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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
121

Esporos de Bacillus subtilis como adjuvante vacinal. / Bacillus subtilis spores as a vaccine adjuvante.

Renata Damasio de Souza 09 October 2014 (has links)
Esporos de Bacillus subtilis apresentam propriedades adjuvantes, sendo capazes de aumentar a resposta humoral após a sua coadministração com antígenos misturados ou adsorvidos à sua superfície. Mas, para isso, é necessária a produção de esporos altamente purificados e com rendimentos elevados. Neste trabalho, realizamos com sucesso uma análise quantitativa das condições de esporulação e dos métodos de purificação, o que melhorou a reprodutibilidade do processo e a obtenção de amostras com elevado grau de pureza e rendimento. Avaliamos também as propriedades imunomodulatórias destes esporos, utilizando como antígeno modelo a proteína recombinante Gag-p24 do HIV-1. A coadministração, mas não a adsorção à superfície do esporo, aumentou a imunogenicidade do antígeno sem induzir efeitos deletérios após a administração parenteral em camundongos BALB/c e C57BL/6. Além de promoveram a ativação das APCs, os esporos interagem com receptores relacionados à imunidade inata, devido à ausência do efeito adjuvante em camundongos nocautes para TLR2. Esses resultados abrem perspectivas interessantes para a utilização de esporos como adjuvantes vacinais. / Bacillus subtilis spores have been shown to behave as vaccine adjuvants, promoting the increase of antibody responses after co-administration with antigens either admixed or adsorbed on the spore surface. Nonetheless, such specialized application requires highly purified spore preparations at high yields. In this work, we successfully performed a systematic quantitative analysis of sporulation conditions and spore purification methods, which improved the reproducibility of the process and the obtainment of samples with high purity and yield. Afterwards, we further evaluated the immune modulatory properties of these spores using a recombinant HIV-1 Gag-p24 protein as a model antigen. The co-administration, but not adsorption to the spore surface, enhanced the immunogenicity of that target antigen, without inducing deleterious effects, after subcutaneous administration to BALB/c and C57BL/6 mice. Besides promoting activation of antigen presenting cells, spores interact with receptors related to innate immunity, due to the absence of the adjuvant effect on TLR2 knockout mice. These results open interesting perspectives for the use of B. subtilis spores as vaccine adjuvants.
122

Role de protéines associées au cytosquelette bactérien / Role of proteins associated with the bacterial cytoskeleton

