<p>Sensory neuron diversity is a common theme in the animal kingdom. It provides the cellular infrastructure that supports the accurate perception of the external world. Among all sensory systems, the olfactory system demonstrates an extreme in the extraordinarily diversified neuronal classes it holds. The system-wide cellular diversity is in sharp contrast with the individual specialization of olfactory receptor neurons (ORNs) per se. How the nervous system, particularly the olfactory system, uses limited genetic information to generate a huge variety of neurons with distinct properties remains elusive. </p><p>The adult Drosophila olfactory system is an excellent model to address this question due to its conserved organizational principles and reduced complexity. The fly olfactory appendages contain 50 ORN classes, each of which expresses a single receptor gene from a family of ~80 genes. Stereotyped clusters of 1-4 ORN classes define about 20 sensilla subtypes, belonging to 3 major morphological types. All cellular components within a sensillum are born by a single sensory organ precursor (SOP) via asymmetric divisions. The molecular mechanisms that determine SOP differentiation potentials to develop into distinct sensilla subtypes and the associated ORN classes are unknown.</p><p>From a genetic screen, we identified two mutant alleles in the rotund (rn) gene locus, which has a critical function in diversifying ORN classes. Rn is required in a subset of SOPs to confer novel sensilla subtype differentiation potentials from otherwise default ones within each sensilla type lineage. In rn mutants, ORNs in rn-positive sensilla subtypes are converted to lineage-specific default rn-negative fates, resulting in only half of the normal ORN diversity. This work is described in Chapter 2.</p><p>Based on an unbiased time-course transcriptome analysis, we discovered two critical downstream targets of Rn, Bric-à-brac (Bab) and Bar. In light of the knowledge about leg development, we found these genes, along with Apterous (Ap) and Dachshund (Dac), are part of the conserved proximal-distal (PD) gene network that play a crucial role in patterning the antennal precursor field prior to proneural gene-mediated SOP selection. Interactions between these PD genes under the influence of morphogen gradients separate the developing antennal disc into 7 concentric domains. Each ring is represented by a unique combination of the aforementioned transcription factors, coding the differentiation potentials for a limited number of sensilla subtypes. Genetic perturbations of the network lead to predictable changes in the ratios of different sensilla subtypes and corresponding ORN classes. In addition, using CRISPR/Cas9 technology, we were able to add tags to specific rn isoforms in the endogenous locus, and show positive regulation of Bab and negative regulation of Bar by the direct binding of Rn to the promoters in vivo. This work is presented in Chapter 3.</p><p>We proposed a three-step mechanism to explain ORN diversification, starting from pre-patterning of the precursor field by PD genes, followed by SOP selection by proneural genes, and ended with Notch-mediated neurogenesis. The final outcomes are greatly determined by the pre-patterning phase, which may be modified during evolution to compensate special olfactory needs by individual species. In our model, each step serves a single purpose, which displays context-dependent functions. By changing contexts, reassembly of the same logical steps may guide neuronal diversification in parallel systems with completely different identities. This step-wise mechanism seems to be a common strategy that is used by many other systems to generate neuronal diversity.</p> / Dissertation

Les neurones pyramidaux de la région CA3 de l'hippocampe présentent une diversité morphologique, physiologique, biochimique, mais aussi fonctionnelle. Une partie des caractéristiques des neurones étant acquise pendant le développement, nous avons formulé l'hypothèse que la diversité morpho-fonctionnelle des neurones pyramidaux serait déterminée aux stades embryonnaires. Pour tester cette hypothèse, nous avons utilisé des souris transgéniques pour lesquelles l'expression d'un marqueur fluorescent (GFP) est conditionnée par la date de neurogenèse des neurones glutamatergiques. Nous avons enregistré l'activité des neurones en imagerie calcique et montré que les neurones pyramidaux nés le plus tôt déchargent pendant la phase d'initiation des activités épileptiformes générées par le blocage pharmacologique de la transmission GABAergique rapide. De plus, nous montrons que ces neurones précoces possèdent des propriétés morpho-physiologiques distinctes. Enfin, nous montrons que la stimulation de neurones pyramidaux nés tôt peut générer des activités épileptiformes à des stades immatures lorsqu'ils sont stimulés en groupe, et à des stades juvéniles lorsqu'ils sont stimulés individuellement. Ainsi nous démontrons qu'il existe un lien entre la date de neurogenèse et les propriétés morpho-fonctionnelles des neurones pyramidaux de CA3. / There is increasing evidence that CA3 pyramidal cells are biochemically, electrophysiologically, morphologically and functionally diverse. As most of these properties are acquired during development, we hypothesized that the heterogeneity of the morphofunctionnal properties of pyramidal cells could be determined at the early stages of life. To test this hypothesis, we used a transgenic mouse line in which we glutamatergic cells are labelled with GFP according to their birth date. Using calcium imaging, we recorded multineuron activity in hippocampal slices and show that early generated pyramidal neurons fire during the build-up phase of epileptiform activities generated in the absence of fast GABAergic transmission. Moreover, we show that early generated pyramidal neurons display distinct morpho-physiological properties. Finally, we demonstrate that early generated neurons can generate epileptiform activities when stimulated as assemblies at immature stages, and when stimulated individually at juvenile stages. Thus we suggest a link between the date of birth and the morpho-functional properties of CA3 pyramidal neurons.

