The purpose of this study was to analyze the water quality of the micro-basin of Córrego da Areia Branca, through analysis of hydrologic (temperature, dissolved oxygen, pH, conductivity and clarity) and analysis of the benthic community of macroinvertebrates. Samplings were carried out at each fifth day in three distinctive sites of the micro-basin, from September 2005 to January 2006. The macroinvertebrates were identified at maximum level of family. It was carried out analysis of diversity and similarity to compare communities and Principal Component Analysis (PCA) of biotic and hydrologic factors. Seven families were found: Chironomidae, Tipulidae, Simuliidae, Psychodidae, Glossiphoniidae, Tubificidae and Lymnaeidae. The family Chironomidae was the most abundant in the three sites sampled. The origin (Site 1) showed the best water quality compared as the other sites due to riparian vegetation around. The Site 2, located at 500m from the origin, had decreased water quality, however, showed the highest diversity. The worst water quality was observed in Site 3 which had near zero dissolved oxygen coupled with the high conductivity values (average 537,2 S/cm). In such site, the taxons Chironomus, Psychodidae and Tipulidae were the most abundant. Conductivity and water clarity were the principal factors determining the low diversity of macroinvertebrates in the micro-basin. The findings of this study can be used as a baseline for further environmental monitoring for the future recovery of the Córrego da Areia Branca micro-basin. / Este trabalho teve como objetivo analisar a qualidade da água da microbacia do Córrego da Areia Branca por meio de análises de variáveis hidrológicas (temperatura, oxigênio dissolvido, pH, condutividade e transparência) e da composição da comunidade de macroinvertebrados bentônicos. Amostragens foram realizadas quinzenalmente no período de setembro de 2005 a janeiro de 2006 em três trechos distintos da microbacia, incluindo a nascente. Os macroinvetebrados foram identificados ao nível máximo de família. Foram efetuadas análises de diversidade e eqüidade para comparar as comunidades e Análise de Componentes Principais com os fatores bióticos e abióticos. Sete famílias foram amostradas: Chironomidae, Tipulidae, Simuliidae, Psychodidae, Glossiphoniidae, Tubificidae e Lymnaeidae. A família Chironomidae foi dominante nos três pontos de amostragens. A nascente apresentou melhor qualidade da água em relação aos outros dois trechos por apresentar vegetação ripária em seu entorno. O ponto 2, localizado a 500m a da nascente apresentou reduzida qualidade da água, entretanto, mostrou maior diversidade. O ponto 3 apresentou pior qualidade da água, com valores de OD próximos de 0 e condutividade média de 537,2 S/cm. Neste trecho, os táxons Chironomus, Psychodidae e Tipulidae foram os mais abundantes. A condutividade e a transparência da água foram os principais fatores determinando a baixa diversidade na microbacia. Os resultados deste estudo poderão servir como base para futuro monitoramento ambiental visando a recuperação da microbacia do Córrego da Areia Branca.

Les Taillis à Très Courte Rotation sont une culture destinée à produire des plaquettes de bois énergie. L'objectif de la thèse était d'étudier l'impact des TTCR sur le fonctionnement des sols et de proposer des indicateurs de qualité. Cinq prélèvements ont été effectués chaque printemps et automne entre 2010 et 2012 sur les sols de quatre couples de TTCR et bandes enherbées, d'une forêt alluviale et d'un agrosystème, localisés dans la vallée de l'Aisne. Les paramètres suivants ont été mesurés: matières organiques, carbone total, capacité d'échange cationique et éléments échangeables, phosphore disponible, minéralisation du carbone et de l'azote, biomasse, abondance et diversité des communautés lombriciennes, abondance relative et diversité des communautés fongiques et bactériennes, activités enzymatiques, caractérisations physiques et chimiques des matières organiques. 6 années après la mise en place des TTCR, les densités fongiques et lombriciennes, la respiration basale, l'activité laccase étaient plus élevées dans les TTCR par rapport à l'agrosystème. Ces modifications peuvent être reliées aux changements quantitatifs et qualitatifs des matières organiques (augmentation du C/N, diminution de l'indice hydrogène). L'azote et le phosphore semblent être limitant mais les retours importants et le turn over rapide de la MO viennent tamponner les fortes exportations. Ces mesures ont conduit à la définition d'indicateurs et aboutissent à la proposition de trois indices : fertilité, activité biologique, abondance et diversité des communautés biologiques. L'utilisation des courbes de réponses principales confirme l'effet positif des TTCR sur la qualité du sol, observée avec le calcul d'indices synthétiques / Short Rotation Coppices (SRC) are a crop system intended to produce energy wood chips. This thesis aimed at assessing the impact of SRC on soil functioning and proposing quality indicators. Five samplings were performed in spring and autumn between 2010 and 2012 on plots including four couples of SRC and grassland, an alluvial forest and an agrosystem, in the Aisne valley. The following parameters were monitored: organic matter, total carbon, cation capacity exchange, available phosphorus, carbon and nitrogen basal respiration, earthworm biomass, density and diversity, fungal and bacterial density and diversity, enzymatic activity, physical and chemical organic matter characterisations. 6 years after conversion to SRC, earthworm and fungal density, basal respiration and laccase activity were higher in SRC soil compared to conventional agrosystem. These changes can be linked to qualitative and quantitative organic matter evolutions (increase of the C/N ratio and decrease of hydrogen index). Nitrogen and phosphorus seemed to be limiting factors for SRC crop yields. However, soil nutrient return and the good turnover of organic matter can buffer strong exportations. The measured parameters led to indicator definition and proposition of three indices: fertility, biological activity, density and diversity of biological communities. Principal response curves confirmed the positive effect of SRC on soil quality as observed with synthetic indices calculation

