Esta tese apresenta o estudo inédito da obtenção e caracterização de filmes finos de xiloglucanas obtidas de duas fontes diferentes, Hymenaea courbaril (HXG) e Tamarindus indica (TXG) sobre lâminas de Si/SiO2 e lâminas modificadas com grupos amino, assim como a aplicação desses filmes na imobilização da lectina concanavalina A (Con A) por medidas de elipsometria e microscopia de força atômica (AFM). A diferença na estrutura fina de cada XG influenciou na espessura e morfologia de seus filmes finos. Os oligômeros XXXXG presentes apenas na HXG favorecem as interações com a superfície, assim como já observado para interação entre XG-celulose [Lima e Buckeridge, 2001]. A imobilização de Con A foi realizada sobre filmes de carboximetilcelulose (CMC) de HXG, TXG e poli(metacrilato de metila) (PMMA), lâminas de Si/SiO2 e partículas poliméricas decoradas com polissacarídeo PMMA/CMC. A adsorção de Con A foi mais pronunciada sobre os filmes de CMC. As camadas de Con A formadas sobre HXG e TXG apresentam potencial utilização no reconhecimento e detecção de carboidratos para desenvolvimento de diagnósticos para algumas doenças, por não comprometerem o sítio de ligação específica da lectina na adsorção. No caso das partículas PMMA/CMC cobertas com uma camada de Con A, a alta estabilidade coloidal do sistema confere às partículas a possibilidade de explorar a propriedade de aglutinação específica da lectina no reconhecimento de carboidratos. A enzima hexoquinase (HK) foi imobilizada sobre dois diferentes tipos de partículas poliméricas decoradas com polissacarídeo, PMMA/CMC e poliestireno/quitosana (PS/CH). Na primeira, HK perdeu drasticamente sua atividade catalítica, ao contrário do observado quando a mesma enzima foi imobilizada sobre PS/CH, onde a HK manteve aproximadamente 50% de sua atividade enzimática, podendo ser armazenada em temperatura e pressão ambientes por 1 mês e ser reutilizada até 3 vezes. A estrutura da camada de hidratação e a composição química de cada um dos polissacarídeos (CMC ou CH) na superfície das partículas são diferentes, provocando diferenças na conformação das moléculas de HK quando imobilizadas sobre cada tipo de partícula. Medidas de forças de adesão utilizando as partículas poliméricas coladas na extremidade de cantilevers de AFM (Colloidal Probe Technique) permitiram medir as espessuras dessas camadas hidratadas de polissacarídeos nas superfícies das partículas PMMA/CMC e PS/CH, da ordem de (20 ± 10) nm e (35 ± 11) nm, respectivamente. Essas medidas de força também evidenciaram o potencial dos dois sistemas estudados (PMMA/CMC - Con A e PS/CH - HK) como métodos qualitativos para a detecção dos açúcares manose, glicose e frutose. / This thesis presents the study on thin film formation and characterization of xyloglucans extracted from two different sources, Hymenaea courbaril (HXG) and Tamarindus indica (TXG) onto Si/SiO2 wafers or amino-terminated wafers, as well as the application of these films as substrates for the immobilization of the lectin concanavalin A (Con A) by means of ellipsometry and atomic force microscopy (AFM). The difference in the fine structure of each XG exerted influence on film thickness and morphology. The oligomers XXXXG present only in HXG favor the interactions with the surfaces, as already observed for the interaction between XG-cellulose [Lima and Buckeridge, 2001]. Con A was immobilized onto films of carboxymethylcellulose (CMC), HXG, TXG and poly(methyl methacrylate) (PMMA), Si/SiO2 wafers and on polysaccharide decorated polymeric particles PMMA/CMC. The adsorption of Con A was more pronounced on CMC films. Con A layers formed on HXG and TXG present potential application in the recognition and detection of carbohydrates for diagnostic development, once the specific sugar binding site is not involved in the adsorption process. In the case of polymeric particles PMMA/CMC covered with a Con A layer, the high colloidal stability of the system confers to particles the possibility to explore the lectin property of specific agglutination with carbohydrates. The enzyme hexokinase (HK) was immobilized onto two different types of polysaccharide decorated polymeric particles, PMMA/CMC and polystyrene/chitosan (PS/CH). In the first one, HK drastically lost its catalytic activity. The same enzyme immobilized onto PS/CH kept approximately 50% of its enzymatic activity, even after storing under room temperature and pressure for 1 month. Moreover upon immobilizing HK could be reused up to 3 times. The structure of the hydration layer and the chemical composition due to the presence of each polysaccharide (CMC or CH) on the polymeric particle surface provided different environment, generating differences in the conformation of immobilized molecules of HK on each particle. Measurements of adhesion forces using the polymeric particles glued on the extremity of AFM cantilevers (Colloidal Probe Technique) allowed to measure the thicknesses of these hydrated polysaccharide layers on the surfaces of the PMMA/CMC and PS/CH particles as (20 ± 10) nm and (35 ± 11) nm, respectively. These force measurements had also evidenced the potential of the two studied systems (PMMA/CMC - Con A and PS/CH - HK) as qualitative methods for detection of the sugars mannose, glucose and fructose.

