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Understanding the development, organization, and function of tissues is a central goal in developmental biology. With modern time-lapse microscopy, it is now possible to image entire tissues during development and thereby localize subcellular proteins. A particularly productive area of research is the study of single layer epithelial tissues, which can be simply described as a 2D manifold. For example, the apical band of cell adhesions in epithelial cell layers actually forms a 2D manifold within the tissue and provides a 2D outline of each cell. The Drosophila melanogaster wing has become an important model system, because its 2D cell organization has the potential to reveal mechanisms that create the final fly wing shape. Other examples include structures that naturally localize at the surface of the tissue, such as the ciliary components of planarians. Data from these time-lapse movies typically consists of mosaics of overlapping 3D stacks. This is necessary because the surface of interest exceeds the field of view of todays microscopes. To quantify cellular tissue dynamics, these mosaics need to be processed in three main steps: (a) Extracting, correcting, and stitching individ- ual stacks into a single, seamless 2D projection per time point, (b) obtaining cell characteristics that occur at individual time points, and (c) determine cell dynamics over time. It is therefore necessary that the applied methods are capable of handling large amounts of data efficiently, while still producing accurate results. This task is made especially difficult by the low signal to noise ratios that are typical in live-cell imaging. In this PhD thesis, I develop algorithms that cover all three processing tasks men- tioned above and apply them in the analysis of polarity and tissue dynamics in large epithelial cell layers, namely the Drosophila wing and the planarian epithelium. First, I introduce an efficient pipeline that preprocesses raw image mosaics. This pipeline accurately extracts the stained surface of interest from each raw image stack and projects it onto a single 2D plane. It then corrects uneven illumination, aligns all mosaic planes, and adjusts brightness and contrast before finally stitching the processed images together. This preprocessing does not only significantly reduce the data quantity, but also simplifies downstream data analyses. Here, I apply this pipeline to datasets of the developing fly wing as well as a planarian epithelium. I additionally address the problem of determining cell polarities in chemically fixed samples of planarians. Here, I introduce a method that automatically estimates cell polarities by computing the orientation of rootlets in motile cilia. With this technique one can for the first time routinely measure and visualize how tissue polarities are established and maintained in entire planarian epithelia. Finally, I analyze cell migration patterns in the entire developing wing tissue in Drosophila. At each time point, cells are segmented using a progressive merging ap- proach with merging criteria that take typical cell shape characteristics into account. The method enforces biologically relevant constraints to improve the quality of the resulting segmentations. For cases where a full cell tracking is desired, I introduce a pipeline using a tracking-by-assignment approach. This allows me to link cells over time while considering critical events such as cell divisions or cell death. This work presents a very accurate large-scale cell tracking pipeline and opens up many avenues for further study including several in-vivo perturbation experiments as well as biophysical modeling. The methods introduced in this thesis are examples for computational pipelines that catalyze biological insights by enabling the quantification of tissue scale phenomena and dynamics. I provide not only detailed descriptions of the methods, but also show how they perform on concrete biological research projects.

The cell infiltration into the myocardial infarction (MI) site was studied using magnetic resonance imaging (MRI) with micrometer-sized iron oxide particles (MPIO) as cell labeling probes. MI is a leading cause of global death and disability. However, the roles of inflammatory cells and stem cells during the post-MI remodeling and repair processes are yet to be discovered. This study was to develop noninvasive MRI techniques to monitor and quantify the cellular infiltration into the MI site. MPIO can produce pronounced signal attenuation at regions of interest in MRI. Therefore, cells labeled with these particles can be detected after they are activated and home to the MI site. In the first project, MPIO of various doses were injected into the mouse blood stream 7 days before the MI surgery. Serial MRI was performed at various time points post-MI to monitor the inflammatory cell infiltration into the MI site. Significant signal attenuation caused by labeled cells, in particular macrophages, was observed at the MI site. The study suggests an optimal imaging window should be from 7 to 14 days post-MI, during which the MR signal was inversely proportional to the MPIO dose. The study also suggests an optimal MPIO dose should be between 9.1 and 14.5 µg Fe/g body weight. In the second project, mesenchymal stem cells labeled with MPIO were transplanted into the mouse bone marrow 14 days before the MI surgery. Serial MRI was performed at various time points post-MI to monitor the labeled cells, which mobilized from the bone marrow and homed to the MI site. All the MRI findings were further confirmed by histology. In addition to revealing the characteristics of cell infiltration during MI, this study also provides noninvasive MRI techniques to monitor and potentially quantify labeled cells at the pathological site. The technique can also be used to investigate the function of cells engaged in MI and to test the effect on cell infiltration caused by any treatment strategies.

