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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
21

Development of a pneumatic sensor for measuring the torque of instrument ball bearings

Edwards, Earl Garland January 1968 (has links)
Of the studies that have been conducted on the operational characteristics of instrument ball bearings, a great majority have been in accordance with MIL-STD-206. Since tests in compliance with this specification determine bearing quality or rate bearings comparatively, nothing was known of the operational characteristics of the bearings in their final application. A few investigators have developed sensors to study torque characteristics of instrument ball bearings. However, in no case has a report been made of the effect on torque when both radial and axial loads were varied. In seeking to obtain improvements in methods of measuring small torques, a pneumatic sensor was developed for testing R-3 instrument ball bearings under varying radial and axial loads. This sensor was based upon the principle of the flapper-nozzle valve. The flapper valve consisted of two orifices in series, one of constant area, the other of variable area, which was determined by flapper position. Since the pressure between the two orifices was dependent upon flapper position, indirect measurements of torque acting on the flapper were obtained by measuring this pressure. As a result of this study, it was concluded that the pneumatic sensor accurately measured the running torque of R-3 instrument bearings. This statement was based upon good agreement with data from other investigators working under identical conditions. It was also concluded that for a range of 50 to 200 gm. radial loading, no significant effect on torque was observed. For axial loads in the same range, the torque was found to vary in proportion to the equivalent load acting on the bearing. / Master of Science
22

Papel do MuRF1 e MuRF2 sobre aspectos estruturais e funcionais de mioblastos e fibroblastos musculares esqueléticos. / Role of MuRF1 and MuRF2 on functional and structural aspects of myoblasts and fibroblasts skeletal muscle cells.

Silvestre, João Guilherme de Oliveira 08 August 2016 (has links)
As E3 ligases MuRF1 e MuRF2 tem sido descritas com importantes papéis na estabilidade de proteínas da estrutura muscular, além de contribuírem para marcação de proteínas que devem ser degradadas. Nosso objetivo foi verificar o papel de MuRF1 e MuRF2 na diferenciação de células miogênicas, além de caracterizar seu papel em fibroblastos. Foram utilizados animais nocautes para MuRF1 e MuRF2 e verificamos o processo de regeneração 28 dias após a injeção de cardiotoxina no tibial anterior. Posteriormente, através de análises in vitro, realizamos o silenciamento de MuRF1 e MuRF2 utilizando RNAis e verificamos a capacidade de diferenciação de células miogênicas. Os resultados mostram que os animais nocautes apresentaram aumento de marcadores adipogênicos. Além disso, as células silenciadas com RNAis apresentaram queda na formação de miotubos e um aumento em marcadores adipogênicos. Em fibroblastos, identificamos as E3 ligases MuRF1 e MuRF2 e o RNAi nessas células prejudicou o processo de migração. Esses resultados realçam a importância de MuRF1 e MuRF2 na diferenciação miogênica além de sugerir um importante papel para a formação correta do citoesqueleto durante a migração celular. / The E3 ligases MuRF1 and MuRF2 has been proposed to act as a linker for myofibril machinery, also by acting as an Atrogene during muscle wasting. Our aim was to verify the role of MuRF1 and MuRF2 during the myogenic differentiation of skeletal muscle and its role on skeletal muscle fibroblasts. We used MuRF1 and MuRF2 knockout mice and analyzed the regenerative process. Using in vitro analyzes, we silenced MuRF1 and MuRF2 expression by siRNA. Our results suggest that knockout mice had an important impairment on skeletal muscle regeneration, showing positive staining to white adipocytes. Moreover, siRNA on myogenic primary cultures showed impaired myotube formation and increase the expression of adipogenic markers. Another interesting finding was that skeletal muscle fibroblasts can express MuRF1 and MuRF2, and its silencing by siRNA impairs the migration capacity of fibroblasts. These results demonstrate the importance of MuRF1 and MuRF2 during myogenic differentiation of skeletal muscle and an important role at intracellular coordination of stress fiber formation of skeletal muscle fibroblasts.
23

Interactions moléculaires et cellulaires entre les protéines E3-14.7K, FIP-1 et les microtubules : application dans le transfert de gènes / Molecular and cellular interactions between proteins E3-14.7K, FIP-1 and microtubules : application in gene transfer

