This study used the non-alcoholic steatohepatitis activity index (NAI), presence of fibrosis and Mallory-Denk bodies (MDBs), and quantification of glucose regulated protein 78 (GRP78) messenger ribonucleic acid (mRNA) as indicators of steatohepatitis development and recovery in the American mink (Neovison vison). Mink were fasted for 0, 1, 3, 5, or 7 days, and one group re-fed 28 days post 7-day fast. Liver NAI indicated that moderate fatty liver developed after 5 days of fasting. Liver recovery was achieved after the re-feeding period. There was no evidence of fibrosis or MDB formation. Upregulation of GRP78 was observed by day 7 of fasting indicating endoplasmic reticulum stress. This effect was greater in females. Results suggest that liver steatosis did not advance to steatohepatitis within a 7-day fast. However, should the length of fast be increased the mink may be at risk. Results also show that liver recovery from simple fatty liver is possible.

Endoplasmic reticulum (ER) stress has been implicated as a causative factor in the development of pancreatic beta-cell dysfunction and death resulting in type 2 diabetes. This thesis examined the role of ATF6beta in the ER stress response of beta-cells. Using an ATF6beta-specific antibody, expression of full-length ATF6beta was detected in various insulinoma cell lines and rodent islets and the induction of the active form (ATF6beta-p60) under ER stress conditions. Knock-down of ATF6beta in INS-1 832/13 cells did not affect mRNA induction of known ER stress response genes in response to tunicamycin-induced ER stress, however it increased the susceptibility of beta-cells to apoptosis. Conversely, overexpression of ATF6beta-p60 reduced the apoptotic phenotype. Microarray results suggest ATF6beta functions to induce expression of adaptive genes also regulated by ATF6alpha, but also several specific targets genes. These findings have increased our understanding of the role of ATF6beta in the ER stress response of beta-cells.

Endoplasmic reticulum (ER) stress has been implicated as a causative factor in the development of pancreatic beta-cell dysfunction and death resulting in type 2 diabetes. This thesis examined the role of ATF6beta in the ER stress response of beta-cells. Using an ATF6beta-specific antibody, expression of full-length ATF6beta was detected in various insulinoma cell lines and rodent islets and the induction of the active form (ATF6beta-p60) under ER stress conditions. Knock-down of ATF6beta in INS-1 832/13 cells did not affect mRNA induction of known ER stress response genes in response to tunicamycin-induced ER stress, however it increased the susceptibility of beta-cells to apoptosis. Conversely, overexpression of ATF6beta-p60 reduced the apoptotic phenotype. Microarray results suggest ATF6beta functions to induce expression of adaptive genes also regulated by ATF6alpha, but also several specific targets genes. These findings have increased our understanding of the role of ATF6beta in the ER stress response of beta-cells.

Oestrogens are female sex hormones. Both natural and synthetic oestrogens have been found in many aquatic environments. There are three naturally occurring oestrogens – oestradiol, estriol and estrone. Oestradiol (correctly known as 17β oestradiol or E2) is a naturally occurring steroid hormone and is the most potent of these three. Diethylstilbestrol, dienestrol, quinestrol etc are synthetic oestrogens. These environmental steroidal and nonsteroidal oestrogens act as endocrine disruptors (EDs). Both types of oestrogens in the environmental samples can be quantified using several laboratory methods such as high pressure liquid chromatography (HPLC), gel permeation chromatography (GPC) etc. but they often require extensive training to perform. Arxula adeninivorans is biotechnologically significant dimorphic yeast with unusual characteristics. It can use a wide range of substrates and it is thermotolerant, osmotolerant and halotolerant. It is a non-pathogenic fungus and is therefore ideal for use in industrial settings. It is a source of many enzymes and a wide range of transformation platforms have been developed to enable the production of foreign proteins. In this project, A.adeninivorans was transformed with histidine-tagged synthetic oestrogen binding protein (EBP) gene based on the Candida albicans EBP sequence. The recombinant EBP expressed in the yeast Arxula is separated using HisTrap columns. Linear sweep voltammetry was used for the detection of EBP redox responses to oestrogen in solution. A three-electrode configuration was used for all measurements [auxiliary electrode (platinum wire), reference electrode (Ag/AgCl) and working electrodes (Pt 50μm diameter micro-disc and 2 mm diameter glassy carbon)]. Electron transfer from EBP to electrodes will require the use of a mediator system and TMPD, a lipophilic mediator used in this experiment. Screen printed electrodes (SPEs) were used to detect the interaction between EBP and oestrogen. To perform experiment with SPE, EBP was immobilized on SPE using the crosslinker glutaraldehyde. Differential pulse voltammetry (DPV) was used to detect interactions of EBP and oestrogen on SPE. Immobilion N transfer membrane was impregnated with TMPD solution and electrochemistry (DPV) was performed. The purpose of using membrane is to simulate the immobilization of TMPD on SPE along with EBP for the detection of oestrogen.

