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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
201

Nouveaux complexes de fer pour la modélisation du site actif des hydrogénases [FeFe] ou pour la commutation & Synthèse et caractérisation d'aminoesters isoxazoliniques / New iron complexes for the modeling of the active site of hydrogenases [FeFe] or for switching & Synthesis and characterization of isoxazolinic amino-esters

Motei, Rachid 28 December 2017 (has links)
Dans la première partie de ce travail, nous avons réalisé une étude préliminaire qui avait pour objectif d’étendre la série de complexes dinucléaires du fer [Fe2(CO)4(k2-P2N2)(μ-dithiolate)], comprenant des ligands diphosphine de type P2N2, à des complexes possédant un pont azadithiolate en vue d’étudier leur comportement en milieu acide et le rôle des différentes bases présentes dans la seconde sphère de coordination de ces composés. Les nouveaux complexes [Fe2(CO)6(k2-PPh2NR2)(μ-adtBn)] (R = Ph, Bn)) ont été obtenus par réaction entre le précurseur [Fe2(CO)6(μ-adtBn)] et les diphosphines cycliques PPh2NR2 (avec R = Ph, Bn). Ces complexes ont été caractérisés spectroscopiquement et structuralement. Nous avons aussi montré que les modes de coordination de l’anion (tcnsR)-, dans l’ensemble des complexes sont très différents et affectent, par conséquent, les réseaux cristallins d’une manière très importante. Ceci permet de dire que la longueur de la chaine alkyl de l’anion (tcnsR)- ne devrait pas être le seul paramètre structural affectant les températures de transition. Le type de groupement CN (N3, N4, N5 ou N6) intervenant dans la coordination devrait alors jouer un rôle important dans l’empilement des entités moléculaires dans le réseau cristallin et par conséquent, les interactions intermoléculaires qui sont à l’origine des caractéristiques de la transition de spin (température de transition, coopérativité,…), devraient être affectées par le mode de coordination de l’anion. Dans la seconde partie, nous avons réalisé la synthèse de notre dipolarophile à partir de la sérine et la préparation des dipôles (oxydes de nitriles). La condensation de ces derniers avec la dehydroalanine nous a permis l’obtention de nouveaux α-aminoesters isoxazoliniques. Ces nouveaux α-aminoesters isoxazoliniques ont été obtenus d’une façon très accessible, et dans des conditions douces par la réaction de cycloaddition 1,3-dipolaire. Les résultats obtenus confirment l’utilité de cette réaction comme étant une voie très efficace pour former des nouveaux isoxazolines avec des bons rendements. / In the first part of this work, we realised a preliminary study to extend the series of dinuclear iron complexes [ Fe2(CO)4 (k2-P2N2) (μ-dithiolate)], including diphosphine ligands type P2N2, to complexes having an azadithiolate bridge, in order to study their behavior in acid medium and the role of different bases present in the second coordination sphere of these compounds. The new complexes [Fe2 (CO) 6 (k2-PPh2NR2) (μ -adtBn)] (R = Ph, Bn)) were obtained by reaction between the precursor [Fe2(CO)6(μ -adtBn)] and the cyclic diphosphines PPh 2NR2 (with R = Ph, Bn). These complexes have been spectroscopically and structurally characterized. We have also showed that the anion coordination modes (tcnsR)– in all these complexes are very different and affect, consequently, crystal lattices in a very important way. This suggests that the length of the alkyl chain of the anion (tcnsR)- should not be the only structural parameter affecting transition temperatures. The type of CN grouping (N3, N4, N5 or N6) involved in the coordination should then play an important role in the stacking of molecular entities in the crystal lattice as a result the intermolecular interaction, which are the origin of the spin transition characteristics (transition temperature, cooperativeness, ...), should be affected by the coordination mode of the anion.In the second part, we have realized the synthesis of our dipolarophile from serine and the preparation of dipoles (nitrile oxides). Their condensations with dehydroalanine allowed us to newly obtain isoxazolinic α-aminoesters. These novel isoxazolinic α-aminoesters were obtained in an accessible method, and under mild conditions by the 1,3-dipolar cycloaddition reaction. The obtained results prove the usefulness of this reaction as being a very efficient way to form new isoxazolines with good yields.
202

