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Orientador: Leonardo Fernandes Fraceto / Tese (doutorado) - Universidade Estadual de Campinas, Instituto de Biologia / Made available in DSpace on 2018-08-25T17:48:15Z (GMT). No. of bitstreams: 1 Melo_NathalieFerreiraSilvade_D.pdf: 6651049 bytes, checksum: ddfedee0ea9cb6075585256473110550 (MD5) Previous issue date: 2014 / Resumo: Os anestésicos locais (AL) são fármacos utilizados no controle da dor crônica ou aguda. A articaína (ATC) é um AL da classe das amino-amidas que possui maior potência e menor toxicidade que a lidocaína e tem sido um fármaco de escolha em procedimentos odontológicos e anestesia epidural. As características desejáveis para um AL incluem controle da dor durante procedimentos clínicos e a diminuição da toxicidade local e/ou sistêmica. Assim, uma alternativa que tem se mostrado capaz de promover estes efeitos desejáveis é a veiculação destes fármacos em sistemas de liberação modificada. Neste sentido, as nanopartículas poliméricas (NP), nanopartículas lipídicas sólidas (NLS) e lipossomas unilamelares pequenos (SUV) são sistemas nanocarreadores capazes de promover modificação do perfil de liberação de fármacos e possuem diâmetro inferior a 1 µm. As NP são classificadas como nanoesferas (NE), compostas por uma matriz polimérica e nanocápsulas (NC), constituídas por um invólucro polimérico disposto ao redor de um núcleo oleoso ou aquoso. As NLS são constituídas por uma matriz lipídica que se apresenta sólida em temperatura ambiente. As SUV são estruturas vesiculares compostas por bicamadas de fosfolipídios que se arranjam espontaneamente em meio aquoso. Os hidrogéis são redes poliméricas que quando dispersas em mio aquoso assumem uma conformação doadora de viscosidade à formulação. O objetivo deste trabalho foi preparar e caracterizar diferentes sistemas de liberação modificada para a ATC (neutra e ionizada) incluindo NP, NLS, SUV e hidrogéis (contendo ATC livre e encapsulada) com a finalidade de melhorar suas propriedades farmacológicas visando uma futura aplicação clínica por via infiltrativa e/ou tópica. A otimização das suspensões de NP e SUV foi alcançada através de planejamento fatorial e analisada as propriedades: diâmetro médio, polidispersão, potencial zeta e eficiência de encapsulação do fármaco. Todas as suspensões foram preparadas com ATC a 2%. Foram obtidas partículas de diâmetro compreendido entre 100 e 400 nm e índice de polidispersão abaixo de 0,2. A eficiência de encapsulação alcançada foi bastante satisfatória (entre 50 e 70%). As propriedades físico-químicas das suspensões foram avaliadas em função do tempo, a fim de determinar a estabilidade das partículas. As formulações escolhidas não apresentaram grandes alterações dessas propriedades, sendo consideradas estáveis por um período de até 120 dias de armazenamento à temperatura ambiente. Ensaios de liberação in vitro demonstraram menor velocidade de liberação da ATC quando encapsulada em NP, NLS e SUV, em relação à ATC livre. Testes de citotoxicidade in vitro em culturas de células 3T3 e CHO revelaram que a ATC livre induz morte celular de maneira concentração dependente, efeito este que foi parcialmente revertido com a encapsulação da ATC em NP, NLS e SUV, indicando menor toxicidade das formulações propostas. Os hidrogéis contendo ATC livre e encapsulada demonstraram boa consistência, homogeneidade e estabilidade. Nos testes reológicos, os géis apresentaram comportamento pseudoplástico com tixotropia, o que pode melhorar a eficácia do fármaco. O gel contendo NC-PCL com ATC apresentou início de permeação mais rápido e liberação mais lenta (até 8 horas). Os resultados obtidos mostraram que foi possível preparar nanocarreadores e hidrogéis para a ATC, sendo obtidos bons resultados com alteração no perfil de liberação do fármaco e diminuição da citotoxicidade, sendo uma futura alternativa para o controle da dor / Abstract: Local anesthetics (LA) are drugs used in controlling chronic or acute pain. The articaine (ATC) is an LA of amino-amides class which have lower toxicity and higher potency than lidocaine and has been the drug of choice in dental procedures and epidural anesthesia. Desirable features for LA include pain control during clinical procedures and the reduction of local and/or systemic toxicity. Thus, an alternative that has been shown to promote these desirable effects is the placement of these drugs in modified release systems. In this regard, polymeric nanoparticles (PN), solid lipid nanoparticles (SLN) and small unilamellar liposomes (SUV) are nanocarriers systems able to promote modification of the drug release profile and have a diameter of less than 1 µM. NP is classified as nanospheres (NS), comprising a polymeric matrix and nanocapsules (NC), consisting of a polymeric shell around an oily or aqueous core. SLN are formed by a lipid matrix which appears solid at room temperature. SUV are vesicular structures composed of phospholipids bilayers which spontaneously arrange themselves in an aqueous