Fragrances are added to food, cosmetics and other products primarily for enhancement of their sensory quality (taste and/or aroma). However, the usage of these compounds is associated with the wide range of various adverse biological effects. Some fragrances widely used in cosmetics are proved to cause e.g. skin sensitization, rashes, dermatitis, headache, cough etc. To protect the health of consumers, European union approved the cosmetic directive (ES/1223/2009) that requires the labeling of 26 allergen fragrances on the final product label, if concentration exceeds the given level (0,01 % for rinse-off and 0,001 % for leave-on product). However, some producers hide the presence of allergens in the final product under the general term „aroma“. For this reason it is very important to monitor the content of these substances in cosmetic products. Fragrances are found not only in cosmetics, but the various types of food are also aromatized by them. Unlike cosmetics, the food producers are not obliged to label the presence of fragrance allergens on the packaging. Therefore, the monitoring of these fragrances is highly desirable because of the potential health risks they pose. The aim of this study was to develop a method for simultaneous determination of regulated fragrance allergens in food and everyday use products. The method based on extraction of analytes by solid phase microextraction coupled to gas chromatography with FID detection (HS-SPME-GC-FID) was chosen on the basis of the literature review. The fiber CAR/PDMS provided the highest extraction efficiency among the SPME fibers tested. Univariate and multivariate data analysis were used to optimize the main parameters affecting microextraction process. The final method validation was performed in terms of linearity, repeatability, reproducibility, recovery, limits of detection and quantification. The optimized and validated method was applied to a wide range of products including cosmetics, aromatized food and fragranced toys. These products were also subjected to sensory evaluation especially in terms of taste and/or aroma (i.e. flavour), which may be associated with the content of the monitored fragrances. The profile test (EN ISO 13299) and seven-point category ordinal scale (ISO 4121) were used for sensory evaluation.

Background The frequency of allergic contact dermatitis in children is not as negligible as had been originally thought. During the last decades, many reports have been published abroad concerning allergic contact dermatitis in children. However, the data about the Czech Republic were lacking. Aim of study The aim of the study was to determine the frequency of contact sensitization to the allergens of European baseline series in unselected child population. Material and Methods A group of 236 unselected schoolchildren aged between 6 and 16 years were patch tested with European baseline series in the years 2005 - 2006. Patch tests were evaluated in 218 (114 boys, 104 girls) according to the criteria of International Contact Dermatitis Research Group. Results One or more positive reactions had 67 children (30.7%). The top allergens in children were nickel sulfate, neomycin sulfate, potassium dichromate, cobalt chloride, Myroxylon pereirae resin (balsam of Peru) and fragrance mix I. Conclusion Results of patch tests in unselected set of Czech children are not very satisfactory. They indicate that the incidence of contact hypersensitivity in children is relatively frequent. It appears that the patch tests in the Czech Republic are not carried out on all children in whom they should be performed....

No description available.

As permanent tattoos are becoming more popular and common, an increased number of allergic reactions to tattoos is reported. The purpose of this project was to analyze tattoo inks for hazardous substances, and whether they comply to current Swedish and European legislative requirements. The tattoo inks were qualitatively analyzed for pigments, and quantitatively analyzed for metals. A total of 73 tattoo inks were collected from various sources such as a tattoo ink supplier, online retailers, and provided directly from tattoo artists. The labels of each tattoo ink bottle were inspected to investigate their compliance with the Council of Europe and the Swedish Medical Products Agency. Matrix assisted laser desorption/ionization time of flight mass spectrometry (MALDI-ToF-MS) was used to qualitatively analyze 20 selected tattoo inks for different pigments. Inductively coupled plasma mass spectrometry (ICP-MS) was used to quantitatively analyze trace metals in 70 of the samples. A large majority (90%) of the tested samples violated the requirements and criteria in the European resolution ResAP 2008(1), such as information on name and address of the manufacturer, minimum date of durability, sterility, batch number, and storage. Patch and allergy testing were incorrectly recommended for many samples in a way that is not accepted by dermatologists. In a worst-case scenario, this testing could be a sensitizing step. Also, it can not prevent future allergic reactions from occurring or provide any juridical insurance. Only one brand, World Famous, fulfilled the requirements for labeling for six of the seven samples (one sample failed due to a faulty declared pigment). The brands Tang Dragon and Dynamic did not fulfill any of the requirements listed in ResAP 2008(1). The list of ingredients was incorrect for all samples from Tang Dragon (bought prior to 2019 online). Also, six of the other 50 samples from different brands (World Famous, Intenze, Fusion Tattoo Ink, Eternal Ink, Solid Ink) declared at least one pigment incorrectly in their ingredients list. 25% of the declared and theoretically detectable pigments were detected by means of MALDI-ToF-MS, whereas the other pigments were either absent or below the limit of detection. Future analyses should include an MS/MS analysis. Polyethylene glycol (PEG) was identified qualatively in 15 of the 20 samples analyzed with MALDI-ToF-MS but was not listed in any of the ingredients lists. ICP-QQQ-MS is a very sensitive technique and could both detect and verify the presence of all metal-containing pigments, as well as the level of impurities. Copper was clearly more present in green and blue colors, regardless of the brand. The metal content was evidently dependent on the brand for arsenic, aluminum, bismuth, chromium, nickel, zinc, and strontium. Elevated levels of barium and strontium (partially very high levels: up to 727 mg/kg barium and up to 8.06 g/kg strontium) were found in several samples. High amounts of aluminum (4 to 11,0 g/kg) and titanium (as judged from white precipitates and ingredients lists) were present in most samples. Nickel (0.1 to 41 mg/kg) and chromium (0.1 to 139 mg/kg) were also present in the samples. Some other impurities were also present (arsenic – 3.8 mg/kg, mercury – 1.6 mg/kg, and lead – 5.4 mg/kg for one sample, respectively). Known sensitizing pigments were declared and partially confirmed by MALDI-ToF-MS in 17 of 53 samples of the brands Radiant Colour, Eternal Ink, Fusion Tattoo Ink, and Kuro Sumi. Four samples (from Intenze, Eternal Ink, and Kuro Sumi) also declared pigments listed as non-suitable substance according to the European Commission regulation on cosmetic products from 2009.

