The piping plover (Charadrius melodus) is a federally-listed shorebird that nests on barrier islands along the U.S. Atlantic Coast and is highly vulnerable to habitat change and predation. We have addressed these two threats by 1) developing and implementing a linked model system that predicts future change to piping plover habitat resulting from sea-level rise and beach management efforts by joining dynamic models of sea-level rise, shoreline change, island geomorphology and piping plover nest habitat suitability, and 2) quantifying occupancy and movement of the red fox (Vulpes vulpes), a key shorebird predator at Assateague Island, Maryland and Virginia. We constructed and tested a model that links changes in geomorphological characteristics to piping plover nesting habitat suitability. We then linked this model to larger scale shoreline change resulting from sea level rise and storms. Using this linked model to forecast future sea-level rise and beach management efforts, we found that modest sea-level rise rates (3 mm and 4.1 mm/yr; similar to current rates) may increase suitable piping plover nesting habitat area in 50-100 years and some beach management strategies (beach nourishment and artificial dune modifications) also influence habitat availability. Our development and implementation of this tool to predict change in piping plover habitat suitability provides a vital starting point for predicting how plover nesting habitat will change in a context of planned human modifications intended to address climate change-related threats. Our findings regarding red fox occupancy and movement complement the use of this model for planning future management actions by providing vital information on the effects of certain predator management activities and habitat use of a key mammalian predator, the red fox, for shorebirds along the U.S. Atlantic Coast. Overall, we found that 1) red fox occupancy was strongly tied to eastern cottontail (Sylvilagus floridanus) trap success, increasing sharply with increased eastern cottontail trap success, 2) red fox occupancy did not change in response to an intensive eradication program, and 3) red foxes in our study area generally moved little between camera stations spaced 300 m from each other, but may move large distances (> 6km) at times, likely to occupy new territory available after lethal control efforts. Our findings have important ramifications for the sustainability of long-term predator removal programs and our understanding of future habitat change on the red fox. For example how vegetation changes affect eastern cottontails, how resulting fluctuations in eastern cottontails affect red fox occupancy, and how consequential changes in red fox occupancy affect plover breeding productivity. Our predictive model combined with these predator findings will allow wildlife managers to better plan and implement effective management actions for piping plovers in response to the multiple stressors of SLR-induced habitat change and predation. / Ph. D.

Beaches and coastal environments are dynamic, constantly shaped and reshaped by natural processes and anthropogenic modifications. The morphodynamics and influence of natural and anthropogenic factors of two different coasts at various temporal and spatial scales are discussed. To quantify the performance of several beach nourishment projects at annual temporal and kilometer spatial scales on three adjacent microtidal low-wave energy barrier islands in west-central Florida, a total of 5,200 beach and nearshore-profiles spaced at 300 m were surveyed monthly to bi-monthly from 2006-2010. Beach nourishment performance is most significantly influenced by the interruption of longshore sediment transport by complex tidal-inlet processes. More specifically, the tidal-inlet processes influencing adjacent beach nourishment performance includes longshore transport interruption resulting from divergence induced by wave refraction over an ebb-tidal shoal, flood-tidal currents along the beach, and total littoral blockage by structured inlets. A morphologic indicator of a large longshore transport gradient within the study area is the absence of a nearshore sandbar. These non-barred beaches are characterized by persistent shoreline erosion and were almost exclusively located in areas with a large longshore transport gradient. The more typical beach state along the three barrier islands was one exhibiting a migratory bar and relatively stable shoreline. The presence of a sandbar indicates the dominance of cross-shore processes, with onshore migration during calm wave conditions and offshore migration during energetic wave conditions. The onshore and offshore migration of the sandbar is closely related to non-stormy summer and stormy winter seasonal beach changes, respectively. The morphodynamics of a mixed sand and gravel beach in Delaware were investigated based on 740 beach profiles surveyed almost monthly from 2009 to 2011, 60 sediment cores, and 550 surface sediment samples collected at various alongshore and cross-shore transects. Inter-seasonal temporal scales of storm-induced beach changes and post-storm recovery were examined based on a hurricane, a typical energetic winter storm, and an extremely energetic storm resulting from the rare collision of a hurricane and winter storm ("Nor'Ida") occurring within a 3-month period in 2009. The mixed sand and gravel beaches in Delaware are characterized by monotonically increasing water depths lacking a sandbar under all wave conditions. A distinctive beach cycle was identified consisting of a built-up berm profile and depleted nearly-planar storm profile, with a time-scale related to the frequency and intensity of storm impact and duration of intra-storm recovery instead of simple seasonality. The sedimentological characteristics of the storm deposit associated with Nor'Ida demonstrated substantial cross-shore variation ranging from sandy-gravel and gravelly-sand within the storm swash zone (near the pre-storm dune edge) to well-sorted medium to coarse sand seaward of the storm swash zone, suggesting that storm deposits along mixed beaches demonstrate a variety of sedimentological characteristics. A new dynamic beach cycle model is proposed for the non-barred mixed sand and gravel beach with temporal variability controlled by storm occurrence and inter-storm duration.