A Mata Atlântica é considerada uma das grandes prioridades para a conservação de biodiversidade em todo o continente americano. Este bioma é um dos oito hotspots do planeta e caracteriza-se pelo alto grau de endemismo e pela alta diversidade de espécies que encerra. As abelhas Euglossini estão restritas à região Neotropical, com uma faixa de distribuição que se estende desde o Norte do México até a província de Córdoba, na Argentina. As espécies dessa tribo são abundantes em florestas tropicais úmidas/chuvosas e florestas subtropicais da América Central e América do Sul onde ocorrem em maior diversidade. Em virtude do alto impacto causado pelas ações humanas em áreas de Mata Atlântica e o pouco que se conhece sobre sua diversidade, este trabalho propõe um estudo geral sobre a estrutura das comunidades de espécies de Euglossini presentes em uma área de planície litorânea continental, Parque Estadual da Serra do Mar - Núcleo Picinguaba (PESM), e uma área insular, Parque Estadual da Ilha Anchieta (PEIA), no município de Ubatuba, norte de São Paulo, Brasil. O PESM abrange uma área de aproximadamente 47.500 hectares e quase todos os ecossitemas da Mata Atlântica são encontrados em seus domínios. O PEIA cobre toda a extensão da Ilha Anchieta (828 hectares), distante cerca de 600 m do continente. As coletas foram realizadas mensalmente, de Agosto/2007 a Julho/2009, com o uso de 14 compostos aromáticos utilizados como iscas artificiais para a atração de machos, além de indivíduos coletados em flores. Mil quinhentos e setenta e seis espécimes (73 fêmeas e 1503 machos), pertencentes a 24 espécies, foram registrados no presente trabalho. A espécie mais abundante foi Euglossa cordata (36,4%), seguida por Euglossa iopoecila (13,9%) e Euglossa sapphirina (13,3%). Dezoito espécies foram amostradas na Ilha Anchieta, sendo que quatro delas foram exclusivas desta área, ao passo que 20 espécies foram amostradas no PESM e seis delas foram registradas apenas neste local. Na Ilha Anchieta, Eg. cordata representou 63,2%, quase dois terços do total de espécies coletadas. Já em Picinguaba, Eg. iopoecila (23,0%) e Eg. sapphirina (21,0%) foram as duas espécies dominantes. A espécie Eg. iopoecila, a mais abundante na área continental, não foi registrada na llha e Eg. sapphirina, a segunda espécie mais frequente no PESM, foi representada apenas por nove indivíduos na Ilha Anchieta e por 200 em Picinguaba. Estes dados sugerem que essas duas espécies podem atuar como bioindicadores de ambientes preservados, como sugerido para outras espécies de Euglossini. Por outro lado, alguns autores evidenciaram que Eg. cordata é uma espécie favorecida por ambientes perturbados, o que pode estar associado à sua alta abundância na Ilha Anchieta. Dados de literatura mostram que há um sinal evidente de perturbação ambiental, além da perda de espécies, é a dominância de algumas espécies. A Ilha Anchieta apresenta um longo histórico de ocupação humana e diversas espécies de plantas e animais foram introduzidos em seus domínios. / The Atlantic Forest is considered as one of the highest priorities for the conservation of biodiversity in the American continent. This biome is one of the eight biodiversity hotspots in the world and is characterized by high species diversity and endemism. Euglossini bees are restricted to the Neotropics, with a geographic range that extends from northern Mexico to the Córdoba Province in Argentine. Species from this tribe are abundant in humid and rainy tropical forests and in sub-tropical forests of Central and South America, where their diversity is high. Due to the high impact caused by human activities in the Atlantic Forest and the poor knowledge on its biodiversity, in the present study we assessed the community structure of the Euglossini in a coastal lowland area: Parque Estadual da Serra do Mar - Núcleo Picinguaba (PESM); and in an insular area: Parque Estadual da Ilha Anchieta (PEIA), Ubatuba, both located in northern São Paulo State, Brazil. PESM has an area of approximately 47.500 ha and almost all ecosystems of the Atlantic Forest are found within its domains. PEIA covers all the extension of the Anchieta Island (828 ha), about 600 m away from the continent. Sampling was carried out monthly, from August 2007 to July 2009, using artificial baits with 14 aromatic compounds to attract males, as well as by collecting individuals on flowers. One thousand five hundred and seventy-six specimens (73 females and 1,503 males), represented by 24 species were recorded. The most abundant species was Euglossa cordata (36.4%), followed by Euglossa iopoecila (13.9%) and Euglossa sapphirina (13.3%). Eighteen species were sampled on Anchieta Island and four of them were exclusive to this area; whereas 20 species were sampled in PESM and six of them were only recorded there. On Anchieta Island, E. cordata represented almost two thirds of the total species collected (63.2%). In Picinguaba, E. iopoecila (23.0%) and E. sapphirina (21.0%) were the dominant species. E. iopoecila, the most abundant species in the continental area, was not recorded on the island, and E. sapphirina, the second most frequent species in PESM, was represented only by nine individuals on Anchieta Island and by 200 in Picinguaba. Results suggest that these two species may act as bioindicators of preserved environments, as suggested for other Euglossini species. However, some authors evidenced that E. cordata is favored by disturbed environments, which may be associated with its high abundance on Anchieta Island. Other studies show that an evident sign of environmental perturbation, besides species loss, is the dominance of some species. Anchieta Island exhibits a long history of human occupation and several plant and animal species were introduced there.