Le réseau des ganglions de la base (GB) est un ensemble de structures sous corticales, dont la principale fonction est le contrôle du mouvement volontaire. Le Globus Pallidus (GP), équivalent du GPe chez le primate, est un noyau constitué exclusivement de neurones GABAergiques, qui joue un rôle clé dans le fonctionnement des GB de par ses projections inhibitrices diffuses sur l’ensemble des structures de ce macrocircuit. Bien qu’une diversité neuronale au sein du GP ait été suggérée sur les bases de l’origine embryonnaire, de l’expression de protéines spécifiques ou encore de l’activité électrique des neurones, ces différents paramètres n’ont pas été corrélés de manière claire. Notre premier objectif a donc été de corréler les propriétés membranaires de neurones du GP enregistrés en patch-clamp sur des tranches de cerveau de rat avec l’expression spécifique de deux marqueurs neuronaux : une protéine liant le calcium, la parvalbumine (PV) ou un facteur de transcription, Forkhead Box 2 (FoxP2). Nous avons observé des différences électrophysiologiques significatives entre les neurones PV-positifs et FoxP2-positifs. Ce résultat nous a amené à formuler l’hypothèse qu’ayant des propriétés distinctes, les neurones PV-positifs et FoxP2-positifs pouvaient être connectés de manière différente au sein du réseau des ganglions de la base. Nous avons donc réalisé des expériences de traçage neuronal in vivo afin d’identifier les structures cibles de chaque sous-population. Nous montrons que les neurones PV-positifs projettent sur les structures de sortie des ganglions de la base tandis que les neurones FoxP2-positifs projettent uniquement sur le striatum. Enfin, le GP étant majoritairement composé de neurones PV-positifs, nous avons décidé de manipuler spécifiquement l’activité électrique de cette population in vitro et in vivo grâce à l’optogénétique. Nous présentons des résultats montrant que la modulation de l’activité électrique des neurones PV-positifs modifie le comportement moteur chez l’animal vigile. Nos résultats d’immunohistochimie et d’électrophysiologie in vitro démontrent pour la première fois l’existence d’une diversité neuronale au sein du GP. Nos expériences constituent la première étude du rôle des neurones PV-positifs dans le contrôle du mouvement volontaire. / Globus Pallidus (GP in Rodents; GPe in Primates) which belongs to the indirect pathway of basal ganglia is often, if not always, considered as an homogeneous entity which simply relays striatal information through the subthalamic nucleus, downstream to the output of basal ganglia, the substantia nigra pars reticulata. Prototypical GP neurons are often described as fast-spiking GABAergic cells which express parvalbumin (PV) as a neurochemical marker. However, cellular heterogeneity in GP has been suggested by anatomical, neurochemical, fate mapping analysis and electrophysiological activity in vivo but a clear demonstration of the existence of distinct cell types in GP, which requires by definition correlation of electrophysiological activity with neurochemistry and structure, is still missing. The objective of my PhD was i) to determine if the expression of specific neuronal markers in GP neurons is correlated with specific electrophysiological properties, ii) to understand the function of identified cell types in motor control, in order to prove that neuronal diversity exists and matters in GP. We show that electrical activity and repertoire of ionic channels differ in PV-positive and FoxP2-positive neurons. We demonstrate that PV-positive neurons do project on downstream structures whereas FoxP2-positive neurons exclusively target striatum. We report that manipulating PV-positive neurons using optogenetics induce changes in motor behavior. Thus, our results contribute to highlight the function of GP in motor control.