Rueff, Anne-Stéphanie 12 July 2011 (has links)
Le cytosquelette bactérien des homologues d’actine (protéines de la famille MreB) joue un rôle majeur dans la morphogénèse cellulaire. Des homologues de MreB sont retrouvés chez la plupart des espèces bactériennes non sphériques, où ils sont essentiels pour la viabilité cellulaire. Les bactéries à Gram-positif ont généralement plusieurs isoformes. L’organisme modèle Bacillus subtilis en possède trois : MreB, Mbl et MreBH, tous trois impliqués dans la détermination de la forme de la cellule. Le postulat actuel est une organisation, des complexes de synthèse du peptidoglycane, le long des parois latérales par les filaments hélicoïdaux des MreB-like. Cependant, les mécanismes moléculaires et les protéines effectrices impliqués dans cette fonction ne sont pas encore élucidés. Par analogie avec les rôles de l’actine eucaryote, des implications dans d’autres processus cellulaires cruciaux et la présence de partenaires protéiques sont également attendus pour les actines procaryotes. Afin d’explorer les rôles des protéines MreB chez B. subtilis nous avons généré, par des criblages génomiques double hybride chez la levure, un réseau d’interaction protéine-protéine centré sur MreB, Mbl et MreBH. Une vérification systématique et drastique de toutes les interactions obtenues lors des criblages a été réalisée afin d’éliminer les faux positifs. Les interactions identifiées révèlent des liens entre les protéines MreB-like et seize protéines issues de catégories fonctionnelles variées ou de fonction inconnue. Une étude exploratoire a été menée pour huit des protéines partenaires par des approches in silico et in vivo et nous a permis de sélectionner une seule interaction à caractériser plus en détail. Nous nous sommes principalement intéressés à l’interaction physique et directe entre MreB et DapL, une protéine essentielle vraisemblablement impliquée dans la voie de biosynthèse des précurseurs du peptidoglycane, par analogie à DapE d’E. coli. La caractérisation approfondie de DapL a confirmé son essentialité dans la synthèse du peptidoglycane. Bien que l’interaction MreB-DapL ait été confirmée biochimiquement, son rôle biologique exact n’a pas été élucidé. Cependant, nous avons mis en évidence d’autres interactions entre MreB et DapG, LysA et MurE, des enzymes également impliquées dans les étapes précoces de la synthèse du peptidoglycane. L’existence de telles interactions renforce le rôle du cytosquelette MreB de B. subtilis dans l’orchestration des machineries de synthèse de la paroi cellulaire. / Bacterial actin homologues (MreB proteins) play a major role in cell morphogenesis in non-spherical bacteria. The prevailing model postulates that helical, membrane-associated MreB-like filaments organize elongation-specific peptidoglycan-synthesizing complexes along the sidewalls. However, the mechanistic details, as well as the effector proteins of MreBs morphogenetic function, remain to be elucidated. MreB proteins are also involved in DNA segregation, cell polarity, cell motility and, by analogy to eukaryotic actins, possibly in other functions that require the targeting and accurate positioning of proteins and molecular complexes in the cell. Gram-positive bacteria usually have more than one MreB isoform. Our model organism, Bacillus subtilis, has three called MreB, Mbl and MreBH. To explore the roles of the MreB cytoskeleton in B. subtilis, we used genome-wide yeast two-hybrid screens to identify proteins that physically associate with MreB, Mbl and MreBH. Stringent specificity assays were systematically performed to remove false positives and confirm the specificity of all potential interactions identified in the screens. A protein-protein interaction network centered on the three MreBs was generated which includes 16 protein partners. This interaction network provides insights into the links of MreB proteins with proteins belonging to several functional categories as well as proteins of unknown function. An exploratory study was conducted in silico and in vivo for 8 of the partner proteins identified in the network and allowed us to select one interaction for a more in-depth analysis. We next focused in the physical interaction between MreB and DapL, an essential protein presumably involved in the early steps of peptidoglycan biosynthesis. The characterization of DapL confirmed its essential role in cell wall synthesis. The MreB-DapL interaction was confirmed biochemically and we showed that MreB also associates with other proteins involved in the synthesis of the PG precursors (DapG, LysA and MurE). Together, these results suggest that B. subtilis MreB orchestrates the PG biosynthetic cytosolic machineries to achieve and maintain its rod shape.
123

Régulation de MtlR, activateur transcriptionnel de l’opéron mtl de Bacillus subtilis, par le domaine EIIB du transporteur du mannitol / Regulation of the Bacillus subtilis mannitol operon activator MtlR by EIIB domain

