Thematic Paper (M.C.T.M. (Tropical Pediatrics))--Mahidol University, 2005.

Thematic Paper (M.C.T.M. (Tropical Pediatrics))--Mahidol University, 2005.

O objetivo principal dessa tese foi avaliar se o tratamento com ceftriaxona e um macrolídeo leva a melhores desfechos quando comparada a monoterapia com ceftriaxona em pacientes hospitalizados com HIV/AIDS e pneumonia adquirida na comunidade (PAC). 227 adultos com HIV hospitalizados por uma suspeita de PAC foram randomizados numa proporção 1:1 para receber um dos dois regimes, ceftriaxona mais macrolídeo ou ceftriaxona mais placebo. Houve 2 exclusões após a randomização, um paciente retirou consentimento para uso de seus dados e outro paciente já havia sido incluído previamente no estudo, perfazendo um total de 225 pacientes analisados (112 receberam ceftriaxona mais placebo e 113 receberam ceftriaxona mais macrolídeo). Os pacientes tinham HIV há um longo tempo (período mediano de 10 anos) e a maioria não fazia uso regular de terapia antirretroviral. Somente 32/202 pacientes (16%) tinham carga viral menor que 50 cópias/mL e 146/202 (72%) tinham contagem de linfócitos T CD4+ menor que 200 células/mm³. A frequência do desfecho primário, letalidade durante a internação, não foi estatisticamente distinta entre os regimes estudados: 12/112 (11%) pacientes que receberam ceftriaxona mais placebo e 17/113 (15%) que receberam ceftriaxona mais macrolídeo foram a óbito durante a hospitalização (HR: 1.22, 95% CI: 0.57-2.59). Não foram encontradas diferenças entre os regimes para os desfechos secundários: letalidade em 14 dias (RR: 2.38, 95% CI: 0.87-6.53), uso de drogas vasoativas (OR: 1.18, 95% CI: 0.60-2.29) e ventilação mecânica (OR: 1.24, 95% CI: 0.64- 2.40). A etiologia das infecções pulmonares adquiridas na comunidade nesses pacientes com infecção pelo HIV também foi estudada e determinada prospectivamente. Essa investigação também buscou analisar a contribuição de diferentes métodos diagnósticos e o impacto de diferentes abordagens de investigação microbiológica. Além disso, os achados microbiológicos foram analisados levando em consideração a contagem de linfócitos T CD4+, gravidade da doença e a situação da vacina pneumocócica. 224 pacientes foram submetidos a investigação microbiológica estendida e 143 (64%) tiveram uma etiologia determinada. Por outro lado, a investigação microbiológica de rotina foi capaz de determinar o agente etiológico em 92 (41%) pacientes. Métodos baseados na reação em cadeia da polimerase foram essenciais para o diagnóstico de bactérias atípicas e vírus, além de melhorar a detecção de Pneumocystis jirovecii. Entre os 143 pacientes com uma etiologia determinada, Pneumocystis jirovecii foi o principal agente, detectado em 52 (36%) casos, seguido pelo Mycobacterium tuberculosis responsável por 28 (20%) casos. Streptococcus pneumoniae e Rhinovírus foram diagnosticados em 22 (15%) casos cada e Influenza em 15 (10%) casos. Entre as bactérias atípicas, Mycoplasma pneumoniae foi responsável por 12 (8%) e Chlamydophila pneumoniae por 7 (5%) casos. Infecções mistas ocorreram em 48 casos (34%). Streptococcus pneumoniae foi associado com maiores escores de gravidade, sem associação com o estado vacinal. A análise de agentes etiológicos baseada na contagem de linfócitos T CD4+ demonstrou que a etiologia da pneumonia nos pacientes que estavam gravemente imunossuprimidos (CD4+ < 200 células/mm³) foi similar aos que não estavam. Pneumocystis jirovecii foi o único agente mais frequente no primeiro grupo, um achado esperado levando em consideração os critérios diagnósticos empregados / The main purpose of this thesis was to evaluate if treatment with ceftriaxone and a macrolide improved patient outcome when compared with monotherapy with ceftriaxone in hospitalized patients with HIV/AIDS with community acquired pneumonia (CAP). 227 adult patients with HIV hospitalized due to suspected CAP were randomized to receive one of two regimens, ceftriaxone plus macrolide or ceftriaxone plus placebo, at a 1:1 proportion. We had 2 exclusions after randomization, one patient who withdrew consent for data inclusion and use and one that had previously been included, leaving a total of 225 patients to analyse (112 received ceftriaxone plus placebo and 113 received ceftriaxone plus macrolide). Patients had prolonged HIV infection, the median period was twelve years, and most of them did not make regular use of antiretroviral therapy. Only 32/202 patients (16%) had viral load below 50 copies/mL and 146/202 (72%) had a CD4+ T cell count below 200 