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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
21

Ezrin activation in vitro: Investigation of ezrin's conformation and the interaction between ezrin and F-actin

Braunger, Julia 21 June 2013 (has links)
No description available.
22

Active and Passive Microrheology of F-Actin Membrane Composites / From Minimal Cortex Model Systems to Living Cells

Nöding, Helen 20 October 2017 (has links)
No description available.
23

Conformational Changes Of Vinculin Tail Upon F-Actin And Phospholipid Binding Studied By EPR Spectroscopy

Abé, Christoph 29 June 2010 (has links)
The cytoskeletal protein vinculin plays a key role in the control of cell-cell or cell-matrix adhesions. It is involved in the assembly and disassembly of focal adhesions and affects their mechanical stability. While many facts highlight the importance and significance of vinculin for vital processes, its precise role in the regulation of cell adhesions is still only partially understood. Various EPR methods are used in this work in order to study the vinculin tail (Vt) domain in an aqueous buffer solution and its structural changes induced by F-actin and acidic phospholipids. EPR results in combination with a rotamer library approach (RLA), MD simulation and other computational methods allowed the construction of molecular models of Vt and dimeric Vt in the presence and absence of its binding partners. Furthermore, X-band orientation selective DEER measurements were applied on a Vt double mutant. It could be shown that the determination of the mutual orientation of protein bound spin labels is possible at X-band frequencies, if the orientation correlation of the spin label pair is strong. The method established here can be used to determine valuable information about proteins and nucleic acids, expanding the virtue of DEER spectroscopy as a tool for structure determination.
24

Dynamische Strukturen am Zellcortex: Aktivierbarkeit und Akkumulation von Ezrin in Abhängigkeit von PIP2 / Dynamic structures at the cell cortex: activation and accumulation of ezrin depending on PIP2

Bosk, Sabine 18 March 2011 (has links)
No description available.
25

Verknüpfung zwischen Plasmamembran und Zytoskelett / Charakterisierung der Organisation von Ezrin und F-Aktin an artifiziellen Lipidmembranen / Linkage between Plama Membrane and Cytoskeleton / Characterizing the Organization of Ezrin and F-Actin on artificial Lipid Bilayers