medium. Hydrogels are polymeric networks that when dispersed in aqueous medium assume a conformation donor viscosity of the formulation. The objective of this work was to prepare and characterize different modified delivery systems for ATC (neutral and ionized form) including PN, SLN, SUV and hydrogels (containing free and encapsulated ATC) in order to improve its pharmacological properties targeting future clinical application for infiltrating and/or topically. The optimization of PN and SUV suspensions was achieved through a factorial design and analyzed the properties: mean diameter, polydispersity, zeta potential and encapsulation efficiency of the drug. All suspensions were prepared with ATC 2%. Particles were obtained with diameter between 100-400 nm and polydispersity index lower than 0.2. The encapsulation efficiency was achieved quite satisfactory (between 50 and 70%). The physico-chemical properties of the suspensions were assessed as function of time in order to determine the stability of the particles. The selected formulations showed no significant changes of these properties, being considered stable for a period of 120 days of storage at room temperature. In vitro release experiments showed slower release of ATC when encapsulated in PN, SLN and SUV, in relation to the free ATC. In vitro cytotoxicity tests on 3T3 and CHO cells revealed that the free ATC induces cell death concentration-dependent, an effect which was partially reversed by ATC in the encapsulation in PN, SLN and SUV, indicating low toxicity of the proposed formulations. The hydrogels containing free and encapsulated ATC showed good consistency, uniformity and stability. In the rheological tests, the gels exhibited pseudoplastic behavior with tixotropy, which can improve the effectiveness of the drug. The gel containing the NC-PCL with ATC showed faster onset of permeation and slower release (up to 8 hours). The results showed that it was possible to prepare hydrogels and nanocarriers for ATC, with good results in modification of drug release and decreased cytotoxicity profile, being a future alternative for pain control / Doutorado / Bioquimica / Doutora em Biologia Funcional e Molecular

The thesis entitled “Evolution of New Lipids and Molecular Gelators: Syntheses, Aggregation Properties and Applications” elucidates the design, synthesis, aggregation properties and application of new lipids based on α-tocopheryl backbone and also with triazacyclononane (TACN) moiety. This thesis also elucidates the synthesis and aggregation properties of molecular gelators based on pyrene-pentapeptide and naphthalene diimide (NDI) moiety. The work has been divided into five chapters. Chapter 1: Introduction: Self-assembled Molecular Aggregates and their Potential Applications This chapter describes the importance of different self-assemble mainly lipids and molecular gelator. Lipids mediated gene delivery, drug delivery and metal ion induced interaction are discussed. For liposomal gene delivery here we mainly describe example of cationic gemini lipids. This chapter also gives a comprehensive account of the research towards the development of novel liposomal drug delivery containing tocopheryl backbone. It also includes the utilization of liposome which could coordinate with metal ions and their interaction with different biological analyte. Here we also discuss a wide range of molecular gelator mainly based on NDI and amino acid or peptide. Chapter 2A: Physicochemical Characterization of Bilayer Membranes Derived from (±) α-Tocopherol Based Gemini Lipids and their Interaction with plasmid-DNA and Phosphatidylcholine Bilayers In this sub-chapter we discuss the membrane formation and aggregation properties of a series of (±) α-tocopherol based cationic gemini lipids (Figure 1) varying polymethylene spacer length (TnS; n = 3, 4, 5, 6, 8 and 12) are studied extensively while comparing with corresponding properties of monomeric counterpart (TM). Liposomal suspensions of all cationic lipids are characterized by atomic force microscopy (AFM), transmission electron microscopy (TEM), dynamic light scattering (DLS), zeta potential measurements and small angle x-ray diffraction studies. Aggregation properties of the gemini lipids are highly dependent on the spacer length and were significantly distinct from that of monomeric lipid (TM). Figure 1. Molecular structures of (±) α-tocopherol based cationic monomeric and six gemini lipids that differ in polymethylene spacer length. Stable monolayer formation at air water interface formation of each amphiphile is studied by Langmuir film balance technique. Interaction of liposome with plasmid DNA is studied by ethidium bromide (EB) intercalation assay. Micellar sodium dodecyl sulphate (SDS) mediated release of the plasmid DNA from various pre-formed lipoplex is also studied. Structural transformation of pDNA upon complexation with liposome is characterized by circular dichroism (CD) spectroscopy. Interaction of all tocopheryl lipids with a model