An increasing body of evidence points to a key role of endoplasmic reticulum (ER) stress in chronic and acute neurodegenerative diseases. Indeed, markers of ER stress are common features of neurons destined to die in these conditions. In the present study we demonstrate that PUMA, a BH3-only member of the Bcl-2 family is essential for ER stress-induced cell death. PUMA is known to be a key transcriptional target of p53, however we have found that ER stress triggers PUMA induction and cell death through a p53-independent mechanism involving instead the ER stress inducible transcription factor ATF4. Specifically, we demonstrate that ectopic expression of ATF4 sensitizes neurons to ER stress induced apoptosis, and that ATF4-deficient neurons exhibit markedly reduced levels of PUMA expression and cell death. However, chromatin immunoprecipitation experiments suggest that ATF4 does not directly regulate the PUMA promoter. Rather, we found that ATF4 induces expression of the transcription factor CHOP, and that CHOP in turn directly activates PUMA induction. Specifically, we demonstrate that CHOP binds to the PUMA promoter during ER stress and that CHOP knockdown attenuates PUMA induction and neuronal apoptosis. In summary, we have identified a key signaling pathway in ER stress induced neuronal death involving ATF4-CHOP mediated transactivation of the pro-apoptotic Bcl-2 family member PUMA. Protein aggregates and markers of ER stress response have also been observed in dying neurons in several animal models of cerebral ischemia. Therefore, to decipher the significance of the ER stress apoptotic response, we investigate the role of ATF4-CHOP signaling pathway in ischemic neuronal injury. Ischemic stroke results from a transient or permanent reduction in cerebral blood flow in the brain. In spite of much research in trying to develop therapeutic strategies, most clinical trials have failed. These failures demonstrate that effective treatments require a more complete understanding of molecular signals that lead to neuronal death. However, stroke is a complex scenario since distinct mechanisms may involve in rapid and/or delayed neuronal death. The signaling pathways regulating these mechanisms however are not fully defined. Previous studies had suggested that ER stress playing a pivotal role in post-ischemic neuronal death. Yet, the relevance of ER stress signals was not fully known in ischemic neuronal injury. Accordingly, this thesis research attempts to explore the functional role of ER stress -inducible pathway, ATF4-CHOP axis, in different models of neuronal death (delayed and excitotoxic cell death) evoked by ischemia. The data indicates that ATF4 is essential in delayed type of death in vitro. In focal ischemia model (tMCAO) ATF4 also plays a role as a mediator of death signal in vivo. However, CHOP function looks more complex, and our data did not support the role of CHOP in ischemic neuronal death.