Mesenchymale Stammzellen (MSC) werden bereits in klinischen Studien zur Behandlung verschiedener Krankheiten eingesetzt. Über deren Wirkmechanismus und Verbleib nach Applikation ist jedoch noch wenig bekannt. Die in vivo-Nachverfolgung markierter MSC mittels Magnetresonanztomographie stellt eine mögliche Methode zur Erlangung weiterer Erkenntnisse dar. Zu diesem Zweck können die MSC mittels superparamagnetischen Eisenoxid (SPIO)-Partikeln markiert werden. In dieser Arbeit wurden 3 verschiedene SPIO-Produkte zur Markierung oviner und equiner MSC verwendet: Endorem™, Resovist® und Molday ION Rhodamine B™. Die Produkte wurden hinsichtlich ihrer Einflüsse auf die biologischen Eigenschaften der MSC, ihrer Markierungseffizienz und –selektivität verglichen. Desweiteren wurde die produktspezifische magnetresonanztomographische Nachverfolgbarkeit der SPIO-markierten MSC untersucht. Weiterführendes Ziel war die Selektion des am besten geeigneten SPIO-Produktes für die Verwendung in einem in vivo-Großtierversuch zur magnetresonanztomographischen Nachverfolgung SPIO-markierter MSC nach Applikation in arthrotische Gelenke. Die MSC wurden dazu aus dem Knochenmark von je 5 gesunden Schafen und Pferden isoliert, bis zur Passage 4 (P4) expandiert und schließlich mit den verschiedenen SPIO-Produkten markiert. Unmarkierte MSC der gleichen Tiere dienten zur Kontrolle. Proliferationsvermögen sowie tripotentes Differenzierungspotential wurden in vitro untersucht. Zur Evaluierung von Markierungsselektivität und -effizienz der SPIO-Produkte wurden die MSC ab der P4 bis zur P7 wöchentlich passagiert. Ein semiquantitatives histologisches Auswertungssystem basierend auf der Preußisch Blau-Färbung sowie T2*w-GRE-Sequenzen an einem 0,5T-MRT-System wurden zur Evaluierung genutzt. Markierungsselektivität bezeichnete die intra- oder extrazelluläre Lokalisation der SPIO-Partikel. Markierungseffizienz beschrieb die Menge intrazellulär vorhandener SPIO-Partikel. Es wurde gezeigt, dass sich ovine und equine MSC mit allen 3 untersuchten SPIO-Produkten erfolgreich markieren ließen. Die Ergebnisse der in vitro-Untersuchungen ergaben keine Unterschiede zwischen SPIO-markierten und unmarkierten MSC hinsichtlich des Proliferationsvermögens, der adipogenen oder osteogenen Differenzierungsfähigkeit. Jedoch wurde eine deutliche Verminderung des chondrogenen Differenzierungspotentials SPIO-markierter MSC beobachtet, welche von der Menge intrazellulär vorhandener SPIO-Partikel und somit von der Markierungseffizienz abhängig war. Zum Zeitpunkt der initialen Markierung konnte nur Molday ION Rhodamine B™ eine selektive und effiziente Zellmarkierung gewährleisten. Mit Endorem™ konnte eine selektive, jedoch keine ausreichend effiziente Zellmarkierung erreicht werden. Resovist® dagegen bewirkte zwar eine effiziente, aber sehr unselektive initiale Zellmarkierung: Mittels Preußisch Blau-Färbung wurde gezeigt, dass große Mengen von SPIO-Partikeln nur extrazellulär anhefteten. Die 3 verschiedenen SPIO-Produkte führten weiterhin zu unterschiedlich starken hypointensen MRT-Signalen der markierten MSC, welche im Verlauf der 3-wöchigen Versuchsdauer bei allen 3 Produkten stetig abnahmen. Unmarkierte MSC waren isointens, also mittels MRT nicht darstellbar und daher nicht nachverfolgbar. Stets verursachten Resovist®-markierte MSC das stärkste hypointense MRT-Signal, gefolgt von Molday ION Rhodamine B™ und Endorem™. Resovist®-markierte MSC konnten mittels MRT bei beiden Spezies über den längsten Zeitraum nachverfolgt werden (ovine MSC bis 16 Tage, equine MSC bis 23 Tage nach Markierung). Aufgrund der exzellenten initialen Markierungseigenschaften (hohe Markierungsselektivität und –effizienz sowie gute Nachverfolgbarkeit) eignet sich