Reinermann, Corinna 14 July 2016 (has links)
Die dynamische Verknüpfung zwischen Plasmamembran und dem unterliegenden Zytoskelett der Zelle ist fundamental für zelluläre Prozesse wie Zellmorphogenese, Zellmotilität und Zelladhäsion. Ezrin als Bestandteil der ERM (Ezrin, Radixin, Moesin) Proteinfamilie verbindet L-α-Phosphatidylinositol-4,5-bisphosphat (PIP2) der Plasmamembran mit filamentösem Aktin (F-Aktin) des Zytoskeletts. Die Ezrinbindung an F-Aktin wird reguliert über den Aktivierungsgrad des Proteins, welcher von der N-terminalen PIP2 Bindung und der Phosphorylierung des Threoninrests 567 abhängt. Aufgrund der Bindung an PIP2 und der Phosphorylierung wechselt Ezrin von einer inaktiven, N- und C-terminal assoziierten Konformation in einen aktivierten, geöffneten Zustand, welcher die C-terminale F-Aktinbindung ermöglicht. Ziel dieser Arbeit war es Aspekte der Verknüpfung zwischen Plasmamembran und Zytoskelett zu untersuchen. Basierend auf Bindung von Ezrin an PIP2-haltige artifizielle Lipidmembranen und der anschließenden F-Aktinbindung, wurden Bindungseigenschaften, die Organisation des F-Aktinnetzwerkes und die durch das Aktinnetzwerk beeinflusste Lipidmembranmechanik untersucht. Im ersten Abschnitt dieser Arbeit wurde der molekulare Aktivierungsprozess von Ezrin anhand der Charakterisierung von Bindungsaffinitäten und der Organisation von Ezrin an Lipidmembranen untersucht. Aufgrund einer reduzierten Proteinhöhe und FRET (FÖRSTER-Resonanzenergietransfer)-Effizienz im Fall der vollständigen Aktivierung (PIP2-Bindung und Phosphorylierung) wurde postuliert, dass Ezrin eine weniger dicht gepackte, geöffnete Konformation gebunden an Lipidmembranen ausbildet. Dies ermöglicht dem Protein C-terminal F-Aktin zu binden. Im zweiten Teil der Arbeit wurden Aktinnetzwerke an festkörperunterstützten Lipidmembranen (SLBs) immobilisiert und über Ezrin an PIP2- oder elektrostatisch an 1,2-Dioleoyl-sn-glycero-3-ethylphosphocholin (DOEPC)-haltige SLBs gebunden. Die Netzwerkorganisation wurde mit Hilfe der Fluoreszenzmikroskopie untersucht und unter Berücksichtigung der Immobilisierungsstrategie in Hinblick auf den Einfluss der Anzahl an Verknüpfungspunkten und aktinbindender Proteine (Fascin und α-Actinin) analysiert. Es konnte gezeigt werden, dass beide Immobilisierungsstrategien zu Aktinnetzwerken mit ähnlichen Eigenschaften führten, bezugnehmend auf Maschengröße und Filamentsegmentlänge. Die Aktinnetzwerkdichte konnte direkt über die Anzahl an Verknüpfungspunkten und aktinbindende Proteine (ABPs) reguliert werden, dies demonstriert die physiologische Relevanz der Ergebnisse. Es ist bekannt, dass die Aktindichte in Zellen über PIP2- und ABP-Konzentration gesteuert wird. Im dritten Teil der Arbeit wurde das etablierte Modelsystem auf poröse Substrate übertragen. Unter Kenntnis der vorangegangenen Teile der Arbeit wurde der Einfluss des F-Aktinnetzwerkes auf die Lipidmembranmechanik untersucht. Mit Hilfe der Rasterkraftmikroskopie wurden Indentationsexperimente an porenüberspannenden Lipidmembranen (PSLBs) durchführt, welche zeigten, dass ein aufliegendes F-Aktinnetzwerk die PSLBs versteift. Dies ließ sich auf die reduzierte laterale Mobilität der Lipide innerhalb der PSLBs aufgrund des Aktinnetzwerkes zurückführen, vergleichbar mit dem Picket-Fence-Modell der Plasmamembran bei welchem die Mobilität der Lipide und (Membran-)Proteine, aufgrund der Kompartimentierung der Membran durch das Aktin-Zytoskelett, eingeschränkt ist.
26