Zouiyed, Houda 27 September 2012 (has links)
Chez Bacillus subtilis l’expression de l’opéron mtl pour l’utilisation du mannitol est contrôlé par MtlR. MtlR est un activateur transcriptionnel qui appartient à la famille des régulateurs DeoR composé d’un domaine HTH suivi de deux PRDs, un domaine EIIBGat et un domaine EIIAMtl-like.Le mécanisme général de la régulation de l’activité de MtlR est basé sur sa phosphorylation par des composants du PTS. La phosphorylation sur la Cystéine 419 du domaine EIIBGat par P~EIIAMtl a un effet négatif majeur sur l’activité de MtlR. Par conséquent, dans un mutant mtlF où EIIAMtl est délétée MtlR est constitutivement actif.Dans cette étude nous avons mis en évidence un nouveau phénomène de régulation de MtlR impliquant la protéine du PTS, EIIBMtl.Nous avons observé que lorsque on déléte l’opéron mtl ou EIIBMtl et EIIAMtl, l’activité constitutive de MtlR dans un mutant mtlF déjà observée est abolie d’où notre hypothèse que EIIBMtl aura un effet sur l’activité de MtlR. Par des expériences de double hybride nous avons montré une interaction directe, spécifique et bidirectionnelle entre les deux protéines EIIBMtl et EIIBGatEIIAMtl-like de MtlR. D’une manière comparable à la cellule où EIIBMtl est fusionnée à la protéine EIICMtl nous avons démontré que seulement la forme EIIBMtl fusionné à la perméase EIICMtl est capable d’activer MtlR mais nous avons également démontré que ce n’est pas EIICMtl qui est essentielle à l’interaction entre EIIBMtl et MtlR mais c’est le voisinage de la membrane qui est essentielle pour l’établissement de cette interaction et l’activation de MtlRUn modèle de régulation de l’activité du régulateur MtlR est proposé. Dans ce modèle l’induction de l’opéron mtl via l’activation de MtlR requiert la phosphorylation de PRDII de MtlR par P~His-HPr, la déphosphorylation de EIIBGat de MtlR par EIIAMtl et la présence de la forme non-phosphorylée de l’EIIBMtl qui est dominante en présence du substrat inducteur, le mannitol. Ainsi, l’EIIBMtl non-phosphorylée séquestre MtlR déphosphorylé sur sa cystéine 419 à la membrane, l’active et induit l’expression de l’opéron mtl. / The Bacillus subtilis mtl operon encodes the enzymes necessary for mannitol utilization. Its expression is controlled by MtlR, a transcriptional activator belonging to the DeoR family. MtlR contains a HTH domain followed by two PTS regulation domains (PRDs), an EIIBGat domain and an EIIAMtl-like domain.The general mechanism of the regulation of MtlR activity is based on its phosphorylation by components of the phosphoenolpyruvate: carbohydrate phosphotransferase system (PTS). The phosphorylation of EIIBGat on cysteine 419 by P~EIIAMtl has a major negative effect on the activity of MtlR. The absence of EIIAMtl in a mtlF mutant therefore leads to constitutively active MtlR.In this study a new mechanism of MtlR regulation based on the interaction of the PTS component EIIBMtl with MtlR is presented.We observed that the deletion of the entire mtlAFD operon or of mtlF and only the 3’-part of mtlA (encoding the EIIBMtl domain) abolishes the constitutive MtlR activity of the mtlF mutant, suggesting that MtlR activity depends on functional EIIBMtl. By carrying out yeast two-hybrid experiments we could establish a direct, specific and bidirectional interaction between EIIBMtl and the EIIBGatEIIAMtl-like part of MtlR.Complementation of the above mutants was possible with entire MtlA, but not with the EIIBMtl domain. EIIBMtl is normally fused to the membrane protein EIICMtl; we therefore fused EIIBMtl to another membrane, which indeed restored MtlR function in the absence of EIICMtl. The EIICMtl domain is therefore not essential for the interaction between EIIBMtl and MtlR; it is rather the vicinity of the membrane which is required for the activation of MtlR.A regulation model of MtlR activity is proposed. In this model, the MtlR-mediated induction of the mtlAFD operon requires the phosphorylation of PRDII by P~His-HPr and the dephosphorylation of EIIBGat by EIIAMtl. The presence of unphosphorylated EIIBMtl, which prevails when the inducer mannitol is present, is also required. Under these conditions unphosphorylated EIIBMtl sequesters MtlR dephosphoryled on cysteine 419, but phosphorylated at His-342, to the membrane thereby activating the transcription activator, which leads to increased expression of the mtlAFD operon.
124

Produção e ação de biossurfactante produzido por bactérias em meios salinos contaminados por hidrocarbonetos aromáticos / Production and action of biosurfactant produced by bacteria in saline media contaminated with aromatic hydrocarbons