Molday ION Rhodamine B™ besonders gut für die SPIO-Markierung von MSC zur Nachverfolgung mittels MRT. Molday ION Rhodamine B™ verspricht somit eine erfolgreiche Anwendung in einem in vivo-Versuch zur magnetresonsztomographischen Nachverfolgung von MSC nach Applikation in arthrotische Gelenke. / Mesenchymal stem cells (MSC) are already used in clinical studies for treatment of different diseases. However, their mechanism of action and fate after application are still not fully understood. In vivo tracking of labeled MSC via magnetic resonance imaging (MRI) is a possible method to achive further knowledge. For this purpose MSC can be labelled with superparamagnetic iron oxide (SPIO) particles. For this study 3 different SPIO products were employed for labelling of ovine and equine MSC: Endorem™, Resovist®,, and Molday ION Rhodamine B™. The products were compared in terms of their influence on biologic behaviour of the MSC, their labelling efficiency, and selectivity. Furthermore, product specific magnetic resonance traceability of SPIO labelled MSC was evaluated. Final aim was the selection of the most suitable SPIO product to be used in an in vivo large animal study employing MRI tracking of SPIO labelled MSC after application into osteoarthritic joints. MSC therefore, were isolated from bone marrow of each 5 healthy sheep and horses, expanded up to passage 4 (p4), and labelled by the different SPIO products. Unlabelled MSC from the same animals served as control. Proliferation potential and tripotent differentiation capacities were assessed in vitro. For evaluation of labelling selectivity and efficiency of the SPIO products MSC were passaged weekly from p4 up to p7. Semiquantitative histological scoring based on Prussian blue staining and images using T2*w GRE sequences in a 0.5T MRI system were used. Labelling selectivity describes the intra- or extracellular localisation of the SPIO particles. Labelling efficiency describes the amount of intracellular SPIO particles. It was shown that ovine and equine MSC could be successfully labelled by all 3 evaluated SPIO products. The results of the in vitro experiments did not show differences between labelled and unlabelled MSC in terms of proliferation potential, adipogenic or osteogenic differentiation capacities. However, an inhibited chondrogenic differentiation capacity of SPIO labelled MSC was observed, which was dependend on the amount of intracellular SPIO particles and therefore, also on labelling efficiency. At the time of initial labelling, only Molday ION Rhodamine B™ showed selective and efficient cell labelling. With Endorem™ selective, but not efficient cell labelling was achieved. Resovist®, in contrast, caused efficient but very unselective initial cell labelling: By Prussian blue staining it was shown that large amounts of SPIO particles were attached extracellularly. These 3 different SPIO products led to variable hypointense MRI signals of the labelled MSC which decreased in all 3 products during the 3 week study period. Unlabelled MSC were isointense, thus not visible, and therefore, not traceable using MRI. At every point of time, Resovist® labelled MSC resulted in the most hypointense MR signals, followed by Molday ION Rhodamine B™ and Endorem™. Resovist® labelled MSC were traced over the longest time span (ovine MSC until 16 days, equine MSC until 23 days post labelling). Due to excellent initial labelling properties (high labelling efficiency and selectivity, good traceability) Molday ION Rhodamine B™ suits best for SPIO labelling of MSC to be tracked by MRI. Molday ION Rhodamine B™ therefore, promises a successful use in an in vivo study using MRI for MSC tracking after application into osteoarthritic joints.

