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Rôle des jonctions communicantes dans la paroi artérielle pulmonaire : implications en physiopathologie / Role of gap junction communication in pulmonary arterial wall : implications in pathophysiologyBillaud, Marie 25 November 2009 (has links)
Les jonctions communicantes jouent un rôle important dans la prolifération et la réactivité vasculaire systémique. Dans cette étude, nous avons recherché le rôle de ces structures dans la paroi artérielle pulmonaire saine et dans l’hypertension artérielle pulmonaire (HTAP). L’HTAP est une pathologie de la circulation pulmonaire caractérisée par une prolifération cellulaire pathologique et une hyperréactivité à divers agonistes vasoconstricteurs tels que la sérotonine (5-HT). Dans la paroi artérielle pulmonaire de rats sains les protéines constituant les jonctions communicantes vasculaires (les connexines 37, 40 et 43) sont présentes. De plus, la connexine 43 située au niveau de la jonction myoendothéliale (JME) intervient dans la réactivité à la 5-HT. La 5-HT produit par ailleurs, (1) de l’anion superoxyde (O2?) au niveau du muscle lisse et (2) un vasodilatateur (le monoxyde d’azote (NO)) au niveau de l’endothélium. La JME va permettre le passage de l’O2? du muscle lisse vers l’endothélium de façon à piéger le NO et maintenir une contraction physiologique de l’artère pulmonaire. L’étude des jonctions communicantes dans la circulation pulmonaire pathologique a été réalisée sur deux modèles de rats atteints d’HTAP : (1) le modèle de rat atteint d’HTAP suite à une injection de monocrotaline (rat MCT) et (2) le modèle de rat atteint d’HTAP suite à une hypoxie chronique (rat HC). Les connexines 37, 40 et 43 sont également exprimées au niveau de la circulation pulmonaire de ces rats, mais leur distribution au niveau du muscle lisse et l’endothélium est modifiée. La réactivité des artères pulmonaires à divers agents vasoconstricteurs (5-HT, endothéline-1, phényléphrine, solutions dépolarisantes) est modifiée chez les rats MCT et HC. De plus, l’implication des jonctions communicantes dans la réactivité à ces agents est changée chez les rats MCT et HC. Ces données apportent de nouvelles connaissances sur le rôle des jonctions communicantes dans la réponse contractile des artères pulmonaires saines, et de nouveaux éléments permettant de mieux comprendre les altérations de la vasomotricité pulmonaire observée dans l’HTAP. / Gap junction communication plays an important role in proliferation and in the regulation of vascular reactivity. In this study, we investigated the role of gap junctions in physiological pulmonary circulation and in pulmonary arterial hypertension (PAH). PAH is the main pathology of pulmonary circulation and is characterized by cell proliferation and hyperreactivity to several contractile factors such as serotonin (5-HT). In pulmonary circulation from healthy rats, gap junction proteins were observed (connexins 37, 40 and 43). Moreover, connexin 43 located at the myoendothelial junction (MEJ) is involved in the reactivity to 5-HT in pulmonary arteries from healthy rats. Indeed, 5-HT produces (1) superoxyde anion (O2?) from smooth muscle and (2) a vasodilator (nitric oxide (NO)) from endothelium. O2? will pass through MEJ from the smooth muscle to the endothelium in order to scavenge NO and thus maintain contraction in physiological conditions. Gap junctions study in pathological pulmonary arteries has been performed on two animal models of PAH: (1) monocrotaline-induced PAH (MCT rat) and (2) chronic hypoxia-induced PAH (CH rat). Connexins 37, 40 and 43 were observed in pulmonary circulation from these rats, but the localization in smooth muscle and endothelium is modified. Moreover, pulmonary arterial vasoreactivity in response to several contractile agents (5-HT, endothelin-1, phenylephrine, depolarizing solutions) is modified in MCT and CH rats. Finally, the role of gap junctions in the reactivity to these agonists is changed in MCT and CH rats. These data have important implications for understanding physiological vasoreactivity to 5-HT in pulmonary circulation, and to better understand alterations of pulmonary arterial reactivity observed in PAH.