Pigeon, Lucie 21 December 2012 (has links)
L’objectif de la thérapie génique est de guérir des déficiences génétiques et de nombreuses maladies acquises par l'introduction d'acides nucléiques dans les cellules mammifères. Les vecteurs chimiques sont une alternative aux vecteurs viraux pour le transfert de gène, leur immunogénicité est réduite, en plus de leur faible coût et de la facilité de leur production. Jusqu'à présent, les liposomes et les polymères cationiques sont les vecteurs chimiques les plus étudiés et utilisés pour le transfert d'ADN plasmidique (ADNp) thérapeutique. Parmi les multiples barrières biologiques, la diffusion cytosolique limitée de l’ADNp est critique pour le niveau d'expression du transgène. Le but de ce travail de thèse était d'identifier un peptide de liaison à la dynéine, qui serait capable de recruter la protéine motrice dynéine et de faciliter le transport d’ADNp vers le noyau le long des microtubules. Nous avons donc étudié le réseau d'interaction de la protéine adénovirale E3-14.7K. E3-14.7K est indirectement en interaction avec la chaîne légère de la dynéine TCTEL1 par l’intermédiaire de FIP-1. Différentes techniques ont été utilisées pour analyser les interactions de ces différentes protéines telles que Bioluminescence Resonance Energy Transfer (BRET), Förster Resonance Energy Transfer (FRET), Fluorescence Lifetime Imaging (FLIM), immunoprécipitation et Laser Scanning Confocal Microscopy (LSCM). La technique de BRET nous a permis d'identifier un peptide de 20 acides aminés d'E3-14.7K (P79-98) responsable de son interaction avec FIP-1. Associé à des Quantum Dots P79-98 (P79-98-Qdot) colocalise avec les microtubules isolés et dans les cellules HeLa. Nous avons mis au point une méthode de greffage du peptide directement sur l’ADNp. Une fois greffé avec P79-98 l’ADNp est capable d'interagir avec les microtubules dans les cellules HeLa et de migrer activement jusqu’au noyau. P79-98 améliore l'efficacité de la transfection des HeLa jusqu’à 77%. / Gene therapy aims to cure genetic deficiencies and a large variety of acquired diseases by the introduction of nucleic acids into mammalian cells. As an alternative to viral gene delivery vectors, chemical vectors have been developed with reduced immunogenicity, in addition to low cost and ease of production. So far, cationic liposomes and cationic polymers are the most studied and used chemical vectors to transfer therapeutic plasmid DNA (pDNA). Among multiple biological barriers, the limited cytosolic diffusion of pDNA is critical for level of transgene expression. The goal of this work was to identify a dynein-binding peptide which would facilitate the transport of pDNA to the nucleus along microtubules. To this end, we have investigated interaction network of adenoviral protein E3 14.7K. E314.7K is indirectly interacting with Dynein Light Chain TCTEL1 through FIP-1. Different techniques have been used to analyze the protein interactions such as Bioluminescence Resonance Energy Transfer (BRET), Förster Resonance Energy Transfer (FRET), Fluorescence Lifetime Imaging (FLIM), immunoprecipitation and Laser Scanning Confocal Microscopy (LSCM). BRET technique allow us to identify a 20 amino acids peptide of E3 14.7K (P79-98) responsible for its interaction with FIP-1. Associated with Quantum Dots P79-98 (P79-98-Qdot) gave colocalizations with isolated microtubules and microtubules in HeLa cells. We have developed the grafting of the peptide directly on the pDNA. Once grafted with P79-98 pDNA is able to interact with microtubules in HeLa cells and traffick along them toward nucleus. Remarkably transfection efficiency of polyplexes is increased up to 77% in HeLa cells.
24

Efeito do hormônio tireoidiano (T3) sobre a expressão da E3 ligase Mdm2 e suas implicações na regulação do trofismo muscular. / Effects of thyroid hormone (T3) on Mdm2 E3 ligase expression and its implications in the muscle trofism regulation.