Cellular therapy is emerging as a clinically viable strategy in the field of solid organ transplantation, where it is expected to reduce the dependency on conventional immunosuppression. This has produced a demand for highly sensitive methods to monitor the persistence and tissue distribution of administered cells in vivo. However, tracking cells presents significant challenges. In many cases transplanted cells are autologous with the immune system of the transplant recipient, and hence are invisible to typical methods of detection. To enable their differentiation, the cells must be labelled with a suitable, non-toxic and long lifetime label, prior to their administration to patients. In addition, administered cells represent only a small fraction of the recipient's endogenous cells, which necessitates the use of an extremely sensitive detection method. Laser ablation – inductively coupled plasma – mass spectrometry (LA-ICP-MS) is an exquisitely sensitive analytical technique, capable of imaging trace elements in complex samples, at high spatial resolution.

La pulpe dentaire est sujette à des lésions sévères faisant suite à une carie dentaire ou à un traumatisme. La thérapeutique conventionnelle préconisée alors est le traitement endodontique, qui consiste en l’exérèse de la totalité de la pulpe dentaire et le comblement de l’espace pulpaire par un matériau inerte. Ce traitement induit une fragilisation de la dent et une plus grande susceptibilité aux infections. Au cours de ce travail, nous avons mis au point une solution alternative, en proposant le remplacement de la pulpe dentaire lésée par une « pulpe équivalente » constituée de cellules souches mésenchymateuses de la pulpe ensemencées dans une matrice de collagène. Nous avons testé ce substitut pulpaire au travers d’un modèle de pulpotomie de la molaire chez le rat, à savoir l’exérèse de la totalité du parenchyme de la chambre pulpaire et conservation du réseau vasculaire radiculaire, où nous avons implanté des « pulpes équivalentes ». Notre objectif étant notamment de déterminer le devenir des cellules souches pulpaires implantées dans la dent grâce à l’imagerie nucléaire, dans ce contexte de développement d’une thérapie cellulaire. Les cellules ont été marquées à l’111Indium-oxine préalablement à leur implantation. Nous avons montré que le marquage n'avait pas d'incidence sur la viabilité et la prolifération des cellules pulpaires. Le suivi du signal s’est fait par tomographie d'émission monophotonique, couplée à un scanner spécifique du petit animal (NanoSPECT/CT, Bioscan), hebdomadairement pendant 3 semaines. Nous avons mis en évidence que l'intensité du signal SPECT était directement liée à l'intégrité des cellules, puisque que les matrices implantées avec des cellules marquées puis lysées par choc isotonique présentaient une diminution rapide de l’intensité du marquage. Grâce à la sensibilité de la méthode d’imagerie choisie, nous avons montré l’absence de diffusion majeure des cellules dans la circulation sanguine à partir du site d'implantation, ce qui pourrait constituer un risque de minéralisation ectopique lié à l’implantation de cellules souches mésenchymateuses. Par ailleurs, l’étude par histologie des processus de réparation et régénération de la pulpe dans les dents de rat a mis en évidence une prolifération abondante de cellules de type fibroblastique au sein des matrices, ainsi que la présence de nombreux vaisseaux et de nerfs dans la matrice cellularisée et à proximité. Ces résultats, non observés dans les matrices implantées avec des cellules lysées, suggéraient donc une fonctionnalité du tissu reconstruit et suggéraient que les cellules pulpaires implantées favorisaient une néovascularisation rapide de la pulpe équivalente, vraisemblablement en induisant un recrutement de cellules endothéliales à partir du réseau vasculaire radiculaire résiduel. / The dental pulp is prone to severe injuries following a tooth decay or trauma. Conventional recommended therapy is the endodontic treatment, which consists in the removal of all of the dental pulp and filling of the pulp space with an inert material. This treatment leads to a weakening of the tooth and a greater susceptibility to infection.In this work, we have developed an alternative solution, proposing the replacement of the injuried dental pulp by an " pulp equivalent " consisting of mesenchymal stem cells from the pulp seeded in a collagen matrix . We tested this pulp substitut through a model of the molar pulpotomy in rats, ie. the removal of the entire parenchyma of the pulp chamber and preservation of the root vascular network and implantation of the pulp equivalent. Our aim was to determine the fate of pulp stem cells implanted in the tooth by nuclear imaging in the context of developing a cell therapy. The cells were labeled with 111Indium - oxine prior to their implantation. We have shown that the labelling had no effect on the viability and proliferation of pulp cells. The signal tracking was done by single photon emission tomography , coupled with a specific small animal scanner ( NanoSPECT / CT , Bioscan ) weekly for 3 weeks. We demonstrated that the intensity of SPECT signal was directly related to the integrity of the cells, since the lysed labeled cells by isotonic shock showed a rapid decrease in the intensity of labeling . Due to the sensitivity of the chosen imaging method , we have shown the absence of major diffusion cells into the bloodstream from the site of implantation, which could result in a risk of ectopic mineralization related to the implementation of mesenchymal stem cells.Furthermore, the study by histology repair processes and regeneration of the pulp in teeth rat showed abundant proliferation of fibroblast-like cells within the matrix , and the presence of numerous vessels and nerves in matrix cellularized. These results , not observed in the matrices implanted with lysed cells, thus suggesting a feature of the reconstructed tissue and suggested that the pulp cells implanted favored a rapid neovascularization equivalent pulp, presumably by inducing the recruitment of endothelial cells from the residual root vascular network.