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Efeito de difenóis sobre alguns processos oxidativos / Effects of diphenols on oxidative processesOhara Augusto 27 November 1975 (has links)
Catecol e catecolaminas foram ensaiados sobre as atividades NADPH e NADH oxidásica dos microssomos. Quantidades catalíticas de adrenalina aumentam de duas a três vezes a velocidade de oxidação do NADPH, após um pequeno período de indução. O efeito da adrenalina é suprimido pela superóxido dismutase, se a enzima é adicionada antes de iniciada a reação. O efeito catalítico é atribuído a dois produtos de oxidação da adrenalina pelo íon superóxido; à quinona, produto de oxidação de dois elétrons e ao adrenocromo, produto de oxidação de quatro elétrons. Provavelmente, o adrenocromo reoxida a NADPH citocromo c redutase, e a quinona formada reage com oxigênio, regenerando adrenocromo. A adrenalina não mostrou qualquer efeito sobre a atividade NADH oxidásica, nem sobre a atividade NADPH oxidásica, estimulada por menadiona. Provavelmente, durante estes processos, dois elétrons são transferidos simultaneamente ao oxigênio. Catecol e catecolaminas duplicam a velocidade de oxidação do NADH em presença de quantidades catalíticas de NADH-citocromo b5 redutase e citocromo b5. Este resultado sugere a formação do íon superóxido, durante a autoxidação do citocromo b5. Catecol e p-hidroquinona promovem, cataliticamente, a oxidação da oxihemoglobina e oximioglobina à forma ferri. A velocidade de oxidação da oxihemoglobina mostra dependência de primeira ordem em relação à concentração de hemeproteína e de meia ordem em relação ao difenol ; contudo a altas concentrações dos catalisadores observa-se saturação, com valores de Vmáx similares para ambos os difenóis. É proposto que uma quinona , inicialmente formada, oxida a oxihemeproteína com liberação de oxigênio; por sua vez, a semiquinona oxida uma segunda molécula de oxihemeproteína, sendo que o oxigênio ligado recebe dois elétrons. Exceto para o caso da oximioglobina, que é mais reativa, a forma reduzida do catalisador deve estar presente para se opor ao desaparecimento da semiquinona por dismutação. Desde que se observa a liberação de oxigênio, esperada para a formação de água, o sistema pode ser considerado modelo de oxidase terminal. Infere-se tentativamente, que a oxihemoglobina tem estrutura HbFe2+ ...O2, e que a velocidade da oxidação catalisada é limitada pela velocidade de produção da verdadeira forma reativa, a estrutura ferri-superóxido, HbFe3+...O-2. / Catechol and catecholamines have been assayed upon the microsomal NADPH and NADH oxidase activities. Adrenaline shows a catalytic effect on the NADPH oxidation characterized by a small lag. The two-to three fold increase in rate can be supressed by dismutase if the enzyme is added before superoxide the reaction begins. The catalytic effect is ascribed to two products of adrenaline oxidation by the superoxide ion; to the quinone, the two electron oxidation product, and to the adrenochrome, the four electron oxidation product. Presumably, the adrenochrome reoxidizes the NADPH-cytochrome c reductase, and the formed quinone reacts with oxygen and regenerates the adrenochrome. Adrenaline neither changed, the NADH oxidase activity nor the menadione-stimulated NADPH oxidase activity. Presumably in these processes, two electrons are simultaneously transferred to the oxygen. Catechol and catecholamines doubled the rate of autoxidation of NADH in the presence of catalytic amounts of NADH-cytochrome b5 reductase and cytochrome b5 This result suggests superoxide ion formation in the autoxidation of the cytochrome. Catechol and p-hydroquinone catalytically promote the oxidation of oxyhemoglobin and oxymyoglobin to the ferri-form. Kinetic data for oxyhemoglobin oxidation indicates a first-order dependence upon the hemoprotein concentration and half-order dependence upon diphenol; however at high catalyst concentration, saturation is observed with similar Vmax values for both diphenols despite the difference in reactivity. It is proposed that initially formed quinone oxidizes the hemoprotein with oxygen release; in turn the semiquinone oxidizes a second molecule of hemoprotein and regenerates the quinone, with the bound oxygen acquiring two electrons. Except for the more reactive oxymyoglobin, the reduced form of the catalyst must be present to oppose semiquinone disappearance by dismutation, Since the expected release of 02 for water formation is observed, the system may be considered a model for terminal oxidase. It is tentatively inferred that oxyhemoglobin has the structure HbFe2+...02 and that the rate of the catalyzed oxidation is limited by the rate of generation of the true reacting form, the superoxide ferri structure, HbFe3+...0-2.