Complexes asymétriques de NiII et CuII à ligands base de Schiff tridentates ONO, précurseurs de nouveaux adduits dipolaires push-pull : étude de leurs propriétés optiques non linéaires du second ordre (ONL-2) / Asymmetric complexes of NiII and CuII based in tridentate ONO Schiff base ligands, precursors of new dipolar push-pull adduct : study of their second-order nonlinear optical properties (NLO-2) / Complejos Asimétricos de NiII y CuII conteniendo ligandos bases de Schiff ONO, precursores de nuevos aductos dipolares pushpull : estudio de sus respuestas directas y moduladas en óptica no-lineal de segundo orden (ONL-2)

Novoa Serrano, Néstor-Alonso 19 June 2015 (has links)
Les précurseurs de ligands base de Schiff électro-donneurs et électro-accepteurs R-ONOH₂ sont préparés par réaction de monocondensation entre les β-dicétones appropriées et respectivement le 1,2- et le 1,2-4-nitro-aminophénol. Ils existent exclusivement sous leurs formes tautomériques céto-énamine en solution et à l'état solide. Dans les complexes correspondants de NiII et de CuII, le métal adopte une géométrie plan carré et est coordiné par les atomes d'azote et d'oxygène du ligand dianionique tridentate et par l'azote du coligand pyridine. L'hyperpolarisabilité quadratique, déterminée par la technique DHL est très élevée. La substitution de la pyridine par la 4,4'-bipyridine conduit systématiquement aux complexes dimériques correspondants. Un composé similaire comportant l'espaceur bis(4-pyridyle)acétylène est formé après réaction de couplage croisé de Sonogashira. Cette même réaction de couplage croisé entre les blocs de construction électrodonneurs et électro-accepteur permettent de préparer le système «push-pull» D-π-A désiré. Les réponses ONL du second ordre des complexes contenant le ligand électro-actif methylène-pyrane peuvent être modulées par bi- (R = An) et tétra- (R = Fc) oxydation réversible avec formation/rupture d'une liaison C-C, constituant ainsi un nouvel exemple de commutateur ONL-2 réversible. / Electron donating and electron withdrawing ligand precursors R-ONOH₂ were prepared by monocondensation reaction of the appropriate β-diketones and 1,2- and 1,2-4-nitro-aminophenol, respectively. They do exclusively exist as their enaminone tautomeric form both in solid-state and in solution phase. In their corresponding Schiff base complexes of NiII and CuII, the central metal is tetracoordinated in a square-planar environment. The coordination sphere is formed by the nitrogen and oxygen atoms of the dianionic tridentate ligand and the fourth coordination site is occupied by the nitrogen atom of the pyridine co-ligand. The derivative exhibited a high quadratic hyperpolarizability (β1.91) determined by the HLS technique. Substitution of 4,4’-bipyridine for pyridine invariably leads to the formation of the respective dimers [(R-ONO)MII(4,4’-bipy)MII(ONO-R)]. A similar compound having the bis(4-pyridyle)acetylene as spacer was formed upon cross-coupling Sonogashira reaction with ethynylpyridine chlorhydrate. The same cross-coupling reaction carried out between the electron releasing and electron withdrawing building blocks, respectively, allowed the preparation of the expected «push-pull» D-π-A system. The second-order NLO responses of compounds bearing a redox active methylenepyran ligand can be modulated upon reversible bi- (R = An) and tetra- (R = Fc) oxydation involving C-C bond formation/breaking reactions, thus forming a new class of NLO molecular switches.
203

Aplikace gradientní pružnosti v problémech lomové mechaniky / Application of the gradient elasticity in fracture mechanics problems

Klepáč, Jaromír January 2014 (has links)
The presented master’s thesis deals with the application of the gradient elasticity in fracture mechanics problems. Specifically, the displacement and stress field around the crack tip is a matter of interest. The influence of a material microstructure is considered. Introductory chapters are devoted to a brief historical overview of gradient models and definition of basic equations of dipolar gradient elasticity derived from Mindlin gradient theory form II. For comparison, relations of classical elasticity are introduced. Then a derivation of asymptotic displacement field using the Williams asymptotic technique follows. In the case of gradient elasticity, also the calculation of the J-integral is included. The mathematical formulation is reduced due to the singular nature of the problem to singular integral equations. The methods for solving integral equations in Cauchy principal value and Hadamard finite part sense are briefly introduced. For the evaluation of regular kernel, a Gauss-Chebyshev quadrature is used. There also mentioned approximate methods for solving systems of integral equations such as the weighted residual method, especially the least square method with collocation points. In the main part of the thesis the system of integral equations is derived using the Fourier transform for straight crack in an infinite body. This system is then solved numerically in the software Mathematica and the results are compared with the finite element model of ceramic foam.
204