phospholipid, L-α-dipalmitoyl phosphatidylcholine (DPPC) derived vesicles is thoroughly examined by differential scanning calorimetry (DSC) and DPH fluorescence anisotropy measurements. Succinctly, we perform a detailed physicochemical characterization on cationic monomeric and gemini lipids bearing tocopherol as their hydrophobic backbone. Chapter 2B: Physicochemical Characterization of Bilayer Membranes Derived from (±) α-Tocopherol Based Gemini Lipids Containing Hydroxyethyl Functionality in the Headgroups and their Interaction with plasmid-DNA and Phosphatidylcholine Bilayers This sub-chapter describes the synthesis and aggregation properties of series of tocopheryl-based monomeric and gemini cationic lipids with hydroxyethyl functionality (Figure 2) in the headgroup region. Gemini lipids of this given series differ in their polymethylene spacer -(CH2)n- chain lengths between cationic headgroups. All monomeric and gemini lipids are found to generate stable suspensions in aqueous media. Average hydrodynamic diameter and surface charge of liposome are characterized by DLS and zeta potential measurements. Atomic force microscopy and transmission electron microscopic studies show that all lipids form vesicular Figure 2. Molecular structures of (±) α-tocopherol based cationic monomeric and five new lipids with hydroxyethyl functionality in the headgroups that differ in polymethylene spacer length aggregates in aqueous media. XRD studies with the cast films of lipids reveal interdigitated bilayer arrangement of liposome. pDNA binding and release studies show that the interactions between gemini lipids and DNA depend upon the nature of head group as well as the length of the spacer between cationic head groups. Circular Dichroism (CD) spectra of lipoplex are measured to characterize structural transformation of pDNA upon complexation with liposome. DPH anisotropy and DSC studies of the DPPC-cationic lipid co-aggregates show that ~20 mol-% of of the tocopheryl gemini lipids is enough to abolish phase transition of DPPC membranes whereas more than 20 mol-% is required in case of their monomeric counterparts. Furthermore thermotropic properties of co-aggregates depend upon the length of the spacer of gemini lipid included in the mixture. Chapter 2C: Transfection Efficacies of α-Tocopherol Based Cationic Gemini Lipids with Hydroxyethyl Containing Headgroups. In this sub-chapter, we demonstrate transfection efficiency of five α-tocopheryl gemini lipid with hydroxyethyl containing headgroups (Figure 3). Co-liposomal formulations with helper lipid 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (DOPE) form highly stable formulations in water. Co-liposomal formulations with high molar ratio of DOPE (1.5:1 and 2:1) show higher transfection efficiency than liposome with low DOPE content liposome. Co-liposome of gemini lipids with longer spacer (n = 8 and 12) have higher level of luciferase expression in HepG2 cell line. In A549 and MCF-7 cell lines also co-liposomes of TH8S (2:1) are proved to be better than other co-liposome. N/P ratios of highest transfection are 1-1.5. These formulations are more potent than L2K in all three cancer cell line. The comparison with gemini lipid (T8T) without Figure 3. Molecular structures of (±) α-tocopherol based cationic gemini lipids that differ in polymethylene spacer length and helper lipid DOPE. hydroxylethyl group also proves the importance of hydroxyethyl functionalities. High serum stability of DOPE-gemini lipid formulation is attributed to tocopherol backbone and also hydroxyethyl functionalities. Circular dichroism data also show that lipoplex of DOPE-TH8S (2:1) have different conformation than the other. Relatively moderate binding efficiency and easy release of pDNA is also observed with DOPE-TH8S (2:1) in the EB-displacement assay which could be plausible reason for high transfection efficiency. Chapter 2D: Reduction Responsive Nanoliposomes of α-Tocopheryl-Lipoic Acid Conjugate for Efficacious Drug Delivery to Sensitive and Resistant Cancer Cells In this sub-chapter, we present lipid conjugates derived from biologically relevant molecules, i.e., tocopherol and lipoic acid (Figure 4). These conjugates (TL1 and TL2) are able to form stable nanoliposomes (~100 nm) that respond to the reducing environment of cells as shown by the treatments of 1,4-Dithiothreitol (DTT) and Glutathione (GSH). Figure 4. Molecular structures of tocopheryl-lipoic acid conjugates, TL1 and TL2 Nanoliposomes could efficiently load the drug (DOX) molecules and release them in response to the stimulus. Nanoliposomes are stable enough in the presence of serum and could deliver DOX inside drug sensitive and drug resistant cells in an efficient manner that is even better than the drug alone treatments as shown by means of flow cytometry and confocal microscopy analysis. DOX loaded nanoliposomal formulations show relatively less cell viability counts than those drug alone treatments. Chapter 3A: Interaction of Nickel (II) and mida ole it Triazacyclononane