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Anion-driven tetrel bond-induced engineering of lead(II) architectures with N′-(1-(2-pyridyl)ethylidene)nicotinohydrazide: experimental and theoretical findingsMahmoudi, Ghodrat, Safin, Damir A., Mitoraj, Mariusz P., Amini, Mojtaba, Kubicki, Maciej, Doert, Thomas, Locherer, Franziska, Fleck, Michel 24 July 2017 (has links)
The evaluation of N′-(1-(2-pyridyl)ethylidene)nicotinohydrazide (HL) as a linker for the PbII tagged extended structures is described. The reaction of Pb(ClO4)2 or Pb(OAc)2 with HL in MeOH at 60 °C and room temperature, respectively, leads to heteroleptic complexes {[PbL]ClO4}n·nH2O and [PbL(OAc)]2, while the same reaction of Pb(ClO4)2 with HL at 60 °C in the presence of two equivalents of NaOAc or NaNO2 leads to heteroleptic complexes {[Pb(HL)(OAc)]ClO4}n and [PbL(NO2)]n, respectively. Using Pb(NO3)2 as a source of PbII in the same reaction with HL and two equivalents of NaN3 or NaNCS at room temperature yields [PbLN3]n and [Pb2(HL)2(NO3)2(NCS)2], respectively. The room temperature reaction of Pb(NO3)2 with HL in the presence of two equivalents of NaClO4 leads to the transformation of the parent ligand to its perchlorate salt [H2L]ClO4. In all the obtained PbII structures, HL or its deprotonated form L acts both as a chelating and a bridging ligand. The nature of the inorganic anion also influences the final structure. In all complexes the PbII center exhibits a hemidirected coordination geometry with all the covalent bonds being concentrated on one hemisphere of the coordination sphere with the closest approach of two atoms on the other side varying from 151° to 232°. The sterically available PbII ion participates in tetrel bonding as evidenced from the detailed structural analysis of the described complexes. As a result of tetrel bonding, the structures of all the six compounds can be extended to a higher dimensional framework, which is further stabilized by π⋯π stacking interactions between the aromatic rings. The DFT based charge and energy decomposition (ETS-NOCV) calculations are performed in order to shed light on the nature of non-covalent interactions that determine the stability of the obtained structures.
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Rôle de la sérotonine et de la connexine 43 dans la paroi artérielle pulmonaire : implications dans l'hypertension pulmonaire / Role of serotonin and connexin 43 in the pulmonary arterial wall : implications in pulmonary hypertensionKhoyrattee, Nafiisha 12 December 2014 (has links)
Au niveau des artères intrapulmonaires (AIP) de rats sains, la connexine 43 (Cx43) située au niveau de la jonction myoendothéliale (JME) intervient dans la réactivité à la 5-HT. La 5-HT produit de l’anion superoxyde (O2•) au niveau du muscle lisse et du monoxyde d’azote (NO) au niveau de l’endothélium des AIP. La Cx43 permet alors le passage de l’O2• du muscle lisse vers l’endothélium de façon à diminuer la biodisponibilité du NO et maintenir une contraction physiologique de l’artère pulmonaire. Cependant, l’augmentation d’O2• par d’autres agonistes vasoconstricteurs tels que l’endothéline-1 (ET-1) et la phényléphrine (PHE) et les mécanismes impliqués dans cette augmentation restent encore méconnus dans la circulation pulmonaire. Ainsi, ce travail vise à identifier les agonistes qui provoquent une augmentation de la quantité d’O2• et à mettre en évidence les voies de signalisation mises en jeu au niveau des AIP de rats. Par ailleurs, la Cx43 étant impliquée dans la réactivité des AIP de rats sains à la 5-HT, le rôle de la Cx43 dans la circulation pulmonaire pathologique a été étudié à l’aide d’un modèle de souris hétérozygote pour la Cx43 (souris Cx43+/-) souffrant d’hypertension pulmonaire (HTP) hypoxique chronique (HC). Nous avons montré que l’augmentation d’O2•au niveau des AIP est un mécanisme exclusif de la 5-HT. Cette augmentation provient uniquement d’une augmentation de production par la mitochondrie et les NADPH oxydases via un mécanisme de « ROS-induced ROS release » dépendant de la PKC. La 5-HT agit par le biais des récepteurs 5-HT2A, induit un influx calcique extracellulaire qui augmente la concentration calcique mitochondriale provoquant une augmentation de production d’O2• par le complexe I de la chaîne respiratoire mitochondriale. De plus, cette voie s’exerce au sein des microdomaines de signalisation, notamment les cavéoles. D’autre part, chez les souris Cx43+/- HTP HC le remodelage des AIPest inhibé et l’hypertrophie ventriculaire droite est freinée. La vasoréactivité des AIP à la 5-HT, à l’ET-1 et à la PHE est modifiée chez les souris Cx43+/- saines et HTP HC par rapport aux souris sauvages. Ces données apportent (1) des éléments de compréhension sur les voies de signalisation mises en jeu dans la production d’O2• en réponse à la 5-HT dans la circulation pulmonaire de rats sains et (2) de connaissances nouvelles sur le rôle de la Cx43 dans les AIP de souris saines et souffrant d’HTP HC. / Under physiological conditions, in rat intrapulmonary arteries (IPA), connexin 43 (Cx43) localised at the myoendothelial junctions is involved in the reactivity to serotonin (5-HT). 