H-NDs. These results were discussed taking into account the surface chemistry, the colloidal stability and specific interactions of water molecules with NDs.

Indiana University-Purdue University Indianapolis (IUPUI) / Fast photochemical oxidation of proteins (FPOP) is an emerging footprinting method that utilizes hydroxyl radicals. The use of hydroxyl radicals create stable labeled products that can be analyzed with mass spectrometry. The advantage of FPOP over other methods is the fast acquisition of results and the small amount of sample required for analysis. Protein structure and protein- ligand interactions have been studied with FPOP. Here we evaluated (1) the reproducibility of FPOP, (2) the effect of hydrogen peroxide concentration on oxidation and (3) the use of FPOP to evaluate protein- nucleic acid interaction with Apurinic/Apurinic endonuclease 1 (APE1) protein. APE1 is a pleotropic protein that has been crystallized and studied widely. The 35641.5 Da protein has two major functional activities: DNA repair and redox function. An intact protein study of APE1 showed consistent global labeling by FPOP and a correlation between oxidation and hydrogen peroxide concentration. Furthermore, analysis of APE1 with DNA was done in hopes of probing the DNA binding site. Although the oxidation observed was not sufficient to define the complex pocket, a dramatic effect was seen in residue oxidation when DNA was added. Interestingly, the internal residues were labeled collectively in all APE1 experiments which indicates partial unfolding of the protein as previously suggested in the literature. Hence, these findings establish the use of FPOP to capture protein dynamics and provide evidence of the existence breathing dynamics of APE1.