Le sol représente le support de la production agricole. A l’interface avec les autres compartiments de la biosphère, il remplit de nombreuses fonctions essentielles à la fourniture de services écosystémiques nécessaires au bien-être de nos sociétés. C’est aussi une ressource non renouvelable dont les propriétés physicochimiques et biologiques ont été altérées par le développement de l’agriculture intensive. La prise de conscience actuelle de cet état de fait a révélé la nécessité de définir de nouveaux modes de gestion adaptés à la préservation et à l’utilisation durable des sols. Elle a ainsi marqué l’entrée dans l’ère de l’agroécologie qui prône un modèle de production optimisant notamment les services rendus par la biodiversité afin de réduire le recours aux intrants et à l’utilisation d’énergie. Pour atteindre cet objectif, le développement d’une gamme d’indicateurs permettant d’évaluer les pratiques/systèmes agricoles en rendant compte de la qualité biologique du sol est donc indispensable. Cette thèse, dont l’objectif est de contribuer au développement de bioindicateurs microbiens de la qualité du sol, s’inscrit dans ce contexte agroécologique. Le choix de travailler sur les communautés microbiennes se justifie pleinement dans cette problématique car elles sont (i) présentes avec une forte densité et diversité dans tous les environnements, (ii) fortement impliquées dans le fonctionnement biologique et les services rendus par le sol, et (iii) elles répondent de façon très sensible aux changements des conditions environnementales en termes de modification de biomasse, de structure/diversité et d’activité. Elles offrent donc un potentiel important en termes de développement de bioindicateurs. Ce travail a porté plus précisément sur l’évaluation de deux indicateurs complémentaires : (i) la biomasse moléculaire microbienne et (ii) la diversité taxonomique microbienne. Dans une première partie nous avons éprouvé la robustesse de ces deux indicateurs en évaluant les biais associés à chacune des étapes techniques des procédures mises en œuvre pour leur mesure. Nous avons ensuite utilisé ces deux indicateurs dans différents contextes agronomiques pour évaluer leur pertinence. Un premier travail a ainsi consisté à suivre la réhabilitation du patrimoine microbien, par l’implantation d’une culture à vocation énergétique, d’un sol pollué irrigué pendant une centaine d’années par des eaux usées. Une seconde application a porté sur l’étude de l’impact de différentes pratiques agricoles sur les communautés microbiennes selon l’intensité du travail du sol (labour vs. travail réduit), la gestion des résidus de culture (export vs. restitution), et le type de culture (annuelle vs. pérenne).Les résultats montrent que la biomasse moléculaire microbienne et la diversité taxonomique obtenue par séquençage massif sont deux bioindicateurs robustes et sensibles pour décrire la qualité microbiologique des sols agricoles dans des contextes très variés. Ces deux indicateurs permettent de mettre en évidence aussi bien des perturbations des sols que l’impact positif de pratiques innovantes. Ils peuvent donc représenter des outils performants pour l’évaluation des systèmes agricoles, aidant à une amélioration de leur mode de gestion et, à long terme, permettant une utilisation durable des ressources fournies par ces sols. / Soil is the support of agricultural production. It performs many functions essential to the provision of ecosystem services necessary for the well-being of our societies. Soil physicochemical and biological properties have been altered by the development of intensive agriculture while it is a non-renewable resource, revealing the need to develop new management practices suitable for the sustainability of soil quality. This also marked the entry into the “Agroecology” era, which promotes the development of new agricultural systems optimizing services provided by biodiversity to reduce the use of inputs and energy use. To achieve this aim, the development of a range of indicators to assess the impact of agricultural practices on the biological quality of the soil is essential. This thesis, which aims to contribute to the development of microbial bio-indicators of soil quality, is a part of this agroecological context. The choice to work on microbial communities is fully justified because they are (i) present with a high abundance and diversity in all environments, (ii) heavily involved in biological functioning and the soil ecosystem services, (iii) they respond very sensitive to changes in environmental conditions in terms of biomass, diversity and activity. They therefore have significant potential in terms of bio-indicators of development. This work has focused specifically on the evaluation of two complementary bioindicators: (i) the microbial molecular biomass and (ii) the microbial taxonomic diversity. In a first part we tested the robustness of these two bioindicators by assessing the biases associated with each of the procedure technical steps used for their measurement. We then used these bioindicators in different agricultural contexts to assess their sensitivity. A first work has followed the rehabilitation of microbial patrimony of a polluted soil irrigated for a hundred years by sewage, by implanting a bioenergy crop. A second application has focused on the impact of different agricultural practices on microbial communities depending on the intensity of tillage (tillage vs. reduced tillage), management of crop residues (export vs. restitution), and the crop type (annual vs. perennial). Results highlighted that microbial molecular biomass and microbial taxonomic diversity achieved by high throughput sequencing are both robust and sensitive bioindicators to describe the microbiological quality of agricultural soils in very different contexts. Both bioindicators allow evidencing soil disturbances but also the positive impact of innovative practices. They may therefore represent powerful tools for the assessment of agricultural systems, helping to improve their long term management, allowing a sustainable use of resources provided by soils.