La détection d’antigènes à large échelle s’avère être un enjeu majeur dans le secteur de la production alimentaire. Le défi persistant encore à ce jour est la détection spécifique et quantitative des protéines allergènes dans les produits commercialisés, comestibles, cosmétiques ou autres. La technique la plus répandue en industrie pour la détection de matériel biologique spécifique est le test enzyme-linked immunosorbent Assay (ELISA). ELISA permet un dosage de diverses protéines au sein d’un échantillon, mais ne détecte qu’un seul antigène à la fois, ce qui est couteux et peu efficace. La hausse des réactions allergiques notées chez la population de divers pays demande à ce qu’une technique plus efficace et moins couteuse soit développée. Dans le cadre de ce mémoire, une méthode alternative au test ELISA pour la détection d’allergènes de noix sera présentée. Cette nouvelle méthode appelée RIISA (Raman imaging immunosorbent assay), fait intervenir les propriétés de diffusion Raman de nanostructures de carbone, tel que les nanotubes et les nanocornes de carbone, pour les adapter comme sonde optique. L’objectif de ce travail est d’adapter cette méthode pour la détection triplex, permettant la reconnaissance RIISA entre trois couples d’antigène-anticorps, soit d’amande, de cachou et de noisette. Les sondes sont fonctionnalisées d’anticorps permettant la reconnaissance avec la protéine et comportent aussi un colorant encapsulé dans la cavité interne, ce qui permet la différenciation des couples. Le système de détection est couplé à l’imagerie Raman pour permettre une sensibilité plus aigüe du système. Un phénomène de réaction croisée entre les anticorps et les antigènes empêche toutefois de réaliser une détection en triplex. La preuve de concept sera donc démontrée en utilisant les trois monoplexes, et ce, avec divers colorants mettant en évidence la polyvalence du système de détection présenté. / Large scale antigen detection is a major issue in the food production sector. The challenge that still persists nowadays is the specific and quantitative detection of allergenic protein products on the market, whether edible, cosmetic or otherwise. The most widely used technique in the industry for the specific biological detection of allergens is the Enzyme-linked immunosorbent assay (ELISA). This assay detects various proteins in a simple sample. The ELISA test can detect only one allergen at a time and its quantitative detection is limited. In addition, the increase in allergic reactions observed in the population of various countries require a more efficient and less expensive technique to be developed. As part of this master’s thesis, an alternative method to the ELISA assay to detect nut allergens will be presented. This assay, called Raman imaging immunosorbent assay (RIISA), uses carbon nanostructure based nanoprobes consisting of carbon nanotubes and nanohorns. The objective is to develop a triplex detection system using RIISA, that selectively recognizes between three antigen-antibody pairs, namely almond, cashew, and hazelnut. The dye encapsulated nanoprobes are functionalized with antibodies recognizing the protein and for simultaneously differentiating the couples. The presented detection system is coupled with Raman imaging and allows a more acute sensitivity of the system. However, cross reactions between the antibodies and the antigens prevent the triplex detection. The proof of concept will be demonstrated using the three monoplex couples with various dyes that highlight the versatility of the developed system.