Meningioma and glioma are the most common primary brain tumors, but their etiologies are largely unknown. Although meningioma is usually benign, their intracranial location can lead to lethal consequences, and despite progress in surgery, radiotherapy, and chemotherapy the prognosis for patients with glioma remains poor. The only well-established environmental risk factor for meningioma and glioma is ionizing radiation. Evidence for inherited predisposition to meningioma and glioma is provided by a number of rare inherited syndromes where collectively these diseases account for only a small proportion of the twofold increased risk of brain tumors seen in first-degree relatives for meningioma and glioma patients. It is very possible that much of the excess familial risk is a consequence of co-inheritance of multiple low-risk genetic variations. With this in mind, the aims of the studies in this thesis were to discover genetic risk variants influencing the probability of acquiring the disease and to identify the association between risk variants on the tumor phenotype. To identify genetic variants influencing meningioma risk, a comprehensive tagging of the selected genes in a case-control study was performed. We identified nine risk variants in EGF, ERBB2, and LRIG2 genes. However, these findings could not be confirmed in another larger independent dataset. In addition, the study identified a correlation between LRIG2 protein expression and ER status when analyzed with different parameters. In a separate study with a larger sample of meningioma patients, the same correlation between LRIG2 and ER status was observed. To explore the potential association between reported germline risk variants and somatic genetic events, matched tumor and blood samples from glioma patients were analyzed by SNP array. The results identified correlations between EGFR gene variants and somatic aberrations within the EGFR locus and CDKN2A/B locus. To further study the relationship between germline risk variants and tumor phenotype, the same patient material was used and analyzed by three different techniques: SNP array, IHC, and FISH. The results revealed EGFR risk variants effecting copy number variation of the EGFR gene and the expression of the IDH1 and p53. Further comparison between different techniques such as SNP array and FISH analysis revealed the difficulty in achieving consistent results with different techniques. To summarize, the glioma studies show a link between genotype and phenotype where genetic risk variants in the EGFR gene were found to be associated with specific somatic aberrations. These associations are biologically interesting because EGFR is involved in multiple cellular processes. Additional studies of the direct functional role of these observations need to be conducted to elucidate the molecular mechanisms underlying the identified association between germline gene variants and somatic aberrations. For the meningioma studies, no significant risk variants influencing the disease were found but a correlation between LRIG2 and ER status was observed. This result suggests a potential role for the LRIG protein in the pathogenesis of meningioma, but more studies are needed to confirm this hypothesizes. / <p>Cancer research foundation in northern Sweden and Lions cancer research foundation at Umeå university</p>

Thesis (M.CM)--Hong Kong Baptist University, 2006. / Dissertation submitted to the School of Chinese Medicine. Includes bibliographical references.

<p>In evolutionary robotics there has been research about the pursuit problem with different numbers of predators and prey: (i) one predator and one prey, (ii) many predators against one prey, and (iii) many predators against many prey. However, these different experiments are only involving food chains with two populations (two trophic levels). This dissertation uses three trophic levels to investigate if individuals in the middle trophic level perform equally or better than those that are been evolved in a two trophic level environment.</p><p>The investigation was done in a simulator called YAKS. A statistical analysis was conducted to evalutate the results. The result indicated that a robot with two tasks gets better at hunting and evading than robots with one task (either hunt or evade). Robots from the middle trophic level that are moving in the same direction as the camera is facing, were the best predators and prey. This dissertation is a step towards more complex and animal-like behaviours of robots.</p>