5-HT increases superoxide anion (O2•) in the smooth muscle and nitric oxide (a vasodilator) in the endothelium. O2• will then rapidly pass through Cx43 to scavenge endothelial NO to decrease the bioavailability of the latter and hence maintain IPA contraction in physiological conditions. However, to date, the increase in O2• level by other contractile agonists such as endothelin-1 (ET-1) and phenylephrine (PHE) and the mechanism involved in this increase are still unknown in the pulmonary circulation. The goal of this present work is to identify the contractile agonists involved in the increase of O2• and to highlight the signaling pathways involved in the agonists-induced increase of O2•. As Cx43 plays an important role in IPA contractile reactivity to 5-HT in healthy rats, the role of Cx43 under pathological conditions of the pulmonary circulation has been studied with a mice model heterozygous for Cx43 (Cx43+/-) suffering from hypoxic pulmonary hypertension (HPH). We have shown that O2• increase in rat IPA is exclusive to 5-HT. 5-HT-induced O2• increase in rat IPA is only from an increase in production by the mitochondria and NADPH oxydase via a ROS-induced ROS release mechanism dependent on PKC. Upon binding to 5-HT2A receptors, 5-HT induces an extracellular calcium influx which is responsible for an increase in mitochondrial calcium level and causes an upregulation in O2• production by the complex I of the mitochondrial respiratory chain. Moreover, this signaling pathway takes place in specialized microdomains, namely caveolae. On the other hand, interestingly, in Cx43+/- HPH mice, IPA remodeling is inhibited and right ventricular hypertrophy is less intense. IPA vasoreactivity to 5-HT, ET-1 and PHE is modified in Cx43+/- healthy and HPH mice as compared to wild type mice. These data bring (1) new elements of comprehension in the signaling pathways involved in 5-HT-induced O2• production in healthy rat pulmonary circulation and (2) new insights on the role of Cx43 in mice IPA under physiological and HPH conditions.
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Involvement of the putative anion transporter 1 (SLC26A6) in permeation of short chain fatty acids and their metabolites across the basolateral membrane of ovine ruminal epithelium: Involvement of the putative anion transporter 1 (SLC26A6) inpermeation of short chain fatty acids and their metabolites across thebasolateral membrane of ovine ruminal epitheliumAlameen Omer, Ahmed Omer 27 September 2016 (has links)
Introduction: Microbial fermentation of carbohydrates in forestomach of ruminants produces large amounts of short-chain fatty acids (SCFA, mainly acetic acid, propionic acid, and n-butyric acid). The majority of these substrates is taken up directly across the ruminal wall. After luminal uptake into the epithelial cells, SCFA mainly occur in the dissociated form due to the intracellular pH of ~7.4. Moreover, a big portion of SCFA is metabolised within the cytosol. Main end products of epithelial SCFA metabolism are ketone bodies (D-3-hydroxybutyric acid and acetoacetic acid) and lactic acid. Both intact SCFA and ketone bodies and lactate need to be efficiently extruded from the ruminal epithelial cells to prevent a lethal drop of intracellular pH and counteract osmotic load of the cytosol. All these substances are less lipophilic in comparison to the undissociated form of SCFA. Thus, dissociated SCFA (SCFA-) and their metabolites need Protein mediated mechanisms for the extrusion across the basolateral side of ruminal epithelium. One mechanism suggested to be involved in the extrusion of SCFA- across basolateral membrane of the ruminal epithelium is the monocarboxylate transporter 1 (MCT1). Functionally, MCT1 was first assumed to operate as proton-coupled transporter for monocarboxylates including SCFA. Nonetheless, a recent study found a bicarbonate dependent anion exchange mechanism which turned out to be sensitive to MCT1 Inhibitors at the basolateral side of the ruminal epithelium pointing to the ability of MCT1 to act as an anion exchanger. However, in these experiments the inhibition of MCT1 abolished bicarbonate dependent transport only by half. This suggests the involvement of further anion exchanger(s) in the transport of SCFA across the basolateral membrane of ruminal epithelium. Promising candidates to underlie this exchange are the putative Anion exchanger 1 (PAT1) and a transport protein designated „down-regulated in adenoma“ (DRA).