Epigeických beetle communities were studied on four agroecosystems with different crops grown. All four agroecosystems were located in the vicinity of Czech Budejovice (South Bohemia). The first agroecosystem is conventionally grown corn. On the second one agroecosystem it was conventionally grown wheat. The third agroecosystem was barley and the fourth was permanent grassland. Individual agroekosystems differed not only in crops but also in agrotechnical operations during the capture. In all agroecosystems was for capture of the material used method of pitfall traps. Subsequently, those types have been studied. Then was studied degree of human impact on the biodiversity of species of different ecological groups found in these locations.Beetle activity was highest in the maize agroecosystem. There was found almost half of all captured individuals. In all agroecosystems was activity affected by management of agrotechnic operations and also by for that year specific weather. All sites were completely dominated by expansive species (E - types of deforested habitats strongly influenced by human activities)

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior / The successional processes in tropical forests follow a progression of stages during which forests have a gradual enrichment of species and an increase in structural and functional complexity. Stochastic actions resulted from the behaviour of the population s components and species define forest succession, where biotic and abiotic factors lead the ecological diversity strategies in a community according to local and regional environmental filters. Lichens are organisms with complex relationship within successional forest because they respond to spatial and temporal factors, and at the same time, are bioindicators of environmental quality. In this context, the present study aims to investigate the richness and species composition of corticicolous lichens along a gradient of forest succession in the Caatinga biome, and verify the possibility of using functional traits of lichens as indicators of successional stages of this type of vegetation. The study was undertaken in three areas of different successional stages in the Caatinga from Sergipe semiarid, in two municipalities. A total of 1460 samples were collected, distributed between the initial, intermediate and advanced stage areas. After the analysis, 119 species were identified, comprising 17 families and 47 genera. The richness differs between stages of succession, where the highest values are for the initial stage, followed by intermediate and later stages. Among the sampled environmental factors, the pH of the rainy season is the one that significantly affects species richness. Regarding species composition, there is a clear separation of stages, where the advanced stage differs from the initial and intermediate and are influenced by parameters such as bark pH, DAP of the tree, brightness, and elevation. The beta diversity is higher for the advanced stage, which has a more heterogeneous composition than the initial and intermediate, which share species among themselves. The functional traits presents a noticeable variation in the abundance and are bioindicators of stages of succession. Results show that the community of lichens respond to natural succession and is influenced by biotic and abiotic factors. Therefore, it is expected that this work will contribute to enhance the ecological knowledge of lichens in the Caatinga, serving as the starting point for complementary and innovative research that contributes to the conservation of this ecosystem. / Os processos sucessionais em florestas tropicais seguem uma progressão de estágios durante os quais as florestas apresentam um enriquecimento gradual de espécies e um aumento em complexidade estrutural e funcional. Ações estocásticas resultadas do comportamento dos componentes das populações e espécies definem a sucessão florestal, onde fatores bióticos e abióticos em uma comunidade conduzem as estratégias ecológicas de diversidade de uma determinada comunidade de acordo com filtros ambientais locais e regionais. Os liquens são organismos que possuem uma complexa relação sucessional dentro da floresta, pois respondem a fatores espaciais e temporais, e ao mesmo tempo, são bioindicadores de qualidade ambiental. Neste sentido, o presente estudo tem como objetivo analisar a riqueza e a composição de espécies de liquens corticícolas ao longo de um gradiente de sucessão florestal na Caatinga, e verificar a possibilidade da utilização de atributos funcionais de liquens como indicadores dos estágios de sucessão florestal neste tipo de vegetação. O trabalho foi realizado em três áreas de diferentes estágios sucessionais na Caatinga do Alto Sertão Sergipano, em dois municípios do estado. Foram coletadas 1460 amostras, distribuídas entre as áreas inicial, intermediária e avançada. Desse total, 119 espécies foram identificadas, compreendendo 17 famílias e 47 gêneros. A riqueza difere entre os estágios de sucessão, onde os maiores valores estão para o estágio inicial, seguidos pelo avançado e intermediário. Dentre os fatores ambientais amostrados, o pH do período chuvoso é o único que afeta a riqueza. Com relação à composição, há uma clara separação dos estágios, onde o estágio avançado se diferencia do inicial e intermediário e são influenciados pelos fatores pH, DAP, luminosidade, elevação. A diversidade beta é maior para o estágio avançado, que possui uma composição mais heterogênea em relação ao inicial e intermediário, os quais compartilham espécies entre si. Com relação aos atributos funcionais, é perceptível a variação da abundância e a correlação bioindicadora dos estágios de sucessão. Os resultados demonstram que a comunidade de liquens responde à sucessão natural e é influenciada por fatores bióticos e abióticos. Logo, espera-se que este trabalho venha contribuir para ampliar os conhecimentos ecológicos sobre os liquens na Caatinga, servindo como ponto inicial para pesquisas complementares e inovadoras que contribuam para a conservação deste bioma.

A Mata Atlântica é considerada uma das grandes prioridades para a conservação de biodiversidade em todo o continente americano. Este bioma é um dos oito hotspots do planeta e caracteriza-se pelo alto grau de endemismo e pela alta diversidade de espécies que encerra. As abelhas Euglossini estão restritas à região Neotropical, com uma faixa de distribuição que se estende desde o Norte do México até a província de Córdoba, na Argentina. As espécies dessa tribo são abundantes em florestas tropicais úmidas/chuvosas e florestas subtropicais da América Central e América do Sul onde ocorrem em maior diversidade. Em virtude do alto impacto causado pelas ações humanas em áreas de Mata Atlântica e o pouco que se conhece sobre sua diversidade, este trabalho propõe um estudo geral sobre a estrutura das comunidades de espécies de Euglossini presentes em uma área de planície litorânea continental, Parque Estadual da Serra do Mar - Núcleo Picinguaba (PESM), e uma área insular, Parque Estadual da Ilha Anchieta (PEIA), no município de Ubatuba, norte de São Paulo, Brasil. O PESM abrange uma área de aproximadamente 