Souza, Ellen Cristina 21 August 2013 (has links)
A contaminação da água e do solo por hidrocarbonetos aromáticos tem aumentado ao longo dos anos, devido ao seu uso nos mais diversos segmentos industriais. Hidrocarbonetos, tais como tolueno, são descritos como extremamente poluentes, tóxicos e potencialmente mutagénicos e carcinogénicos para os seres humanos. Os hidrocarbonetos são compostos lipófilicos difíceis de serem eliminados, contudo, estes aromáticos podem ser removidos de ambientes contaminados por meio de biorremediação utilizando bactérias produtoras de surfactante. Biossurfatantes são surfactantes principalmente produzidos por microrganismos, as quais promovem a quebra das moléculas de hidrocarbonetos, através da formação de micelas, aumentando a sua mobilidade, a biodisponibilidade e sua exposição à bactérias favorecendo a biodegradação do hidrocarboneto. A produção deste tensoativo exige meios de fermentação e oxigênio para o metabolismo microbiano. Por tanto, aeração e agitação são variáveis operacionais importantes para garantir um coeficiente de transferência de massa de oxigénio eficaz (kLa). Para esta finalidade, o kLa foi determinado experimentalmente em diferentes meios de fermentação, especificamente meio salino básico, meio de baixa salinidade, meio Bushnell-Haas e água do mar, por diversas variáveis operacionais. Ensaios foram realizados em agitador rotativo para selecionar, dentre os diferentes tipos de bactérias, nomeadamente Bacillus subtilis, Bacillus licheniformis e Bacillus megatherium, o melhor produtor de biossurfactante na presença de tolueno, nos meios de fermentação descritos acima, formulados com diferentes salinidades. A presença de tolueno inibiu o crescimento de microrganismo deslocando seu metabolismo para a produção de biossurfactante. Assim, B. subtilis foi capaz de reduzir a tensão superficial (TS) em 29,49 ± 0,55 unidades, produzindo cerca de 3,52 ± 0,06 mg/L de biossurfactante. Ao elevar o processo para um fermentador de bancada, a quantidade de tolueno no meio de baixa salinidade foi reduzido drasticamente após 12 horas de crescimento (de 45 ml para 7,43 ml), quando B. subtilis foi utilizado, reduzindo o TS em 22,6 unidades (com concentração de biossurfactante de 3,02 mg/L). Os resultados obtidos mostraram que o B. subtilis pode ser considerado um microrganismo promissor para ser utilizado na biorremediação de locais contaminados por tolueno / Contamination of water and soil by aromatic hydrocarbons has been increasing along the years, due to its use in various industrial segments. Hydrocarbons, such as toluene, are described as extremely polluting, toxic, potentially carcinogenic and mutagenic to humans. Hydrocarbons are lipophilic compounds difficult to be disposed of; however, the aromatic ones can be removed from contaminated environments via bioremediation using surfactant-producing bacteria. Biosurfactants are surfactants produced mainly by microorganisms, which promote the breaking of hydrocarbons molecules, by means of the formation of micelles, increasing their mobility, bioavailability and exposure to bacteria favoring hydrocarbon biodegradation. This tensoactive production requires oxygen and fermentation media for the microorganism metabolism. Thus, aeration and agitation are important operating variables to ensure an effective oxygen mass transfer coefficient (kLa). To this purpose, such a response was experimentally determined in this study in different fermentation media, specifically basal saline medium, low saline medium, Bushnell-Haas medium and sea water, and correlated with the above operating variables. Rotary shaker essays were performed to select, among different bacteria, namely Bacillus subtilis, Bacillus megatherium and Bacillus licheniformis, the best biosurfactant producer in the presence of toluene, in fermentative broths described above, formulated with different salinities. The presence of toluene inhibited the growth of microorganism shifting the metabolism to the production of biosurfactant. Thus, B. subtilis was able to reduce the surface tension (ST) in 29.49 ± 0.55 units producing up to 3.52 ± 0.06 mg/L of biosurfactant. Scaling up the process to a bench fermentor, the quantity of toluene in the low salinity medium was reduced drastically after 12 h of growth (from 45 mL to 7.43 mL), when B. subtilis was used, reducing the ST in 22.6 units (biosurfactant concentration of 3.02 mg/L). The results obtained showed that B. subtilis can be considered a promising microorganism to be used for the bioremediation of sites contaminated by toluene.
125