Materials and Methods: Sheep rumen epithelium was mounted in Ussing Chambers under short-circuit conditions. Radioactively labelled acetate (ac) was added to the serosal side. Serosal to mucosal flux of ac (Jsm ac) was measured with or without anion Exchange inhibitors (50 mM NO3- or 1 mM DIDS) or the MCT1 inhibitor p-hydroxy mercuribenzoic
acid (pHMB; 1.5 mM) in the serosal buffer solution. The inhibitors were added alone or in combination with each other. Furthermore, mucosal to serosal flux of radioactivelly labelled ac or butyrate (bu) (Jms ac, bu) was measured in the presence or absence of SO42-, Cl- or NO3- (50 mM respectively) as exchange substrate in the serosal buffer solution. Immunohistochemical staining was conducted to locate PAT1 and DRA by use of commercially available antibodies.
Results: NO3- and pHMB significantly reduced Jsm ac by 57 % and 51 %, respectively. When pHMB was applied after pre-incubation with NO3- an additional inhibition of Jsm ac was observed. Vice versa, NO3- further inhibited Jsm ac when epithelia were pre-incubated with pHMB before. DIDS had no inhibitory effect on SCFA flux. Serosal presence of SO42- or Cl- enhanced Jms ac significantly. Regarding bu, Cl- or SO4 2- also enhanced Jms bu significantly. The different anions available in the serosal buffer solution numerically enhanced Jms in the order of SO4 2- > Cl- for both ac and bu, which corresponds to the known affinity sequence of PAT1 and DRA. Immunohistochemistry revealed localization of PAT 1 in the stratum basale, whereas DRA was not detectable using this method.
Conclusions: Basically, this study supports the suggestion that MCT1 works as an Anion exchanger in ruminal epithelium. In addition, it clearly shows that there is at least one further anion exchanger involved in the basolateral extrusion of SCFA and their metabolites. The functional and immunohistochemical findings suggest that PAT1 holds a significant role in this respect.:1 Introduction 1
2 Literature Review 3
2.1 Importance of short-chain fatty acid production of ruminants 3
2.2 Apical uptake of short-chain fatty acids from the rumen 5
2.2.1 Apical uptake of undissociated SCFA from the rumen 6
2.2.2 Apical uptake of dissociated fatty acids from the rumen 8
2.3 Intraepithelial metabolism of short-chain fatty acids 9
2.4 Mechanisms for the basolateral discharge of the short-chain fatty acids 11
2.4.1 Basolateral extrusion of short-chain fatty acids in other gastrointestinal
tract epithelia
12
2.4.2 Basolateral extrusion of short-chain fatty acids in ruminal epithelium 14
2.4.3 Further candidate proteins for extrusion of SCFA- in exchange for HCO3
- 19
2.4.3.1 Putative Anion transporter 1 (PAT1 = SLC26A6) 19
2.4.3.2 Down-regulated in adenoma (DRA = SLC26A3) 21
2.4.3.3 Anion exchanger 2 (AE2 = SLC4A2) 22
2.5 Literature implications for this study 23
3 Materials and Methods 24
3.1 Animals 24
3.2 Ussing chamber studies 24
3.2.1 Buffer solutions 24
3.2.2 Preparation of ruminal epithelium 25
3.2.3 Incubation 25
3.2.4 Electrophysiological parameters 26
3.3 Experimental procedure 27
3.3.1 Determination of the unidirectional SCFA flux rate 29
3.4 Experimental Setups 30
3.4.1 Sensitivity of Jsm
ac
to inhibitors 30
3.4.1.1 Effect of nitrate and pHMB on Jsm
ac 30
3.4.1.2 Effect of DIDS, NO3
- and pHMB on Jsm
ac 31
3.4.2 Effect of the basolateral replacement of the anions on the extrusion of
SCFA
32
3.4.2.1 Effect of Cl- and NO3
- on Jms of acetate and butyrate 32
3.4.2.2 Effect of SO4
2- on Jms of acetate and butyrate 32
3.4.3 Effect of different anions available in the serosal solution on Jms of
acetate and butyrate
33
3.5 Immunohistochemistry 34
3.5.1 Preparation of the samples. 34
3.5.2 Fixation and staining of the samples. 34
3.5.3 Evaluation 35
3.6 Statistical analysis 36
4 Results 37
4.1 Inhibitors sensitivity 37
4.1.1 Effect of nitrate and pHMB on Jsm
ac 37
4.1.2 Effect of DIDS, pHMB and NO3
- on Jsm
ac 41
4.2 Effect of Cl- and NO3