1,3-Dipolare Cycloaddition von N2O an hochreaktive Mehrfachbindungen

Plefka, Oliver 16 June 2011 (has links)
In der vorliegenden Arbeit wird über 1,3-dipolare Cycloadditionen mit Lachgas (N2O) unter milden Reaktionstemperaturen (≈ RT) berichtet. N2O ist ein sehr unreaktives 1,3-dipolares Reagenz. Bisher in der Literatur durchgeführte 1,3-dipolare Cycloadditionen mit N2O benötigten immer sehr drastische und gefährliche Reaktionsbedingungen (bis zu 300°C und 500 atm.). Dabei entstanden nach einer (postulierten) einleitenden 1,3-dipolaren Cycloaddition von N2O an Olefine oder Alkine immer nur stickstofffreie Reaktionsprodukte. Durch den Einsatz von hochreaktiven Cycloalkinen als 1,3-Dipolarophile konnten erstmals 1,3-dipolare Cycloadditionen mit N2O bei deutlich milderen Bedingungen (–25°C bis +60°C) als den bisher bekannten durchgeführt werden. Dabei war es mit Cyclooctin und Cycloocten-5-in erstmals möglich, stabile und vollständig charakterisierbare Reaktionsprodukte zu erhalten, die alle drei Atome des addierten N2O-Moleküls enthalten. Mit 4,5-Didehydro-2,3,6,7-tetrahydro-3,3,6,6-tetramethylthiepin konnte sogar erstmals ein alpha-Diazoketon durch 1,3-dipolare Cycloaddition von N2O erhalten und dieses bei –25°C NMR-spektroskopisch untersucht werden. Diese alpha-Diazoketone entstehen aus der elektrocyclischen Ringöffnung der entsprechenden 1,2,3-Oxadiazole welche aus der Cycloaddition von N2O und dem eingesetzten Cycloalkin stammen. Mit alpha-substituierten Cyclooctinen konnten auch 1,3-dipolare Cycloadditionen mit N2O bei milden Temperaturen durchgeführt werden, um stickstofffreie Reaktionsprodukte zu erhalten.
205