Bacillus subtilis GlpP protein, antitermination and mRNA stability

Glatz, Elisabeth. January 1998 (has links)
Thesis (doctoral)--Lund University, 1998. / Added t.p. with thesis statement inserted. Includes bibliographical references.
126

Bacillus subtilis GlpP protein, antitermination and mRNA stability

Glatz, Elisabeth. January 1998 (has links)
Thesis (doctoral)--Lund University, 1998. / Added t.p. with thesis statement inserted. Includes bibliographical references.
127

Biodeposição de CaCO3 em materiais cimentícios : contribuição ao estudo da biomineralização induzida por Bacillus subtilis

Vieira, Juliana Aparecida January 2017 (has links)
A indústria da construção civil é conhecida como umas das atividades econômicas que causam os maiores impactos ambientais desde o processo de extração da matéria prima até a produção dos produtos, incluindo o transporte e manutenção do ambiente construído. A produção de um dos seus principais componentes, o cimento, é o maior contribuinte para a emissão de gases de efeito estufa, principalmente devido a queima de combustíveis fósseis. Por este motivo, pesquisas na área de biotecnologia sustentável são conduzidas para diminuir e até mitigar os efeitos danosos provocados pelos fatores que compõem a construção civil. Dentre estas pesquisas destacam-se as que se baseiam na Biomimética, que é uma ciência que busca na Natureza as soluções tecnológicas para os problemas que os desenvolvimentos humanos geralmente apresentam: a geração de resíduos poluentes, uso de produtos químicos tóxicos e processos que operam com energia e pressão elevadas. Com base nos conceitos biomiméticos, este trabalho se propôs a estudar a biomineralização, que é um processo que ocorre na Natureza a milhares de anos e é responsável pela formação de muitas estruturas biomineralizadas tanto no ambiente terrestre como aquático. A biomineralização é um fenômeno provocado pela ação de diversas espécies de microrganismos que durante o processo de obtenção de energia reciclam minerais presentes no solo e na água e os precipitam na forma de sais inorgânicos. Este material precipitado age como agente ligante de partículas como no caso de formações geológicas (estromatólitos) ou exoesqueletos de animais marinhos, por exemplo. Neste estudo foi avaliado a biomineralização por biodeposição de carbonato de cálcio precipitado na presença da espécie de bactéria ureolítica (Bacillus subtilis) em ensaios em escala laboratorial utilizando corpos de prova de areia, argamassa e concreto. Os corpos de prova em areia e argamassa foram observados em MEV e EDS permitindo a identificação de células de microrganismos, formação de biofilme e provável formação de cristais de carbonato de cálcio na região de biofilme. Os corpos de prova de concreto foram utilizados para avaliar as consequências da biodeposição na absorção de água por capilaridade do material. Resultados indicam redução de 20% na absorção de água por capilaridade. Com os resultados obtidos é possível concluir que a técnica de biodeposição pode ser uma alternativa ao tratamento superficial de estruturas de concreto, contudo requer estudos posteriores de aplicação técnica e viabilidade econômica. / The construction industry has been known as one of the economic activities that cause the major environment impacts since the process of raw material extraction until the products manufacturing including transport and maintenance of the built environment. The production of one of the main compounds, the cement, is the largest contributor to the greenhouse gas emissions, mainly due to burn fossil fuels. For this reason, researches in sustainable biotechnological area are conducted to minimize and even mitigate the damaging effects either promoted by construction industry factors. Among these ones, it stands out researches based on Biomimetic, which is a science that seeks in Nature the technological solutions for problems that human’s development usually presents: the generation of pollutant residues, the use of toxic chemicals and process that operates in high pressure and energy. Based on biomimetic concepts this research proposes to study the biomineralization, which is a process that has occurred in the Nature for thousands of years and it is responsible for the formation of many structures either in soil and water environments. The biomineralization is a phenomenon caused by several specimens of microorganisms that during the process of obtaining energy, they recycle minerals presents at soil and water inducing precipitation as inorganic salts. This precipitated material works as a binder of particles similar to geologic formations (stromatolites) or exoskeleton of sea animal for example. In this study the biomineralization was evaluated through biodeposition of precipitated calcium carbonate by specimen of ureolytic bacteria (Bacillus subtilis). Essays were held using samples made by sand, mortar and concrete. The samples made by sand and mortar were observed at MEV and EDS, allowing the identification of microorganism cells, biofilm formation and probable formation of calcium carbonate crystals at biofilm region. The concrete samples were used to evaluate the consequences of biodeposition on water absorption by capillarity of the material. The results show reduction of 20% on water absorption by capillarity. According the results achieved it possible to conclude that the biodeposition technique can be an alternative to superficial treatment for concrete structures. However, it will be required more studies to evaluate technical application and economical availability.
128