Ramos, Gracielle Vieira 16 July 2014 (has links)
Estudos preliminares através de microarray nos mostraram que a E3 ligase Mdm2 foi regulado positivamente no músculo de animais hipertireoideos. Dessa forma, nós inferimos uma possível relação de Mdm2 com a atrofia causada por T3. Para testar nossa hipótese, ratos foram induzidos ao hipertireoidismo para análises subsequentes. Concomitante com a perda de massa muscular foi confirmado um aumento da expressão de Mdm2 tanto no nível gênico (p<0.05) quanto protéico. Interessantemente, Mdm2 foi preferencialmente expresso em fibras tipo I, mostrando maior sensibilidade dessas fibras ao T3. Além disso, foi observado uma diminuição severa na expressão de Pax7/MyoD associado à superexpressão de Mdm2, sugerindo inatividade das células satélites. Surpreendentemente, a inibição de Mdm2 em miotubos cultivados provocou uma diminuição severa no diâmetro destes (~35%, p<0.05), ou seja, tal inibição foi incapaz de minimizar a proteólise muscular causada por T3. Portanto, nós concluímos que a responsividade de Mdm2 ao T3 agiria como um mecanismo compensatório numa tentativa de minimizar a proteólise muscular causada pelo hipertireoidismo. Esta conclusão é reforçada pela atrofia observada em miotubos durante a inibição de Mdm2 sem a presença de T3. / Previous studies in our lab through microarray assay observed Mdm2, an E3 ligase, up regulated in soleus muscle from hyperthyroid rats. In this sense, we inferred that Mdm2 could be related to muscle atrophy caused by T3. To test our hypothesis, rats were induced to experimental hyperthyroidism for subsequent analysis. Along the muscle mass loss, the increase on Mdm2 gene expression was confirmed (p<0.05) as well as protein expression by RT-PCR and Western Blot, respectively. Interestingly, Mdm2 was expressed predominantly in fiber I type during T3 treatment, demonstrating a higher sensibility when compared to type II fiber. Moreover, it was observed a severe decrease in Pax7/MyoD labeling, associated to an increase on Mdm2 labeling, suggesting that T3 could be associated with inactivation of satellite cells. Surprisingly, Mdm2 inhibition in myotubes have induced severe decrease on myotubes diameter (~35%, p<0.05), in other words, Mdm2 inhibition was not able to decrease muscle proteolysis during high levels of T3. Thus, the increase on Mdm2 levels could be a compensatory effect to reduce the muscle mass loss during T3 treatment. This conclusion is highlighted by the myotubes atrophy observed during the Mdm2 inhibition without T3 treatment.
25

Analyse transcriptomique du développement du grain de blé (Triticum aestivum) : implication des E3 ligases et des gènes relatifs aux hormones