Metallic Nanorod Arrays: Linear Optical Properties and Beyond

Kullock, René 19 April 2011 (has links)
Arrays of free-standing metallic nanorods are promising candidates for sensors, switches and spectroscopy. They have structure sizes much smaller than the wavelength of visible light, feature a long-axis surface plasmonic resonance (LSPR) and show metamaterial-like properties. This thesis provides a detailed investigation of their linear optical properties and highlights some nonlinear optical aspects. By means of graded structures having a tunable LSPR and three different theoretical models -- a numerical multiple-multipole method (MMP) model, a semi-analytic collective surface plasmon (CSP) model and an analytic dipolar interaction model (DIM) -- the optical properties were analyzed. Using the DIM, the experimentally observed blueshift of the LSPR in comparison to a single nanorod is confirmed and a physical explanation is provided. The LSPR strongly depends on the angle of incidence and the rod diameter. However, for a varying length the changes are small with the long-axis mode showing a lower energy limit. The detailed arrangement of the nanorods and the azimuthal angle of the incoming light plays only a minor role for small nanorod separations. Similarly, the dependence on the metal is the same as for single particles, whereas the sensitivity to the surrounding dielectric is much stronger than in the single-particle case. For longer nanorods made of silver, angle-dependent higher-order modes are observed and reproduced using MMP. The CSP model is applied and Fabry-Pérot-like oscillations of the CSPs are found. The propagating nature of these modes leads to the discovery that the p component of the transmitted light experiences a phase jump and to the observation of polarization conversion inside the structures. Negative refraction is found in nanorod arrays; it is revealed that a negative energy flux occurs only within a bandwidth given by the LSPR of a single nanorod and the array resonance. For smaller wavelengths, the in-plane component of the Poynting vector reverses, leading to an (extraordinary) positive flux. At the LSPR itself, the flux parallel to the surface is found to be zero. The negative refraction is also exploited to mimic a nanolens with structure parameters that are infact technical realizable. In the visible regime the nanolens shows a NA of 1.06 and superlens-like features such as identical rotation and linear translation of image and object. The nonlinear measurements on graded structures are conducted using femtosecond pump-probe spectroscopy resulting in kinetics showing either an increased transmission or absorption with signal changes of up to 40%. By converting them to transient spectra and by comparison with the literature, electron distribution changes at the Fermi edge and hot electrons/phonons are identified as the main reasons for the changes. Probing at the inflection points of the LSPR reveals ultrafast signals. Using transient spectra they are traced back to a short blueshift of the LSPR. / Strukturen aus frei stehenden metallischen Nanostäbchen versprechen interessante An­wendungen als Sensoren, Schalter und in der Spektroskopie. Da ihre Strukturgrößen kleiner als die Wellenlänge des sichtbaren Lichtes sind, besitzen sie eine langachsige Oberflächen­plasmonenresonanz (LSPR) und weisen metamaterialartige Eigenschaften auf. In dieser Dissertation werden die linearen und nichtlinearen optischen Eigenschaften solcher Struk­turen im Detail untersucht. Mit Hilfe von Gradientenstrukturen, die eine durchstimmbare LSPR besitzen, und dreier theoretischer Modelle – eines numerischen Modells basierend auf der Methode der mul­tiplen Multipole (MMP), eines semianalytischen Modells kollektiver Oberflächenplasmonen (CSP) sowie eines analytischen dipolaren Interaktionsmodells (DIMs) – werden die op­tischen Eigenschaften analysiert. Unter Verwendung des DIMs wird die experimentell beobachtete Blauverschiebung der LSPR im Vergleich zur Resonanz eines Einzelstäbchens bestätigt und eine physikalische Erklärung dafür geliefert. Die LSPR ist stark vom Einfallswinkel und vom Stäbchendurch­messer abhängig. Im Unterschied dazu sind die Änderungen bei einer Längenvariation klein, wobei die langachsige Mode ein unteres Energielimit aufweist. Weiterhin haben die genaue Anordnung der Stäbchen und der azimutale Winkel des einfallenden Lichtes nur einen untergeordneten Einfluss. Die Abhängigkeit vom verwendeten Metall ist analog zu einem Einzelstäbchen, während die Empfindlichkeit in Bezug auf das Umgebungsmedium wesentlich stärker ist. Längere Nanostäbchen aus Silber zeigen winkelabhängige Moden höherer Ordnung, welche mittels MMP reproduziert werden können. Das CSP-Modell wird ebenfalls darauf ange­wendet, wobei Fabry-Pérot-artige Oszillationen der CSPs entdeckt werden. Die propa­gierende Natur der CSPs führt zur Entdeckung eines Phasensprungs der p‑Komponente des transmittierten Lichtes sowie zur Beobachtung von Polarisationskonversion in den Strukturen. Nanostäbchen-Arrays weisen außerdem negative Brechung auf. Es wird gezeigt, dass ein negativer Energiefluss nur in dem Wellenlängenbereich zwischen der LSPR der Einzelstäb­chen und der Arrayresonanz auftritt. Für kleinere Wellenlängen kehrt sich die in der Ebene befindende Poynting-Vektor-Komponente um, was zu einer (außerordentlichen) positiven Brechung führt. An der LSPR selbst ist der zur Strukturebene parallele Fluss Null. Die negative Brechung wird ferner ausgenutzt, um eine Nanolinse mit realistischen Struktur­parametern zu simulieren. Im sichtbaren Bereich zeigt sie eine NA von 1,06 und super­linsenartige Eigenschaften, wie eine identische Rotation und eine lineare Translation von Bild und Objekt. Die nichtlinearen Messungen an Gradientenstrukturen werden mittels Femtosekunden-Pump-Probe-Spektroskopie durchgeführt und liefern Kinetiken, welche entweder eine ver­stärkte Transmission oder eine verstärkte Absorption mit Signalstärken von bis zu 40% aufweisen. Durch Konvertierung in transiente Spektren und Vergleich mit der Literatur werden eine veränderte Elektronverteilung an der Fermi-Kante und heiße Elektronen/Pho­nonen als Ursache für die Änderungen gefunden. Das Abtasten mit dem Probe-Puls an den Wendepunkten der Resonanz offenbart ultraschnelle Signale. Mit Hilfe der transienten Spektren wird dies auf eine kurzzeitige Blauverschiebung der LSPR zurückgeführt.
206

Математическое и компьютерное моделирование термодинамических свойств магнитных жидкостей : магистерская диссертация / Mathematical modeling and computer simulation of thermodynamic properties of ferrofluids