- on Jms of acetate and butyrate 43
4.2.1 Effect of SO4
2- on Jms of acetate and butyrate 44
4.3 Effect of Cl-, NO3
- or SO4
2- when present in the serosal solution for 150 min 49
4.4 Immunohistochemistry 52
5 Discussion 54
5.1Ussing chamber experiments 56
5.1.1 Effect of Cl- and NO3
- on Jms of acetate 56
5.1.2 Effect of nitrate and pHMB on Jsm of acetate 57
5.1.3 Effect of DIDS, pHMB or NO3
- on Jsm of acetat 58
5.1.4 Effect of SO4
2- on Jms of acetate 59
5.1.5 Comparison between different anions as exchange substrate for the
basolateral extrusion of acetate
60
5.2 Immunohistochemistry 62
5.3 Comparison between basolateral extrusion of butyrate and acetate 62
5.4 Conclusions 64
6 Summary 66
7 Zusammenfassung 68
8 References 70
Ac Aknowledgements
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Dietary cation anion difference and acidified coproducts: effects on peripartum dairy cowsRezac, Darrel James January 1900 (has links)
Master of Science / Department of Animal Sciences and Industry / Barry J. Bradford / The transition from gestation to lactation requires numerous physiological and metabolic adaptations in order for the body to maintain relative homeostasis. For the modern dairy cow, the difficulty to meet these challenges is increased many-fold due to the large demand for energy and metabolites placed on the body by the high producing mammary gland. Milk fever or periparturient hypocalcemia can be defined as a failure of the calcium homeostatic mechanisms to maintain serum calcium around the time of calving. Though clinical cases may only arise in ≈ 5% of transition cows, subclinical rates are much higher. Animals suffering from even subclinical milk fever are much more susceptible to numerous other transition disorders. Preventing milk fever by formulation of the prepartum ration may be accomplished by decreasing the dietary cation anion difference (DCAD) which can be defined as the balance between positively and negatively charged ions in the diet. An experiment was designed to test 2 diets containing t products designed to deliver supplementary anions to the diet versus a control ration with no added anions. Total serum calcium and incidence of postpartum health disorders were not affected by prepartum dietary treatment. Though DCAD was drastically different between the control ration and the 2 anionic diets, the concentration of the strong cation potassium was low across all treatments which presumably prevented hypocalcemia with the onset of lactation. Though our diets contained low concentrations of potassium, many diets used by dairymen contain forages that are high in potassium and thus might benefit from the addition of anions.
An experiment of an unrelated nature was conducted to observe the effects of 2 diets containing wet corn gluten feed (46 or 56% of DM) as the primary energy substrate and tallgrass prairie hay (14 or 20% of DM) as the sole source of physically effective fiber versus a control ration containing alfalfa and corn silage. The 20% tallgrass prairie hay diet resulted in milk components and efficiencies similar to those of the control ration, but production and income over feed cost did not match that of the control ration in this situation.
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Supramolecular chemistry of small molecular fundamentals to drug–receptor applicationsWelideniya, Dhanushi Thathsara January 1900 (has links)
Doctor of Philosophy / Department of Chemistry / Christer B. Aakeroy / A family of bis-pyridine based pharmaceutical active ingredients were synthesized and co-crystallized with four iodoperfluoroalkanes. Thirteen new crystal structures that are driven by I‧‧‧N(py) halogen bonds, are presented and compared with that of their hydrogen-bonded analogues. Halogen bonded co-crystals exhibit two different structural arrangements, as opposed to layered architectures observed in hydrogen bonded co-crystals.