cells/mm³. The frequency of the primary outcome, in-hospital mortality, was not statistically different between the studied regimens: 12/112 (11%) patients who received ceftriaxone plus placebo and 17/113 (15%) who received ceftriaxone plus macrolide died during hospitalization (HR: 1.22, 95% CI: 0.57-2.59). We did not find differences between the regimens for the secondary outcomes: mortality within 14 days (RR: 2.38, 95% CI: 0.87-6.53), need for vasoactive drug (OR: 1.18, 95% CI: 0.60-2.29) or mechanical ventilation (OR: 1.24, 95% CI: 0.64-2.40). The etiology of community-acquired pulmonary infections in these hospitalized patients with HIV was also studied and determined prospectively. This investigation also aimed to analyze the contribution of different diagnostic methods as well of the impact of different approaches to microbiological evaluation and to evaluate the microbiological findings in relation to the CD4+ T cell count, the severity of disease and pneumococcal vaccine status. 224 patients underwent the extended microbiological investigation of which 143 (64%) had an etiology determined. On the other hand, the microbiological routine investigation was able to determine the etiological agents in 92 (41%) patients. Polymerase chain reaction-based methods were essential for the diagnosis of atypical bacteria and viruses, besides contributing to ameliorate Pneumocystis jirovecii detection. Among the 143 patients with a determined etiology, Pneumocystis jirovecii was the main agent, detected in 52 (36%) cases and followed by Mycobacterium tuberculosis accounting for 28 (20%) cases. Streptococcus pneumoniae and Rhinovirus were diagnosed in 22 (15%) cases each and Influenza in 15 (10%) cases. Among atypical bacteria, Mycoplasma pneumoniae was responsible for 12 (8%) and Chlamydophila pneumoniae for 7 (5%) cases. Mixed infections occurred in 48 cases (34%). Streptococcus pneumoniae was associated with higher severity scores and not associated with vaccine status. Performing an analysis of causative agents based on CD4+ T cell count, we found that the etiology of pneumonia in those severely immunosuppressed (CD4+ < 200 cells/mm³) was similar to those who were not. Pneumocystis jirovecii is the only agent more frequent in the former group, an expected finding considering our diagnostic criteria

Orientadores: Patrícia Moriel, Carlos Emílio Levy / Dissertação (mestrado) - Universidade Estadual de Campinas, Faculdade de Ciências Médicas / Made available in DSpace on 2018-08-26T14:28:55Z (GMT). No. of bitstreams: 1 Mattos_KarenPradoHerzer_M.pdf: 1543498 bytes, checksum: 9d1f9328148bdfe74a6e65854c319426 (MD5) Previous issue date: 2014 / Resumo: As Infecções de Trato Urinário (ITUs) são definidas como colonizações microbianas com invasão tecidual de qualquer parte do trato urinário, desde a uretra até os rins, considerada a doença infecciosa extra intestinal de origem comunitária mais comum em todo mundo. As ITUs em sua maioria são causadas por bactérias Gram-negativas, sendo a Escherichia coli o micro-organismo invasor mais comum, isolado em cerca de 80% a 90% das infecções agudas de origem comunitária. Neste início de terceiro milênio, a resistência bacteriana é um dos desafios globais de saúde pública a ser enfrentado e sabe-se que, a intensidade de exposição ao antimicrobiano é um importante parâmetro relacionado à seleção e à manutenção de bactérias resistentes. Em 2010 o Brasil vivia uma situação na qual estavam sendo observados vários focos de infecções hospitalares causadas por micro-organismos multirresistentes como a Klebsiella pneumoniae produtoras de carbapenemase (KPC). Em função do preocupante cenário, em 2010 foi implantada a Resolução da Diretoria Colegiada (RDC) nº 44 da Agência Nacional de Vigilância Sanitária (ANVISA) que possui, dentre outros objetivos, a diminuição da resistência bacteriana aos antimicrobianos. Objetivo: Estudar o perfil de resistência de bactérias Gram-negativas relacionadas às ITUs de origem comunitária e analisar a influência da legislação atuante no controle de venda de antimicrobianos. Métodos: População de pacientes de demanda espontânea aos hospitais da Universidade Estadual de Campinas entre 2009 e 2013 com hipótese-diagnóstica de ITU de origem comunitária, de ambos os sexos, independente de raça e idade. As amostras de urina dos pacientes foram encaminhadas ao Laboratório de Microbiologia Clínica da instituição e foram incluídas no estudo as uroculturas com resultado positivo para os agentes etiológicos Escherichia coli, Klebsiella pneumoniae e Proteus