Втулкина, Е. Д., Vtulkina, E. D. January 2015 (has links)
Мы исследуем термодинамические свойства магнитных жидкостей с небольшими и умеренными значениями параметра диполь-дипольного взаимодействия в отсутствии внешнего магнитного поля. Магнитные жидкости моделируются монодисперсной системой дипольных твердых сфер. Построена теория, основанная на обратном кумулянтном преобразовании вириального разложения свободной энергии Гельмгольца в ряд по плотности. Методом компьютерного моделирования Mayer Sampling получены данные для пятого вириального коэффициента. По данным компьютерного моделирования получены аналитические выражения для четвертого и пятого вириальных коэффициентов. В работе были определены аналитические выражения для свободной энергии, давления, химического потенциала и коэффициента градиентной броуновской диффузии. Построенная теория хорошо согласуется с данными компьютерного моделирования в широкой области концентраций феррочастиц (φ≤4) и интенсивности межчастичного диполь-дипольного взаимодействия (λ≤4). / We investigate thermodynamic properties of ferrofluids with low and intermediate dipolar coupling constant. The model of dipolar hard spheres is observed. In this work a new theory is constructed based on the transformation of the virial expansion for the Helmholtz free energy into a logarithmic form. Analytical expressions of the forth and the fifth virial coefficients are obtained on the basis of numerical results of Mayer-sampling calculation. In this work analytical expressions for free energy, chemical potential, pressure and gradient diffusion coefficient were obtained. The comparison between theory and computer simulation shows good agreement for dipolar coupling constant λ≤4 and for particle volume fraction φ≤4.
207

New Theoretical Approaches for Solid-State NMR of Quadrupolar Nuclei with Applications to Glass Structure

Trease, Nicole Marie January 2009 (has links)
No description available.
208

Méthodologie pour la synthèse combinatoire d’azapeptides: application à la synthèse d’analogues aza-GHRP-6 en tant que ligands du récepteur CD36