The accurate regulation of cytoplasmic dynein-1 (dynein) is very important since dynein performs multiple functions in cells. In interphase, dynein is responsible for the correct positioning of membrane organelles, such as the Golgi complex and lysosomes. Previous work suggests that dynein's accessory proteins NudEL/Nde1/LIS1¬ may be involved in regulating dynein-dependent organelle movement. This study focuses on how NudEL regulates dynein-driven membrane movement. By using various NudEL fragments, this work presents the first evidence that NudEL is involved in the regulation of dynein-driven ER movement in vitro. Moreover, the in vivo organelle positioning assays also indicate additional regulatory function of NudEL.NudEL fragment (1-157 aa) which contains both the dynein and LIS1 binding domains is sufficient to activate dynein-driven membrane movement, since NudEL1-157 aa activates ER motility in vitro and enhances clustering of the Golgi complex and lysosomes in the peri-nuclear region in vivo. On the other hand, NudEL 96-206 aa containing the LIS1 binding domain alone inhibits ER motility in vitro and causes scattering of the Golgi complex and lysosomes in vivo, indicating an inhibition of dynein-dependent organelle movement. The activation of dynein activity requires the recruitment of LIS1 to the dynein complex by NudEL, since NudEL 1-157 aa has strong binding affinity to both LIS1 and dynein whereas NudEL 96-206 aa binds to LIS1 but not dynein which suggests the sequestering of LIS1 from the dynein complex. Interestingly, NudEL 1-206 aa, which also contains both the dynein and LIS1 binding domains, causes the dispersal of the Golgi complex and lysosomes in vivo, but to a lesser extent than NudEL 96-206 aa. The putative NudEL regulatory domain (157 -242 aa, which contains various phosphorylation sits and is less conserved between NudEL and Nde1) in NudEL 1-206 aa may regulate the interaction of LIS1 and the dynein complex, since NudEL 1-206 aa has strong binding affinity to LIS1 and weak binding affinity to dynein. However, further work is needed to understand the exact mechanism by which this putative NudEL domain regulates dynein activity.

Philosophiae Doctor - PhD / Estrogens play an extraordinary role in the endocrine system regulation through the stimulation and regulation of endocrine pathways. 17β-estradiol is one of the final metabolites in estrogen regulation by hydroxylase enzymes that are well recognized for their metabolic role in hormone fragmentation and dissociation, through hydroxylation reactions that reversibly convert a series of androgens to estrogens (i.e. or one estrogen to the other). However, the 17β-estradiol hormone has been classified as one of the estrogenic endocrine disrupting compounds {i.e. EDC (s)} that show significant adverse effects in the estrogen pathways of male and female animal species. Estrogen receptor alpha (ER-α) is significantly activated by 17β-estradiol, which is a steroid hormone. A biosensor system for the determination of 17β-estradiol was developed based on the highly selective and specific physiological substrate level activation of the ER-α biomolecule by the (17β-estradiol) compound. The chemically-tuned tin selenide quantum dots capped with 3-mercaptopropionic acid were produced at room temperature and employed to capture the ER-α micro-molecule onto the electrode surfaces. These quantum dots possessed average particle size (APS) diameters between 4.6 ± 0.6 nm and an indirect band gap energy (Eg) of 3.14 eV. Surface modification on the quantum dots permitted the formation of efficient amide bonds between the capping molecules of the quantum dots and the estrogen receptor-alpha. The tin selenide quantum dots platform enhanced the surface bio-reactivity of the receptorsensor film. The receptorsensor’s sensitivity towards 17β-estradiol was 5.9 μA/μM associated with a response time (tResponse) of less than 1.2 s. The formal potential, Ep˚ˈ, of the receptorsensor-substrate complex was 149 mV. A detection limit (DL) of 1.9 nM was obtained for the electrochemical biosensing methodology. 17β-estradiol–receptorsensor response kinetics were also evaluated, where a dissociation rate (kd) of 7.6 μM/s, a 50 % inhibition concentration (IC50) value of 3.4 nM and a binding efficiency (Bmax) of 7 nM were obtained. Effective measure of 17β-estradiol concentrations as low as 3.8 nM present in surface waters have been reported to induce feminisation in male aquatic species. The receptorsensor’s dynamic linear range (DLR) nevertheless showed capability of screening a minimum of 0.2 nM to a maximum of 8 nM of the 17β-estradiol concentrations. Furthermore, during the estrogen replacement therapy (ERT), 17β-estradiol concentration levels are monitored at frequent phases, wherein 17β-estradiol concentrations from as low as 0.37 nM are recovered in the serum (i.e. this value was also evaluated to be within the receptorsensor’s-DLR), determining its future capability to be developed for; clinical-diagnosis screening of the 17β-estradiol.