Wir untersuchen globale dynamische Phänomene, die sich von dem Zusammenspiel zwischen Netzwerktopologie und Dynamik der einzelnen Elementen ergeben. Im ersten Teil untersuchen wir relativ kleine strukturierte Netzwerke mit überschaubarer Komplexität. Als geeigneter theoretischer Rahmen für erregbare Systeme verwenden wir das Kuramoto und Shinomoto Modell der sinusförmig-gekoppelten "aktiven Rotatoren" und studieren das Kollektivverhalten des Systems in Bezug auf Synchronisation. Wir besprechen die Einschränkungen, die durch die Netzwerktopologie auf dem Fluss im Phasenraum des Systems gestellt werden. Insbesondere interessieren wir uns für die Stabilitätseigenschaften von Fluss-invarianten Polydiagonalen und die Entwicklungen von Attraktoren in den Parameterräume solcher Systeme. Wir untersuchen zweidimensionale hexagonale Gitter mit periodischen Randbedingungen. Wir untersuchen allgemeine Bedingungen auf der Adjazenzmatrix von Netzwerken, die die Watanabe-Strogatz Reduktion ermöglichen, und diskutieren verschiedene Beispiele. Schließlich präsentieren wir eine generische Analyse der Bifurkationen, die auf der Untermannigfaltigkeit des Watanabe-Strogatz reduzierten Systems stattfinden. Im zweiten Teil der Arbeit untersuchen wir das globale dynamische Phänomen selbstanhaltender Aktivität (self-sustained activity / SSA) in neuronalen Netzwerken. Wir betrachten Netzwerke mit hierarchischer und modularer Topologie , umfassend Neuronen von verschiedenen kortikalen elektrophysiologischen Zellklassen. Wir zeigen, dass SSA Zustände mit ähnlich zu den experimentell beobachteten Eigenschaften existieren. Durch Analyse der Dynamik einzelner Neuronen sowie des Phasenraums des gesamten Systems erläutern wir die Rolle der Inhibierung. Darüber hinaus zeigen wir, dass beide Netzwerkarchitektur, in Bezug auf Modularität, sowie Mischung aus verschiedenen Neuronen, in Bezug auf die unterschiedlichen Zellklassen, einen Einfluss auf die Lebensdauer der SSA haben. / In this work we study global dynamical phenomena which emerge as a result of the interplay between network topology and single-node dynamics in systems of excitable elements. We first focus on relatively small structured networks with comprehensible complexity in terms of graph-symmetries. We discuss the constraints posed by the network topology on the dynamical flow in the phase space of the system and on the admissible synchronized states. In particular, we are interested in the stability properties of flow invariant polydiagonals and in the evolutions of attractors in the parameter spaces of such systems. As a suitable theoretical framework describing excitable elements we use the Kuramoto and Shinomoto model of sinusoidally coupled “active rotators”. We investigate plane hexagonal lattices of different size with periodic boundary conditions. We study general conditions posed on the adjacency matrix of the networks, enabling the Watanabe-Strogatz reduction, and discuss different examples. Finally, we present a generic analysis of bifurcations taking place on the submanifold associated with the Watanabe-Strogatz reduced system. In the second part of the work we investigate a global dynamical phenomenon in neuronal networks known as self-sustained activity (SSA). We consider networks of hierarchical and modular topology, comprising neurons of different cortical electrophysiological cell classes. In the investigated neural networks we show that SSA states with spiking characteristics, similar to the ones observed experimentally, can exist. By analyzing the dynamics of single neurons, as well as the phase space of the whole system, we explain the importance of inhibition for sustaining the global oscillatory activity of the network. Furthermore, we show that both network architecture, in terms of modularity level, as well as mixture of excitatory-inhibitory neurons, in terms of different cell classes, have influence on the lifetime of SSA.