Atualmente, a avaliação das propriedades biomecânicas da córnea vem sendo considerada um parâmetro importante a ser determinado, uma vez que está relacionado a diversos procedimentos (diagnósticos e cirúrgicos) e oftalmopatias. Devido à complexa disposição de suas lamelas, o estroma corneal é considerado a camada que exerce maior influência sobre as propriedades elásticas da córnea. A busca por modelos experimentais no estudo das propriedades biomecânicas da córnea têm aumentado ultimamente, devido à dificuldade em se obter amostras de córnea humana para fins científicos. Logo, estudos comparativos entre a córnea humana e a suína vêm sendo desenvolvidos, e algumas similaridades foram identificadas entre estas duas espécies. O presente estudo tem como objetivo avaliar as propriedades biomecânicas de diferentes regiões da córnea suína por meio da microscopia da força atômica. Dezesseis bulbos oculares não escaldados, de oito animais da espécie suína, foram adquiridos em frigorífico local. Animais de diferentes raças, faixas de peso e idade foram utilizados neste estudo. Bulbos oculares frescos foram submetidos ao debridamento da camada epitelial da córnea, sendo posteriormente imersos em solução de dextran a 25%. Mensurações da paquimetria corneal em regiões central, superior, inferior, nasal e temporal foram realizadas em cada etapa do preparo das amostras. Após 24 horas submersas em solução de dextran, as córneas foram excisadas em fragmentos de aproximadamente 3 x 3 mm, conforme as regiões acima descritas. Tais fragmentos foram submetidos à avaliação pelo microscópio de força atômica, imersos em solução de dextran a 25%. Os valores do módulo de Young para cada fragmento foram obtidos com base no modelo de elasticidade de Hertz. O armazenamento de amostras de córnea em solução de dextran preveniu a hidratação excessiva destas, mantendo a paquimetria dentro dos valores considerados normais. Tanto a paquimetria quanto o módulo de elasticidade corneais não variaram dentre as regiões central, superior, inferior, nasal e temporal da córnea. A espessura e a elasticidade da córnea não diferiram frente à comparação de olhos contralaterais. Devido à facilidade de aquisição e aos resultados obtidos, a córnea suína pode ser empregada como modelo experimental na avaliação das propriedades biomecânicas corneais. / Currently, the assessment of corneal biomechanical properties has been considered an important parameter to be determined, since it is related to several procedures (diagnostic and surgical) and ocular diseases. Due to the complex arrangement of its lamellae, the corneal stroma is considered the layer that exert more influence on the elastic properties of the cornea. The demand for experimental models to study the biomechanical properties of the cornea has recently increased due to the difficulty in obtaining samples of human cornea for scientific purposes. Therefore, comparative studies between human and porcine cornea have been developed, and some similarities were identified between these two species. This study aims to evaluate the biomechanical properties of different regions of the porcine cornea using atomic force microscopy. Sixteen eyes, enucleated from eight animals, were purchased at a local slaughterhouse. Animals of different breeds, age and weight ranges were used in this study. Fresh eyeballs underwent debridement of the corneal epithelial layer, and subsequently immersed in 25% dextran solution. Measurements of corneal pachymetry in the central, superior, inferior, nasal, and temporal regions were performed at each stage of sample preparation. After 24 hours submerged in dextran solution, the corneas were excised into fragments of approximately 3 x 3 mm, according to the regions described above. These fragments were analysed by atomic force microscope immersed in 25% dextran solution. The values of Young modulus for each fragment were obtained from the elasticity model of Hertz. The storage of samples in dextran solution prevented their excessive hydration, keeping the pachymetry values within normal limits. Both corneal thickness and elastic modulus did not vary among the central, superior, inferior, nasal and temporal regions of the cornea. The thickness and elasticity of the cornea did not differ between right and left eyes. Due to the facility of acquisition and the results obtained, porcine cornea can be used as experimental model for assessment of corneal biomechanical properties.