Identification of a new regulatory pathway for the K-State in bacillus subtilis / Identification d’une nouvelle voie de regulation du K-state chez Bacillus subtilis

Miras, Mathieu 28 April 2017 (has links)
Bacillus subtilis, une bactérie Gram-positive présente dans le sol, peut lorsque les nutriments sont en concentrations limitantes, sporuler, former des biofilms ou devenir compétente. La compétence est, chez B. subtilis, caractérisée par un arrêt de la division cellulaire, une tolérance aux antibiotiques et l'expression de plus d'une centaine de gènes. L'expression de la compétence, aussi désignée sous le nom de " K-state ", est dépendante de la synthèse du facteur de transcription ComK et se fait de façon stochastique résultant en la formation de deux sous-populations bactériennes, non-compétentes et compétentes. L'émergence, à partir de cellules génétiquement identiques, de deux sous-populations distinctes est une stratégie de survie très répandue chez les procaryotes, connue sous le nom de " bet-hedging ". Bien que les mécanismes de régulation du développement de la compétence ont, chez B. subtilis, largement été étudiés au cours des dernières années, la raison pour laquelle les souches non-domestiques sont très peu transformables (1-2% de la population) comparé aux souches domestiques (~15%) reste méconnue. Nous démontrons ici que c'est essentiellement dû à une mutation de transition dans le promoteur du gène degQ. Cette mutation diminue la synthèse de DegQ, protéine impliquée dans la régulation de la formation de biofilms, de la synthèse d'exoprotéases et de la transformation génétique. DegQ est une protéine impliquée dans le transfert d'un groupe phosphoryl entre la kinase DegS et son substrat DegU. Une faible quantité de DegQ diminue la concentration en DegU~P ce qui a pour conséquence la désinhibition de l'opéron srfA entrainant une accumulation de ComK et l'expression de la compétence. C'est ainsi que, dans les souches domestiques de B. subtilis, un plus grand nombre de bactéries atteignent le niveau nécessaire en ComK pour activer une boucle d'auto-activation transcriptionnelle de comK. Nous démontrons aussi que l'activation transcriptionnelle de srfA est, dans les souches non-domestiques, transitoire alors que la population bactérienne entre en phase stationnaire de croissance. Ces données indiquent que le développement de la compétence est moins fréquent et plus transitoire dans les souches non-domestiques de B. subtilis. De plus, cette limitation du K-state dans les souches non-domestiques est plus importante que précédemment " pensé " probablement dû à la domestication de B. subtilis au cours de ces 50 dernières années. Ce travail reflète non seulement, l'importance de l'utilisation de souches non-domestiques dans la caractérisation des voies de régulation de la compétence chez B. subtilis, mais aussi la portée du choix de modèle biologique dans l'étude de phénomènes biologiques complexes. / Bacillus subtilis, a Gram-positive soil bacterium, can enter into several developmental pathways such as sporulation, biofilm formation and competence development for DNA transformation when it becomes limited for essential nutrients. During competence, cells do not divide, are tolerant to antibiotics and competent cells express more than a 100 genes. The competent state has been named the K-state after its master regulator ComK. In B. subtilis, the entry into the K-state is stochastically determined by the activation of the transcription factor ComK and occurs, in the domesticated strains of B. subtilis, in approximately 15% of the population. The emergence from genetically identical cells of two distinct subpopulations (competent cells and non-competent cells) is known to be a classic survival strategy for bacteria, known as bet-hedging. Regulation of entry into the K-state has been intensively studied and is well understood; however, the reasons why undomesticated isolates of B. subtilis are poorly transformable compared to the domesticated strains remained unexplained. We show here that fewer cells enter the K-state, suggesting that some regulatory pathway limiting its expression has been lost in the domesticated backgrounds. We demonstrate that this is largely due to an inactivating point mutation in the degQ promoter region resulting in a decrease of the amount of DegQ. DegQ is known to stimulate phosphate transfer from the DegS autokinase to its cognate response regulator DegU. A low level of DegQ thus decreases the concentration of the phosphorylated form of DegU, leading to the de-repression of the srfA operon, which increases the amount of ComS leading to the stabilization of ComK. Thus, in domesticated strains of B. subtilis, more cells reach the concentration threshold of ComK needed to activate the positive auto-regulatory loop of ComK acting on its own promoter. We also show that the activation of srfA transcription in undomesticated strains is transient, as it is turned off when cells enter the stationary phase. Taken together, these data indicate that the K-state and transformability are less frequent and more transient in the undomesticated strains of B. subtilis. Consideration of the regulatory mechanisms and the fitness advantages and costs of the K-state must from now on take these features into consideration. These results underscore that our understanding of real-life biology requires the use of wild isolates.
129