Modified Chelator Amphiphiles: A Potential Substrate for Immobilization of His-tag Protein on Hydrophilic Surface This sub-chapter describes two chelator amphiphiles based on 1, 4, 7-traiazaclonone (TACN) (Figure 5). These compounds could bind efficiently Ni2+ ion. Self-assemble of these amphiphiles form vesicular aggregates. Their packing properties of these amphiphiles are influence by Ni2+ and imidazole. Also influence of Ni2+ and imidazole in Langmuir monolayer isotherm of these amphiphiles at air-water interface are also studied. Figure 5. Molecular structures of TACNA chelator amphiphiles. These studies show the newly synthesized amphiphiles could immobilize histidine tagged protein on both bilayer and monolayer surface. One of these compounds with Ni2+ (C16TACNA-Ni2+) is used to transfer a His-tagged protein nucleolin on hydrophilicobic glass surface by Langmuir-Blodgett transfer technique. So, these compounds with Ni2+ could be very useful to attach different His-tagged protein or polypeptide of interest on the bilayer (liposome) or monolayer surface. Chapter 3B: Supramolecular Hosts for Enhancing the Selectivity of TACN Based Probes towards Copper (II): Differential Output Signals for Cysteine and Histidine In this sub-chapter, we have developed a new amphipathic probe compound 1 having TACN as the binding site and dansyl as signaling moiety (Figure 6). As TACN is known for its’ unspecific interaction with multiple ions, the probe shows response with most of the transition metal ions. However, incorporation into different supramolecular hosts (like micelle and vesicles) drastically improves the selectivity of compound 1 towards Cu2+ (diminution of bright green fluorescence) in water. Then we Figure 6. Molecular structures of dansylated TACN chelator amphiphiles. have also employed the Cu2+ complex of compound 1 for selective estimation of amino acids. Addition of cysteine regains the green emission of compound while histidine exhibits blue intense emission upon formation of ternary conjugate. Chapter 4: Transforming a β-Sheet Pyrenylated-VPGKG Sequence into pH Tolerent, Thixotropic Hydrogel by Arene-Perfluoroarene Interactions and Visualized Sensing of Calcium (II) Ion In this chapter we discuss self-assembly studies of a novel thermoresponsive, lipidated, pyrene-appended peptide, PyP (Figure 7). Size of the vesicular aggregates of the β-sheet forming peptide, PyP, strongly depends on the temperature of the solution in water. Further pyrene-octafluoronaphthalene (OFN) pair has been used as supramolecular synthon to induce hydrogelation of PyP in presence of equimolar amount of OFN via complementary quadrupole-quadrupole interactions. The gel shows excellent pH tolerant as well as thixotropic behavior. Detailed studies suggested the lamellar packing of the gelator in a right-handed helical fashion yielded vesicular aggregates. The sticky vesicles form gel via inter- Figure 7. Molecular structure of the Pyrenylated-VPGKG peptide (PyP) and octafluoronapthalene (OFN). Ca2+ ion reinforces the mechanical strength and also reduces the critical gelator concentration of the native gel through coordination with the free -COO- group of the gelator. Therefore, this present system could be used as a visualized sensor of Ca2+ ion. Chapter 5: First Report of Naphthalenediimide Based Metallo(organo)gel In this chapter, we have demonstrated synthesis of a novel asymmetric bolaamphiphilic (Figure 8). NDI derivative is capable of self assemble into stable gel in EtOH. Detailed studies reveal the gelator molecule of 1 adopt a parallel alignment in the lamellae during self-aggregation as nanoscopic spherical assemblies. In addition, dried gel of 1 shows nematic liquid crystalline phase. Further, we synthesize a novel metal-ligand discrete complex 2 in a nearly quantitative yield by reacting equimolar amount of 1 and PdCl2(PhCN)2. Figure 8. NDI derivative, 1, and its discrete metal complex 2. Complex 2 has been found to yield stable gel in dichloromethane (DCM) or chloroform (CHCl3) through the formation of high aspect ratio fibers. ROESY NMR experiment of Complex 2 has been found to yield stable gel in dichloromethane (DCM) or chloroform (CHCl3) through the formation of high aspect ratio fibers. ROESY NMR experiment of

We report on an efficient assembly approach to a variety of electrostatically stabilized all-inorganic semiconductor nanocrystals (NCs) via their linking with appropriate ions into multibranched gel networks. These all-inorganic non-ordered 3D assemblies can combine strong interparticle coupling which facilitates charge transport between the NCs with their diverse morphology, composition, size, and functional capping ligands. Moreover, the resulting dry gels (aerogels) are highly porous monolithic structures, which preserve the quantum confinement of their building blocks. The inorganic semiconductor aerogel made of 4.5 nm CdSe colloidal NCs, capped with iodide ions and bridged with Cd2+ ions, exhibited a surface area as high as 146 m2/g.