Understanding the development, organization, and function of tissues is a central goal in developmental biology. With modern time-lapse microscopy, it is now possible to image entire tissues during development and thereby localize subcellular proteins. A particularly productive area of research is the study of single layer epithelial tissues, which can be simply described as a 2D manifold. For example, the apical band of cell adhesions in epithelial cell layers actually forms a 2D manifold within the tissue and provides a 2D outline of each cell. The Drosophila melanogaster wing has become an important model system, because its 2D cell organization has the potential to reveal mechanisms that create the final fly wing shape. Other examples include structures that naturally localize at the surface of the tissue, such as the ciliary components of planarians. Data from these time-lapse movies typically consists of mosaics of overlapping 3D stacks. This is necessary because the surface of interest exceeds the field of view of todays microscopes. To quantify cellular tissue dynamics, these mosaics need to be processed in three main steps: (a) Extracting, correcting, and stitching individ- ual stacks into a single, seamless 2D projection per time point, (b) obtaining cell characteristics that occur at individual time points, and (c) determine cell dynamics over time. It is therefore necessary that the applied methods are capable of handling large amounts of data efficiently, while still producing accurate results. This task is made especially difficult by the low signal to noise ratios that are typical in live-cell imaging. In this PhD thesis, I develop algorithms that cover all three processing tasks men- tioned above and apply them in the analysis of polarity and tissue dynamics in large epithelial cell layers, namely the Drosophila wing and the planarian epithelium. First, I introduce an efficient pipeline that preprocesses raw image mosaics. This pipeline accurately extracts the stained surface of interest from each raw image stack and projects it onto a single 2D plane. It then corrects uneven illumination, aligns all mosaic planes, and adjusts brightness and contrast before finally stitching the processed images together. This preprocessing does not only significantly reduce the data quantity, but also simplifies downstream data analyses. Here, I apply this pipeline to datasets of the developing fly wing as well as a planarian epithelium. I additionally address the problem of determining cell polarities in chemically fixed samples of planarians. Here, I introduce a method that automatically estimates cell polarities by computing the orientation of rootlets in motile cilia. With this technique one can for the first time routinely measure and visualize how tissue polarities are established and maintained in entire planarian epithelia. Finally, I analyze cell migration patterns in the entire developing wing tissue in Drosophila. At each time point, cells are segmented using a progressive merging ap- proach with merging criteria that take typical cell shape characteristics into account. The method enforces biologically relevant constraints to improve the quality of the resulting segmentations. For cases where a full cell tracking is desired, I introduce a pipeline using a tracking-by-assignment approach. This allows me to link cells over time while considering critical events such as cell divisions or cell death. This work presents a very accurate large-scale cell tracking pipeline and opens up many avenues for further study including several in-vivo perturbation experiments as well as biophysical modeling. The methods introduced in this thesis are examples for computational pipelines that catalyze biological insights by enabling the quantification of tissue scale phenomena and dynamics. I provide not only detailed descriptions of the methods, but also show how they perform on concrete biological research projects.