Proulx, Caroline 07 1900 (has links)
Les azapeptides sont des mimes peptidiques où le carbone alpha d’un ou de plusieurs acides aminés est remplacé par un atome d’azote. Cette modification tend à stabiliser une conformation en repliement beta en raison de la répulsion électronique entre les paires d’électrons libres des atomes d’azote adjacents et de la géométrie plane de l’urée. De plus, le résidu semicarbazide a une meilleure résistance face aux protéases en plus d’être chimiquement plus stable qu’une liaison amide. Bien que les propriétés des azapeptides en fassent des mimes peptidiques intéressants, leurs méthodes de synthèses font appel à la synthèse laborieuse d’hydrazines substituées en solution. Le peptide sécréteur d’hormone de croissance 6 (GHRP-6, His-D-Trp-Ala-Trp-D-Phe-Lys-NH2) est un hexapeptide synthétique qui possède une affinité pour deux récepteurs distincts: les récepteurs GHS-R1a et CD36. Les travaux effectués au cours de mon doctorat qui seront détaillés dans cet ouvrage visent à atteindre deux objectifs: (1) le développement d’analogues du peptide GHRP-6 sélectif à un seul récepteur et (2) la mise au point d’une nouvelle méthodologie pour la synthèse combinatoire d’azapeptides. En réponse au premier objectif, la synthèse parallèle de 49 analogues aza-GHRP-6 a été effectuée et certains candidats sélectifs au récepteur CD36 ont été identifiés. L’étude de leurs propriétés anti-angiogéniques, effectuée par nos collaborateurs, a également permis d’identifier des candidats intéressants pour le traitement potentiel de la dégénérescence maculaire liée à l’âge. Une nouvelle approche pour la synthèse combinatoire d’azapeptides, faisant appel à l’alkylation et la déprotection chimiosélective d’une sous-unité semicarbazone ancrée sur support solide, a ensuite été développée. La portée de cette méthodologie a été augmentée par la découverte de conditions permettant l’arylation régiosélective de cette sous-unité semicarbazone, donnant accès à treize nouveaux dérivés aza-GHRP-6 possédant des résidus aza-arylglycines aux positions D-Trp2 et Trp4. L’élaboration de conditions propices à l’alkylation et la déprotection chimiosélective de la semicarbazone a donné accès à une variété de chaînes latérales sur l’acide aminé « aza » préalablement inaccessibles. Nous avons, entre autres, démontré qu’une chaîne latérale propargyl pouvait être incorporée sur l’acide aminé « aza ». Tenant compte de la réactivité des alcynes, nous avons ensuite élaboré des conditions réactionnelles permettant la formation in situ d’azotures aromatiques, suivie d’une réaction de cycloaddition 1,3-dipolaire sur support solide, dans le but d’obtenir des mimes de tryptophane. Sept analogues du GHRP-6 ont été synthétisés et testés pour affinité au récepteur CD36 par nos collaborateurs. De plus, nous avons effectué une réaction de couplage en solution entre un dipeptide possédant un résidu aza-propargylglycine, du paraformaldehyde et une variété d’amines secondaires (couplage A3) afin d’accéder à des mimes rigides d’aza-lysine. Ces sous-unités ont ensuite été incorporées sur support solide afin de générer sept nouveaux azapeptides avec des dérivés aza-lysine à la position Trp4 du GHRP-6. Enfin, une réaction de cyclisation 5-exo-dig a été développée pour la synthèse de N-amino imidazolin-2-ones en tant que nouveaux mimes peptidiques. Leur fonctionnalisation par une série de groupements benzyliques à la position 4 de l’hétérocycle a été rendue possible grâce à un couplage Sonogashira précédant la réaction de cyclisation. Les propriétés conformationnelles de cette nouvelle famille de composés ont été étudiées par cristallographie aux rayons X et spectroscopie RMN d’un tétrapeptide modèle. L’activité biologique de deux mimes peptidiques, possédant un résidu N-amino-4-méthyl- et 4-benzyl-imidazolin-2-one à la position Trp4 du GHRP-6, a aussi été examinée. L’ensemble de ces travaux devrait contribuer à l’avancement des connaissances au niveau des facteurs structurels et conformationnels requis pour le développement d’azapeptides en tant que ligands du récepteur CD36. De plus, les résultats obtenus devraient encourager davantage l’utilisation d’azapeptides comme peptidomimétiques grâce à leur nouvelle facilité de synthèse et la diversité grandissante au niveau de la chaîne latérale des acides aminés « aza ». / Azapeptides are peptide mimics in which the