Des membranes polymères catalytiques ont été préparées via la polymérisation photo-amorcée de monomères acryliques à la surface de membranes support MicroPES(r). Des nanoparticules de palladium (PdNP) avec diamètre moyen compris entre 4 et 10 nm sont ensuite synthétisés et immobilisées dans ces gels polymères greffés. Cette thèse se focalise sur le greffage d'un gel de polymère neutre : (2-hydroxyethyl acrylate) (PHEA), pour négliger les contributions ioniques du réseau polymère sur la synthèse in-situ des PdNP. La stabilisation de PdNP dans le gel de PHEA greffé est possible par des moyens stériques étant donné que la distance entre des chaînes de polymère réticules (entre 0.3 à 2.5 nm) est plus petite que le diamètre moyen de PdNP. Une approche à la fois théorique et expérimentale, sur la base des mecanismes de nucléation et de croissance, permet la conception de PdNP de taille spécifique. La performance catalytique des membranes a été évaluée avec une configuration en filtration traversée. Sur la réaction de couplage de Suzuki-Miyaura, des conversions et sélectivités de 100 % ont été obtenues pour des temps de séjour de 10 secondes avec des membranes planes. Les réactions d'hydrogénation de plusieurs composés aromatiques ont également été testées. Des taux de conversion élevés ont été obtenus en quelques secondes avec des membranes planes en filtration avec des solutions saturés d'H2. Des taux de conversion élevés sont obtenus en seulement quelques minutes avec des membranes fibres creuses catalytiques en mode contacteur permettant une importante intensification du procédé. / Catalytic polymeric membranes are prepared via photo-grafting polymerization of neutral acrylic monomers onto the surface of a MicroPES(r) membrane support. Palladium nanoparticles (PdNP) of mean diameter of 4-10 nm are synthetized and immobilized within the grafted polymer gels. The research is focused on grafting a neutral polymer gel: poly (2-hydroxyethyl acrylate) (PHEA), to avoid any ionic contribution of the polymer network on the in-situ synthesis of PdNP. The stabilization of PdNP within the grafted PHEA is achieved by steric means as the distance between polymeric crosslinked chains (ca. 0.3 to 2.5 nm) is smaller than the mean diameter of PdNP. Both theoretical and experimental approaches are presented on the PdNP synthesis as an approach to conceive PdNP of specific sizes using nucleation and growth theories. Catalytic performance of the membranes is evaluated in flow-through configuration. Catalytic tests are performed on Suzuki-Miyaura cross-coupling reactions. Full conversion and selectivity within 10 seconds of residence time using flat sheet membrane are obtained. Hydrogenation of several aromatic compounds are also tested and high conversions were achieved within seconds of residence time using flat sheet membranes in flow-through configuration with H2-saturated solutions and within minutes using catalytic hollow fibers in contactor mode.

In this thesis there was preparation optimized for agarose-gelatin hydrogels with addition of various concentrations of low-molecular and high-molecular hyaluronan and than there were examined viscoelastic properties of them by rheological oscilation tests and high-resolution ultrasonic spektrometry. By rheology were measured values of elastic and viscous modulus for selected amplitude of strain, oscilation frequencies and temperatures. In the second method there were recorded values of ultrasonic velocities of samples at temperature scanning from 85 to 25 °C and from 25 to 85 °C in HR-US 102, which were compared with ultrasonic velocities measured at the temperature 27,0±0,5 °C by gel-modul HR-EX-SSC.

This diploma thesis deals with humic acid gels and their ability to bind metallic ions on their surface. In the thesis, there was studied the adsorption of copper ions on the provided gels. The gels were prepared by dissolving the humic acid in sodium hydroxide or sodium tripolyphosphate and then precipitated with hydrochloric acid or metal chlorides. Adsorption was studied at different concentrations of the copper (II) chloride and measured on UV-VIS spectrophotometer. It was proved from measuring that gels made from sodium tripolyphosphate are adsorbing less copper ions than the ones prepared by sodium hydroxide. Also, the copper ions are bound with smaller force on gels prepared with polyphosphate. Gels precipitated with magnesium chloride adsorb much more than gels precipitated with acid, thus in the case of gels sequestered metal ions extracted higher.

Tomáš Křížek: Applications of Capillary Electrophoresis in Life Sciences (Dissertation thesis) ABSTRACT This thesis is focused on the applications of capillary electrophoresis in two important areas of life sciences, proteomics and enzyme assays. In the first part, Pluronic F-127 copolymer was studied as a sieving matrix for proteomic applications of capillary gel electrophoresis. The effect of thermoassociation of Pluronic F-127 on the separation selectivity was investigated and no difference in selectivity of the separation below, inside and above the thermoassociation temperature region was observed. The performance of Pluronic F-127 in capillary gel electrophoresis was compared with dextran as a commonly used sieving matrix. The results showed, that Pluronic F-127 offers superior performance for low-molecular-mass proteins because it provides higher separation power than dextran with significantly lower viscosity of the background electrolyte. The lower viscosity makes the polymer easier to replace after each analysis, which leads to remarkably higher repeatability of the experiments. On the other hand, dextran, due to its higher viscosity, was shown to be more convenient for separations of protein digests, where extremely high separation efficiency is required. The second part focuses on...