Purificação e caracterização de protease queratinolítica produzida por linhagem probiótica de Bacillus subtilis / Purification and characterization of keratinolytic protease produced by Bacillus subtilis probiotic strain

Ferrareze, Patricia Aline Gröhs January 2015 (has links)
A hidrólise enzimática de penas residuais da indústria avícola constitui uma alternativa ao descarte irregular e uma fonte rica em aminoácidos para a produção de rações animais. A presença de queratinases em linhagens bacterianas probióticas, pode, concomitantemente, permitir um melhor aproveitamento de rações contendo queratina, devido a possibilidade de suplementação da dieta de animais monogástricos com tais microrganismos. Igualmente, proteases queratinolíticas possuem ampla utilização na indústria. Neste contexto, uma protease queratinolítica da linhagem probiótica FTC01PR01 de Bacillus subtilis foi purificada através de cromatografia líquida (Sephadex G-75 e DEAE Sepharose) e caracterizada por ensaio de proteólise em azocaseína com diversos interferentes, revelando uma serinoprotease com, aproximadamente, 31 kDa e atividade ótima a 60 °C em pH neutro e alcalino. Embora a enzima não seja termoestável, constatou-se que sua atividade é alterada na presença de íons manganês, apresentando estimulação em temperatura de 37 °C e aumento da termotolerância à 55°C. O crescimento do microrganismo em substratos queratinosos demonstrou eficiência para degradação de farinha de pena e penas brancas seguido por menor degradação de penas melânicas. Sendo constituído exclusivamente de α-queratina, o cabelo humano não sofreu proteólise. A enzima pode ser aplicada na indústria para a degradação de materiais recalcitrantes bem como a produção de ração animal. A efetividade do microrganismo in vivo para aumentar a digestibilidade da farinha de pena aliada a função probiótica, demanda mais estudos. / Enzymatic hydrolysis of waste feathers constitute an alternative to irregular disposal and a rich source of aminoacids for animal feed production. The presence of keratinases in probiotic bacterial strains may, concomitantly, allow better use of keratin-based feeds, due to the possibility of diet supplementation with beneficial microorganisms. In this context, a keratinolytic protease of Bacillus subtilis FTC01PR01 was purified by liquid chromatography (Sephadex G-75 and DEAE Sepharose) and characterized by azocasein proteolysis assay, revealing a serine protease with, approximately 31 kDa, and optimal activity at 60 ° C on neutral and alkaline pH. Although the enzyme was not thermostable, it’s activity was altered in presence of manganese ions, with stimulation at temperature of 37 °C and increased thermal tolerance at 55 °C. Microorganism growth on keratin substrates demonstrated efficiency for feather meal and white feathers degradation, followed by less degradation of melanized feathers. As a source of pure α-keratin, human hair was not degraded. The enzyme may be applied in industry for recalcitrant materials degradation and animal feed production. The effectiveness of the microorganism to increase the feather meal digestibility; ally to the probiotic function, demand further studies.
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Biofilmes e enzimas sintetizados no processo de degradação do tereftalato de polietileno (pet) por bacillus subtilis e phanerochaete chrysosporium

