In dieser Arbeit, wurden Endozytose und intrazellulären Transportwegen für zwei verschiedene biologisch relevante Nanopartikel (dendritisch Polyglycerolsulfat (dPGS-np) und Polyethylenimin beschichtete Goldnanopartikel (PEI-np)) mit Kryo-Röntgentomographie untersucht. Diese Untersuchungen zeigten, beide Nanopartikeln über Makropinozytose endozytiert werden und dass die meisten Nanopartikel in Endosomen, multivesikulären Körpern und Lysosomen lokalisiert sind. Trotz dieser Ähnlichkeiten im Verhalten beider Partikel gab es auch Unterschiede die zeigten. Im Gegensatz zu PEI-np, wurden einige dPGS-np in Lipidtröpfchen gefunden. Weiterhin verursachen die PEI-np bei einer Konzentration von 0,13 nM ein Zerplatzen von Lysosomen in erheblichem Ausmaß wodurch die Nanopartikel in das Zytoplasma entweichen und teilweise in den Zellkern eindringen. Im Unterschied dazu konnte kein Nachweis für ein Zerplatzen von Lysosomen durch dPGS-np erbracht werde. Interessanterweise wurde ein Wechsel des Endocytose-Weges von der Makropinozytose zu einer mutmaßlichen Caveolae-vermittelten Endozytose beobachtet, wenn die PEI-np-Konzentration um das Zehnfache reduziert wurde. Unter diesen Bedingungen induzierten PEI-np kein Zerplatzen von Lysosomen mehr. Das Ausbleiben von zerplatzten Lysosomen bei dieser niedrigeren Konzentration korreliert mit einer verringerten Zellschädigung und hat somit wichtige Auswirkungen auf die Verwendung von PEI beim Gentransfer. Überraschenderweise stellte sich heraus, dass beide Nanopartikelarten eine bisher nicht beobachtete umfassende zytoplasmatische Veränderungen in den Zellen induzierten. Insbesondere wurden nach der Inkubation mit beiden Diese zytoplasmatischen Veränderungen könnten wichtige physiologische Veränderungen widerspiegeln, jedoch ist hierzu zusätzliche Forschung erforderlich. Diese Beobachtungen deuten darauf hin, dass das Verhalten biologisch relevanter Nanopartikel in Zukunft vorhersehbarer werden kann durch weitere systematische Studien. / In this thesis, the endocytosis and trafficking pathways of two different biologically relevant nanoparticles, namely dendritic polyglycerol sulfate coated gold nanoparticles (dPGS-np) and polyethyleneimine coated gold nanoparticles (PEI-np) were investigated via cryo soft X-ray tomography. Both nanoparticles were found to be endocytosed predominantly via macropinocytosis, and most nanoparticles became localized to endosomes, multivesicular bodies and lysosomes. Despite these similarities in trafficking, there were also key differences. Some dPGS-np were found in lipid droplets but no PEI nanoparticles were found in this compartment. At a concentration of 0.13 nM, PEI-np were observed to induce extensive rupture of lysosomes, leading to significant levels of cytoplasmic escape and nuclear entry. In contrast, no evidence for lysosomal rupture with dPGS-np was detected, and concomitantly very low levels of cytoplasmic escape and no nuclear entry were found. Interestingly, when the PEI-np concentration was reduced by ten-fold, a switch in the endocytosis pathway from macropinocytosis to a putative caveolae-mediated endocytosis was observed. Importantly, under these conditions, PEI nanoparticles no longer induced lysosomal rupture. This lack of lysosomal rupture at the lower concentration was correlated with reduced cellular damage, and so has important implications for use of PEI in gene delivery. Most surprisingly, both nanoparticle types were found to induce similar global cytoplasmic alterations in the cells. These cytoplasmic alterations could reflect important physiological changes, but further work is required to determine this. Our observations suggest that the behavior of biologically relevant nanoparticles might become more predictable in the future by further application of systematic studies.

Indiana University-Purdue University Indianapolis (IUPUI) / Epidemiologic and clinical studies routinely collect longitudinal measures of multiple outcomes. These longitudinal outcomes can be used to establish the temporal order of relevant biological processes and their association with the onset of clinical symptoms. In the first part of this thesis, we proposed to use bivariate change point models for two longitudinal outcomes with a focus on estimating the correlation between the two change points. We adopted a Bayesian approach for parameter estimation and inference. In the second part, we considered the situation when time-to-event outcome is also collected along with multiple longitudinal biomarkers measured until the occurrence of the event or censoring. Joint models for longitudinal and time-to-event data can be used to estimate the association between the characteristics of the longitudinal measures over time and survival time. We developed a maximum-likelihood method to joint model multiple longitudinal biomarkers and a time-to-event outcome. In addition, we focused on predicting conditional survival probabilities and evaluating the predictive accuracy of multiple longitudinal biomarkers in the joint modeling framework. We assessed the performance of the proposed methods in simulation studies and applied the new methods to data sets from two cohort studies. / National Institutes of Health (NIH) Grants R01 AG019181, R24 MH080827, P30 AG10133, R01 AG09956.

<p>This dissertation describes the effects of a <i>de novo</i> mutation of CaMKII found in children with learning disabilities and describes its effect on catalytic activity. We develop a malachite green assay for the measurement of CaMKII activation and use it for high-throughput chemical screening to identify CaMKII inhibitors and enhancers. We also propose a new mechanism of regulation of CaMKII activity by ADP.</p><p><br></p>