CH alpha in one or more amino acids has been replaced with a nitirogen atom. Such a modification tends to induce beta turn conformations in peptides, because of the consequences of lone–pair lone–pair repulsion between the two adjacent nitrogens and the planar geometry of the urea in the semicarbazide moiety. Furthermore, the semicarbazide increases protease resistance and is chemically more stable than its amide counterpart. Despite the potential advantages of using azapeptides mimics, their synthesis has been hampered by the solution-phase construction of substituted hydrazines prior to their incorporation into peptide sequences. Growth Hormone Releasing Peptide 6 sequence (GHRP-6, His-D-Trp-Ala-Trp-D-Phe-Lys-NH2) is a synthetic hexapeptide that binds to two distinct receptor: the Growth Hormone Secretatgogue Receptor 1a (GHS-R1a) and the Cluster of Differentiation 36 (CD36) receptor. The body of my Ph.D thesis has been generally targeted towards two objectives: (a) the development of azapeptide analogs of GHRP-6 with enhanced receptor selectivity and (b) the elaboration of a new synthetic approach for combinatorial submonomer azapeptide synthesis. In response to the first objective, 49 aza-GHRP-6 derivatives were synthesized and evaluated for receptor binding and biological activity. From this library, certain candidates were identified which exhibited decreased affinity for the GHS-R1a receptor with maintained affinity for the CD36 receptor. Furthermore, in studying their anti-angiogenic properties, our collaborators have identified aza-GHRP-6 analogs, which caused a marked decrease in microvascular sprouting in choroid explants, as well as another displaying potential to increase angiogenesis. A new approach for the combinatorial synthesis of azapeptides was developed to better conduct SAR studies using azapeptides. This method features the chemoselective alkylation and deprotection of a resin-bound semicarbazone building block. The scope of the methodology was further expanded by the development of reaction conditions for the chemoselective N-arylation of this semicarbazone residue, yielding 13 aza-GHRP-6 derivatives with aza-arylglycines residues at the D-Trp2 and Trp4 positions. The elaboration of a methodology based on the chemoselective alkylation and deprotection of a semicarbazone has allowed for greater aza-amino acid side chain diversity, enabling for example, the efficient incorporation of aza-propargylglycine residues into peptide sequences. Considering the reactivity of alkynes, we developed reaction conditions for in situ formation of aromatic azides, followed by a 1,3-dipolar cycloaddition reaction on solid support to yield aza-1-aryl,2,3-triazole-3-alanine residues as tryptophan mimics. Seven aza-GHRP-6 analogs were synthesized and subsequently tested for binding to the CD36 receptor by our collaborators. Moreover, the coupling reaction between an aza-propargylglycine-containing dipeptide building block, paraformaldehyde and a variety of secondary amines (A3 coupling) was accomplished in solution to provide access to rigid aza-lysine mimics. These aza-dipeptides were subsequently incorporated at the Trp4 position of seven new aza-GHRP-6 analogues using a solid-phase protocol, and the resulting azaLys mimics were tested for binding towards the CD36 receptor. Finally, conditions for a 5-exo-dig cyclization of an aza-propargylglycine residue were developed to give N-amino imidazolin-2-ones as turn-inducing peptide mimics. Their modification at the 4 position was achieved using a Sonogashira coupling protocol prior to the cyclization step. The conformational properties of these new heterocyclic motifs were assessed by X-ray crystallography and NMR spectroscopy on a tetrapeptide model system. The incorporation of N-amino-4-methyl- and 4-benzyl-imidazolin-2-ones at the Trp4 position of GHRP-6 was further accomplished and the biological evaluation of the peptidomimetics was examined. Taken together, these results should lead to a better understanding of the structural and conformational factors responsible for binding and biological activity of azapeptide ligands of the CD36 receptor. Furthermore, the submonomer approach for azapeptide synthesis developed should promote the use of azapeptides as peptide mimics, given its accessibility and the increased aza-amino acid side-chain diversity available.
209