Alícia Maria Andrade Torres Jara 10 December 2007 (has links)
Coordenação de Aperfeiçoamento de Pessoal de Nível Superior / O Tereftalato de Polietileno PET é um termoplástico polar,com elevada estabilidade dimensional e temperatura de fusão, alta impermeabilidade a gases e resistência química a ácidos e solventes, empregado na fabricação de garrafas no Brasil. A biodegradação tem sido descrita como uma possível metodologia para reduzir o acúmulo de plásticos. Neste trabalho foi avaliado o desempenho das linhagens de Bacillus subtilis e Phanerochaete chrysosporium isoladamente na biodegradação do tereftalato de polietileno. Neste sentido, foram preparadas partículas do polímero sendo submetidas aos tratamentos com luz ultra violeta (6 e 36 horas) e temperaturas (35C e 50C) em seguida, foram colocadas nos meios caldo nutriente (B.subtilis) e Sabouraud (P. chrysosporium), incubados por 30 e 60 dias, incubados a 35C e 28C, respectivamente. Com a degradação das partículas observou-se que o pH passou de 5 para >8, com formação de biofilmes e indução da produção de enzimas (amilase, protease, esterase e polifenoloxidases). A formação do biofilme foi evidenciada por microscopia eletrônica de varredura. Os produtos metabólicos formados no meio de cultura foram avaliados pelo teste de toxicidade utilizando Artemia salina. A microscopia eletrônica demonstrou que B. subtilis colonizou completamente a superfície das partículas do PET, tanto nas condições controle (sem tratamento), como tratados. Os melhores resultados foram observados com o tratamento à temperatura de 50C, onde ocorreu alteração na superfície do polímero, perda da massa polimérica, permitindo maior colonização de ambos os microrganismos. As enzimas hidrolíticas foram produzidas pelos microrganismos em todos os tratamentos, em especial, à temperatura de 50C. Contudo, observou-se que B. subtilis não produziu polifenoloxidases. Os subprodutos da degradação do PET nas condições estudadas apresentaram alta toxicidade para Artemia salina no caso do P. chrysosporium e baixa toxicidade para B. subtilis. Os resultados obtidos sugerem o tratamento o prévio com a temperatura de 50C como importante para o processo de biorremediação / In recent years, the consumption of the poly ethylene terephtalate plastic - PET is used in the manufacture of bottles, comes increasing in Brazil. PET is a polar thermoplastic, with raised dimensional stability and temperature of fusion, high impermeability the acid gases and chemical resistance to solvents. The biodegradation has been described as a possible methodology to reduce the accumulation of plastics. In this work it was carried through the evaluation by Bacillus subtilis and Phanerochaete chrysosporium performance on the biodegradation of the polyethylene terephtalate. In this direction, particles of polymer were submitted to the treatments: exposition to ultra violet light (6 and 36 hours) and temperatures (35C and 50C), followed incubation with the microorganisms during 30 and 60 days. The polymer degradation process was accompanied by determination of pH, biofilm formation and the cells viability, enzymes detection (amylase, protease, esterase, and polyphenoloxidase), as well as the scanning electron microscopy of biofilm and toxicity tests. The results obtained observed the biofilm formation by Bacillus subtilis on polyethylene terephtalate surface particles. The treatment using the temperature of 50C demonstrated a higher alteration in the surface of the polymer, supported the colonization of the microorganisms followed of the hydrolytic enzymes production. It was observed that Bacillus subtilis does not produced polyphenoloxidase. The results indicated the temperature (50.C), induces the esterase production and it is related to degradation process. The P. chrysosporium produced esterases and polyphenoloxidase, whose enzymes had demonstrated to be involved with the polyethylene terephtalate degradation process, and were formed products with higher toxicities to Artemia salina

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