<p>Allergic asthma is a chronic and complex disease of the airways characterized by dysregulated immune-inflammatory responses to aeroallergens and reversible airflow obstruction. The prevalence and economic burden of allergic asthma have increased substantially over the last five decades. Despite remarkable progress in our understanding of the immunobiology and pathophysiology of asthma, the ontogeny of the disease remains elusive. As a result, there is a lack of effective preventative strategies. Here, we used a murine model of allergic asthma to house dust mite (HDM), the most pervasive indoor aeroallergen worldwide to address issues pertaining to the development of allergic asthma. First, we provided a comprehensive computational view of the impact of dose and length of HDM exposure on both local and systemic allergic outcomes (Chapter 2). Parameters, such as thresholds of responsiveness, and non-linear relationships between allergen exposure, allergic sensitization and airway inflammation were identified. We, then, investigated molecular signatures implicated in the onset of allergic responses (Chapter 3). HDM exposure was associated with production of the epithelial-associated cytokines TSLP, IL-25 and IL-33. However, only IL-33 signaling was necessary for intact Th2 immunity to HDM, likely because of its superior ability to induce the critical co-stimulatory molecule OX40L on dendritic cells and expand innate lymphoid cells. Lastly, as individuals are most likely exposed to allergens concomitantly to other environmental immunogenic agents, we studied the impact of an initial immune perturbation on allergic responses to sub-threshold amounts of HDM (Chapter 4). We showed that transient expression of GM-CSF in the airway substantially lowers the threshold of allergen required to generate robust, HDM-specific Th2 immunity, likely through increasing IL-33 production from alveolar type II cells. These studies favor a paradigm whereby distinct molecular pathways can elicit type 2 immunity, intimating the need to classify asthma into distinct clinical subsets.</p> / Doctor of Philosophy (PhD)

Die Tomate ist weltweit eines der am meist konsumierten Gemüse, doch der hohe Verzehr erhöht auch das Risiko einer allergischen Reaktion. Zu den Allergenen zählen viele Proteine der Pflanzenabwehr, welche durch verschiedenste biotische und abiotische Stressoren induziert werden. Allerdings ist bis heute der Einfluss biotischer Faktoren auf die Allergenität von Obst und Gemüse weitestgehend unbekannt. Diese Dissertation befasst sich mit den Auswirkungen der symbiontischen Mykorrhiza und des pathogenen Pepino Mosaikvirus auf die Allergenität von Tomaten. Früchte von mykorrhizierten Tomatenpflanzen wiesen eine höhere Expression allergenkodierender Gene auf als die nicht mykorrhizierten Kontrollen, allerdings übertrug sich dies nicht auf die Allergenität der Tomaten. Pepino Mosaikvirus-infizierte Tomatenpflanzen zeigten keine generelle Aktivierung der Allergenexpression und auch keine erhöhte Allergenität. Aufgrund großer individueller Reaktionsunterschiede der Probanden in den klinischen Allergietests konnten einzeln auftretende Unterschiede nicht über die Gesamtheit der getesteten Allergiker abgesichert werden. Die individuellen Reaktionen der Probanden konnten wiederum nicht auf die Anzahl und Identität der Allergene von Tomatenpflanzen mit unterschiedlichen genetischen Hintergründen oder aus verschiedenen Anbauweisen zurückgeführt werden. Während der Experimente wurden 13 neue putative Tomatenallergene identifiziert unter denen das Cyclophilin rekombinant in Escherichia coli hergestellt und seine allergene Aktivität bestätigt wurde. Schlussfolgernd nahmen biotische Faktoren keinen nennenswerten Einfluss auf die Allergenität von kommerziell angebauten Tomaten. Über dies hinaus wurden neue Erkenntnisse über persistente Virus-Pflanzen Interaktionen gewonnen. Schließlich konnte die Liste der putativen Tomatenallergene um einige Kandidaten erweitert werden, von denen das Cyclophilin als Allergen bestätigt wurde. / Tomatoes are now among most consumed vegetables worldwide; unfortunately accompanied by an increasing risk of allergic reactions. Pathogenesis-related proteins can act as allergens and are induced by various biotic and abiotic stresses. Up to now nearly nothing is known about the impact of biotic factors on allergenic potentials. This thesis investigates the allergenicity of symbiotically mycorrhized and Pepino mosaic virus-infected tomato fruits. Although induced allergen-encoding gene expression was detected in the fruits of mycorrhizal tomato plants, there was no impact on allergenicity. In contrast, general induction of defence-related allergens in Pepino mosaic virus-infected tomato fruits was not observed. Consequently, clinical allergy tests did not reveal any generally increased allergenic potential of Pepino mosaic virus-infected tomato fruits. High inter-individual differences in clinical allergy tests made it difficult to make statistically confirmed statements about the allergenicity of colonised tomato fruits. However, the hypothesis that such individual variability is based on differential reactions of individual subjects to particular allergens in tomato fruits, from plants with certain genetic backgrounds or cultivated under distinct conditions, had to be rejected. During these investigations, 13 new putative tomato allergens were identified. One of the candidates, cyclophilin, was recombinantly produced in Escherichia coli and its allergenic activity was confirmed in different clinical allergy tests with tomato-allergic subjects. In conclusion, this study demonstrates that biotic factors are only of minor importance for the allergenic potential of commercially produced tomatoes. Moreover, the experiments revealed new insights into persistent plant-virus interactions. In particular, these extended the list of putative tomato allergens to include new candidates, and confirmed the allergenic activity of one of these, namely cyclophilin.