Submitted by PPG Engenharia El?trica (engenharia.pg.eletrica@pucrs.br) on 2018-03-26T18:49:00Z No. of bitstreams: 1 MATHEUS_SENNA_OLIVEIRA_DIS.pdf: 2367932 bytes, checksum: 927039b4746ebdc5d7da25318435b24a (MD5) / Approved for entry into archive by Tatiana Lopes (tatiana.lopes@pucrs.br) on 2018-04-06T17:26:05Z (GMT) No. of bitstreams: 1 MATHEUS_SENNA_OLIVEIRA_DIS.pdf: 2367932 bytes, checksum: 927039b4746ebdc5d7da25318435b24a (MD5) / Made available in DSpace on 2018-04-06T17:38:56Z (GMT). No. of bitstreams: 1 MATHEUS_SENNA_OLIVEIRA_DIS.pdf: 2367932 bytes, checksum: 927039b4746ebdc5d7da25318435b24a (MD5) Previous issue date: 2018-01-31 / Coordena??o de Aperfei?oamento de Pessoal de N?vel Superior - CAPES / Este documento apresenta um trabalho de disserta??o sobre o estudo de estrat?gias de controle para o seguimento eficiente de padr?es espirais. Estes padr?es podem ser aplicados em muitas ?reas, como por exemplo, a Microscopia de For?a At?mica, onde padr?es de referenciais r?pidos e suaves s?o requeridos. Para realizar com sucesso o seguimento destas refer?ncias, que s?o compostas de sinais senoidais de amplitude e frequ?ncia vari?vel, estrat?gias de controle avan?adas foram investigadas. O Princ?pio do Modelo Interno ? uma abordagem tradicional para o seguimento de sinais, mas ele n?o pode ser aplicado diretamente em sinais com frequ?ncia variante. Logo, o presente trabalho prop?s uma estrat?gia de controle robusto onde o Princ?pio do Modelo Interno foi aplicado como um Controlador Ressonante em uma estrutura aumentada e variante no tempo. O sistema aumentado e os valores da frequ?ncia foram organizados usando uma representa??o polit?pica e estruturados como um problema de otimiza??o sujeito a restri??es na forma de Desigualdades Matriciais Lineares. Esta s?ntese foi avaliada atrav?s de um conjunto de simula??es, usando um modelo num?rico de um Microsc?pio de For?a At?mica e um novo padr?o de refer?ncia para escaneamento apropriado. Al?m disso, usando a premissa que estes sinais de refer?ncia s?o aplicados m?ltiplas vezes, um Controle por Aprendizagem Iterativa tamb?m foi projetado para melhorar o desempenho do seguimento da estrat?gia principal proposta. Resultados num?ricos demonstraram que o controlador projetado atingiu resultados satisfat?rios, em compara??o com o controlador tradicional dispon?vel na ?rea. / This document presents a dissertation work regarding the study of control strategies for the efficient tracking of spiral patterns. Such patterns arise in many areas, as for example the Atomic Force Microscopy, where fast and smooth reference signals are required. In order to successfully track the above mentioned references, which are composed of amplitude and frequency-varying sinusoidal signals, advanced control strategies were investigated. The Internal Model Principle is a traditional approach to track reference signals, but it cannot be directly applied in frequency-varying signals. Therefore, the present work proposed a robust control strategy where the Internal Model Principle was applied as a Resonant Control in an augmented time-varying structure. The augmented system and the reference frequency values were organized using a polytopic representation and structured as an optimization problem subject to constraints in the form of Linear Matrix Inequalities. This synthesis was evaluated through a set of simulations, using a numerical model of an Atomic Force Microscope and a new suitable scanning reference pattern. Moreover, using the premise that the same reference signals are tracked multiple times, an Iterative Learning Controller was also designed in order to improve the tracking performance of the proposed main strategy. Numerical results demonstrated that the designed controller achieved satisfactory results, in comparison to the traditional controller available in the area.