Synthesis with Perfect Atom Economy: Generation of Furan Derivatives by 1,3-Dipolar Cycloaddition of Acetylenedicarboxylates at Cyclooctynes

Banert, Klaus, Bochmann, Sandra, Ihle, Andreas, Plefka, Oliver, Taubert, Florian, Walther, Tina, Korb, Marcus, Rüffer, Tobias, Lang, Heinrich 25 September 2014 (has links) (PDF)
Cyclooctyne and cycloocten-5-yne undergo, at room temperature, a 1,3-dipolar cycloaddition with dialkyl acetylenedicarboxylates 1a,b to generate furan-derived short-lived intermediates 2, which can be trapped by two additional equivalents of 1a,b or alternatively by methanol, phenol, water or aldehydes to yield polycyclic products 3b–d, orthoesters 4a–c, ketones 5 or epoxides 6a,b, respectively. Treatment of bis(trimethylsilyl) acetylenedicarboxylate (1c) with cyclooctyne leads to the ketone 7 via retro-Brook rearrangement of the dipolar intermediate 2c. In all cases, the products are formed with perfect atom economy.
210

NMR Methods For The Study Of Partially Ordered Systems

Lobo, Nitin Prakash 07 1900 (has links) (PDF)
The work presented in this thesis has two parts. The first part deals with methodological developments in the area of solid-state NMR, relevant to the study of partially ordered systems. Liquid crystals are best examples of such partially ordered systems and they are easily oriented by the magnetic field used for the NMR study. They provide spectra rich in information useful for the study of structure and dynamic s of the oriented molecule. Dipolar couplings and anisotropic chemical shifts are relatively easy to obtain for these systems. However, the methodologies used for extracting the required information are constantly undergoing change, with newer ideas being used for optimal use of the technique and increasing the sensitivity of the methodology. In this thesis, existing methods used for obtaining dipolar couplings from oriented liquid crystalline samples are examined in detail and conditions for optimal use of the methods are investigated. Different approaches for enhancing the sensitivity of the techniques are also proposed. Estimation of chemical shift anisotropy of carbons for a molecule that is used as a building block for several mesogens has been obtained and its utility for estimating the order parameters of the system have been examined. The second part of the thesis deals with the application of solid state NMR methods to the study of a number of novel liquid crystalline systems and for the estimation of dynamics, order and orientation of the mesogenic molecules in the magnetic field. Chapter-2 deals with a detailed and systematic study to improve the sensitivity of cross-polarization based separated local field (SLF) NMR spectroscopy techniques such as PISEMA(Polarization Inversion Spin Exchange at the Magic Angle) and PDLF(Pro-ton Detected Local Field). The chapter has been further divided into three sections. Section-A describes the optimization procedure for cross-polarization period for reducing zero-frequency peaks in SLF experiments. Polarization Inversion(PI) is one of the important components of PISEMA and plays a crucial role in enhancing the dipolar cross-peaks and suppressing the axial-peaks. Shortening this period has the advantage of less r.f. power input into the system, thus less susceptibility to sample heating. Therefore it is crucial to arrive at the optimum condition for which maximum sensitivity and resolution are obtained. A detailed experimental investigation of the role of the initial po1arization period has been carried out for two different samples of static oriented liquid crystalline material at two different temperatures and a contact time of 2ms has been found to be optimal for such samples. Insection-B of this chapter, the initial preparation period of the experiment is considered as a possible means of increasing the sensitivity of the experiment. Thus the use of cross-polarization via the dipolar bath by the use of a diabatic demagnetization in the rotating frame(ADRF-CP) has been proposed to be incorporated into PISEMA. To understand the CP dynamics, magnetization in double-and zero-quantum reservoirs of an ensemble of spin-1/2 nuclei and their role in determining the sensitivity the experiments have been theoretically examined. Experimentally, a modification incorporating ADRF-CP is shown to result in enhancement of signal-to-noise by as much as 90% in the case of rigid single crystals of a model peptide and up to 50% in non-rigid, partially ordered liquid crystalline systems. In section-C another useful SLF technique known as PDLF spectroscopy has also been examined. In this case a sweep of one of the r.f. amplitudes(RAMP-CP),rather than ADRF is found to work well. The reason for the different behaviours has been discussed. Chapter-3 highlights two experimental approaches used to extract the chemical shift anisotropy(CSA) tensor information from rotating solids. Section-A is devoted to the measurement of the CSA values of thiophene by using MAS side band analysis, by extracting the principal values from the intensities of just a few spinning side bands. Experiments have been performed on thiophene-2 carboxylic acid and thiophene-3 carboxylic acid samples and the carbon CSA values have been obtained. In section-B, CSA values of carbons of the core unit of the liquid crystal4- hexyloxybenzoic acid (HBA) have been obtained by using the recoupling pulse sequence SUPER(Separation of Undistorted Powder patterns by Effortless Recoupling).HBA belongs to an important class of thermotropic liquid crystals which are structurally simple and often used as starting materials for many novel mesogens. As this molecule could serve as an ideal model compound, high resolution13C NMR studies of HBA in solution, solid and liquid crystalline phases have been also undertaken. The CSA values obtained from the 2D SUPER experiment showed good agreement to those computed by DFT calculations. The CSA values were used for obtaining the order parameter of the system at different temperatures. These matched well the order parameter obtained from the 13C-1 H dipolar couplings in the nematic phase determined by SLF spectroscopy at various temperatures. A knowledge of the CSA of the carbons is thus very useful, as they can be used for gaining knowledge about the system from the chemical shifts obtained from a simple 1D spectrum. In chapter-4, 1-and 2-dimensional13CNMR techniques have been utilized to obtain extensive information about some novel mesogenic molecules. Four molecules of different structure and topology have been taken up for study. These molecules have the following features. Mesogen-1 has a terminal hydroxyl group. Such systems with further modification can result in mesogenic monomers for side chain liquid crystalline polymers. Mesogen-2 has a dimethyl amino group at one end and has three phenyl groups connected by appropriate linking units that form the core. In the third case, mesogen-3, the terminal hydroxyl group of mesogen-1 is replaced with a hydrogen such that13C-1 H dipolar couplings provide directly information on molecular ordering and orientation. In the fourth case, mesogen-4, the core is built with four phenyl rings. Here the fourth ring is linked to other three rings via a flexible chain unit. In each of these cases the 2DSLFNMR experiments have been carried out where13C-1 H dipolar couplings as well as13C chemical shifts were used for obtaining the order parameters of various segments of the molecule. The data provide useful insight into the phase behaviour, ordering and orientation of the molecules. Chapter-5 discusses the applications of the natural abundance 13CNMR techniques to thiophene based mesogens, that have the potential for use in molecular electronics material. Typically, these molecules consist of phenyl rings appropriately connected by linking units with thiophene. Different core units as well as different linking units to thiophene have been considered. The six mesogens thus obtained have been investigated in detail using 1D and 2D NMR methods.13C-1 H dipolar couplings have been used to obtain ordering information, that show interesting correlation to the molecular orientation and dynamics.

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