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The Morita-Baylis-Hillman (MBH) reaction is a carbon-carbon (C-C) bond forming reaction between an activated alkene and an aldehyde. It is a synthetically useful reaction due to the high atom economy and retention of multiple functional groups. Unfortunately, harsh reaction conditions are required during the MBH reaction and unpredictable product stereospecificity have hampered the widespread application of this reaction. Catalysis of the MBH reaction by enzymes has the potential to allow the reaction to occur at ambient conditions, while offering scope for improving the stereospecificity. This thesis focussed on the enzyme design of a MBH enzyme using thermostable fructose-1,6- bisphosphate (FBP) aldolases as scaffolds. These enzymes were chosen because there are common features between the aldol and MBH reactions, both making use of an enol intermediate to attack the aldehyde. In addition, aldolases typically accept a wide variety of substrates. Thermostable aldolases were selected for increased temperature tolerance creating a more desirable catalyst for industrial purposes. Thermoproteus tenax FBP aldolase (TtFBPA; WT and W144L, W144Y, K177A variants) and Staphylococcus carnosus FBP aldolase (ScFruA) were expressed and purified from E. coli. While the retro-aldol reaction catalysed by these enzymes could be easily monitored, the reverse reaction (aldol synthesis) is more difficult to quantify. Multiple methodologies for high throughput spectrophotometric detection of aldol activity were developed as a method of monitoring constructs made during directed evolution of the FBP aldolases. However, none of these proved successful in robustly determining aldol activity. The dihydroxyacetone phosphate (DHAP) mimic 1-hydroxy-3-buten-2-one phosphate (HBOP) was used to assay for MBH catalysis. While crystallographic studies with TtFBPA suggest that HBOP is bound to W144L TtFBPA in a manner compatible with the MBH reaction. NMR studies could not detect any corresponding activity. This suggests further protein engineering will be required to evolve this FBP aldolase to an MBH catalyst. In addition, our crystallographic and NMR studies with TtFBPA reveals this enzyme is capable of catalysing the formation of both FBP and tagatose-1,6-bisphosphate (TBP).Additionally, we determined the first structure of ScFruA. Interestingly, NMR experiments suggested ScFruA lacks significant control of the stereospecificity of the aldol condensation reaction and appears to catalyse the formation of FBP, TBP, xyluose-1,6- bisphosphate and psicose-1,6-bisphosphate. We conclude that while FPB aldolases could indeed provide useful scaffolds for the development of an MBH catalyst, the enzymes lack any inherent activity, necessitating the need for future creation of variants. The success of this approach will depend on the ability to screen mutant libraries for MBH product formation.

Metal-catalyzed, hydrogenative methods for carbon-carbon bond formation are attractive alternatives to traditional carbonyl addition reactions. Through in situ generation of aldehyde and organometallic species, these redox-triggered reactions circumvent the need for preactivation of reactive partners, thereby providing a more atom economic, efficient approach to carbonyl addition products. Efforts have been focused on the development of ruthenium-catalyzed coupling reactions of primary and secondary alcohols to basic feedstock chemicals and easily accessible and stable unsaturated compounds. To perform highly stereoselective reactions, investigation into the factors that control stereoselectivity in ruthenium catalyzed transfer hydrogenative couplings was undertaken. As a critical tool for the construction of organic molecules, modernizing methods for carbonyl addition can contribute to the evolution of synthetic organic methodology. / text

The focus of my graduate research in the Krische group has been the development of catalytic carbon-carbon bond forming reactions with an emphasis on controlling diastereo- and enatio-selectivity in transfer hydrogenative couplings. The broad goal of our research program has been the development and implementation of efficient green methods for carbonyl addition employing [pi]-unsaturates as surrogates to preformed organometallic reagents, thus enabling byproduct free variants of traditional carbanion chemistry. This dissertation shows the new reactions that I have developed toward this goal. These reactions includes new metal catalyzed approaches for carbonyl crotylation, aminoallylation, and vinylogous reformatsky aldol reactions. / text