mirabilis. Os antimicrobianos foram agrupados em 5 classes: Aminoglicosídeos, Fluorquinolonas, Sulfonamidas, Beta-lactâmicos e Nitrofurano . Foi realizada análise estatística descritiva e o nível de significância adotado foi de 5%. Resultados e discussão: Os dados demográficos demonstraram prevalência média de 75% de ITU's em mulheres. A idade média dos casos de ITU foi de 40 ± 1,8 anos. A E. coli foi o patógeno mais frequente (83%) nos exames de urocultura para casos de ITU. O relatório estatístico não apontou diferenças significantes entre a variação dos percentuais de resistência bacteriana para E. coli e P. mirabilis, além de não apontar uma tendência linear. Apenas a K. pneumoniae apresentou resultado estatístico significante na análise geral quando foi observado aumento das taxas de resistência e tendência linear crescente. A E. coli apresentou queda do percentual de resistência bacteriana e tendência linear decrescente com relação às fluorquinolonas. Estudo de 2013 da Universidade de São Paulo analisou o consumo extra hospitalar de antimicrobianos e observou queda de 7% do consumo geral, além de queda de 28% da venda de norfloxacino, o que suporta nossos resultados. Conclusão: Sugere-se que a RDC nº 44/2010 influenciou na queda das taxas de resistência bacteriana entre a classe das fluorquinolonas, principalmente o ciprofloxacino, para ITU¿s de origem comunitária / Abstract: Introduction: Community-acquired urinary tract infections (UTIs) are extra intestinal infectious diseases, causing microbial colonization and tissue invasion in the urinary tract. Gram-negative bacteria, especially Escherichia coli, are the most common invasive microorganisms causing UTIs; they are isolated in 80%¿90% of acute infections of community origin. Bacterial resistance is currently a global public health challenge. The intensity of bacterial exposure to antimicrobials is an important parameter affecting the selection and maintenance of resistant bacteria. In 2010, Brazil witnessed several outbreaks of nosocomial infections caused by multidrug-resistant microorganisms such as Klebsiella pneumoniae carbapenemase (KPC). Collegiate Board Resolution (CBR) no. 44 was introduced by the National Health Surveillance Agency with the goal of reducing bacterial resistance to antimicrobials. Objectives: To study the resistance profile of gram-negative bacteria causing community-acquired UTIs and to analyze the influence of the legislation promoting active control of the sale of antimicrobials. Methods: Patients of different gender, ethnicity, and age, admitted at the State University of Campinas Hospital between 2009 and 2013, with a diagnosis of suspected community-acquired UTI were included in the study Patients with urine cultures positive for Escherichia coli, Klebsiella pneumoniae, and Proteus mirabilis were included in the study. The antimicrobial classes used were aminoglycosides, fluoroquinolones, sulfonamides, beta-lactams, and nitrofuran. Descriptive statistical analysis was performed, and the level of significance was set at 5%. Results and Discussion: Demographic data showed the average prevalence of UTIs among women to be 75%. The average age of the affected individuals was 40 ± 1.8 years. E. coli was the most common pathogen (83%) detected in urine culture tests for UTI cases. The percentage of variation of bacterial resistance was not significant between E. coli and P. mirabilis and did not indicate a linear trend. Only K. pneumoniae showed a statistically significant result in the overall analysis, showing increasing rates of resistance and an increasing linear trend. E. coli demonstrated a decrease in the percentage of bacterial resistance and a decreasing linear trend in fluoroquinolone resistance. The 2013 study from the University of Sao Paulo discussed the extra-hospital antimicrobial consumption, and observed a 7% decline in overall consumption and a 28% decline in the sale of norfloxacin, which supports our results. Conclusion: It is suggested that CBR nº 44/2010 influenced the decline in the rate of bacterial resistance towards fluoroquinolones, especially ciprofloxacinin community-acquired UTIs / Mestrado / Ciencias Biomedicas / Mestra em Ciências Médicas

