Dedifferentiation and proliferation of retinal pigment epithelial (RPE) cells are characteristics of retinal diseases. Dedifferentiation is likely associated with changes of inwardly rectifying potassium (Kir) channels. The roles of Kir4.2 channels in viability, and proliferation of cultured RPE cells were investigated. Gene expression levels were determined using qRT-PCR. RPE cells expressed Kir2.1, 2.2, 2.4, 3.2, 4.1, 4.2, 6.1, and 7.1 mRNA. Kir4.2 protein was verified by immunocytochemistry and Western blotting. Kir4.2 mRNA in cultured cells was upregulated by hypoxia (hypoxia mimetic CoCl2 or 0.2% O2) and extracellular hyperosmolarity (addition of high NaCl or sucrose). Kir4.2 mRNA was suppressed by vascular endothelial growth factor (VEGF), blood serum, and thrombin whereas platelet-derived growth factor (PDGF), basic fibroblast growth factor (bFGF), and transforming growth factor-1 (TGF-1) increased it. Hyperosmotic Kir4.2 gene expression was mediated by TGF-1 receptor signaling while hypoxic gene transcription was dependent on PDGF receptor signaling. VEGF receptor-2 blockade increased Kir4.2 mRNA level under control, hyperosmotic, and hypoxic conditions. SiRNA-mediated knockdown of Kir4.2 decreased the cell viability and proliferation under control and hyperosmotic conditions. Kir4.2 channels play functional roles in maintaining the viability and proliferation of RPE cells. Downregulation of Kir4.2 by VEGF, via activation of VEGF receptor-2 and induction of blood-retinal barrier breakdown, may contribute to decreased viability of RPE cells under pathological conditions.

The HIF prolyl 4-hydroxylases (HIF-P4H) control hypoxia-inducible factor (HIF), a powerful mechanism regulating cellular adaptation to decreased oxygenation. The gastrointestinal epithelium subsists in “physiological hypoxia” and should therefore have an especially well-designed control over this adaptation. Thus, we assessed the absolute mRNA expression levels of the HIF pathway components, Hif1a, HIF2a, Hif-p4h-1, 2 and 3 and factor inhibiting HIF (Fih1) in murine jejunum, caecum and colon epithelium using droplet digital PCR.We found a higher expression of all these genes towards the distal end of the gastrointestinal tract. We detected mRNA for Hif-p4h-1, 2 and 3 in all parts of the gastrointestinal tract. Hif-p4h-2 had significantly higher expression levels compared to Hif-p4h-1 and 3 in colon and caecum epithelium. To test the roles each HIF-P4H isoform plays in the gut epithelium, we measured the gene expression of classical HIF target genes in Hif-p4h-1/, Hif-p4h-2 hypomorph and Hif-p4h-3/ mice. Only Hif-p4h-2 hypomorphism led to an upregulation of HIF target genes, confirming a predominant role of HIF-P4H-2. However, the abundance of Hif-p4h-1 and 3 expression in the gastrointestinal epithelium implies that these isoforms may have specific functions as well. Thus, the development of selective inhibitors might be useful for diverging therapeutic needs.

Das menschliche olfaktorische Epithel ist dank Stamm- und Vorläuferzellen innerhalb der Basalzellpopulation, die mit einer erhöhten Mitoserate und Regeneration von Epithelzellkomponenten auf Verletzungen oder neuronalen Verlust reagieren, zu lebenslanger Regeneration befähigt. Nichtsdestotrotz ist eine Beeinträchtigung des Geruchssinns im Alter und bei Demenzerkrankungen häufig. Etwa 80 % der über 80-jährigen und etwa 85 % der Patienten mit Alzheimer-Demenz im Frühstadium weisen eine Geruchsstörung auf. Diese ist mit einer Reduktion der allgemeinen Lebensqualität sowie gesteigerter Mortalität und psychischen Erkrankungen wie Depression und Angststörungen assoziiert. Veränderungen des histologischen Aufbaus der zugrunde liegenden anatomischen Strukturen sind anzunehmen und vorrangig für das olfaktorische Epithel (OE) weniger den olfaktorischen Bulbus (OB) beschrieben. Das Wissen über den Aufbau des menschlichen Geruchssystems und seine Veränderungen im Alter beruht jedoch auf Ergebnissen weniger deskriptiver Studien menschlicher Gewebeproben und überwiegend auf Erkenntnissen aus dem Modelltier Maus. Wenngleich murine Studien maßgeblich zu einem besseren Verständnis des Geruchssystems beigetragen haben, weist die Maus als Modelltier deutliche strukturelle Unterschiede zum Menschen auf. Detaillierte quantitative Analysen des menschlichen Geruchssystems fehlen weitestgehend. Das Ziel dieser Arbeit war es, das menschliche Geruchssystem durch eine umfangreiche qualitative und quantitative Analyse menschlicher Autopsiepräparate des olfaktorischen Epithels (OE) und olfaktorischen Bulbus (OB) zu charakterisieren und histopathologische Veränderungen über die Lebensspanne und bei Demenzerkrankungen zu beschreiben.