Neste trabalho, foram comparadas as cinéticas de adsorção da enolase (2-fosfo-D-glicerato hidrolase) sobre substratos hidrofílicos (placas de silício não modificadas ou silanizadas com aminopropilsilano (APS)) com aquelas sobre substratos hidrofóbicos (placas de silício silanizadas com trimetilclorosilano (TMCS) ou recobertas com filme de PS (poliestireno)). O efeito da forma do substrato (plano x esférico) sobre a cinética de adsorção também foi estudado. Os substratos esféricos foram esferas de vidro não modificadas (caráter hidrofílico) e silanizadas com TMCS (caráter hidrofóbico). As curvas de cinética de adsorção em substratos planos obtidas por elipsometria in situ mostraram que o processo ocorre em três etapas: (1) difusão das moléculas para a interface sólido/líquido, (2) formação de uma monocamada adsorvida e (3) adsorção de outras moléculas sobre a monocamada e formação de multicamadas. As isotermas mostraram que a enolase não possui adesão preferencial em substratos hidrofílicos ou hidrofóbicos. A etapa (1) pode ser descrita pelo modelo de adsorção seqüencial aleatória, enquanto que as etapas (2) e (3) podem ser descritas pelo modelo de adsorção seqüencial cooperativa. Não foi observada influência da força iônica. Contudo, imagens da topografia das superfícies recobertas por enolase obtidas por microscopia de força atômica (in situ e no ar) mostraram que os agregados de moléculas adsorvidas podem se apresentar na forma esférica (força iônica alta) ou como fibrilas (força iônica baixa). Medidas de espalhamento de raios-X a baixo ângulo (SAXS) de uma solução de enolase (6 g/L NaCl 0,001 mol/L) mostraram que as moléculas possuem raio de giro de 29 Å. Portanto, a agregação é induzida pelas propriedades da superfície da monocamada e pela força iônica do meio. Medidas de ângulo de contato mostraram que substratos inicialmente hidrofóbicos se tornaram hidrofílicos após adsorção da enolase, enquanto que os hidrofílicos apresentaram tendência oposta. Medidas de espectroscopia de fotoelétrons de raios-X evidenciaram que a adsorção sobre silício é mais rápida do que sobre PS, corroborando com os resultados obtidos por elipsometria. A influência do pH na adsorção da enolase em silício e APS mostraram que a adsorção é máxima quando o valor de pH é próximo ao ponto isoelétrico da enzima. A cinética de adsorção da enolase em substratos esféricos hidrofílicos e hidrofóbicos, acompanhada por espectrofotometria UV-vis, mostrou que a quantidade de material adsorvido O nestas superfícies aumenta com o tempo de adsorção e concentração inicial de enolase em solução (efeito de cooperativismo), sendo que o valor final é muito mais elevado nos substratos esféricos do que nos planos. Pela metodologia utilizada não se pôde observar os três estágios característicos da cinética de adsorção obtida para substratos planos. A influência da força iônica somente foi observada na adsorção sobre os substratos esféricos em sistemas concentrados (cenolase > 0,5g/L). As moléculas de enolase permanecem ativas após adsorção nos substratos estudados. / This work aimed to compare the adsorption behavior of enolase (2-phospho-D- glycerate hydrolase) onto hydrophilic (silicon wafers and amino-terminated surfaces (APS)) and hydrophobic planar substrates (polystyrene (PS) film, TMCS). The effect of the substrate shape (planar x spherical) was also studied. The spherical substrates were glass beads, native and modified with TMCS, with hydrophilic and hydrophobic characters, respectively. The adsorption kinetics of enolase onto planar substrates (obtained by means of in situ ellipsometry) presented three distinct regions: (i) a diffusion controlled step, (ii) monolayer formation evidenced by an adsorption plateau and (iii) continuous, irreversible and asymptotic increase of the adsorbed amount with time. The early stages were described by the random sequential adsorption model (RSA), while the cooperative sequential adsorption (CSA) model described regions (ii) and (iii). The adsorption isotherms show that enolase has no preferential adhesion onto hydrophilic or hydrophobic substrates. No significant influence of ionic strength was observed on the adsorption behavior of enolase onto the planar substrates. On the other hand, atomic force microscopy (AFM) showed that at long adsorption time and low ionic strength enolase monolayer induced fibrillation of the incoming molecules. Such effect was not observed at high ionic strength. Increasing the adsorption time, aggregates appeared on the surface, suggesting multilayer formation. Small angle X-ray scattering (SAXS) measurements of enolase (c = 6.0g/L) in NaCl 0.00 1 mol/L solution yielded radius of gyration of 29 Å, confirming that aggregation was probably induced by the surface of enolase monolayer and screening effects. Contact angle measurements showed that PS surfaces became hydrophilic and silicon surfaces turned hydrophobic after the formation of the enolase biofilm. XPS measurements showed that enolase adsorption is faster onto hydrophilic silicon wafers than onto hydrophobic PS fim, corroborating with the ellipsometric measurements. The study of the influence of pH on the enolase adsorption on silicon and APS surfaces showed that was the highest pH was close to the enzyme isoelectric point. The adsorption kinetic curves of enolase onto spherical substrates (obtained by means of UV-vis spectrophotometry) showed that the adsorbed amount (F) increased as function of adsorption time and initial concentration of enolase. The highest F value was obtained on spherical substrates. The three adsorption steps, characteristic of enolase adsorption, could not be observed by means of the methodology used. The influence of ionic strength was observed only in concentrated enolase solutions (cenolase 0.5g/L). The immobilized enolase molecules kept their enzymatic activity, regardless the type of substrate.

by Lee, Chun-Sing. / Thesis (M.Phil.)--Chinese University of Hong Kong, 1999. / Includes bibliographical references (leaves 98-105). / Abstracts in English and Chinese. / Acknowledgements --- p.2 / Abstract --- p.3 / Table of Contents --- p.7 / List of Figures --- p.10 / List of Tables --- p.13 / Chapter Chapter 1 --- Introduction --- p.14 / Chapter 1.1. --- Ion implantation --- p.14 / Chapter 1.2. --- Scope of the thesis --- p.15 / Chapter Chapter 2 --- Background Theory --- p.17 / Chapter 2.1. --- Ion stopping --- p.17 / Chapter 2.2. --- The energy-loss process --- p.17 / Chapter 2.3. --- Kinematics of binary elastic collision --- p.20 / Chapter 2.4. --- Nuclear and electronic stopping --- p.21 / Chapter 2.5. --- Radiation Damage --- p.22 / Chapter 2.6. --- Spikes --- p.24 / Chapter 2.7. --- Topography of ion bombarded surface --- p.26 / Chapter Chapter 3 --- Equipment Reviews --- p.31 / Chapter 3.1. --- Metal Vapour Vacuum Arc Ion Source Implanter --- p.31 / Chapter 3.2. --- Atomic Force Microscopy --- p.34 / Chapter 3.3. --- Rutherford Backscattering Spectrometry --- p.37 / Chapter 3.4. --- X-ray Diffraction --- p.40 / Chapter Chapter 4 --- Study of Ion Beam Implanted Germanium by Atomic Force Microscopy and Rutherford Backscattering Spectrometry --- p.43 / Chapter 4.1. --- Introduction --- p.43 / Chapter 4.2. --- Experiments --- p.45 / Chapter 4.3. --- Results and discussion --- p.47 / Chapter 4.3.1. --- AFM --- p.47 / Chapter 4.3.2. --- RBS and ion channeling --- p.64 / Chapter 4.4. --- Conclusions --- p.71 / Chapter Chapter 5 --- Ion Beam Synthesised Cobalt Germanide Alloy by Metal Vapour Vacuum Arc Implantation --- p.73 / Chapter 5.1. --- Introduction --- p.73 / Chapter 5.2. --- Experiments --- p.74 / Chapter 5.3. --- Results and discussion --- p.74 / Chapter 5.3.1. --- XRD --- p.74 / Chapter 5.3.2. --- AFM --- p.78 / Chapter 5.3.3. --- RBS and ion channeling --- p.82 / Chapter 5.4. --- Conclusions --- p.87 / Chapter Chapter 6 --- Tip Artifacts in Atomic Force Microscope Imaging of Ion Bombarded Nanostructures on Germanium Surfaces --- p.89 / Chapter 6.1. --- Introduction --- p.89 / Chapter 6.2. --- Experiments --- p.90 / Chapter 6.3. --- Results and discussion --- p.90 / Chapter 6.4. --- Conclusions --- p.95 / Chapter Chapter 7 --- Conclusions --- p.96 / Bibliography --- p.98 / Publications --- p.105

Candidate active pharmaceutical ingredients (APIs) are routinely tested to determine such parameters as physical stability, chemical stability, and bioavailability. Preformulation analysis of APIs does not currently attemept to determine whether they will perform to an acceptable level once they have been formulated. In practice, the APIs are subjected to extensive in vitro testing of their performance in a formulation, combined with optimisation of the formulation. This formulation testing is both time-consuming and expensive. In the field of pulmonary drug delivery from dry powder inhalers (DPIs), the API has to be aerosolized effectively in order to penetrate the lunfs and reach its deposition target. In a conventional ternary DPI fromulation, the API is combined with carrier lactose and fine lactose particles. The inter-particle forces between these three components and the bulk properties of the formulation determine the structure of the formulation and the aerolization performance of the API. In this study, physicochemical properties of salbutamol base and several of its salts were investigated both quantitatively and qualitatively. The in vitro deposition characteristics of the formulated APIs were also determined. The relationship between these parameters and the deposition was analysed to establish if a rapid preformulation screening technique could be applied to the APIs with respect to predicting the deposition performance of the formulated API. A clear relationship between the deposition of the unformulated API and the formulated API was observed that could be exploited as a screening technique.