Capron, Delphine 14 December 2011 (has links)
Le blé tendre, Triticum aestivum, représente une grande ressource dans l’alimentation humaine mais également dans l’industrie. En conséquence, la taille finale du grain de blé constitue une cible privilégiée des programmes de sélections variétales. Pour ces raisons, comprendre les mécanismes moléculaires qui contrôlent le développement du grain, en particulier lors des phases précoces de la mise en place des structures cellulaires et leur remplissage par des réserves, constitue un enjeu majeur. Le développement du grain de blé est un processus complexe qui nécessite l’intervention séquentielle ou combinée d’un très grand nombre de gènes et de voies métaboliques. Parmi ces voies, le métabolisme carboné (en particulier celui du saccharose), les voies de signalisation par les hormones et la voie Ubiquitine / Protéasome 26S (UPS) semblent jouer un rôle déterminant dans la taille finale et donc le rendement en grain chez les céréales. Pour étudier le développement du grain de blé tendre, des plantes de la variété Récital ont été cultivées en serre dans des conditions optimales sans contraintes. Les grains ont été récoltés à onze stades de développement après floraison, allant de 40°CJ (soit deux jours après floraison) à 500°CJ (soit 25 jours après floraison). Les ARN totaux ont été extraits à partir de ces grains et utilisés pour analyser l’expression des gènes par une approche transcriptomique, soit en utilisant une lame « dédiée », soit en utilisant une lame Nimblegen comprenant 39 179 gènes. Une analyse différentielle utilisant le test LIMMA a permis d’identifier 9284 gènes différentiellement exprimés. L’analyse globale de ces gènes a montré que des modifications transcriptionnelles majeures ont lieu entre les stades 80 et 120 °CJ ainsi qu’entre 220 et 240°CJ. La répartition de ces 9284 en 10 clusters, en fonction de leurs profils d’expression, permet d’identifier les gènes activés en début de la phase de division cellulaire chez le grain, ceux activés pendant la phase de remplissage et ceux présentant un profil dit en « cloche ». Parmi les gènes différentiellement exprimés, nous nous sommes intéressés à ceux qui codent pour des E3 ligases impliquées dans la voie UPS et aux gènes relatifs à 7 hormones végétales (auxine, acide abscissique, acide jasmonique, brassinostéroïdes, cytokinines, gibbérellines et éthylène). Nous avons alors identifié 173 gènes codant pour des E3 ligases (dont certaines sont également des récepteurs hormonaux) et 126 gènes impliqués dans les voies hormonales. Un modèle global décrivant la chronologie d’intervention de ces gènes a été proposé. La majorité des gènes E3 de type SCF (SKP1-Cullin-Fbox), APC/C, Cul3-BTB et Ubox interviendrait dans les phases précoces du développement du grain de blé. Parallèlement, la majorité des gènes relatifs à l’auxine, à l’acide jasmonique et aux brassinostéroïdes interviendrait lors des phases de divisions cellulaires alors que les gènes relatifs à l’éthylène et à l’acide abscissique interviendraient dans les phases de remplissage. Par ailleurs, une méta-analyse a été réalisée et a permis d’identifier 26 gènes candidats codants pour des E3 ligases ainsi que de 12 gènes candidats impliqués dans les voies hormonales qui seraient préférentiellement exprimés dans l’albumen, un tissu du grain à haute valeur agro-économique. Le modèle proposé et l’identification de ces gènes candidats établissent un cadre pour de futures études visant à comprendre les mécanismes moléculaires contrôlant le développement du grain de blé. / Wheat grain is an important source of food, feed, and industrial raw materials, but current production levels cannot meet world needs. Elucidation of the molecular mechanisms underlying wheat grain development will contribute valuable information to improving wheat cultivation. One of the most important mechanisms implicated in plant developmental processes is the Ubiquitin-Proteasome System (UPS). Among several implications of the UPS, it has become clear that it plays an essential role in hormone signaling. In particular E3 ubiquitin ligases, from the UPS, have been demonstrated to play critical roles in hormone perception and signal transduction. During these work, wheat cv. Recital were grown in optimum growth conditions. By comparing eleven consecutive time-points from 40°CJ (2 days after anthesis) to 500°CJ (around 25 days after anthesis), 9284 differentially expressed genes were identified during this study. A comparison of these genes in terms of time revealed dynamic transcript accumulation profiles with major re-programming events that occurred during the time intervals of 80-120°Cdays and 220-240°Cdays. The gene expression comparison allows observing genes potentially involved in cell division or grain filling stage. An emphasis was made on the E3 ligases and hormone-related genes (Abscisic acid, Auxin, Brassinosteroid, Cytokinine, Gibberellic acid, Ethylene and Jasmonic acid). 173 E3 ligase coding genes and 126 hormone–related genes were found to be differentially expressed during the cell division and grain filling stages, with a different expression profile for each family. A model describing the timing of the involvement of these genes is proposed to provide a framework for the design of future experiments and for the identification of genes and pathways for further characterization. A majority of the E3 SCF (SKP1-Cullin-F-box), APC/C, Cul3-BTB and Ubox are found expressed in early wheat developmental stages (cell division stage). A majority of auxin, jasmonic acid and brassinostéroïde related genes were found to be up-regulated in early wheat developmental stages while ethylene and abscisic acid related genes were found to be activated during grain filling stage. The differential expression of genes involved in E3 ligase pathways and plant hormone signalling suggested that phytohormones and UPS crosstalk might play a critical role in the wheat grain developmental process. A meta-analysis of these genes led to the identification of 26 E3 ligase candidate genes and 12 hormones-related candidate genes that are preferentially expressed in the endosperm. The functional model that we proposed and the identification of candidate genes should help to better understand wheat grain development.
26

Analyse des mécanismes assurant la robustesse d’un événement de transdifférenciation : rôle de l’ubiquitine ligase E3 SEL-10 / Analysis of robustness in a transdifferentiation event : role of ubiquitin ligase E3 SEL-10