Carbon-Carbon bond forming reactions are very important in organic synthesis. Preparation of most of the leading drugs on the market involves at least one carbon-carbon bond forming transformation. However, use of preformed oganometallics for this purpose is neither atom economical nor cost effective. Thus, development of atom economical and environmentally benign carbon-carbon bond forming methods is highly desirable. Catalytic hydrogenation is one of the most widely used transformations in the pharmaceutical and chemical industry. However, for several years the catalytic hydrogenation was limited to the carbon-carbon bond forming processes such as alkene hydroformylation and the Fischer-Tropsch reactions. In 2004 Krische group demonstrated a novel reductive aldol cyclization under rhodium catalyzed hydrogenation conditions. Following this, a variety of reductive carbon-carbon bond forming reactions were developed under hydrogenation conditions. The first chapter of this dissertation summarizes the reductive couplings of π-unsaturates to imines. N-heterocyclic compounds are very valuble in pharmaceutical and agrochemical industries. In the second chapter a variety of hydrogen mediated reductive couplings to aromatic N-heterocycles have been described. Transfer hydrogenation represents another important class of reactions in organic chemistry. This process employs hydrogen sources other than gaseous dihydrogen, such as isopropanol. Very recently, the Krische group reported a number of novel C-C coupling reactions using the concept of transfer hydrogenation. Thus, in chapter 3 a very elegant ruthenium catalyzed allylation reaction has been described. Finally, chapter 4 focuses on the reactivity of zinc enolates toward less reactive electrophiles such as allylic carbonates in the absence of any transition metal catalyst. During this process a direct allylic substitution of allylic carbonates with diorganozinc reagents has been discovered. These two transformations are conceptually very interesting. / text

Under the conditions of transfer hydrogenation employing ortho-cyclometallated iridium C,O-benzoate catalysts, two protocols of iterative chain elongation of 1,3-diols to furnish 1,3-polyols were developed. First, one-directional chain elongation employing mono-protected 1,3-diols as starting materials was achieved. In all cases, high levels of catalyst-directed enantioselectivity and diastereoselectivity were observed. Then, double asymmetric allylation of 1,n-glycols to deliver C₂-symmetric adducts with exceptional level of enantioselectivity was devised. Iterative two-directional elongation of 1,3-diols to furnish 1,3-polyols with high level of catalyst-directed diastereoselectivity was then achieved. Implementation of this methodology and other hydrogenative C-C bond formations proved to be effective means for the preparation of a known bryostatin A-ring fragment and the total synthesis of bryostatin 7. / text

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<p>Three methodology studies and two total synthesis endeavors are presented. First, a study of Lewis acid and hydrogen bond mediated soft enolization of thioesters and their addition to imines in the Mannich reaction is reported. MgBr2*OEt2 and Hunig's base are used in concert with bulky thioesters and aromatic aldehydes to generate syn-b-aminothioesters with moderate diastereoselectivity and yield. Next, a biomimetic organocatalytic Mannich reaction is presented using a chiral cinchona alkaloid to effect the enantioselective addition of an imines to thioesters with high yield and diastereoselectivity and enantioselectivities up to 88:12.</p><p>The direct addition of enolizable aldehydes to a-iodo thioesters to produce b-hydroxy thioesters enabled by reductive soft enolization is reported. The transformation is operationally simple and efficient and has the unusual feature of giving high syn-selectivity, which is the opposite of that produced in the aldol addition with (thio)esters under conventional conditions. This method is tolerant to aldehydes and imines that contain acidic a-protons, as well as electrophiles containing other acidic protons and base-sensitive functional groups.</p><p>The development of a strategy for the asymmetric synthesis of a large portion of the polycyclic polyprenylated acyl phloroglucinols via N-amino cyclic carbamate hydrazones, and its application to the first asymmetric total synthesis of both (+)- and (-)-clusianone is discussed. The clusianones are synthesized with an er of 99:1 and their anti-HIV activity is found to be 1.53 and 1.13 &#61549;M, respectively. A library of clusianone-like compounds is synthesized and their biological activity has been probed.</p><p>Finally, efforts towards the total synthesis of brasilicardin A are reported. An appropriate model system was synthesized, and conditions were established using a pinene-based aldol reaction to synthesize the b-methoxy-a-amino ester side chain of the molecule. Next, efforts toward the synthesis of the anti-syn-anti- perhydro-phenanthrene core are discussed.</p> / Dissertation

京都大学 / 0048 / 新制・課程博士 / 博士(工学) / 甲第19239号 / 工博第4074号 / 新制||工||1628(附属図書館) / 32238 / 京都大学大学院工学研究科合成・生物化学専攻 / (主査)教授 村上 正浩, 教授 吉田 潤一, 教授 松田 建児 / 学位規則第4条第1項該当 / Doctor of Philosophy (Engineering) / Kyoto University / DFAM