With respect to the principles of biomineralization, it is of interest to study the crystallization of calcium oxalates under various experimental conditions. Calcium oxalates play decisive roles as biominerals in plants and as pathological “urinary/kidney stones” in vertebrates. Calcium oxalate exists in three different hydration states; calcium oxalate monohydrate (COM, monoclinic, a = 6.290(1)Å, b = 14.583(1)Å, c = 10.116(1)Å, β = 109.46°, P21/c), calcium oxalate dihydrate (COD, tetragonal, a = b = 12.371(3)Å, c = 7.357(2)Å, α = β = γ = 90°, I4/m) and calcium oxalate trihydrate (COT, triclinic, a = 6.11(1)Å, b = 7.167(2)Å, c = 8.457(2)Å, α = 76.5(2)°, β = 70.35(2)°, γ = 70.62(2)°, P ). Monoclinic COM and tetragonal COD are the most common phyto-crystals and the main constituents of kidney and urinary stones. The occurrence of calcium oxalates in plants represents a useful biogenesis (protection against herbivores) unlike the devastating occurrence in renal tubules. Therefore, biomineralization can be physiological or pathological. A systematic investigation of the morphological evolution of calcium oxalates in the presence of organic components is essential for understanding the mechanism of “pathological biomineralization”. In order to understand the pathological biomineralization of uroliths, it is necessary grow calcium oxalates comparable in morphology under similar growth conditions. The formation of calcium oxalate stones within a gelatinous state of proteins, polysaccharides, lipids and other biomacromolecules under a flow of supersaturated urine supports the fact that an “organic” gel model can simulate the process of urinary stone formation under in vitro conditions. Furthermore, synthetic polymers with precisely known functions and solution behaviours are better choices to understand the interaction of acidic proteins with calcium oxalates. Therefore, as a first step to unravel the complex pathology of uro/nephro lithiasis, we started to examine the structure and morphology of calcium oxalates crystallized in the presence of organic additives such as the sodium salt of polyacrylic acid (PAA) as well as agar gel. The influence of initial calcium oxalate concentration, pH and concentration of the additives on the formation of hydration states of calcium oxalates have been investigated along with the stated general methods. Apart from the three hydrated forms, calcium oxalate exists also in the anhydrous form (COA). Although three modifications of COA (α, β and γ) are reported in the literatures, the crystal structures and phase transformations were controversially discussed. We have been able to reveal the crystal structure of the β-modification of the anhydrous calcium oxalate by a combination of atomistic simulations and Rietveld refinements on the basis of powder X-ray diffraction pattern. β-COA belongs to the monoclinic system with unit cell parameters, a = 6.1644(3)Å, b = 7.3623(2)Å, c = 9.5371(5)Å, β = 90.24(2)°, P2/m (No. 10). The dehydration of COM was mimicked in silico to receive an initial model of the crystal structure of anhydrous calcium oxalate. This general approach may also be accessible for other decomposition processes ending up with crystalline powders of unknown crystal structure. No evidence for transformations from or to the α- or γ- modifications was found during our investigations. The growth pattern of COD crystals precipitated from aqueous solutions in the presence of PAA is clearly dependent on the concentration of PAA. By increasing the concentration of PAA, the shape of COD has been found to change from tetragonal bi-pyramids with dominant (101) pyramidal faces to tetragonal prisms with dominant (100) prism faces and finally to dumbbells. At still higher PAA concentrations, the morphology is reverted back to rod-like tetragonal prisms. Apart from these experiments, the interaction of PAA with (100) and (101) crystal faces of COD was explored with the aid of atomistic simulations. The simulation confirmed that during the development of the aggregates, strong interactions of PAA with the (100) faces take over control of morphologies. Our investigations show that the inner architecture of all the morphological varieties of COD was found to be dominated by an inner “core” consisting of thin elongated crystallites together with incorporated PAA and an outer “shell” formed as a consequence of secondary nucleation processes. We propose that for all types of COD aggregates, relative proportion of calcium oxalate and PAA dictates the shape and formation of nanometer sized crystallites which then aggregate and align to form the core. Such cores enriched with PAA may act as the sites for secondary nucleation events of calcium oxalate crystallites which then cover the core like a shell. In vitro experimental models for the growth of calcium oxalates can give valuable information on the growth and aggregation of urinary stones. Therefore, the “double diffusion technique” in agar gel matrix has been used for the biomimetic growth of calcium oxalate (COM) stones. A great variety of morphological forms of COM are produced in agar gel matrices (2 wt.-% agar gel of pH 8.5) ranging from platy crystallites to dumbbells and spherulites. The COM dumbbells and spherulites are assumed to be formed by the aggregation of smaller crystallites as a consequence of increased supersaturation inside the gel. Moreover, an increase of the pH value of the agar gel has been found to suppress the growth of COM and favours the growth of COD. The morphology of COD crystals grown in 2 wt.-% agar gel of pH 11.5 includes tetragonal prisms and dumbbells. The system calcium oxalate/ PAA/ H2O is a suitable model system for the investigation of principles of biomineral growth (shape development) in general. Our results demonstrate that the double diffusion technique in agar gel is a convenient route to grow calcium oxalate aggregates showing close resemblance to biogenic calculi and to study their ontogeny.