Delance, Cécile 17 January 2018 (has links)
Les cellules différenciées peuvent changer de destin cellulaire de manière induite ou naturelle. Afin de comprendre et connaître les acteurs et mécanismes contrôlant les processus de reprogrammation, notre laboratoire étudie le changement d'identité (ou transdifférenciation, Td) naturel d’une cellule épithéliale rectale (nommée Y) en motoneurone (nommé PDA) chez Caenorhabditis elegans. Les travaux préliminaires ont montré qu’il existe une synergie entre les modifications d’histone (jmjd-3.1 et wdr-5.1) et l’ubiquitination (sel-10). SEL-10 est une ubiquitine ligase E3 possédant un domaine Fbox et une répétition de domaines WD40. Dans cette étude, nous avons pu mettre en évidence : i) une implication du domaine Fbox, des indications sur la localisation intracellulaire de SEL-10 et un rôle inattendu du protéasome au sein de la Td. ii) un rôle de SEL-10 dans la robustesse de la Td (résistance aux stress environnementaux). iii) sel-10, jmjd-3.1 et wdr-5.1 agissent sur la transcription de gènes impliqués dans la transdifférenciation (testé par smFISH). Ainsi qu’une caractérisation du motif d’expression marqueur de Td cog-1 au cours de la redifférenciation. / Differentiated cells can change their cellular fate induced or naturally. In order to understand the mechanisms controlling reprogramming processes, our laboratory is studying the natural change in identity (or transdifferentiation, Td) of a rectal epithelial cell (named Y) and motor neuron (named PDA) in Caenorhabditis elegans.Preliminary work has shown that there is a synergy between histone modifications (jmjd-3.1 and wdr-5.1) and ubiquitination (sel-10). SEL-10 is an E3 ubiquitin ligase with a Fbox domain and WD40 repeat domain.In this study, we highlight: i) the Fbox domain involvement in the Td, indications about the intracellular localization of SEL-10 and an unexpected role of the proteasome within TD. ii) a role of SEL-10 in the robustness of the Td. iii) sel-10, jmjd-3.1 and wdr-5.1 act on gene transcription in transdifferentiation. This one was tested by smFISH and allowed the characterization of the cog-1 transdifferentiation marker expression pattern during redifferentiation.
27

Efeito do hormônio tireoidiano (T3) sobre a expressão da E3 ligase Mdm2 e suas implicações na regulação do trofismo muscular. / Effects of thyroid hormone (T3) on Mdm2 E3 ligase expression and its implications in the muscle trofism regulation.

Gracielle Vieira Ramos 16 July 2014 (has links)
Estudos preliminares através de microarray nos mostraram que a E3 ligase Mdm2 foi regulado positivamente no músculo de animais hipertireoideos. Dessa forma, nós inferimos uma possível relação de Mdm2 com a atrofia causada por T3. Para testar nossa hipótese, ratos foram induzidos ao hipertireoidismo para análises subsequentes. Concomitante com a perda de massa muscular foi confirmado um aumento da expressão de Mdm2 tanto no nível gênico (p<0.05) quanto protéico. Interessantemente, Mdm2 foi preferencialmente expresso em fibras tipo I, mostrando maior sensibilidade dessas fibras ao T3. Além disso, foi observado uma diminuição severa na expressão de Pax7/MyoD associado à superexpressão de Mdm2, sugerindo inatividade das células satélites. Surpreendentemente, a inibição de Mdm2 em miotubos cultivados provocou uma diminuição severa no diâmetro destes (~35%, p<0.05), ou seja, tal inibição foi incapaz de minimizar a proteólise muscular causada por T3. Portanto, nós concluímos que a responsividade de Mdm2 ao T3 agiria como um mecanismo compensatório numa tentativa de minimizar a proteólise muscular causada pelo hipertireoidismo. Esta conclusão é reforçada pela atrofia observada em miotubos durante a inibição de Mdm2 sem a presença de T3. / Previous studies in our lab through microarray assay observed Mdm2, an E3 ligase, up regulated in soleus muscle from hyperthyroid rats. In this sense, we inferred that Mdm2 could be related to muscle atrophy caused by T3. To test our hypothesis, rats were induced to experimental hyperthyroidism for subsequent analysis. Along the muscle mass loss, the increase on Mdm2 gene expression was confirmed (p<0.05) as well as protein expression by RT-PCR and Western Blot, respectively. Interestingly, Mdm2 was expressed predominantly in fiber I type during T3 treatment, demonstrating a higher sensibility when compared to type II fiber. Moreover, it was observed a severe decrease in Pax7/MyoD labeling, associated to an increase on Mdm2 labeling, suggesting that T3 could be associated with inactivation of satellite cells. Surprisingly, Mdm2 inhibition in myotubes have induced severe decrease on myotubes diameter (~35%, p<0.05), in other words, Mdm2 inhibition was not able to decrease muscle proteolysis during high levels of T3. Thus, the increase on Mdm2 levels could be a compensatory effect to reduce the muscle mass loss during T3 treatment. This conclusion is highlighted by the myotubes atrophy observed during the Mdm2 inhibition without T3 treatment.
28