47.500 hectares e quase todos os ecossitemas da Mata Atlântica são encontrados em seus domínios. O PEIA cobre toda a extensão da Ilha Anchieta (828 hectares), distante cerca de 600 m do continente. As coletas foram realizadas mensalmente, de Agosto/2007 a Julho/2009, com o uso de 14 compostos aromáticos utilizados como iscas artificiais para a atração de machos, além de indivíduos coletados em flores. Mil quinhentos e setenta e seis espécimes (73 fêmeas e 1503 machos), pertencentes a 24 espécies, foram registrados no presente trabalho. A espécie mais abundante foi Euglossa cordata (36,4%), seguida por Euglossa iopoecila (13,9%) e Euglossa sapphirina (13,3%). Dezoito espécies foram amostradas na Ilha Anchieta, sendo que quatro delas foram exclusivas desta área, ao passo que 20 espécies foram amostradas no PESM e seis delas foram registradas apenas neste local. Na Ilha Anchieta, Eg. cordata representou 63,2%, quase dois terços do total de espécies coletadas. Já em Picinguaba, Eg. iopoecila (23,0%) e Eg. sapphirina (21,0%) foram as duas espécies dominantes. A espécie Eg. iopoecila, a mais abundante na área continental, não foi registrada na llha e Eg. sapphirina, a segunda espécie mais frequente no PESM, foi representada apenas por nove indivíduos na Ilha Anchieta e por 200 em Picinguaba. Estes dados sugerem que essas duas espécies podem atuar como bioindicadores de ambientes preservados, como sugerido para outras espécies de Euglossini. Por outro lado, alguns autores evidenciaram que Eg. cordata é uma espécie favorecida por ambientes perturbados, o que pode estar associado à sua alta abundância na Ilha Anchieta. Dados de literatura mostram que há um sinal evidente de perturbação ambiental, além da perda de espécies, é a dominância de algumas espécies. A Ilha Anchieta apresenta um longo histórico de ocupação humana e diversas espécies de plantas e animais foram introduzidos em seus domínios. / The Atlantic Forest is considered as one of the highest priorities for the conservation of biodiversity in the American continent. This biome is one of the eight biodiversity hotspots in the world and is characterized by high species diversity and endemism. Euglossini bees are restricted to the Neotropics, with a geographic range that extends from northern Mexico to the Córdoba Province in Argentine. Species from this tribe are abundant in humid and rainy tropical forests and in sub-tropical forests of Central and South America, where their diversity is high. Due to the high impact caused by human activities in the Atlantic Forest and the poor knowledge on its biodiversity, in the present study we assessed the community structure of the Euglossini in a coastal lowland area: Parque Estadual da Serra do Mar - Núcleo Picinguaba (PESM); and in an insular area: Parque Estadual da Ilha Anchieta (PEIA), Ubatuba, both located in northern São Paulo State, Brazil. PESM has an area of approximately 47.500 ha and almost all ecosystems of the Atlantic Forest are found within its domains. PEIA covers all the extension of the Anchieta Island (828 ha), about 600 m away from the continent. Sampling was carried out monthly, from August 2007 to July 2009, using artificial baits with 14 aromatic compounds to attract males, as well as by collecting individuals on flowers. One thousand five hundred and seventy-six specimens (73 females and 1,503 males), represented by 24 species were recorded. The most abundant species was Euglossa cordata (36.4%), followed by Euglossa iopoecila (13.9%) and Euglossa sapphirina (13.3%). Eighteen species were sampled on Anchieta Island and four of them were exclusive to this area; whereas 20 species were sampled in PESM and six of them were only recorded there. On Anchieta Island, E. cordata represented almost two thirds of the total species collected (63.2%). In Picinguaba, E. iopoecila (23.0%) and E. sapphirina (21.0%) were the dominant species. E. iopoecila, the most abundant species in the continental area, was not recorded on the island, and E. sapphirina, the second most frequent species in PESM, was represented only by nine individuals on Anchieta Island and by 200 in Picinguaba. Results suggest that these two species may act as bioindicators of preserved environments, as suggested for other Euglossini species. However, some authors evidenced that E. cordata is favored by disturbed environments, which may be associated with its high abundance on Anchieta Island. Other studies show that an evident sign of environmental perturbation, besides species loss, is the dominance of some species. Anchieta Island exhibits a long history of human occupation and several plant and animal species were introduced there.

Thesis (PhD)--University of Stellenbosch, 2011. / ENGLISH ABSTRACT: Land use change is leading to rapid biodiversity loss in terrestrial ecosystems worldwide. Ecological networks (ENs) are systems of remnant natural habitat which remain intact in a transformed matrix, and have been suggested as a means to mitigate the effects of habitat loss and transformation and the resulting loss of biodiversity. Conceptually, ENs are similar to habitat corridors but are larger in scale and more heterogeneous in their design and management. Like corridors, the efficacy of ENs for biodiversity conservation has been called into question and requires empirical investigation. South Africa boasts a unique system of extensive ENs associated with exotic timber plantations, mostly within the highly endangered grassland biome and Indian Ocean Coastal Belt in KwaZulu-Natal Province, South Africa. In these regions, grasshoppers respond sensitively to management practices such as grazing, mowing and burning, justifying their a priori selection as an ecological indicator. In this study, I utilize grasshopper assemblages to determine the efficacy of ENs for biodiversity conservation and suggest guidelines for EN optimization. Specifically, I assess grasshopper assemblage sensitivity and robustness to habitat quality within ENs, congruence of grasshoppers with butterflies, and I identify indicator species which can be utilized by managers for EN assessment in future. I also perform a case study of isolated fragment utilization by a highly mobile generalist species, the bird locust, Ornithacris cyanea (Stoll, 1813) (Acrididae: Cyrtacanthacridinae). Grasshopper assemblages were sampled within ENs in two geographic regions (Zululand and the KwaZulu-Natal Midlands) and in two years (2007 and 2008) during the peak season of grasshopper abundance, late summer (February-April). Local-scale environmental variables relating to management practices and landscape-scale environmental variables relating to