In order to explore the effect of aromatic stacking interactions on hydrogen and halogen bond driven co-crystallization process, we utilized a series of aromatic hydrogen and halogen bond donors in combination with bis-pyridine based pharmaceutical active ingredients. Aromatic stacking between the donor and the acceptor were limited, due to the lack of complementarity between the donor and the acceptor in terms of size, shape and geometry. In that case, homomeric interactions between the single components were translated into the structure of the binary co-crystals.
According to our charge calculations, similarly activated hydrogen and iodine atoms possess similar electrostatics. Therefore, we wanted to investigate the interchangeability of hydrogen bonds and halogen bonds by utilizing 2-aminopyrimidine as the backbone for C(sp)-H and C(sp)-I functionalities which makes self-complementary ribbons via NH‧‧‧N synthons. Our results show that the ethynyl proton is capable of acting as a synthon mimic of ethynyl iodine by interchangeable C(sp)-H‧‧‧N hydrogen bonds and C(sp)-I‧‧‧N halogen bonds.
We exploited the halogen bonding donor capability of iodo, bromo and chloro ethynyl functionalities towards a series of halide ions. Based on the grinding experiments these donors showed 90%, 70% and 50% success rates towards halides. Among the halides, chlorides exhibited the highest red shift compared to bromides and iodides.
We synthesized a series of cavitands functionalized with hydrogen bond donor and acceptor groups and studied their binding preferences towards a series of active ingredients. We have shown that suitably functionalized cavitands can act as carriers of active ingredients and especially, selective binding of aspirin is demonstrated using a two-point binding mode.
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Computational study of the molecular details of ion permeation across the formate-nitrite transportersAtkovska, Kalina 13 June 2016 (has links)
No description available.
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Anion-templated synthesis of functional interlocked architecturesHancock, Laura M. January 2011 (has links)
This thesis explores the use of anions in the design and construction of interlocked architectures for applications in anion recognition and sensing, and to function as molecular machines upon a given stimulus. Chapter One introduces the field of anionic supramolecular chemistry focusing on host-guest chemistry and directed self-assembly. A review of the recognition and sensing of anionic guest species is given before strategies for the construction of interlocked architectures are discussed, and the potential functions of these structures considered. Chapter Two details the development of a novel anion-templation route for the synthesis of macrocycles and rotaxanes. The versatility of this route in constructing new [2]rotaxanes is explored by varying several features of the macrocyclic component, with emphasis on creating the most powerful anion complexant. Proton NMR spectroscopy is used to probe the anion binding properties of the rotaxanes, and X-ray crystallography and MD simulations are used to rationalize anion binding trends. The possibility of synthesizing catenanes for anion recognition via this new synthetic route is also investigated. Chapter Three investigates the appendage of transition metal complexes to rotaxanes to create interlocked host architectures capable of sensing anions via luminescence spectroscopy. The incorporation of rhenium(I) and ruthenium(II) polypyridyl complexes into the macrocyclic and axle component of [2]rotaxanes are described, before the anion binding studies of these structures using ¹H NMR and luminescence spectroscopy are reported. Chapter Four describes the strategic synthesis of [2]rotaxanes designed to undergo molecular motion upon a given stimulus. Initially, the possibility of exploiting anions to stimulate the macrocyclic component of the [2]rotaxanes to translocate to a second station on the axle is investigated. The use of pyridine N-oxide as an integrated template for rotaxane formation is reported before the ability of these rotaxanes to undergo anion and pH driven molecular motion is explored. This chapter concludes with the construction of a calix[4]diquinone N-oxide containing [2]rotaxane capable of undergoing sodium- and barium-induced molecular pirouetting. Chapter Five provides synthetic procedures and characterisation details for compounds listed in this thesis. Chapter Six reports supplementary experimental information including titration protocols, X-ray crystal structures and MD simulations.