No description available.

Microbial infections of medical implants occur in 10% of the more than 20 million surgical procedures carried out annually in the United States. The additional treatments required to address these infections generate more than $11 billion in additional patient costs, increase recovery time, and decrease overall patient quality of life. As the population ages, the number of necessary and voluntary surgical procedures increases; The rate of infection increases proportionately. While treatments are available, the biofilm mode of growth confers resistance to antimicrobial therapies up to 500 times greater than that of planktonic microbes. Currently, the only guaranteed method of removing an established microbial implant infection is through surgical excision of the implant and surrounding tissues. While removing the original infection, additional colonization and pathogenesis may take place. This research explores the a priori assumption that a medical implant infection cannot occur unless a microbial cell is capable of adhering to the implant surface. From that assumption, the following sections will focus primarily on identifying the necessary and sufficient factors influencing microbial adhesion, discretizing those factors into measurable quantities, and developing methods by which those factors may be mitigated or eliminated. Following is a brief summary of each major topic treated within this research period. Development of a Benchmark System: We have characterized the interactions between Pseudomonas aeruginosa ATCC 10145 and Candida parapsilosis ATCC 90018 using a novel method of cellular immobilization, which emphasizes minimal chemical modification of the cell surface. This research describes the very different force-separation interactions seen between C. parapsilosis and both a common medical implant material (viz., silicone rubber) and a nascent P. aeruginosa biofilm grown on the same material. This study was the first step in developing an ab initio technique which may be used to determine the relative affinity of a microbial cell for an implant material surface. The Role of the Substrate: Microbial adhesion to a medical implant device involves two major components, being the microbe itself, and the substrate to which it adheres. Each of the two has specific and unique surface chemical and textural characteristics which, when combined, allow for microbial colonization and subsequent infection. The goal of this study was to identify correlations between the adhesive strength of Staphylococcus epidermidis to a variety of chemically and texturally distinct substrates, and common surface characterization parameters (e.g., surface roughness and water contact angle). Relationships to adhesive strength did not demonstrate statistically significant or consistent trends. To extend upon the correlation parameters, we have employed a Discrete Bonding Model, which characterizes the surface texture according to Mandelbrot fractal theory. Correlations between the adhesive strength and the observational scale show stronger relationships, indicating a significant contribution of the surface texture to a microbe's ability to colonize a surface. Finding a Surface That Cannot Be Touched: Historically, AFM force-separation curves demonstrating only repulsive behavior on extension of the piezoactuator have been largely ignored, in terms of quantitative modeling of the interactions. In bacterial systems, such behavior describes the majority of the force profiles recorded by the instrument. As a result of the former lack of study, the latter data sets have remained unanalyzed and unanalyzable. Building on existing mathematical models, we have developed an analytical method by which the point of zero separation between a surface (viz., the microbial cell wall) coated with a polymer brush and an AFM probe may be quantitatively identified.