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior / Dados sedimentológicos e hidrodinâmicos foram utilizados para estudar a dinâmica sedimentar da margem interna da restinga da Marambaia (baía de Sepetiba, Rio de Janeiro, SE Brasil). Foram realizadas três campanhas amostrais para coleta de sedimentos ao longo da restinga da Marambaia e na área submersa adjacente. Adicionalmente, em dezembro de 2013, três fundeios simultâneos para aquisição de dados hidrodinâmicos foram conduzidos paralelamente à restinga, ao longo da profundidade média de 6,5 metros. As medições abrangeram dois ciclos de maré (25 horas), incluindo perfilagem com CTDs, perfilagem correntométrica e coleta de amostras de água para determinação das concentrações do material particulado em suspensão. A partir do processamento das amostras de sedimentos em laboratório, foram obtidos os parâmetros estatísticos (média, desvio-padrão e assimetria) para o detalhamento da caracterização sedimentológica da área de estudo, bem como a aplicação de um modelo de tendência direcional de transporte de sedimentos (GisedTrend). A restinga apresenta areias médias e bem selecionadas, enquanto as amostras coletadas na porção submersa, em profundidades maiores que 2 m, passam de areias finas e bem selecionadas a siltes finos e mal selecionados em maiores profundidades. Quatro casos de tendência de transporte foram explorados em um total de 14 possibilidades e os mais significativos foram analisados com o intuito de identificar áreas de acumulação e remoção de sedimentos, podendo estar associados aos processos responsáveis pelo transporte de sedimentos, tais como correntes geradas pelos ventos locais, marés e dispersão de plumas de sedimentos em suspensão. Os dados hidrodinâmicos, durante o período amostrado, permitiram observar o complexo padrão de circulação existente, especialmente na área adjacente à área central da restinga. Dentre as observações realizadas, verificou-se a ocorrência de assimetria da maré, fato já documentado em trabalhos anteriores conduzidos próximo ao principal canal de acesso à baia, com períodos de enchente mais curtos e períodos de vazante mais longos. Diferentemente do que foi reportado nestes trabalhos, os períodos de vazante foram associados às correntes de maior intensidade. As concentrações de material particulado em suspensão situaram-se, em média, entre 10 e 20 mg/L tanto em superfície como próximo ao fundo; no entanto, suas variações temporais não apresentaram qualquer relação com as fases da maré. Possíveis áreas de convergência e divergência da circulação / células de transporte de sedimentos foram identificadas e comparadas aos vetores de tendência de transporte obtidos através do modelo GisedTrend, com resultados satisfatórios. / Sedimentological and hydrodynamic data sets have been used to study the sediment dynamics along the Marambaia barrier island bayside shoreline (Sepetiba bay, Rio de Janeiro state, SE Brazil). Three sampling campaigns were carried out to collect surface sediment samples along the barrier island and on the nearby submersed area. Additionally, in December 2013, hydrodynamic measurements were simultaneously conducted at three anchor stations positioned parallel to the barrier island, roughly along the 6.5 m isobath. The measurements, that spanned two full tidal cycles (25 hours), included water column profiling with CTDs, water column current profiling, and water column sampling to determine suspended-sediment concentrations. Once the sediment samples had been processed in the laboratory, statistical parameters (mean, sorting and skewness) were computed, allowing the thoroughful sedimentological characterization of the study area as well as the application of a grain-size trend analysis model (GisedTrend) to determine sediment transport trend vectors. The barrier island is chiefly made up of medium, well-sorted sands grading to fine, well-sorted sands and fine, poorly-sorted silts at greater depths. Four trend cases out of the 14 possibilities were explored and the most significant were further analyzed in order to identify areas of sediment accumulation or removal, and then be associated with the possible physical processes responsible for sediment transport, such as tidal currents, wind-generated currents and dispersal of sediment plumes. Hydrodynamic data documented that, over the time scale of the measurements, the water column circulation is highly complex, especially in the area adjacent to the center of the barrier island. As already verified in the area close to the main navigational channel, tidal asymmetry was documented, with floods being shorter than ebbs. However, contrarily to these previous observations, ebb currents were stronger than flood currents. Mean suspended-sediment concentrations (SSC) ranged between 10 and 20 mg/L both close to the surface and the nearbed area; yet, no relationship between SSC temporal variability and tidal stage could be identified. Possible convergence and divergence circulation / sediment transport cells were identified and compared to the GisedTrend output, with satisfactory results.