Objetivo: Verificar resposta após debridamento epitelial de córneas humanas. Métodos: Córneas normais foram submetidas a debridamento antes da cirurgia de enucleação. Realizou-se histologia, TUNEL, Ki67, SMA e microscopia eletrônica. Resultados: Seis córneas foram debridadas e preservadas entre ½ e 65 horas, apresentando apoptose nos ceratócitos do estroma anterior. Células estromais em proliferação foram observadas apenas no tempo de 65 horas. Miofibroblastos não foram encontrados. Uma córnea serviu de controle. Conclusões: Os eventos observados em córneas humanas após debridamento epitelial, apoptose e proliferação dos ceratócitos, foram semelhantes aos descritos em animais de experimentação / Purpose: To examine the early wound healing response to epithelial scrape in human corneas. Methods: Normal corneas had epithelial scrape prior to enucleation. Histology, TUNEL assay, Ki67, SMA and transmission electron microscopy were performed. Results: Epithelial scrape was performed in six corneas from ½ to 65 hours prior to preservation. Keratocyte apoptosis was detected in the anterior stroma in all scraped corneas. Keratocyte proliferation was detected exclusively 65 hours after scrape. No myofibroblast was detected. One cornea was not scraped (control). Conclusion: Results obtained in human corneas (keratocyte apoptosis and proliferation) were similar to animal models

Objetivo: Verificar resposta após debridamento epitelial de córneas humanas. Métodos: Córneas normais foram submetidas a debridamento antes da cirurgia de enucleação. Realizou-se histologia, TUNEL, Ki67, SMA e microscopia eletrônica. Resultados: Seis córneas foram debridadas e preservadas entre ½ e 65 horas, apresentando apoptose nos ceratócitos do estroma anterior. Células estromais em proliferação foram observadas apenas no tempo de 65 horas. Miofibroblastos não foram encontrados. Uma córnea serviu de controle. Conclusões: Os eventos observados em córneas humanas após debridamento epitelial, apoptose e proliferação dos ceratócitos, foram semelhantes aos descritos em animais de experimentação / Purpose: To examine the early wound healing response to epithelial scrape in human corneas. Methods: Normal corneas had epithelial scrape prior to enucleation. Histology, TUNEL assay, Ki67, SMA and transmission electron microscopy were performed. Results: Epithelial scrape was performed in six corneas from ½ to 65 hours prior to preservation. Keratocyte apoptosis was detected in the anterior stroma in all scraped corneas. Keratocyte proliferation was detected exclusively 65 hours after scrape. No myofibroblast was detected. One cornea was not scraped (control). Conclusion: Results obtained in human corneas (keratocyte apoptosis and proliferation) were similar to animal models

Foot-and-mouth disease virus (FMDV) is a highly infectious virus affecting cloven-hoofed animals. The most prominent of its clinical signs is the development of vesicular lesions on the feet and in or around the mouth, which are a consequence of extensive FMDV-induced epithelial cell death. Currently, there is no certain biological knowledge on why extensive epithelial cell death occurs in some FMDV-infected tissues, but not in others. Using the epithelial tissues of tongue and dorsal soft palate as examples of a tissue where lesions occur and one that does not visibly exhibit FMDV-induced cell death, this work aims to identify the potential drivers of epithelial cell death and survival. A partial differential equation (PDE) model informed by experimental data on epithelial structure, is used to test epithelium thickness and cell layer structure as potential determinants. A second PDE model investigates FMDV-interferon (IFN) dynamics and their impact on the levels of cell death and survival, while an experimental study is undertaken to provide data for model validation. The work carried out casts light on the important role of a variety of factors including FMDV replication, IFN production and release, and IFN antiviral action.