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Synthesis and study of frustrated oxide and mixed anion materialsClark, Lucy January 2013 (has links)
Mixed anion systems, such as oxynitrides and oxyfluorides, are an emerging class of interesting materials. The lower stability of mixed anion systems in comparison to oxide materials has had the consequence that this area of materials research is relatively less well explored. However, the development of new synthesis techniques has resulted in the preparation of many new mixed anion systems and so a detailed understanding of their structure and how this relates to their electronic and magnetic properties is necessary. Within this Thesis, several oxide, oxynitride and oxyfluoride systems are investigated with a particular focus on the magnetic behaviour of materials based on geometrically frustrated pyrochlore and kagome lattices. The Lu2Mo2O7 pyrochlore contains a geometrically frustrated network of vertex sharing Mo4+ (d2 S = 1) tetrahedra. Here, the solid state synthesis of Lu2Mo2O7−x is reported along with a discussion of the coexistence of two cubic pyrochlore phases that has been discovered in samples synthesised at 1600 ◦C. Powder neutron diffraction and thermogravimetric analysis have revealed that this two-phase behaviour originates from a miscibility gap between stoichiometric Lu2Mo2O7 and oxygen deficient Lu2Mo2O6.6. Magnetic susceptibility and muon spin relaxation measurements support the formation of a geometrically frustrated spin glass ground state in Lu2Mo2O7 with a spin freezing temperature Tf ∼ 16 K. Low temperature neutron diffraction has confirmed the absence of long range magnetic order and magnetic diffuse neutron scattering data have indicated the presence of competing nearest and next nearest neighbour antiferromagnetic exchange interactions in the spin glass state. The magnetic heat capacity of Lu2Mo2O7 follows a T2-dependence at the low temperatures, indicating that Lu2Mo2O7 is another rare example of an unconventional, topological spin glass, which is stable in the absence of significant chemical disorder. The magnetic properties of the oxygen deficient pyrochlore phase Lu2Mo2O6.6 are qualitatively similar to those of Lu2Mo2O7, but an increase in the spin freezing temperature Tf ∼ 20 K suggests that oxygen-vacancy disorder in Lu2Mo2O6.6 favours the onset of a glassy state at higher temperatures and enhances the degree of frustration. Oxynitride pyrochlores with the ideal composition R2Mo2O5N2 (R = rare earth) contain Mo5+ d1 S = 1 2 cations on the frustrated pyrochlore lattice and are thus ideal candidates to support exotic magnetic ground states. Here, the synthesis of oxynitride pyrochlores of the Lu2Mo2O7 system by thermal ammonolysis is discussed alongside powder neutron diffraction and susceptibility data that show no evidence for long range magnetic order and an absence of spin freezing down to at least 2 K despite the persistence of strong antiferromagnetic exchange (θ = −120 K). A comparison of the magnetic diffuse neutron scattering between the spin glass state of Lu2Mo2O7 and the oxynitride is given, which suggests that the majority of the magnetic scattering in the oxynitride system is inelastic. In addition, low temperature magnetic heat capacity shows an absence of magnetic phase transitions and a continuous density of states through a T-linear dependence down to 500 mK. [NH4]2[C7H14N][V7O6F18], diammonium quinuclidinium vanadium(III,IV) oxyfluoride or DQVOF, is a kagome bilayer system with a geometrically frustrated two-dimensional kagome network of V4+ d1 S = 1 2 cations and V3+ d2 S = 1 cations between the kagome layers. Here, low temperature magnetisation and heat capacity data are presented, which demonstrate that the interplane V3+ d2 cations are well decoupled from the kagome layers at low temperatures such that DQVOF is a good experimental realisation of a S = 1 2 kagome antiferromagnet. Despite significant antiferromagnetic exchange (θ = −60 K) within the kagome planes, muon spin relaxation data have confirmed the absence of spin freezing and the persistence of internal field fluctuations that are intrinsic to the kagome layers down to temperatures of 40 mK. The low temperature heat capacity of the V4+ kagome network follows T-linear behaviour down to the 300 mK, highlighting the absence of a spin gap in the low energy excitation spectrum of DQVOF. The low temperature magnetic study of DQVOF presented here thus strongly supports the formation of a gapless quantum spin liquid phase. In the final results chapter, a discussion of the anion ordering principles in oxynitride systems is given. A high temperature, high resolution neutron diffraction study of the oxynitride perovskite SrTaO2N has revealed that the partial anion order that results in segregated Ta-N zig-zag chains is stable up to 1100 ◦C. Furthermore, these anion ordering principles are extended to the d1 perovskite oxynitrides RVO2−xN1+x (R = La, Nd, Pr) in a variable temperature neutron diffraction study, which confirms that the anion chain ordering discovered in d0 SrTaO2N is robust to electron doping. The R = La analogue also provides an interesting example of a rhombohedral oxynitride perovskite phase which coexists with an orthorhombic phase over the 4−300 K temperature range of the neutron diffraction study.
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