Tesis por compendio / [ES] El objetivo de esta tesis doctoral ha sido el diseño y caracterización estructural de estructuras tipo gel basadas de polisacáridos extraídos de biomasa acuática con interés para aplicaciones relacionadas con la alimentación. Las propiedades de los polisacáridos extraídos de algas y plantas acuáticas son adecuadas para producir diferentes estructuras tipo gel basadas en la formación de redes reticuladas, como hidrogeles, aerogeles y emulsion-gels. En la primera parte de esta tesis se investigaron los diferentes mecanismos de gelificación de polisacáridos sulfatados, así como los parámetros que afectan a la estructura y las propiedades funcionales de los hidrogeles obtenidos. En base a los resultados, se evaluó la potencial aplicación de los hidrogeles y aerogeles de agar y k-carragenato para encapsular una proteína alimentaria modelo como la caseína, explorando así el efecto protector contra la hidrólisis enzimática tras digestiones gastrointestinales simuladas. En la segunda parte de esta tesis, se desarrollaron estructuras de aerogeles mediante la valorización de una fuente de biomasa residual infrautilizada, como es el Arundo donax. Con esta biomasa se generaron fracciones celulósicas con diferentes grados de purificación y extractos bioactivos solubles en agua, que posteriormente se utilizaron para producir aerogeles bioactivos híbridos. La estructura altamente porosa y la elevada capacidad de sorción de los aerogeles los convierten en excelentes candidatos para la sustitución de las almohadillas absorbentes para mantener la calidad de los productos cárnicos envasados. Los emulsion-gels son reconocidos por su gran potencial como ingredientes funcionales en la industria alimentaria como modificadores de textura y como sustitutos de grasas sólidas. Además, pueden utilizarse como vehículo para la liberación controlada de compuestos bioactivos liposolubles. Así, en la última parte de esta tesis, se investigó la naturaleza de las interacciones entre los componentes en las formulaciones de emulsion-gels basadas en polisacáridos y se relacionó con su estructura y comportamiento mecánico y reológico. Después de estudiar el mecanismo de gelificación de los emulsion-gels de carragenato, estos sistemas se adaptaron y utilizaron para dos diferentes aplicaciones relevantes para los sectores de alimentación y biomedicina. En primer lugar, se produjeron y evaluaron estructuras gelificadas a partir de emulsion-gels de agar y k-carragenato y aerogeles cargados de aceite como encapsulantes de un bioactivo lipofílico como la curcumina. Los resultados mostraron que el tipo de polisacárido y el estado físico de las redes del gel tenían un impacto en la estructura de los productos de la digestión. Por otro lado, se evaluó el potencial de los emulsion-gels basados en polisacáridos sulfatados (k-carragenato y agar) para la producción de un material capaz de simular tejido graso. Los resultados evidencian que los emulsions-gels de agar son adecuadas para producir materiales que simulan las propiedades dieléctricas para imitar tejidos de bajo y alto contenido en agua. / [CA] L'objectiu d'aquesta tesi doctoral ha sigut, el disseny i caracterització estructural d'estructures tipus gel, basades en polisacàrids extrets de biomassa aquàtica amb interès per a aplicacions relacionades amb l'alimentació. Les propietats dels polisacàrids extrets d'algues i plantes aquàtiques, són adequades per a produir diferents estructures tipus gel basades en la formació de xarxes reticulades, com a hidrogels, aerogels i emulsió-gels. En la primera part d'aquesta tesi es van investigar els diferents mecanismes de gelificació de polisacàrids sulfatats, així com els paràmetres que afecten l'estructura i les propietats funcionals dels hidrogels obtinguts. Sobre la base dels resultats, es va avaluar la potencial aplicació dels hidrogels i aerogels d'agar i k-carraguenina per a encapsular una proteïna alimentària model com la caseïna, explorant així l'efecte protector contra la hidròlisi enzimàtica després de digestions gastrointestinals simulades. A la segona part d'aquesta tesi, es van desenvolupar estructures d' aerogels mitjançant la valorització d'una font de biomassa residual infrautilitzada, com és el Arundo donax. Amb aquesta biomassa es van generar fraccions cel·lulòsiques amb diferents graus de purificació i extractes bioactius solubles en aigua, que posteriorment es van utilitzar per a produir aerogels bioactius híbrids. L'estructura altament porosa i l'elevada capacitat de sorció dels aerogels els converteixen en excel·lents candidats per a la substitució dels coixinets absorbents per a mantenir la qualitat dels productes carnis envasats. Els emulsió-gels són reconeguts pel seu gran potencial com a ingredients funcionals en la indústria alimentària com a modificadors de textura i com a substituts de greixos sòlids. A més, poden utilitzar-se com a vehicle per a l'alliberament controlat de compostos bioactius liposolubles. Així, a l'última part d'aquesta tesi, es va investigar la naturalesa de les interaccions entre