The aim of this thesis was to investigate morphogenesis in the fruit fly Drosophila melanogaster using three in vitro tissue culture systems. Primary embryonic cultures derived from Drosophila melanogaster were used to study the effect of the moulting hormone ecdysone on cells in culture. The hypothesis was that the effect of ecdysone on these primary embryonic cells would parallel events which occur during metamorphosis in vivo and therefore the primary embryonic cultures could be used as an ‘in vitro’ model system. Transgenic fly lines expressing GFP were used to visualise and identify specific cell types and it was shown that cells in primary embryonic cultures respond to ecdysone morphologically. However due to the variability of cultures it was concluded that this culture system was not suitable for use as a model system. As defined cell types were observed the development of a protocol suitable for use with the primary embryonic culture system using dsRNA in order to demonstrate RNA interference was undertaken. Although this was unsuccessful, as cells in the primary embryonic cultures appeared to be resistant to dsRNA, some technical avenues remain to be explored. The Drosophila melanogaster cell line, Clone 8+, was used to investigate cell adhesion in tissue culture. Statistical analyses were carried out and it was established that derivatives of the parent cell line, Clone 8+, showed differential adhesion and proliferation characteristics. Analysis of microarray data was carried out in order to identify genes which may be responsible for the loss of cell adhesion in Clone 8+ cell lines and the potential roles of these genes in adhesion were discussed. A gene of interest, glutactin, was identified which may be responsible for loss of cell adhesion. Antibody staining was used to establish the expression of the protein glutactin in the Clone 8+ cell lines. The expression of glutactin suggested that the Clone 8+ cell line had maintained properties of the wing disc epithelial cell-type and disruption of cell polarity was considered as a possible mechanism. It was shown that f-actin colocalised with glutactin and the role of the cytoskeleton in glutactin secretion was discussed. It was concluded that glutactin was not responsible for loss of cell adhesion in the Clone 8+ cell lines. Further analysis of the microarray data revealed potential genes that could be responsible for the loss of cell polarity in the Clone 8+ cell lines and the possibility of cellular senescence was considered. It was hypothesised that the properties of adhesion and proliferation related to their ‘in vitro’ age. In the final investigation the movement of epithelial cells in Drosophila melanogaster third instar larval imaginal discs during morphogenesis was investigated. Firstly a lumen was identified in fixed imaginal disc tissue in association with cells expressing f-actin. This result was discussed in relation to the process of dorsal closure and wound healing. Further investigations involved live imaging of the dynamic process of evagination in the imaginal wing disc using transgenic flies expressing moesin-GFP. It was concluded that the lumen was not associated with the process of wound healing and it was concluded that the lumen appeared to be the mechanism directing peripodial epithelium contraction during morphogenesis of the imaginal wing disc. Dorsal closure and the process of invagination in relation to morphogenesis of the imaginal wing disc were discussed.