Échapper à la mort cellulaire dans le cancer : mitophagie et régulation de la mort indépendante des caspases / Escape from cell death in cancer : mitophagy and regulation of caspase independent cell death

Villa, Elodie 12 December 2017 (has links)
Une des caractéristiques des cellules tumorales est leur habileté à échapper à la mort cellulaire. Pour y parvenir, elles ont développé une stratégie consistant à éliminer sélectivement les mitochondries endommagées par un processus de mitophagie. L’acteur principal de la mitophagie est l’ubiquitine ligase Parkin ; mais elle est mutée ou absente dans la majorité des cancers. Nous avons découvert qu’une autre ligase, ARIH1, appartenant à la même famille des RBR ligases que Parkin, est capable d’induire la mitophagie en réponse à un stress. Contrairement à Parkin, ARIH1 est surexprimée dans de nombreux cancers, notamment dans les cancers du poumon permettant ainsi une augmentation de la mitophagie conférant ainsi à ces cellules une résistance au stress induit par des agents chimiothérapeutiques. La mort cellulaire la mieux caractérisée est l’apoptose qui est directement liée à l’activation de caspases. Il a pourtant été établi qu’une inhibition des caspases ne permet pas d’empêcher la mort cellulaire car il existe la « mort cellulaire indépendante des caspases » ou CICD. Cependant, sa définition moléculaire précise reste toujours inconnue. Ainsi dans ce but, un criblage siRNA pan génomique a révélé l’importance de la voie ubiquitine/protéasome. Nous avons pu identifier en particulier une enzyme E3 ligase comme étant protectrice de la CICD. Cette enzyme est surexprimée dans de nombreux cancers et pourrait permettre aux cellules cancéreuses de résister à la CICD et favoriser la progression tumorale. En résumé, ce travail a permis de souligner l’importance des ubiquitines ligases dans les mécanismes d’échappement à la mort cellulaire mis en place par les cellules cancéreuses. / One of the hallmarks of tumor cells is their ability to escape cell death.To achieve this, they have developed a strategy of selectively removing damaged mitochondria by a process of mitophagy. The main actor of mitophagy is the ubiquitin ligase Parkin; but it is mutated or absent in the majority of cancers. We have discovered that another ligase, ARIH1, belonging to the same family of RBR ligases as Parkin, is capable of inducing mitophagy in response to stress. In contrast to Parkin, ARIH1 is overexpressed in many cancers, especially in lung cancer, allowing an increase in mitophagy conferring resistance to stress induced by chemotherapeutic agents. The most characterized cell death pathway is apoptosis, which is directly related to caspases activation. However, it has been established, that caspase inhibition does not prevent cell death because there is another type of cell death called "caspase-independent cell death" or CICD. However, its precise molecular definition is still unknown. Thus for this purpose, pan-genomic siRNA screening was performed and revealed the importance of the ubiquitin / proteasome pathway. In particular, we have been able to identify an enzyme E3 ligase as being protective towards CICD. This enzyme is overexpressed in many cancers and could allow cancer cells to resist CICD and promote tumor progression. In summary, this work has highlighted the importance of ubiquitin ligases in the escape mechanisms to cell death implemented by cancer cells.
29

Caractérisation des interactions moléculaires entre la GTPase Rac1 et son régulateur HACE1 : perspectives en infectiologie et en cancérologie / Characterization of molecular interactions between the E3 ubiquitin-ligase HACE1 and its target Rac1