Protein sequencing has produced overwhelming amount of protein sequences, especially in the last decade. Nevertheless, the majority of the proteins' functional and structural classes are still unknown, and experimental methods currently used to determine these properties are very expensive, laborious and time consuming. Therefore, automated computational methods are urgently required to accurately and reliably predict functional and structural classes of the proteins. Several bioinformatics methods have been developed to determine such properties of the proteins directly from their sequence information. Such methods that involve signal processing methods have recently become popular in the bioinformatics area and been investigated for the analysis of DNA and protein sequences and shown to be useful and generally help better characterise the sequences. However, there are various technical issues that need to be addressed in order to overcome problems associated with the signal processing methods for the analysis of the proteins sequences. Amino acid indices that are used to transform the protein sequences into signals have various applications and can represent diverse features of the protein sequences and amino acids. As the majority of indices have similar features, this project proposes a new set of computationally derived indices that better represent the original group of indices. A study is also carried out that resulted in finding a unique and universal set of best discriminating amino acid indices for the characterisation of allergenic proteins. This analysis extracts features directly from the protein sequences by using Discrete Fourier Transform (DFT) to build a classification model based on Support Vector Machines (SVM) for the allergenic proteins. The proposed predictive model yields a higher and more reliable accuracy than those of the existing methods. A new method is proposed for performing a multiple sequence alignment. For this method, DFT-based method is used to construct a new distance matrix in combination with multiple amino acid indices that were used to encode protein sequences into numerical sequences. Additionally, a new type of substitution matrix is proposed where the physicochemical similarities between any given amino acids is calculated. These similarities were calculated based on the 25 amino acids indices selected, where each one represents a unique biological protein feature. The proposed multiple sequence alignment method yields a better and more reliable alignment than the existing methods. In order to evaluate complex information that is generated as a result of DFT, Complex Informational Spectrum Analysis (CISA) is developed and presented. As the results show, when protein classes present similarities or differences according to the Common Frequency Peak (CFP) in specific amino acid indices, then it is probable that these classes are related to the protein feature that the specific amino acid represents. By using only the absolute spectrum in the analysis of protein sequences using the informational spectrum analysis is proven to be insufficient, as biologically related features can appear individually either in the real or the imaginary spectrum. This is successfully demonstrated over the analysis of influenza neuraminidase protein sequences. Upon identification of a new protein, it is important to single out amino acid responsible for the structural and functional classification of the protein, as well as the amino acids contributing to the protein's specific biological characterisation. In this work, a novel approach is presented to identify and quantify the relationship between individual amino acids and the protein. This is successfully demonstrated over the analysis of influenza neuraminidase protein sequences. Characterisation and identification problem of the Influenza A virus protein sequences is tackled through a Subgroup Discovery (SD) algorithm, which can provide ancillary knowledge to the experts. The main objective of the case study was to derive interpretable knowledge for the influenza A virus problem and to consequently better describe the relationships between subtypes of this virus. Finally, by using DFT-based sequence-driven features a Support Vector Machine (SVM)-based classification model was built and tested, that yields higher predictive accuracy than that of SD. The methods developed and presented in this study yield promising results and can be easily applied to proteomic fields.