Les maladies inflammatoires de l’intestin (MIIs, [MIM 266600]) sont caractérisées par une inflammation chronique au niveau du tube gastro-intestinal. Les deux principales formes sont la maladie de Crohn (MC) et la colite ulcéreuse (CU). Les MIIs résulteraient d’un défaut du système immunitaire et de l’épithélium intestinal. Ce dernier forme une barrière physique et biochimique qui sépare notre système immunitaire des microorganismes commensaux et pathogènes de la microflore intestinale. Un défaut dans la barrière épithéliale intestinale pourrait donc mener à une réponse immunitaire soutenue contre notre microflore intestinale. Les études d’association pangénomiques (GWAS) ont permis d’identifier 201 régions de susceptibilité aux MIIs. Parmi celles-ci, la région 1q32 associée à la MC (p<2x10-11) et à la CU (p<6x10-7) contient 4 gènes, dont C1orf106, un gène codant pour une protéine de fonction inconnue. Le re-séquençage de la région 1q32 a permis d’identifier une variante génétique rare de C1orf106 (MAF˂1%) associée aux MIIs (p=0,009), Y333F. Nous avons démontré que la substitution de la tyr333 par une phénylalanine semble avoir un effet sur la stabilité protéique de C1orf106 tel que démontré lors de l’inhibition de la synthèse protéique induite par le cycloheximide. Nous avons déterminé que C1orf106 est exprimé dans le côlon et l’intestin grêle. De plus, son expression est augmentée lors de la différenciation des cellules épithéliales Caco-2 en épithélium intestinal polarisé. Son profil d’expression correspond aux types cellulaires et tissulaires affectés dans les MIIs. De plus, C1orf106 est partiellement co-localisée avec le marqueur des jonctions serrées, ZO-1. Toutefois, son marquage reproduit parfaitement celui du marqueur des jonctions adhérentes, E-cadhérine. Les jonctions serrées et adhérentes sont localisées du côté apical de la jonction intercellulaire et sont toutes deux impliquées dans l’établissement de la barrière épithéliale. Nous avons donc testé l’impact de C1orf106 sur la perméabilité de l’épithélium intestinal. Nous avons observé une augmentation de la perméabilité épithéliale chez un épithélium intestinal formé par des cellules Caco-2 sous-exprimant C1orf106. Nos résultats suggèrent que C1orf106 pourrait être le gène causal de la région 1q32. / The Inflammatory bowel diseases (IBD, [MIM 266600]) involve chronic inflammation of the digestive tract and include ulcerative colitis (UC) and Crohn’s disease (CD). IBD may result from defects in the homeostasis of immune system and intestinal epithelium. The latter forms a physical and biochemical barrier to commensal and pathogenic microorganisms. A dysfunction in the epithelial barrier may lead to a sustained immune response against the gut flora. Genome wide association studies (GWAS) have identified 200 susceptibility regions in IBD. Among these, the 1q32 region associated with risk of both CD (p<2x10-11) and UC (p<6x10-7), contains the gene C1orf106. Our targeted re-sequencing study has identified a low-frequency variant, Y333F (p=0.009) in C1orf106, a protein of unknown function and in which tyrosine333 is predicted to be phosphorylated. We demonstrated that its substitution by a phenylalanine may have an effect on C1orf106 protein stability as shown by cycloheximide treatment experiments. Our RNA expression analyses of human tissues and cell lines demonstrated that C1orf106 is mostly expressed in the small intestine and colon. It is also detectable in monocytic cell lines but more highly expressed in colonic epithelial cell lines. Furthermore, its expression is increased by 40% during differentiation of colonic epithelial Caco-2 cells into polarized epithelium. To provide further biological context, we generated colorectal LS174T cells that stably overexpress the Y333F alleles and demonstrated that it is partially localized with ZO-1, used as a tight junction (TJ) marker. We did observe tighter colocalization with E-cadherin, a canonical marker for adherens junctions (AJ), typically located below the TJ complex. AJ and TJ play an essential role in the establishment of epithelial barrier. The localization of C1orf106 at these regions suggests its possible implication in epithelial barrier homeostasis. Using trans-epithelial measurement of ions movement across epithelium, we demonstrated an increased in permeability of an epithelium formed by C1orf106 knock-down Caco-2 cells. Our results suggest that C1orf106 could be the causal gene of the 1q32 susceptibility region.

Le transport de Na+ par ENaC et de Cl- par CFTR, dans l’épithélium des voies aériennes (VA), contrôle la clairance mucociliaire en modulant le volume du liquide de surface (ASL). L’expression et la fonction de ces canaux peuvent être modifiées au cours des maladies inflammatoires chroniques des VA. Dans un modèle de culture primaire de cellules épithéliales nasales humaines (CENH), nous avons démontré l’existence, au cours de la polypose nasosinusienne, d’une chute de la sécrétion de Cl- par CFTR dont l’expression est diminuée par le TGFß1, cytokine de l’inflammation. Nous avons ensuite étudié l’effet de l’élastase, et de son inhibiteur l’EPIhNE4 sur la fonction d’ENaC dans des CENH de patients atteints ou non de mucoviscidose (CF) où l’hyperactivité d’ENaC provoque une déshydratation de l’ASL. Nous avons démontré l’existence d’une activité sérine protéase endogène dans les CENH (patients CF ou non CF) qui, après inhibition, permet de révéler une augmentation de la fonction d’ENaC induite par l’élastase alors inhibable par l’EPI-hNE4. Enfin, nous avons analysé l’effet du 4 phenylbutyrate (4PBA), traitement proposé chez les patients CF, sur le canal ENaC. Le 4- PBA entraîne une augmentation de la fonction d’ENaC dans les CENH de patients CF ou non en adressant des sous-unités du canal à la membrane apicale via la régulation d’une molécule chaperone Hsc70. Le 4-PBA pourrait donc être utilisé dans des pathologies respiratoires avec défaut d’expression d’ENaC mais son usage pourrait être délétère chez les patients CF. La régulation des transports ioniques au cours des maladies inflammatoires chroniques des VA représente donc une cible thérapeutique intéressante / Na+ and Cl- transport by ENaC and CFTR respectively in airway epithelium (AE) control mucociliary clearance by regulating the airway surface liquid (ASL). Ion channel expression and function could be altered by chronic inflammation in AE. In primary cultures from human nasal epithelial cells (HNEC) we demonstrated, in nasal polyposis, a decrease of CFTR expression and Cl- secretion induced by TGFß1, an inflammatory cytokine. We also evaluated the effects of elastase, and its inhibitor EPI-hNE4, on ENaC function in HNEC from cystic fibrosis (CF where ENaC hyperactivity contributes to ASL dehydration) and non CF patients. We detected an endogenous serine protease activity in HNEC (CF or non CF) which, after inhibition, unmask an increase in ENaC function induced by elastase, this increase being then inhibited by EPI-hNE4. Finally, we investigated the effects of a drug now tested in CF patients treatment, the 4-phenylbutyrate (4PBA). 4-PBA promoted ENaC cell surface expression and activity in CF or non CF HNEC by increasing ENaC subunits translocation to plasma membrane via the regulation of Heat Shock Protein 70. 4-PBA treatment could therefore be of interest in the treatment of airway diseases when ENaC trafficking is disrupted but should be used with caution when treating CF patients where ENaC function is already upregulated. All together these results highlight the role of ion transport regulation during chronic inflammatory airway diseases and could lead to new therapeutic strategies