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior / Dados sedimentológicos e hidrodinâmicos foram utilizados para estudar a dinâmica sedimentar da margem interna da restinga da Marambaia (baía de Sepetiba, Rio de Janeiro, SE Brasil). Foram realizadas três campanhas amostrais para coleta de sedimentos ao longo da restinga da Marambaia e na área submersa adjacente. Adicionalmente, em dezembro de 2013, três fundeios simultâneos para aquisição de dados hidrodinâmicos foram conduzidos paralelamente à restinga, ao longo da profundidade média de 6,5 metros. As medições abrangeram dois ciclos de maré (25 horas), incluindo perfilagem com CTDs, perfilagem correntométrica e coleta de amostras de água para determinação das concentrações do material particulado em suspensão. A partir do processamento das amostras de sedimentos em laboratório, foram obtidos os parâmetros estatísticos (média, desvio-padrão e assimetria) para o detalhamento da caracterização sedimentológica da área de estudo, bem como a aplicação de um modelo de tendência direcional de transporte de sedimentos (GisedTrend). A restinga apresenta areias médias e bem selecionadas, enquanto as amostras coletadas na porção submersa, em profundidades maiores que 2 m, passam de areias finas e bem selecionadas a siltes finos e mal selecionados em maiores profundidades. Quatro casos de tendência de transporte foram explorados em um total de 14 possibilidades e os mais significativos foram analisados com o intuito de identificar áreas de acumulação e remoção de sedimentos, podendo estar associados aos processos responsáveis pelo transporte de sedimentos, tais como correntes geradas pelos ventos locais, marés e dispersão de plumas de sedimentos em suspensão. Os dados hidrodinâmicos, durante o período amostrado, permitiram observar o complexo padrão de circulação existente, especialmente na área adjacente à área central da restinga. Dentre as observações realizadas, verificou-se a ocorrência de assimetria da maré, fato já documentado em trabalhos anteriores conduzidos próximo ao principal canal de acesso à baia, com períodos de enchente mais curtos e períodos de vazante mais longos. Diferentemente do que foi reportado nestes trabalhos, os períodos de vazante foram associados às correntes de maior intensidade. As concentrações de material particulado em suspensão situaram-se, em média, entre 10 e 20 mg/L tanto em superfície como próximo ao fundo; no entanto, suas variações temporais não apresentaram qualquer relação com as fases da maré. Possíveis áreas de convergência e divergência da circulação / células de transporte de sedimentos foram identificadas e comparadas aos vetores de tendência de transporte obtidos através do modelo GisedTrend, com resultados satisfatórios. / Sedimentological and hydrodynamic data sets have been used to study the sediment dynamics along the Marambaia barrier island bayside shoreline (Sepetiba bay, Rio de Janeiro state, SE Brazil). Three sampling campaigns were carried out to collect surface sediment samples along the barrier island and on the nearby submersed area. Additionally, in December 2013, hydrodynamic measurements were simultaneously conducted at three anchor stations positioned parallel to the barrier island, roughly along the 6.5 m isobath. The measurements, that spanned two full tidal cycles (25 hours), included water column profiling with CTDs, water column current profiling, and water column sampling to determine suspended-sediment concentrations. Once the sediment samples had been processed in the laboratory, statistical parameters (mean, sorting and skewness) were computed, allowing the thoroughful sedimentological characterization of the study area as well as the application of a grain-size trend analysis model (GisedTrend) to determine sediment transport trend vectors. The barrier island is chiefly made up of medium, well-sorted sands grading to fine, well-sorted sands and fine, poorly-sorted silts at greater depths. Four trend cases out of the 14 possibilities were explored and the most significant were further analyzed in order to identify areas of sediment accumulation or removal, and then be associated with the possible physical processes responsible for sediment transport, such as tidal currents, wind-generated currents and dispersal of sediment plumes. Hydrodynamic data documented that, over the time scale of the measurements, the water column circulation is highly complex, especially in the area adjacent to the center of the barrier island. As already verified in the area close to the main navigational channel, tidal asymmetry was documented, with floods being shorter than ebbs. However, contrarily to these previous observations, ebb currents were stronger than flood currents. Mean suspended-sediment concentrations (SSC) ranged between 10 and 20 mg/L both close to the surface and the nearbed area; yet, no relationship between SSC temporal variability and tidal stage could be identified. Possible convergence and divergence circulation / sediment transport cells were identified and compared to the GisedTrend output, with satisfactory results.