design of the ENs were quantified. Management practices explained, on average, two-thirds of the variability in grasshopper assemblages that could be explained, while design variables explained one-third. Grass height and the time since the last fire event were most consistently influential, while area, context, isolation, proportion of bare ground and proportion of forbs at a site, proved influential in some analyses but not others. This response was robust over time and among geographic regions. Grasshopper species richness and abundance were highly congruent with that of butterflies and did not differ among isolated fragments, connected corridors and reference sites, although they did differ among geographic regions. Not all grasshopper species responded similarly to ENs. There was a strong phylogenetic signal in species response to environmental variables, with the distribution of highly mobile families varying more among years. Linear, heavily disturbed power line servitudes had higher grasshopper abundance, and generalist species consistent with early successional assemblages. Reference sites had more graminivorous species and those with intermediate mobility. Three species of grasshopper were identified with IndVal and validated on an independently collected dataset as indicators of high habitat quality. A case study of the bird locust showed that populations of this highly mobile species were effectively isolated and undergoing anthrovicariance even at short distances. These results indicated that heterogeneous ENs supported diverse grasshopper assemblages, although movement among isolated fragments may have been limited. A grasshopper bioindication method for South Africa’s ENs is suggested and has great potential for assessment of a crucial and sensitive trophic layer within the ENs. This method should be field-tested and revised over time as grasshopper relative abundances and species compositions may change. Increased heterogeneity, simulation of multiple successional stages, and increased connectivity are expected to positively impact biodiversity, particularly of insect primary herbivores. Globally, ENs, if managed and designed appropriately, have potential to enhance biodiversity, particularly of smaller resident organisms which can utilize the ENs for movement and live within them. / AFRIKAANSE OPSOMMING: Veranderinge in grondgebruik lei tot ‘n vinnige verlies van biodiversiteit in terrestriële ekosysteme wêreldwyd. Ekologiese netwerke (ENs) is sisteme van oorblywende natuurlike habitat wat ongeskonde bly in getransformeerde matrikse, en is voorgestel as ‘n manier om die verlies aan biodiversiteit as gevolg van habitatverlies en transformasie te verminder. Konseptueel, is ENs soortgelyk aan habitat korridors, maar is groter in omvang en meer heterogeen in hulle ontwerp en bestuur. Soos korridors, is die effektiwiteit van ENs om biodiversiteit te bewaar bevraagteken, en vereis dit empiriese ondersoek. Suid-Afrika spog met ‘n unieke stelsel van uitgebreide ENs wat geassossieer is met uitheemse plantasies, meestal in die hoogs bedreigde grasveld bioom en Indiese Oseaan kusstrook in KwaZulu- Natal Provinsie, Suid Afrika. In hierdie streek reageer sprinkane sensitief op bestuurspraktyke soos beweiding, sny en brand. In hierdie studie het ek sprinkaan gemeenskappe gebruik om die effektiwiteit van ENs vir bewaring van biodiversiteit te bepaal en om riglyne te stel vir EN optimering. Spesifiek het ek sprinkaan gemeenskap sensitiwiteit en robustness tot habitat kwaliteit bepaal, oreenstemming tussen sprinkane en skoenlappers getoets, en het ek indikator species geïdentifiseer wat in die toekoms deur bestuurders gebruik kan word vir EN assessering. Ek het ook ‘n gevallestudie gedoen van geïsoleerde fragment benutting deur ‘n hoogs mobiele, algemene spesie, Ornithacris cyanea (Stoll, 1813) (Acrididae: Cyrtacanthacridinae). Sprinkaan gemeenskappe was versamel in twee geografiese gebiede (Zululand en die KwaZulu-Natal Midlands) en in twee jare (2007 en 2008) gedurende die seisoen van hoogste sprinkaan aktiwiteit, laat somer (Februarie – April). Plaaslike-skaal omgewingsveranderlikes met betrekking tot bestuurspraktyke en landskap-skaal omgewingsveranderlikes met betrekking tot die ontwerp van ENs is gekwantifiseer. Bestuurspraktyke verduidelik, gemiddeld, twee derdes van die variasie in die sprinkaan gemeenskappe, terwyl ontwerpveranderlikes een derde verduidelik. Grashoogte en tyd sedert die laaste brand was konsekwent invloedryk, terwyl area, konteks, isolasie, hoeveelheid kaal grond en hoeveelheid kruidagtige plantegroei invloedryk was in sekere analyses, maar in ander nie. Hierdie reaksie was konstant oor tyd en tussen geografiese gebiede. Sprinkaan spesies rykheid en hoeveelheid was hoogs kongruent met die van skoenlappers, en het nie verskil tussen geïsoleerde fragmente, verbinde korridors en verwysingsareas nie, maar hulle het verskil tussen geografiese streke. Nie alle sprinkaan spesies het soortgelyk gereageer tot ENs nie. Daar was ‘n sterk filogenetiese sein in spesies reaksies op die omgewingsveranderlikes, met meer variasie tussen jare in die verspeiding van hoogs mobiele families. Liniêre, hoogs versteurde kraglyn dienspaaie het hoer sprinkaan hoeveelhede gehad en algemene spesies wat geassosieer is met gemeenskappe in vroeë stadiums van suksessie. Verwysingsareas het meer graminivorous spesies gehad en spesies met intermediêre mobiliteit. Drie sprinkaan spesies is geïdentifiseer met IndVal en bevestig met ‘n onafhanklik versamelde dataset as indikators van hoë kwaliteit habitat. ‘n Gevallestudie op O. cyanea het aangedui dat populasies van hierdie hoogs mobiele spesie geïsoleerd is en dat hulle anthrovicariance ondergaan, selfs op kort afstande. Hierdie resultate dui aan dat heterogene ENs diverse sprinkaan gemeenskappe ondersteun, hoewel beweging tussen geïsoleerde fragmente dalk beperk is. Verhoogde heterogeneïteit, simulasie van verskeie suksessiewe fases en meer konnektiwiteit sal moontlik ‘n positiewe invloed op biodiversiteit hê, aangesien sprinkane verteenwoordigend was van insek primêre herbivore. Wêreldwyd, as ENs op ‘n gepaste manier bestuur en ontwerp word, het dit die potensiaal om biodiversiteit te bevorder. Dit is veral belangrik vir kleiner, plaaslike organisms wat ENs kan benut vir beweging en as leefhabitat. ‘n Sprinkaan bioindikasie metode vir Suid-Afrika se ENs is voorgestel en het groot potensiaal vir die assessering van ‘n belangrike en sensitiewe trofiese laag binne die ENs. Hierdie metode moet in die praktyk getoets word en hersien word oor tyd om veranderinge in sprinkaan relatiewe hoeveelhede en spesies komposisies in ag te neem.