Les cellules épithéliales nasales humaines (CENH) sont des acteurs importants de la physiopathologie de la polypose naso-sinusienne (PNS), le plus souvent la PNS est primitive (étiologie inconnue), plus rarement, elle est secondaire à la mucoviscidose (PNS CF) ou la dyskinésie ciliaire primitive (PNS DCP). L'objectif de cette thèse est d'identifier des protéines différentiellement exprimées dans les PNS primitives et secondaires par approche protéomique puis de les caractériser par des techniques classiques. Dans cette étude, nous avons utilisé des cultures primaires (interface air/liquide) de CENH, dérivant de déchet per-opératoire (PNS) ou de brossages (muqueuse saine). Le marquage iTRAQ suivie d'une analyse par nano-LC-MALDI-TOF-TOF à en particulier montré : 1) une augmentation de six marqueurs du stress du réticulum endoplasmique (RE) dans la PNS primitive et la PNS CF, 2) une altération du métabolisme du glucose dans la PNS CF (sous-expression de 6 protéines dont la pyruvate kinase, enzyme clef de la glycolyse) et 3) une sous expression de 12 protéines des filaments acto-myosines dans la PNS DCP (dont 3 tropomyosines). Nous avons caractérisé le stress du RE dans la PNS primitive, montrant qu'il est induit par le biais d'une sensibilité des CENH à un stress oxydatif probablement d'origine mitochondrial et qu'il participe activement à l'inflammation (sécrétion d'IL-8 et de LTB4). Ces observations nous permettent de proposer que, dans la PNS primitive, il existe un cercle vicieux entre stress du RE, stress oxydatif et inflammation et que la sensibilité au stress oxydatif observée apparaît comme une nouvelle cible thérapeutique dans le traitement de la PNS. / Human nasal epithelial cells (HNEC) play an important role in nasal polyposis(NP). NP have generally an unknown etiology, less frequently, NP is secondary to cystic fibrosis (CF NP) or primary ciliary dyskinesia (PCD NP). The aim of this thesis is to identify differentially expressed proteins in NP, CF NP and PCD NP using proteomic approach then to characterize them by classical methodes. In this study, we used primary culture (air/liquid)of HNEC derived from NP patients (surgery waste) or healthy patients (brushing). The iTRAQ labeling folowing by nano-LC-MALDI-TOF-TOF analysis shown in particular :1)an increased expression of six endoplasmic reticulum (ER) stress markers in NP and CF NP, 2)an alteration of glucose metabolism (decreased expression of six proteins with in particular the pyruvate kinase, glycolysis key enzyme) and 3)an decreased expression of 12 acto-myosin filament proteins (in particular three tropomyosins). We caracterized the ER stress in NP showing that ER stress is activated by an oxydative stress susceptibility of NP HNEC probably of mitochondrial origin and that it directly participate to inflammation (IL-8 and LTB4 secretions). Altogether, our results underline a vicious circle that exists between oxidative stress, ER stress and inflammation.The oxydative stress susceptibility observed in NP may represent new therapeutic target in such a pathology.