The local microenvironment of hematopoietic stem cells (HSCs) in the bone marrow -referred to as stem cell niche- is thought to regulate the balance of stem cell maintenance and differentiation by a complex interplay of extrinsic signals including spatial constraints, extracellular matrix (ECM) components and cell-cell interactions. To dissect the role of niche ECM components, a set of well-defined matrix biomolecular coatings including fibronectin, laminin, collagen IV, tropocollagen I, heparin, heparan sulphate, hyaluronic acid and co-fibrils of collagen I with heparin or hyaluronic acid were prepared and analyzed with respect to adhesive interactions of human CD133+ HSCs in vitro. ECM molecule dependent adhesion areas as well as fractions of adherent HSCs were assessed by reflection interference contrast microscopy and differential interference contrast microscopy. HSCs, so far mostly classified as suspension cells, exhibited intense adhesive interactions with fibronectin, laminin, collagen IV, heparin, heparan sulphate, and collagen I based co-fibrils. An integrin mediated adhesion on fibronectin and a L-selectin mediated adhesion on heparin pointed to specific interactions based on different adhesion mechanisms. As a consequence of HSC adhesion to molecules of the vascular and the endosteal regions, both regions were confirmed as possible stem cell niches and adhesive signals were suggested as potential regulators of stem cell fate. Furthermore, the impact of a spatially organized ECM on the HSC behavior was analyzed by single cell tracking. These studies required the development of engineered three-dimensional, ECM coated microcavities with the option for single cell tracking. A semi-automated cell-tracking tool was established to accelerate data access from time-lapse image sequences. From this analysis it was possible to reveal the genealogy, localization, morphology and migration of single HSCs over a time period of 4 days. A decreased cycling frequency was observed depending on the HSC localization in the spatially constraining microcavities. Besides the revealed impact of spatial constraints on HSC fate, the newly engineered ECM-coated microcavity setup and the semi-automated cell tracking tool provide new options to study the cell fate in engineered microenvironments at single cell level for other cell types ex vivo. / Die lokale Mikroumgebung von Blutstammzellen (BSZ) im Knochenmark, bezeichnet als Stammzellnische, reguliert das Gleichgewicht von Stammzellerhaltung und -differenzierung durch ein komplexes Zusammenspiel von extrinsischen Signalen wie räumliche Beschränkungen, Komponenten der extrazellulären Matrix (EZM) und Zell-Zell Wechselwirkungen. Um die Rolle der EZM-Komponenten zu analysieren, wurden definierte Beschichtungen von Fibronektin, Laminin, Kollagen IV, monomerem Kollagen I, Heparin, Heparan Sulphat, Hyaluronsäure und Co-Fibrillen aus Kollagen I und Heparin oder Hyaluronsäure hergestellt und in vitro bezüglich der adhäsiven Wechselwirkungen von humanen CD133+ BSZ untersucht. Die Adhäsionsflächen und der Anteil adhärenter Zellen wurden in Abhängigkeit von der EZM-Beschichtung mittels Reflexions- Interferenz-Kontrast-Mikroskopie und Differentieller Interferenz Kontrast Mikroskopie bestimmt. BSZ, bisher als Suspensionszellen definiert, zeigten intensive adhäsive Wechselwirkungen mit Fibronektin, Laminin, Kollagen IV, Heparin, Heparan Sulphat und den Co-Fibrillen. Eine Integrin abhängige Adhäsion auf Fibronektin und eine L-Selektin abhängige Adhäsion auf Heparin, wiesen auf spezifische Wechselwirkungen hin, die auf unterschiedlichen Mechanismen basieren. Aufgrund der Adhäsion von BSZ sowohl zu Molekülen der vaskulären als auch der endostealen Knochenmarkregion, wurden beide Bereiche als mögliche Stammzellnische bestätigt. Adhäsive Signale sind potentielle Regulatoren der Stammzellentwicklung. Im Weiteren wurde der Einfluss einer räumlich beschränkenden EZM auf das Verhalten der BSZ durch Einzelzellverfolgung untersucht. Diese Studien erforderten die Entwicklung von dreidimensionalen EZM-beschichteten Mikrokavitäten, die das Verfolgen einzelner Zellen ermöglichten. Es wurde ein halbautomatischer Algorithmus für die Zellverfolgung etabliert, um die Datengenerierung von den Zeitreihenaufnahmen zu beschleunigen. Die Analysen ermöglichten Aussagen über die Genealogie, Lokalisierung, Morphologie und Migration einzelner BSZ während einer Analysenzeit von 4 Tagen. Eine verringerte Zellteilungsaktivität wurde in Abhängigkeit von der BSZ Lokalisierung innerhalb der räumlich einschränkenden Mikrokavitäten festgestellt. Neben diesen Erkenntnissen bieten die entwickelten Mikrokavitäten und die etablierte Einzelzellverfolgung neue Möglichkeiten auch andere Zelltypen auf Einzelzellniveau ex vivo zu untersuchen.