Urban development and human encroachment on the natural habitats along the coastline of Florida combined with invasive exotic pressures have resulted in the fragmentation and degradation of habitat quality within Broward County. Native habitats have been significantly altered and fragmented to a fraction their previous size. With loss of habitat area and quality, isolation of breeding populations and anthropogenic pressures, it is important to determine species composition and habitat utilization in order to conserve the remaining biological diversity. It was the intent of this study to determine the small mammal species’ population structure and habitat utilization by season in the four sampled habitats. Previously undocumented species and/or extralimital populations were predicted prior to sampling. John U. Lloyd Beach State Park in Dania Beach, Florida is an understudied location for small mammals. This study surveyed four terrestrial habitats for small mammal species using live trapping and mark/recapture techniques. Data were collected monthly over the span of thirteen months to determine habitat use from maritime hammock, mangrove swamp, coastal dune and ruderal habitat types to determine species composition and mass of individual captures and recaptures. Trapping (3749 trap nights) produced twenty-four captures (including recaptures) in two of the four habitat types: maritime hammock and coastal strand. No animals were captured in the mangrove swamp or ruderal habitats, both of which were dominated by invasive Australian pine (Casuarina equisetifolia) monocultures. Post study, a large habitat restoration project restored the habitats impacted by invasive exotic flora. This survey serves as a baseline for small mammals in the park, documenting the pre-restoration habitat use and species composition. Future study to determine changes in species composition post-restoration is recommended.

The morphodynamics of an inlet channel draining an estuary or bay are governed by a complex system of temporally and spatially varying physical processes, including wind, waves, tides, sediment transport, and both tide and wave driven currents. In addition, sediment availability and characteristics in conjunction with underlying geologic framework bear on the morphology and morphologic behavior of an inlet system. This study examines the morphodynamics, sediment transport patterns and time-series morphologic change of John’s Pass and Blind Pass, two structured tidal inlets that collectively make up a dual-inlet system sharing the tidal prism of northern Boca Ciega Bay, in Pinellas County, Florida. To quantify wave and tidal forcing and response mechanisms an array of hydrodynamic sensors were deployed over a 12 month period at both inshore and offshore locations. In order to capture morphologic changes and quantify volumetric changes within the inlets, bathymetric surveys of the inlets were conducted in 2010, 2011, 2012, and 2014. Similarly, bi-monthly beach survey data for the same range of time was acquired in order to quantify volumetric changes along adjacent stretches of beach. In addition to gaining insights into sediment pathways based on morphologic and volumetric variability, those data were also used to develop a regional sediment budget along the studied stretch of coast. To gain insights into the morphodynamics of the dual-inlet system, bathymetric and hydrodynamic data was used to develop a numerical model of the dual inlet system. Numerical model simulations based on existing or baseline conditions were compared with numerical simulations employing synthetic bathymetric and hydrodynamic conditions in order to examine inlet behavior under a range of different morphological and hydrodynamic conditions. John’s Pass is the dominant of the two inlets. It exhibits mixed-energy straight morphology and captures ca 81% of the available tidal prism. The inlet has a well-developed mature ebb shoal, and actively bypasses sediment from one side of the inlet to the other supplying sediment to the downdrift littoral system. Blind Pass captures less than 20% of the available tidal prism, and while also exhibiting mixed-energy morphologic characteristics has a less well developed ebb shoal that currently has not fully established a sediment bypassing system. Both inlets channels and ebb shoals have been dredged on multiple occasions to provide sediment for the nourishment of nearby chronically eroding stretches of beach. Dredge pits excavated along the distal margins of the ebb shoals are infilling at rates substantially slower than expected due to limited sediment transport along those regions of the ebb shoal, while inlet channel dredge pits infill at rapid and expected rates. The objective of this study was to characterize the morphodynamics of the dual-inlet system with the aim of identifying sediment pathways and bypassing mechanisms, and quantify a balanced regional sediment budget in order to design more sustainable approaches to inlet management.