Staphylococcus aureus est l’une des causes majeures des infections communautaires et nosocomiales. Ce germe est responsable des infections aiguës et chroniques dont la plupart sont dues à sa capacité à adhérer sur les implants médicaux et à former un biofilm. D’après le Center for Disease Control and Prevention (CDC), 65% des infections bactériennes sont dues à la présence des biofilms. En outre, les infections associées aux biofilms constituent un problème majeur en clinique et sont la cause de l’augmentation de la mortalité et du coût de traitement. <p>Chez S. aureus, la formation du biofilm se déroule en deux phases principales: la première phase est l’attachement initial des cellules sur une surface, et la seconde est la multiplication et la formation d’une communauté structurée, mature et multicouche des cellules bactériennes. A l’intérieur du biofilm, les bactéries développent plusieurs types d’interactions et accroissent leur résistance aux agents antimicrobiens et aux défenses immunitaires de l’hôte, ce qui constitue un véritable problème de santé publique.<p>Les objectifs de ce travail étaient: (1) de caractériser des souches cliniques de S. aureus sensibles et résistantes à la méticilline (SASM et SARM) par une analyse phénotypique et génotypique; (2) d’étudier la répercussion des propriétés de membranes sur l’adhésion et la formation du biofilm; (3) de rechercher un moyen pour la prévention de l’adhésion et de la formation d’un biofilm sur une surface abiotique.<p>Deux souches de référence et 12 souches cliniques de S. aureus (4 SARM et 8 SASM) collectées à Kinshasa ont été caractérisées par la résistance aux antibiotiques, par le typage d’une région X du gène spa codant pour la protéine A de S. aureus et par la détermination des propriétés de la surface cellulaire. L’adhésion à une surface et la formation du biofilm ont été respectivement étudiées par la méthode de Biofilm Ring Test® (BFRT®) et par celle de coloration au cristal violet. Ces deux méthodes ont été utilisées pour l’évaluation de l’activité de l’acide éthylèneglycol tétraacétique (EGTA) sur l’adhésion et la formation du biofilm.<p>L’amplification par PCR (Polymerase Chain Reaction) d’un fragment du gène mecA a confirmé l’appartenance des souches étudiées au phénotype SARM ou SASM. L’analyse par PCR des répétitions présentes dans la séquence codante de la protéine A de S. aureus (spa typing) a permis d’identifier 7 types spa pour toutes les souches SARM et SASM2 dont un nouveau type spa t10715.<p>Les résultats du test MATS (Microbial Adhesion to Solvents) ont montré que les souches de S. aureus sensibles et résistantes à la méticilline possédaient des propriétés membranaires différentes susceptibles de modifier l’adhésion ou la formation d’un biofilm. Les souches sensibles à la méticilline avaient une paroi plus hydrophobe que celle de souches résistantes dont la paroi était acide, acceptrice d’électrons. <p>Les études sur l’interaction entre des souches cliniques de S. aureus et des surfaces abiotiques ont montré que les souches SARM adhéraient moins vite à une surface et formaient moins de biofilms que les souches SASM. <p>Les études de l’activité de l’EGTA, un chélateur des cations divalents, ont montré que ce dernier inhibait l’adhésion de souches SARM à une surface abiotique comme un tube de cathéter et empêchait la formation d’un biofilm par toutes les souches sensibles et résistantes à la méticilline. Cette action inhibitrice sur la formation du biofilm était réversible en présence d’un cation divalent (magnésium, calcium ou manganèse). <p>L’ensemble des données obtenues sur l’adhésion et la formation du biofilm par la méthode de BFRT® et par celle de coloration au cristal violet ont montré que le BFRT® était la méthode de choix dans les études de l’adhésion initiale des souches de S. aureus sur une surface abiotique. Le BFRT® pourrait être utilisée dans le screening rapide de produits contre l’adhésion bactérienne à la surface des implants médicaux à base de polystyrène ou de silicone.<p> / Doctorat en Sciences biomédicales et pharmaceutiques / info:eu-repo/semantics/nonPublished

Introduction. La détection précoce des infections par un système de surveillance efficace permet de mettre en œuvre des mesures de prévention et de contrôle adaptées. L’objectif de cette thèse était d’évaluer les performances d’un système de détection automatique, type syndromique, des patients à risque épidémique à partir des données du dossier médical informatisé des urgences. Population d’étude. 101001 patients ayant consulté aux urgences du groupement Nord des Hospices Civils de Lyon, entre le 01/06/2007 et le 31/03/2011, dont 10895 patients hospitalisés dans l’établissement à l’issue de la consultation. Méthode. Trois étapes ont été nécessaires. 1) Évaluation de la faisabilité d’utiliser les données structurées et textuelles, à l’aide d’une application de traitement automatisé des données textuelles. 