Active Matter in Confined Geometries - Biophysics of Artificial Minimal Cortices

Hubrich, Hanna 07 December 2020 (has links)
No description available.
27

Subcellular effects of pavetamine on rat cardiomyocytes

Ellis, Charlotte Elizabeth 05 January 2011 (has links)
The aim of this study was to investigate the mode of action of pavetamine on rat cardiomyocytes. Pavetamine is the causative agent of gousiekte (“quick-disease”), a disease of ruminants characterized by acute heart failure following ingestion of certain rubiaceous plants. Two in vitro rat cardiomyocyte models were utilized in this study, namely the rat embryonic cardiac cell line, H9c2, and primary neonatal rat cardiomyocytes. Cytotoxicity of pavetamine was evaluated in H9c2 cells using the MTT and LDH release assays. The eventual cell death of H9c2 cells was due to necrosis, with LDH release into the culture medium after exposure to pavetamine for 72 h. Pavetamine did not induce apoptosis, as the typical features of apoptosis were not observed. Electron microscopy was employed to study ultrastructural alterations caused by pavetamine in H9c2 cells. The mitochondria and sarcoplasmic reticula showed abnormalities after 48 h exposure of the cells to pavetamine. Abundant secondary lysosomes with electron dense material were present in treated cells. Numerous vacuoles were also present in treated cells, indicative of autophagy. During this exposure time, the nuclei appeared normal, with no chromatin condensation as would be expected for apoptosis. Abnormalities in the morphology of the nuclei were only evident after 72 h exposure. The nuclei became fragmented and plasma membrane blebbing occurred. The mitochondrial membrane potential was investigated with a fluorescent probe, which demonstrated that pavetamine caused significant hyperpolarization of the mitochondrial membrane, in contrast to the depolarization caused by apoptotic inducers. Pavetamine did not cause opening of the mitochondrial permeability transition pore, because cyclosporine A, which is an inhibitor of the mitochondrial permeability transition pore, did not reduce the cytotoxicity of pavetamine significantly. Fluorescent probes were used to investigate subcellular changes induced by pavetamine in H9c2 cells. The mitochondria and sarcoplasmic reticula showed abnormal features compared to the control cells, which is consistent with the electron microscopy studies. The lysosomes of treated cells were more abundant and enlarged. The activity of cytosolic hexosaminidase was nearly three times higher in the treated cells than in the control cells, which suggested increased lysosomal membrane permeability. The activity of acid phosphatase was also increased in comparison to the control cells. In addition, the organization of the cytoskeletal F-actin of treated cells was severely affected by pavetamine. Rat neonatal cardiomyocytes were labelled with antibodies to detect the three major contractile proteins (titin, actin and myosin) and cytoskeletal proteins (F-actin, desmin and β-tubulin). Cells treated with pavetamine had degraded myosin and titin, with altered morphology of sarcomeric actin. Vacuoles appeared in the β-tubulin network, but the appearance of desmin was normal. F-actin was severely disrupted in cardiomyocytes treated with pavetamine and was degraded or even absent in treated cells. Ultrastructurally, the sarcomeres of rat neonatal cardiomyocytes exposed to pavetamine were disorganized and disengaged from the Z-lines, which can also be observed in the hearts of ruminants that have died of gousiekte. It is concluded that the pathological alteration to the major contractile and cytoskeleton proteins caused by pavetamine could explain the cardiac dysfunction that characterizes gousiekte. F-actin is involved in protein synthesis and therefore can play a role in the inhibition of protein synthesis in the myocardium of ruminants suffering from gousiekte. Apart from inhibition of protein synthesis in the heart, there is also increased degradation of cardiac proteins in an animal with gousiekte. The mitochondrial damage will lead to an energy deficiency and possibly to generation of reactive oxygen species. The sarcoplasmic reticula are involved in protein synthesis and any damage to them will affect protein synthesis, folding and post-translational modifications. This will activate the unfolded protein response (UPR) and sarcoplasmic reticula-associated protein degradation (ERAD). If the oxidizing environment of the sarcoplasmic reticula is disturbed, it will activate the ubiquitin-proteasome pathway (UPP) to clear aggregated and misfolded proteins. Lastly, the mitochondria, sarcoplasmic reticula and F-actin are involved in calcium homeostasis. Any damage to these organelles will have a profound influence on calcium flux in the heart and will further contribute to the contractile dysfunction that characterizes gousiekte. / Thesis (PhD)--University of Pretoria, 2010. / Paraclinical Sciences / unrestricted
28

Dendritic Cell Podosome Dynamics Does Not Depend on the F-actin Regulator SWAP-70

Götz, Anne, Jessberger, Rolf 22 January 2014 (has links) (PDF)
In addition to classical adhesion structures like filopodia or focal adhesions, dendritic cells similar to macrophages and osteoclasts assemble highly dynamic F-actin structures called podosomes. They are involved in cellular processes such as extracellular matrix degradation, bone resorption by osteoclasts, and trans-cellular diapedesis of lymphocytes. Besides adhesion and migration, podosomes enable dendritic cells to degrade connective tissue by matrix metalloproteinases. SWAP-70 interacts with RhoGTPases and F-actin and regulates migration of dendritic cells. SWAP-70 deficient osteoclasts are impaired in F-actin-ring formation and bone resorption. In the present study, we demonstrate that SWAP-70 is not required for podosome formation and F-actin turnover in dendritic cells. Furthermore, we found that toll-like receptor 4 ligand induced podosome disassembly and podosome-mediated matrix degradation is not affected by SWAP-70 in dendritic cells. Thus, podosome formation and function in dendritic cells is independent of SWAP-70.
29