Mesenchymale Stammzellen (MSC) werden bereits in klinischen Studien zur Behandlung verschiedener Krankheiten eingesetzt. Über deren Wirkmechanismus und Verbleib nach Applikation ist jedoch noch wenig bekannt. Die in vivo-Nachverfolgung markierter MSC mittels Magnetresonanztomographie stellt eine mögliche Methode zur Erlangung weiterer Erkenntnisse dar. Zu diesem Zweck können die MSC mittels superparamagnetischen Eisenoxid (SPIO)-Partikeln markiert werden. In dieser Arbeit wurden 3 verschiedene SPIO-Produkte zur Markierung oviner und equiner MSC verwendet: Endorem™, Resovist® und Molday ION Rhodamine B™. Die Produkte wurden hinsichtlich ihrer Einflüsse auf die biologischen Eigenschaften der MSC, ihrer Markierungseffizienz und –selektivität verglichen. Desweiteren wurde die produktspezifische magnetresonanztomographische Nachverfolgbarkeit der SPIO-markierten MSC untersucht. Weiterführendes Ziel war die Selektion des am besten geeigneten SPIO-Produktes für die Verwendung in einem in vivo-Großtierversuch zur magnetresonanztomographischen Nachverfolgung SPIO-markierter MSC nach Applikation in arthrotische Gelenke. Die MSC wurden dazu aus dem Knochenmark von je 5 gesunden Schafen und Pferden isoliert, bis zur Passage 4 (P4) expandiert und schließlich mit den verschiedenen SPIO-Produkten markiert. Unmarkierte MSC der gleichen Tiere dienten zur Kontrolle. Proliferationsvermögen sowie tripotentes Differenzierungspotential wurden in vitro untersucht. Zur Evaluierung von Markierungsselektivität und -effizienz der SPIO-Produkte wurden die MSC ab der P4 bis zur P7 wöchentlich passagiert. Ein semiquantitatives histologisches Auswertungssystem basierend auf der Preußisch Blau-Färbung sowie T2*w-GRE-Sequenzen an einem 0,5T-MRT-System wurden zur Evaluierung genutzt. Markierungsselektivität bezeichnete die intra- oder extrazelluläre Lokalisation der SPIO-Partikel. Markierungseffizienz beschrieb die Menge intrazellulär vorhandener SPIO-Partikel. Es wurde gezeigt, dass sich ovine und equine MSC mit allen 3 untersuchten SPIO-Produkten erfolgreich markieren ließen. Die Ergebnisse der in vitro-Untersuchungen ergaben keine Unterschiede zwischen SPIO-markierten und unmarkierten MSC hinsichtlich des Proliferationsvermögens, der adipogenen oder osteogenen Differenzierungsfähigkeit. Jedoch wurde eine deutliche Verminderung des chondrogenen Differenzierungspotentials SPIO-markierter MSC beobachtet, welche von der Menge intrazellulär vorhandener SPIO-Partikel und somit von der Markierungseffizienz abhängig war. Zum Zeitpunkt der initialen Markierung konnte nur Molday ION Rhodamine B™ eine selektive und effiziente Zellmarkierung gewährleisten. Mit Endorem™ konnte eine selektive, jedoch keine ausreichend effiziente Zellmarkierung erreicht werden. Resovist® dagegen bewirkte zwar eine effiziente, aber sehr unselektive initiale Zellmarkierung: Mittels Preußisch Blau-Färbung wurde gezeigt, dass große Mengen von SPIO-Partikeln nur extrazellulär anhefteten. Die 3 verschiedenen SPIO-Produkte führten weiterhin zu unterschiedlich starken hypointensen MRT-Signalen der markierten MSC, welche im Verlauf der 3-wöchigen Versuchsdauer bei allen 3 Produkten stetig abnahmen. Unmarkierte MSC waren isointens, also mittels MRT nicht darstellbar und daher nicht nachverfolgbar. Stets verursachten Resovist®-markierte MSC das stärkste hypointense MRT-Signal, gefolgt von Molday ION Rhodamine B™ und Endorem™. Resovist®-markierte MSC konnten mittels MRT bei beiden Spezies über den längsten Zeitraum nachverfolgt werden (ovine MSC bis 16 Tage, equine MSC bis 23 Tage nach Markierung). Aufgrund der exzellenten initialen Markierungseigenschaften (hohe Markierungsselektivität und –effizienz sowie gute Nachverfolgbarkeit) eignet sich Molday ION Rhodamine B™ besonders