2) Construction et évaluation d’algorithmes de repérage, pour les syndromes respiratoire, cutané et gastro-intestinal, de patients avec une infection à risque épidémique à partir des données du dossier médical informatisé des urgences. 3) Évaluation des données du dossier médical des urgences pour la détection d’épidémies communautaires de grippe, comparées aux données régionales de surveillance de la grippe. Résultats et Discussion. Cette thèse a montré que qu’il est possible de repérer des patients à risque épidémique avec une balance raisonnable entre la sensibilité et la spécificité pour des syndromes respiratoires et cutanés. Les algorithmes pour des syndromes gastro-intestinaux n'étaient pas assez spécifiques pour une utilisation de routine. Les données d’urgences ont permis aussi de détecter les épidémies communautaires dès le début de l’épidémie locale / Introduction. The early detection of the infections by an effective surveillance system allows implementing adapted measures of prevention and control. The objective of this thesis was to estimate the performances of an automatic system syndromic-like to detect the patients with potentially transmissible infectious diseases from the emergency department computerized medical record data. Study population. 101,001 adults, who were admitted to the emergency department and hospitalised of the North Hospital In University Hospital of Lyon, between 01/06/2007 and 30/03/2011. Method. Three steps were necessary. 1) Evaluation of the feasibility to use the structured and textual data with an application which automatically extracts and encodes information found in narrative reports. 2) Different algorithms were built for the detection of patients with infectious respiratory, cutaneous or gastrointestinal syndromes, and assessed. 3) Evaluation of the data of the electronic medical record of emergency department for the detection of flu community epidemics, compared with regional surveillance networks for flu. Results and discussion. This thesis showed that it is possible to detect patients with potentially transmissible infectious diseases with reasonable balance between sensitivity and specificity for respiratory and cutaneous syndromes. The algorithms for gastrointestinal syndromes were not specific enough for their routine use. Emergency department data enabled the detection of community outbreaks for flu

The literature directly comparing the epidemiology of MRSA among adult and pediatric hospitalized patients is strikingly minimal. The objective of this thesis was to identify any differences between these two patient groups. The Canadian Nosocomial Infections Surveillance Program MRSA data (1995 to 2007: n=1,262 pediatric and 35,907 adult cases) were used to compare MRSA clinical and molecular characteristics and rates. Hospital characteristics were modeled using repeated measures Poisson regressions. The molecular and epidemiological characteristics of MRSA differed significantly between adults and children. Compared to children, MRSA in adults was more likely to be healthcare-associated, colonization, SCCmec type II, PVL negative, and resistant to most antibiotics. Rates of MRSA in Canada increased in both populations over time but were significantly higher in adults. The hospital characteristics associated with increased MRSA rates differed in adult and pediatric facilities. Implications for infection prevention and control strategies are discussed.

The literature directly comparing the epidemiology of MRSA among adult and pediatric hospitalized patients is strikingly minimal. The objective of this thesis was to identify any differences between these two patient groups. The Canadian Nosocomial Infections Surveillance Program MRSA data (1995 to 2007: n=1,262 pediatric and 35,907 adult cases) were used to compare MRSA clinical and molecular characteristics and rates. Hospital characteristics were modeled using repeated measures Poisson regressions. The molecular and epidemiological characteristics of MRSA differed significantly between adults and children. Compared to children, MRSA in adults was more likely to be healthcare-associated, colonization, SCCmec type II, PVL negative, and resistant to most antibiotics. Rates of MRSA in Canada increased in both populations over time but were significantly higher in adults. The hospital characteristics associated with increased MRSA rates differed in adult and pediatric facilities. Implications for infection prevention and control strategies are discussed.