A restauração ecológica visa o estabelecimento de ecossistemas semelhantes aos que originalmente ocupavam uma determinada área que foi degradada. Todavia, os resultados dos esforços envolvidos na restauração e no retorno dos processos ecológicos naturais são difíceis de serem medidos, pois faltam métodos apropriados. Os bioindicadores são ferramentas baratas e confiáveis para o diagnóstico das características ambientais e ecológicas, cujo princípio consiste em medidas simples de grupos biológicos especialmente sensíveis às mudanças no meio. Os Arthropoda que ocorrem no solo e na serapilheira, em especial as formigas, mediam processos ecológicos importantes e apresentam características que os tornam bioindicadores potenciais, mas seu uso ainda necessita de conhecimentos específicos. Assim, o presente estudo teve como objetivo testar o potencial indicador da comunidade de Arthropoda edáfico-epígea na restauração ecológica, com maior enfoque sobre as formigas. Foram avaliadas as comunidades de um gradiente sucessional formado por doze reflorestamentos com diferentes idades e três remanescentes florestais, localizados nas bacias dos rios Pardo e Mogi-Guaçu. O objetivo foi identificar quais os parâmetros que melhor refletem a resposta dessas comunidades ao desenvolvimento florestal. Os resultados indicaram que tanto a mirmecofauna como o restante da comunidade são influenciadas pelos estádios de desenvolvimento florestal. As comunidades variaram em composição e estrutura. A evolução das comunidades mostrou-se direcional, formando um padrão convergente de acordo com o avanço da sucessão. Os resultados indicaram forte efeito da sazonalidade e das técnicas de coleta na interpretação dos resultados. A comunidade edáfico-epígea encontrada no período seco mostrou-se especialmente sensível ao desenvolvimento florestal, enquanto a resposta da mirmecofauna foi mais evidente durante o período chuvoso. Os resultados indicaram também que as comunidades de diferentes regiões, Mogi-Guaçu e Ribeirão Preto, responderam ao processo sucessional, embora tenham apresentado diferenças na composição e no padrão de resposta. As análises com formigas classificadas em grupos funcionais indicaram que a resposta da mirmecofauna ao desenvolvimento florestal ocorre também no nível funcional. As mudanças nos padrões da comunidade e seus módulos estão relacionadas às mudanças nos filtros ambientais e à disponibilidade de nichos. Em conclusão, (1) a riqueza de espécies da fauna edáfico-epígea encontrada na serapilheira do período seco foi um bom preditor geral do desenvolvimento florestal; (2) a riqueza de grupos raros proporcionou o melhor modelo de prognóstico do estádio sucessional, indicando ainda que os reflorestamentos tendem a atingir patamares semelhantes aos encontrados nos remanescentes florestais por volta dos 27 anos após o plantio; (3) na comunidade edáfico-epígea, o avanço no desenvolvimento florestal levou à convergência entre padrões de composição, (4) enquanto na mirmecofauna a convergência ocorreu para os padrões de estrutura, sendo que em ambos os casos (3 e 4), quanto mais avançado o estádio sucessional, mais parecidos entre si são os padrões de locais diferentes; (5) a Equabilidade J das formigas amostradas por iscas decresceu ao longo do desenvolvimento florestal, sendo considerado também um indicador do processo sucessional (6) as classificações funcionais das formigas também permitiram boa predição dos estádios sucessionais, com destaque para formigas capturadas com iscas quando classificadas pelo sistema proposto por Andersen (1995), devido a boa relação custo/benefício. Portanto, foi confirmado o potencial bioindicador da mirmecofauna de comunidade edáfico-epígea geral, que podem ser utilizados como ferramentas de diagnóstico e monitoramento do processo sucessional. O uso mais apropriado deve ser feito por métodos comparativos, através de parâmetros provenientes de ecossistemas referência, ou por medidas repetidas ao longo do tempo, pela observação do deslocamento dos padrões da comunidade e interpretação da proporção dos grupos. / Ecological restoration objective is to promote the return of chemical, physical and biological natural properties as those similar to the native features as possible. However, the restoration projects cannot be well evaluated due to the fact that there are no appropriated tools to do that. Plantations using native species are a prominent technique used in São Paulo state, promoting the fast rising of a plant community, but it is very expensive and hard to measure if ecological processes are returning. Bioindicators are cheap tools to evaluate environmental conditions and ecological processes because they respond to all ecosystem characteristics acting together and the responses of a single group make possible to infer properties of the total biodiversity or the full ecosystem health. Epigeic and hipogeic Arthropoda, especially ants, are potential bioindicators, due to their high abundance, ubiquitousness and their straight relationship to some important ecological processes, even to other community components, but they have not been used because it lacks information about the local scale responses to successional process and which standards can be used as parameters. Hence, we have tried to understand the main standards and responses from soil and litter community, as well as the mirmecofauna responses, under a successional gradient constituted by twelve planted forests in different ages and three forest remainders (semi-deciduous forest), all located at the hydrographic basins, Pardo and Mogi-Guaçu, searching for trustful bioindicators of forest development. General fauna was sampled from litter and soil and ants were additionally sampled by attractive baits, using glucose and sardine. Results have showed that forest development makes influence on structure and composition of general communities and ant communities found in restoration sites, so that over time, these community parameters progressively have become more similar to those found in forest remainders, consisting in a directional shifting. Epigeic and hipogeic general fauna showed to be more sensitive to forest development through dry season, while ants presented critical responses in wet season. Communities from different regions were influenced by successional process but they have presented differences among fauna compositions. The analyses using ants classified in functional groups indicated that forest development makes influence also on fauna functional pattern. Groups occupying specialized niches tend to increase their relative amount throughout forest development. The shifting of ant community functionality may be related to changes in environmental filters plus the increase of niche availability through forest development. As conclusions, under experiment features (1) species richness of litter fauna of dry season is a good predictor of forest development; (2) the richness of rare taxa allowed the best prognosis about sucessional stage, also indicating that fauna found in forest plantations reaches similar fauna standards of forest remainders close to 27 years after the deployment; (3) over time, the composition of general edaphic-epigeic community found in restoration sites becomes more similar to composition of communities found in forest remainders, (4) while for ant communities, the structure standards found in restoration sites progressively become more similar of respective parameter found in forest remainders. (5) the Equitability J of ants communities sampled using baits decreases over forest development and it may be considered a bioindicator of sucessional process; (6) ant functional groups also provided good prediction of sucessional stages, highlighting ant sampling using baits and ant functional classification according to Andersen (1995), due to best benefit-cost ratio. For appropriated application of all bioindicators, the use of comparative techniques may be considered, including ecosystem references, and rather than it uses fixed values of fauna parameters (as fixed goals to be achieved), it is better to consider which parameters of the community are changing over time and if their tendencies are in accordance to the expected.