gut für die SPIO-Markierung von MSC zur Nachverfolgung mittels MRT. Molday ION Rhodamine B™ verspricht somit eine erfolgreiche Anwendung in einem in vivo-Versuch zur magnetresonsztomographischen Nachverfolgung von MSC nach Applikation in arthrotische Gelenke. / Mesenchymal stem cells (MSC) are already used in clinical studies for treatment of different diseases. However, their mechanism of action and fate after application are still not fully understood. In vivo tracking of labeled MSC via magnetic resonance imaging (MRI) is a possible method to achive further knowledge. For this purpose MSC can be labelled with superparamagnetic iron oxide (SPIO) particles. For this study 3 different SPIO products were employed for labelling of ovine and equine MSC: Endorem™, Resovist®,, and Molday ION Rhodamine B™. The products were compared in terms of their influence on biologic behaviour of the MSC, their labelling efficiency, and selectivity. Furthermore, product specific magnetic resonance traceability of SPIO labelled MSC was evaluated. Final aim was the selection of the most suitable SPIO product to be used in an in vivo large animal study employing MRI tracking of SPIO labelled MSC after application into osteoarthritic joints. MSC therefore, were isolated from bone marrow of each 5 healthy sheep and horses, expanded up to passage 4 (p4), and labelled by the different SPIO products. Unlabelled MSC from the same animals served as control. Proliferation potential and tripotent differentiation capacities were assessed in vitro. For evaluation of labelling selectivity and efficiency of the SPIO products MSC were passaged weekly from p4 up to p7. Semiquantitative histological scoring based on Prussian blue staining and images using T2*w GRE sequences in a 0.5T MRI system were used. Labelling selectivity describes the intra- or extracellular localisation of the SPIO particles. Labelling efficiency describes the amount of intracellular SPIO particles. It was shown that ovine and equine MSC could be successfully labelled by all 3 evaluated SPIO products. The results of the in vitro experiments did not show differences between labelled and unlabelled MSC in terms of proliferation potential, adipogenic or osteogenic differentiation capacities. However, an inhibited chondrogenic differentiation capacity of SPIO labelled MSC was observed, which was dependend on the amount of intracellular SPIO particles and therefore, also on labelling efficiency. At the time of initial labelling, only Molday ION Rhodamine B™ showed selective and efficient cell labelling. With Endorem™ selective, but not efficient cell labelling was achieved. Resovist®, in contrast, caused efficient but very unselective initial cell labelling: By Prussian blue staining it was shown that large amounts of SPIO particles were attached extracellularly. These 3 different SPIO products led to variable hypointense MRI signals of the labelled MSC which decreased in all 3 products during the 3 week study period. Unlabelled MSC were isointense, thus not visible, and therefore, not traceable using MRI. At every point of time, Resovist® labelled MSC resulted in the most hypointense MR signals, followed by Molday ION Rhodamine B™ and Endorem™. Resovist® labelled MSC were traced over the longest time span (ovine MSC until 16 days, equine MSC until 23 days post labelling). Due to excellent initial labelling properties (high labelling efficiency and selectivity, good traceability) Molday ION Rhodamine B™ suits best for SPIO labelling of MSC to be tracked by MRI. Molday ION Rhodamine B™ therefore, promises a successful use in an in vivo study using MRI for MSC tracking after application into osteoarthritic joints.

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