"Bacterial infections persist as a public threat due to the ease by which bacteria adapt to commonly used antibiotics. In addition, bacteria on surfaces develop protective communities called biofilms that hinder the ability of antibiotics to completely eliminate the pathogens. The rapid development of bacterial resistance to antibiotics has made pharmaceutical companies reluctant to fund new antibiotics research. Hence, novel approaches to prevent and treat infections are needed. The development of infections can be divided into three steps: adhesion, invasion and multiplication. Antibiotics target at the latter two step and are prone to bacterial resistance as passive strategies. Bacterial adhesion to host cells/implanted medical devices is the first step leading to following invasion and multiplication. However, fundamental understanding of bacterial adhesion process is still lacking. The current studies are aimed to systematically investigate biological interactions between pathogenic bacteria and host cell, proteins and biomaterials with both macro and micro scale approaches. The macro scale methods include bacterial adhesion assay, viability studies, and thermodynamic modeling. The micro scale methods include direct adhesion force measurements, ultra surface visualization via atomic force microscopy (AFM) and surface structure modeling. Our work combines experiments and modeling aimed at understanding the initial steps of the bacterial adhesion process, focusing on two case studies: 1) Mechanisms by which cranberry can prevent urinary tract infections through interfering with bacterial adhesion; and 2) Design of anti-adhesive and antimicrobial coatings for biomaterials. We make direct adhesion force measurements between bacteria and substrates with an atomic force microscope (AFM), and combine such experiments with thermodynamic calculations, in order to develop a set of tools that allows for the prediction of whether bacteria will attach to a given surface. These fundamental investigations of the bacterial adhesion process help elucidate the underlying mechanisms behind bacterial adhesion, thus leading to improved clinical outcomes for a number of biomedical applications. "

"Polyelectrolyte multilayer (PEM) thin films prepared via the Layer-by-Layer (LbL) deposition technique are of special interest in this research. The purpose of this study is to replace current mechanical closure systems, based on hook-and-loop type fasteners (i.e. Velcro), with PEM thin film systems. The technique is simple, cheap, versatile and environmental friendly; as a consequence a variety of thin films can be easily fabricated. By proposing PEMs as non-mechanical and nanoscopic molecular closures, we aim to obtain hermetic sealing, good adhesive strength, and peel off ease. Atomic force microscopy (AFM) and colloidal probe techniques were used to characterize the morphology, roughness and adhesive properties of PEMs. AFM measurements were conducted in air, necessarily requiring careful control of ambient humidity. PEMs were formed by consecutive deposition of polyanions and polycations on a charged polyethylene terephthalate (PET) solid surface, the result of which was stable nanostructured films. By systemically varying the parameters of PEM build-up process: different combinations of polyelectrolytes, different numbers of bilayers (polyanion/polycation pairs), and miscellaneous types and concentrations of salts (NaCl, NaBr and NaF salts at 0.5 M and 1.0 M concentrations), the adhesion and morphology of PEMs were thoroughly investigated. The PEM thin films specifically investigated include poly(ethyleneimine) (PEI), poly(styrene sulfonate) (PSS), poly(allylamine hydrochloride) (PAH), poly(acrylic acid) (PAA), and poly(diallydimethylammonium chloride) (PDADMAC). Silica colloidal probes were utilized in the investigation, some of which were functionalized with COOH and/or coated with PEI-PSS. Silica colloidal probes were used in order to quantify interaction forces on the PEMs. A functionalized silica colloidal probe (a probe with COOH surface chemistry) and a silica colloidal probe coated with PEI-PSS were used to simulate PEM-PEM interactions. The results suggest that adhesion in the PEMs depend on the number of layers, the salt concentration and the salt type used during the build-up process, the environmental conditions where the adhesion force measurements were made, and the choice of probe. "