A restauração ecológica visa o estabelecimento de ecossistemas semelhantes aos que originalmente ocupavam uma determinada área que foi degradada. Todavia, os resultados dos esforços envolvidos na restauração e no retorno dos processos ecológicos naturais são difíceis de serem medidos, pois faltam métodos apropriados. Os bioindicadores são ferramentas baratas e confiáveis para o diagnóstico das características ambientais e ecológicas, cujo princípio consiste em medidas simples de grupos biológicos especialmente sensíveis às mudanças no meio. Os Arthropoda que ocorrem no solo e na serapilheira, em especial as formigas, mediam processos ecológicos importantes e apresentam características que os tornam bioindicadores potenciais, mas seu uso ainda necessita de conhecimentos específicos. Assim, o presente estudo teve como objetivo testar o potencial indicador da comunidade de Arthropoda edáfico-epígea na restauração ecológica, com maior enfoque sobre as formigas. Foram avaliadas as comunidades de um gradiente sucessional formado por doze reflorestamentos com diferentes idades e três remanescentes florestais, localizados nas bacias dos rios Pardo e Mogi-Guaçu. O objetivo foi identificar quais os parâmetros que melhor refletem a resposta dessas comunidades ao desenvolvimento florestal. Os resultados indicaram que tanto a mirmecofauna como o restante da comunidade são influenciadas pelos estádios de desenvolvimento florestal. As comunidades variaram em composição e estrutura. A evolução das comunidades mostrou-se direcional, formando um padrão convergente de acordo com o avanço da sucessão. Os resultados indicaram forte efeito da sazonalidade e das técnicas de coleta na interpretação dos resultados. A comunidade edáfico-epígea encontrada no período seco mostrou-se especialmente sensível ao desenvolvimento florestal, enquanto a resposta da mirmecofauna foi mais evidente durante o período chuvoso. Os resultados indicaram também que as comunidades de diferentes regiões, Mogi-Guaçu e Ribeirão Preto, responderam ao processo sucessional, embora tenham apresentado diferenças na composição e no padrão de resposta. As análises com formigas classificadas em grupos funcionais indicaram que a resposta da mirmecofauna ao desenvolvimento florestal ocorre também no nível funcional. As mudanças nos padrões da comunidade e seus módulos estão relacionadas às mudanças nos filtros ambientais e à disponibilidade de nichos. Em conclusão, (1) a riqueza de espécies da fauna edáfico-epígea encontrada na serapilheira do período seco foi um bom preditor geral do desenvolvimento florestal; (2) a riqueza de grupos raros proporcionou o melhor modelo de prognóstico do estádio sucessional, indicando ainda que os reflorestamentos tendem a atingir patamares semelhantes aos encontrados nos remanescentes florestais por volta dos 27 anos após o plantio; (3) na comunidade edáfico-epígea, o avanço no desenvolvimento florestal levou à convergência entre padrões de composição, (4) enquanto na mirmecofauna a convergência ocorreu para os padrões de estrutura, sendo que em ambos os casos (3 e 4), quanto mais avançado o estádio sucessional, mais parecidos entre si são os padrões de locais diferentes; (5) a Equabilidade J das formigas amostradas por iscas decresceu ao longo do desenvolvimento florestal, sendo considerado também um indicador do processo sucessional (6) as classificações funcionais das formigas também permitiram boa predição dos estádios sucessionais, com destaque para formigas capturadas com iscas quando classificadas pelo sistema proposto por Andersen (1995), devido a boa relação custo/benefício. Portanto, foi confirmado o potencial bioindicador da mirmecofauna de comunidade edáfico-epígea geral, que podem ser utilizados como ferramentas de diagnóstico e monitoramento do processo sucessional. O uso mais apropriado deve ser feito por métodos comparativos, através de parâmetros provenientes de ecossistemas referência, ou por medidas repetidas ao longo do tempo, pela observação do deslocamento dos padrões da comunidade e interpretação da proporção dos grupos. / Ecological restoration objective is to promote the return of chemical, physical and biological natural properties as those similar to the native features as possible. However, the restoration projects cannot be well evaluated due to the fact that there are no appropriated tools to do that. Plantations using native species are a prominent technique used in São Paulo state, promoting the fast rising of a plant community, but it is very expensive and hard to measure if ecological processes are returning. Bioindicators are cheap tools to evaluate environmental conditions and ecological processes because they respond to all ecosystem characteristics acting together and the responses of a single group make possible to infer properties of the total biodiversity or the full ecosystem health. Epigeic and hipogeic Arthropoda, especially ants, are potential bioindicators, due to their high abundance, ubiquitousness and their straight relationship to some important ecological processes, even to other community components, but they have not been used because it lacks information about the local scale responses to successional process and which standards can be used as parameters. Hence, we have tried to understand the main standards and responses from soil and litter community, as well as the mirmecofauna responses, under a successional gradient constituted by twelve planted forests in different ages and three forest remainders (semi-deciduous forest), all located at the hydrographic basins, Pardo and Mogi-Guaçu, searching for trustful bioindicators of forest development. General fauna was sampled from litter and soil and ants were additionally sampled by attractive baits, using glucose and sardine. Results have showed that forest development makes influence on structure and composition of general communities and ant communities found in restoration sites, so that over time, these community parameters progressively have become more similar to those found in forest remainders, consisting in a directional shifting. Epigeic and hipogeic general fauna showed to be more sensitive to forest development through dry season, while ants presented critical responses in wet season. Communities from different regions were influenced by successional process but they have presented differences among fauna compositions. The analyses using ants classified in functional groups indicated that forest development makes influence also on fauna functional pattern. Groups occupying specialized niches tend to increase their relative amount throughout forest development. The shifting of ant community functionality may be related to changes in environmental filters plus the increase of niche availability through forest development. As conclusions, under experiment features (1) species richness of litter fauna of dry season is a good predictor of forest development; (2) the richness of rare taxa allowed the best prognosis about sucessional stage, also indicating that fauna found in forest plantations reaches similar fauna standards of forest remainders close to 27 years after the deployment; (3) over time, the composition of general edaphic-epigeic community found in restoration sites becomes more similar to composition of communities found in forest remainders, (4) while for ant communities, the structure standards found in restoration sites progressively become more similar of respective parameter found in forest remainders. (5) the Equitability J of ants communities sampled using baits decreases over forest development and it may be considered a bioindicator of sucessional process; (6) ant functional groups also provided good prediction of sucessional stages, highlighting ant sampling using baits and ant functional classification according to Andersen (1995), due to best benefit-cost ratio. For appropriated application of all bioindicators, the use of comparative techniques may be considered, including ecosystem references, and rather than it uses fixed values of fauna parameters (as fixed goals to be achieved), it is better to consider which parameters of the community are changing over time and if their tendencies are in accordance to the expected.