els components dins les formulacions d' emulsió-gels basades en polisacàrids i es va relacionar amb la seua estructura i comportament mecànic i reològic. Després d'estudiar el mecanisme de gelificació dels emulsió-gels de carraguenina, aquests sistemes es van adaptar i es van utilitzar per a dues aplicacions diferents, rellevants per als sectors de l' alimentació i la biomedicina. En primer lloc, es van produir i van avaluar estructures gelificades a partir de emulsió-gels d'agar i k-carraguenina i aerogels carregats d'oli com a encapsulants d'un bioactiu lipofílic com la curcumina. Els resultats van mostrar que el tipus de polisacàrid i l'estat físic de les xarxes del gel tenien un impacte en l'estructura dels productes de la digestió. D'altra banda, es va avaluar el potencial dels emulsió-gels basats en polisacàrids sulfatats (k-carraguenina i agar) per a la producció d'un material capaç de simular teixit gras. Els resultats evidencien que els emulsió-gels d'agar són adequats per a produir materials que simulen les propietats dielèctriques podentimitar teixits de baix i alt contingut en aigua. / [EN] The aim of this doctoral thesis was to design and characterize the structure of gel-like structures based on polysaccharides extracted from aquatic biomass, with interest for food-related applications. The properties of polysaccharides extracted from seaweeds and aquatic plants make them suitable to produce a range of gel-like structures based on the formation of interconnected networks, such as hydrogels, aerogels and emulsion-gels. In the first part of this thesis, the different gelation mechanism of sulphated polysaccharides and the parameters affecting the structure and functional properties of the obtained hydrogels were investigated. Based on the results, the potential application of agar and k-carrageenan hydrogels and aerogels to encapsulate a model food protein such as casein was evaluated, thus exploring the protective effect against the enzymatic hydrolysis upon simulated gastrointestinal digestions. In the second part of this thesis, aerogel structures were developed by valorising an underutilized waste biomass source such as Arundo donax. This biomass was used to generate cellulosic fractions with different purification degrees and water-soluble bioactive extracts, which were subsequently used to produce hybrid bioactive aerogels. The highly porous structure and high sorption capacity of aerogels make them excellent candidates for the replacement of absorbent pads to maintain the quality of packaged meat products. Emulsion-gels are recognized for their great potential as functional ingredients in the food industry to modify texture and for solid fat replacement. Moreover, they can be used as a delivery vehicle for the controlled release of fat-soluble bioactive compounds. Thus, in the last part, the nature of interactions between the components in polysaccharide-based emulsion-gel formulations was investigated and related to their structure and mechanical and rheological behavior. After studying the gelation mechanism of carrageenan emulsion-gels, these systems were adapted and used for two different applications relevant to the food and biomedicine sectors. Firstly, oil-filled gel-like structures from agar and k-carrageenan emulsion-gels and oil-filled aerogels were produced and evaluated as carriers of a lipophilic bioactive such as curcumin. The results showed that the polysaccharide type and the physical state of the gel network had an impact on the structure of the digestion products. On the other hand, the potential of emulsion-gels based on sulphated polysaccharides (k-carrageenan and agar) for the production of tissue mimicking phantoms was evaluated. The results evidence that the agar emulsion-gels are suitable to produce materials simulating the dielectric properties to mimic low- and high-water content tissues. / Synchrotron experiments were performed at NCD beamline at ALBA Synchrotron with the collaboration of ALBA staff (2018022638 project). This work was financially supported by the grant RTI2018-094268-B-C22 (MCIU/AEI/FEDER, UE). Part of this work was supported by the COST Action ES1408 European network for algal-bioproducts (EUALGAE). Cynthia Fontes-Candia is recipient of a pre-doctoral grant from CONACYT (MEX/Ref. 306680). The projects RTI2018-094268-B-C22 and RTI2018-094408-J-I00 were funded by MCIN/AEI/10.13039/501100011033 and by “ERDF A way of making Europe”. This work has also received financial support from project PID2019-107663RB-I00 from the Spanish Ministry of Science and Innovation (MICINN). Cynthia Fontes-Candia is recipient of a pre-doctoral grant from CONACYT (MEX/Ref. 306680). Marta Martinez-Sanz is recipient of a Juan de la Cierva (IJCI-2015-23389) contract from the Spanish Ministry of Economy, Industry and Competitiveness. / Fontes Candia, C. (2022). Development and Characterization of Gel-Like Structures from Aquatic Biomass for Food Applications [Tesis doctoral]. Universitat Politècnica de València. https://doi.org/10.4995/Thesis/10251/181564 / TESIS / Compendio