Allergic asthma is characterized by airway hyperresponsiveness, inflammation, and a cellular infiltrate dominated by eosinophils. Numerous epidemiological studies have related the exacerbation of allergic asthma with an increase in ambient inhalable particulate matter from air pollutants. This is because inhalable particles efficiently deliver airborne allergens deep into the airways, where they can aggravate allergic asthma symptoms. However, the cellular mechanisms by which inhalable particulate allergens (pAgs) potentiate asthmatic symptoms remain unknown, in part because most in vivo and in vitro studies exploring the pathogenesis of allergic asthma use soluble allergens (sAgs). Using a mouse model of allergic asthma, we found that, compared with their sAg counterparts, pAgs triggered markedly heightened airway hyperresponsiveness and pulmonary eosinophilia in allergen-sensitized mice. Mast cells (MCs) were implicated in this divergent response, as the differences in airway inflammatory responses provoked by the physical nature of the allergens were attenuated in MC-deficient mice. The pAgs were found to mediate MC-dependent responses by enhancing retention of pAg/IgE/FcεRI complexes within lipid raft–enriched, CD63(+) endocytic compartments, which prolonged IgE/FcεRI-initiated signaling and resulted in heightened cytokine responses. These results reveal how the physical attributes of allergens can co-opt MC endocytic circuitry and signaling responses to aggravate pathological responses of allergic asthma in mice. / Dissertation

A asma é uma doença crônica inflamatória das vias aéreas, de importância mundial pela sua elevada prevalência, com considerável impacto na qualidade de vida dos pacientes. Dentre os diferentes fenótipos de asma, a asma alérgica constitui a maioria dos casos. Dentre os diferentes desencadeantes de exacerbações na asma, os aeroalérgenos têm papel de destaque, sendo os ácaros o grupo mais importante e prevalente. Entre os ácaros, os mais relevantes para estudo são o Dermatophagoides pteronyssinus (Der p) e a Blomia tropicalis (Blo t), com importância significativa nos países tropicais. Pacientes podem ser sensibilizados a esses dois ácaros ou a um deles somente, mas a positividade do teste in vivo ou in vitro não significa reatividade clínica e que haja concordância com o alérgeno relevante para o desencadeamento dos sintomas. A reatividade cruzada entre esses dois ácaros vem sendo estudada. In vivo, há poucos trabalhos demonstrando a reatividade cruzada entre Der p e Blo t e analisando a correlação entre os testes cutâneos e os de provocação brônquica. O objetivo desse estudo é avaliar a reatividade clínica em pacientes com asma sensibilizados a ambos os ácaros, Der p e Blo t. Para isso, pacientes com asma do Ambulatório do Serviço de Imunologia Clínica e Alergia do HC-FMUSP foram selecionados. Broncoprovocações específicas foram realizadas com os dois ácaros, em diferentes momentos. Dezoito pacientes com asma foram selecionados, e trinta e seis provocações foram realizadas. Todas as provocações com o ácaro Der p foram positivas. Em relação à Blo t, o resultado foi positivo em 93% dos testes. No presente estudo, houve concordância na maioria dos casos entre a presença de sensibilização aos ácaros estudados e a positividade na boncoprovocação. Portanto, as sensibilizações aos ácaros identificados no teste cutâneo são relevantes para o desencadeamento dos sintomas de asma nesses pacientes / Asthma is a chronic inflammatory disease of the airways of global importance due to its high prevalence, with considerable impact on quality of life of patients. Among the different phenotypes of asthma, allergic asthma constitutes the majority of cases. Among the different triggers of asthma exacerbations, aeroallergens have the leading role, being mites group more important and prevalent. Among the mites, the most relevant to the study are Dermatophagoides pteronyssinus (Der p) and Blomia tropicalis (Blo t), with significant importance in tropical countries. Patients can be sensitive to these two mites or only one of them, but the positivity of test in vivo or in vitro clinical reactivity and does not mean that there is agreement with the relevant allergen for the triggering of symptoms. The cross-reactivity between these two mites has been studied. In vivo, there are few studies demonstrating the cross-reactivity between Der p and Blo t analyzing the correlation between skin tests and bronchial provocation. The aim of this study is to evaluate the clinical reactivity in patients with asthma sensitized to both house dust mites, Der p and Blo t. For this reason, patients with asthma, Ambulatory Service of Clinical Immunology and Allergy HCFMUSP were selected. Specific bronchial provocation tests were performed with both mites at different times. Eighteen patients with asthma were selected, and thirty-six provocations were performed. All provocations with the mite Der p were positive. Regarding Blo t, the result was positive in 93% of tests. In the present study, there was agreement in most cases between the presence of sensitization to mites and positivity in bronchial provocation test. Therefore, sensitization to mites in skin test identified is relevant to the triggering of asthma symptoms in these patients