Lotte, Romain 24 October 2017 (has links)
La GTPase Rac1 est une protéine de signalisation intracellulaire qui joue notamment un rôle clé dans la prolifération cellulaire. Notre laboratoire a montré que la toxine CNF1, produite par les Escherichia coli pathogènes, catalyse l’activation de Rac1. Nous avons également identifié le rôle de la E3 ubiquitine-ligase HACE1, un suppresseur de tumeur avéré, dans la régulation par ubiquitylation de Rac1 actif. S’il est prouvé que la forme activée de Rac1 est une cible d’HACE1, le mode d’interaction de ces deux protéines reste à définir ainsi que le rôle de ces interactions dans l’infection et le cancer. L’objectif de mon travail a été de caractériser les interactions moléculaires entre HACE1 et Rac1. Nous avons testé l’hypothèse que des mutations ponctuelles d’HACE1 identifiées dans les cancers pourraient interférer avec son interaction avec Rac1 et sa capacité de contrôle de la croissance cellulaire. J’ai ainsi pu mettre en évidence que 13 mutations somatiques d’HACE1 issues de tumeurs séquencées altèrent sa fonction de contrôle de la croissance cellulaire. De plus, l’étude de ces mutations nous a permis d’identifier un groupe d’acides aminés, situés sur les ankyrin-repeats 5 à 7 d’HACE1, qui contrôle l’interaction d’HACE1 avec Rac1 et de ce fait son ubiquitylation. Enfin dans cette étude nous précisons le rôle du domaine intermédiaire d’HACE1 (MID) dans la spécificité d’interaction de la ligase avec la forme active de Rac1. In fine, la caractérisation de mutants d’interaction entre HACE1 et Rac1 ainsi que l’effet de la toxine CNF1 sur cet axe de signalisation doit nous renseigner sur l’importance de cette voie de régulation dans le cancer et l’infection. / The small GTPase Rac1 plays a key role in various intracellular signaling pathways including cell proliferation. Our laboratory has shown that the CNF1 toxin, produced by pathogenic Escherichia coli, catalyzes the activation of Rac1. We also identified the role of the E3 ubiquitin-ligase HACE1, a tumor suppressor, in the regulation by ubiquitylation of active Rac1. If the activated form of Rac1 is proved to be a target of HACE1, the mode of interaction between these two proteins remains to be define as well as the role of these interactions in infection and cancer. The aim of my work was to characterize the molecular interactions between HACE1 and Rac1. We tested the hypothesis that HACE1 point mutations identified in cancers could interfere with its interaction with Rac1 and its ability to control cell growth. We showed that 13 cancer-associated somatic mutations of HACE1, led to a defective control of cell proliferation. Moreover, the study of these mutations allowed us to identify a group of amino acids, located on the ankyrin-repeats 5 to 7 of HACE1, which controls the interaction of HACE1 with Rac1 and thus its ubiquitylation. We also identified a role for the intermediate domain of HACE1 (MID) in conferring the specificity of association of HACE1 to the active form of Rac1. Ultimately, the characterization of interaction mutants between HACE1 and Rac1 as well as the effect of the CNF1 toxin on this signaling axis will give us more insight on this regulatory pathway in cancer and infection.
30

Studie vztahující se k biologické funkci E3 ligázy Rnf121 in vivo a in vitro / Studies towards biological function of ubiquitin E3 ligase Rnf121 in vivo and in vitro

Škarabellová, Kateřina January 2016 (has links)
Although the RING finger protein 121 (RNF121) is a highly conserved E3 ubiquitin ligase from Caenorhabditis elegans to human, its function is poorly understood and in higher eukaryotes it has been studied only at in vitro level. RNF121 has been described to have various functions: i) it was ascribed to function as a broad regulator of NF-κB activation, ii) it was shown to control intracellular trafficking of various membrane proteins, and iii) its downregulation leads to apoptosis. Moreover, RNF121 might have a role in cancer as its expression was found to be 16.4-fold higher in patients suffering from Barrett esophagus (precancerous lesion of esophageal adenocarcinoma) and was even more increased in esophageal adenocarcinoma comparing to healthy population. In addition, RNF121 gene is localized in the candidate region containing breast cancer susceptibility genes. To gain insight into physiological functions of RNF121, Rnf121 knockout mice (Rnf121tm1b(EUCOMM)Hmgu ) were generated in the Czech Centre for Phenogenomics and further studied in our laboratory. Rnf121+ /- intercross breedings showed a prenatal lethal phenotype of Rnf121-/- embryos, which were dying prior embryonic day (E) 11.5. Preliminary experiments carried out in our laboratory showed numerous vascular defects in null mutant embryo,...

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