Dendritic Cell Podosome Dynamics Does Not Depend on the F-actin Regulator SWAP-70

Götz, Anne, Jessberger, Rolf 22 January 2014 (has links)
In addition to classical adhesion structures like filopodia or focal adhesions, dendritic cells similar to macrophages and osteoclasts assemble highly dynamic F-actin structures called podosomes. They are involved in cellular processes such as extracellular matrix degradation, bone resorption by osteoclasts, and trans-cellular diapedesis of lymphocytes. Besides adhesion and migration, podosomes enable dendritic cells to degrade connective tissue by matrix metalloproteinases. SWAP-70 interacts with RhoGTPases and F-actin and regulates migration of dendritic cells. SWAP-70 deficient osteoclasts are impaired in F-actin-ring formation and bone resorption. In the present study, we demonstrate that SWAP-70 is not required for podosome formation and F-actin turnover in dendritic cells. Furthermore, we found that toll-like receptor 4 ligand induced podosome disassembly and podosome-mediated matrix degradation is not affected by SWAP-70 in dendritic cells. Thus, podosome formation and function in dendritic cells is independent of SWAP-70.
30

F-Actin regulation of SNARE-mediated insulin secretion

Kalwat, Michael Andrew 07 October 2013 (has links)
Indiana University-Purdue University Indianapolis (IUPUI) / In response to glucose, pancreatic islet beta cells secrete insulin in a biphasic manner, and both phases are diminished in type 2 diabetes. In beta cells, cortical F-actin beneath the plasma membrane (PM) prevents insulin granule access to the PM and glucose stimulates remodeling of this cortical F-actin to allow trafficking of insulin granules to the PM. Glucose stimulation activates the small GTPase Cdc42, which then activates p21-activated kinase 1 (PAK1); both Cdc42 and PAK1 are required for insulin secretion. In conjunction with Cdc42-PAK1 signaling, the SNARE protein Syntaxin 4 dissociates from F-actin to allow SNARE complex formation and insulin exocytosis. My central hypothesis is that, in the pancreatic beta cell, glucose signals through a Cdc42-PAK1-mediated pathway to remodel the F-actin cytoskeleton to mobilize insulin granules to SNARE docking sites at the PM to evoke glucose stimulated second phase insulin secretion. To investigate this, PAK1 was inhibited in MIN6 beta cells with IPA3 followed by live-cell imaging of F-actin remodeling using the F-actin probe, Lifeact-GFP. PAK1 inhibition prevented normal glucose-induced F-actin remodeling. PAK1 inhibition also prevented insulin granule accumulation at the PM in response to glucose. The ERK pathway was implicated, as glucose-stimulated ERK activation was decreased under PAK1-depleted conditions. Further study showed that inhibition of ERK impaired insulin secretion and cortical F-actin remodeling. One of the final steps of insulin secretion is the fusion of insulin granules with the PM which is facilitated by the SNARE proteins Syntaxin 4 on the PM and VAMP2 on the insulin granule. PAK1 activation was also found to be critical for Syntaxin 4-F-actin complex dynamics in beta cells, linking the Cdc42-PAK1 signaling pathway to SNARE-mediated exocytosis. Syntaxin 4 interacts with the F-actin severing protein Gelsolin, and in response to glucose Gelsolin dissociates from Syntaxin 4 in a calcium-dependent manner to allow Syntaxin 4 activation. Disrupting the interaction between Syntaxin 4 and Gelsolin aberrantly activates endogenous Syntaxin 4, elevating basal insulin secretion. Taken together, these results illustrate that signaling to F-actin remodeling is important for insulin secretion and that F-actin and its binding proteins can impact the final steps of insulin secretion.

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