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Hairy roots are a syndrome of the plant pathogen Agrobacterium rhizogenes, which induces the aggressive growth of roots in the plants it infects. Hairy roots are shown to have increased production of secondary metabolites when compared to roots that are not transformed, especially when they are exposed to plant signaling hormones called elicitors. Two popular elicitors are Methyl Jasmonate (MeJA) and Salicylic Acid (SA), which are also potent plant signaling compounds involved in plant defense and immunity. Many studies have reported on the secondary metabolites of hairy roots and their production of metabolites after exposure to elicitors. However, there is a gap in current knowledge of how hairy roots and non-transformed roots of Helianthus annuus (the common sunflower) compare in their secondary metabolite profiles, which include the volatile terpenoids they produce. This experiment used solid-phase microextraction gas chromatography-mass spectrometry (SPME GC-MS) to compare the volatile terpenoid profiles of hairy roots and non-transformed roots of H. annuus after their exposure to 0.2 mM MeJA and MeSA, the methyl ester of SA. The experiment identified several differences in the production of volatile compounds across elicitor treatments and time points yet hairy roots largely maintained the properties of their native counterparts. This project provides information on the secondary metabolism and volatile terpenoid profiles of hairy roots and explores the biotechnological applications of such insights.

Die Pflanzenbiotechnologie ermöglicht die nachhaltige Gewinnung pflanzlicher Wertstoffe mittels innovativer biotechnologischer Methoden. Bisher mangelt es auf diesem Gebiet jedoch an Grundlagenwissen und aussagekräftigen Studien, z. B. zur Anwendung biotechnologischer Standardverfahren beim Respirationsmonitoring. Im Rahmen der vorliegenden Arbeit werden grundlegende Untersuchungen zur Erzeugung (Induktion) pflanzlicher in-vitro-Kulturen und zu geeigneten Kultivierungssystemen sowie Prozessüberwachungsstrategien vorgestellt und diskutiert. Als Modellsystem dient die Einjährige Sonnenblume Helianthus annuus. Die Induktion pflanzlicher Zellkulturen (Kallus und Suspensionen) mit photomixotrophem Stoffwechsel wurde unter unterschiedlichen Bedingungen untersucht und geeignete Induktionsparameter ermittelt. Sowohl pflanzliche Gewebekulturen (Hairy roots) als auch die erzeugten photomixotrophen und heterotrophe Suspensionen konnten in verschiedenen Reaktorsystemen erfolgreich kultiviert und die Produktbildung nachgewiesen werden. Protokolle zu Induktion sowie Erhaltung von Zell- und Gewebekulturen von H. annuus wurden etabliert. Ein modernes Prozessüberwachungssystem für Schüttelkolben, das RAMOS® (Respiration Activity Monitoring System®) wurde erstmals umfassend für Untersuchungen des Wachstumsverhaltens und zum Screening pflanzlicher Zell- und Gewebekulturen eingesetzt. Dabei wurde die Problematik der Verdunstung (Evaporation) aus den Kulturgefäßen als signifikant bei den langen Kultivierungen von pflanzlichen in-vitro-Kulturen diagnostiziert und ein Modell zur Korrektur der Atmungstransferraten entwickelt. Erstmalig in der Pflanzenbiotechnologie kam das RAMOS® für Studien mit Zell- und Gewebekulturen von H. annuus im Speziellen sowie für Untersuchungen von Hairy roots im Allgemeinen zum Einsatz. Mit Hilfe der vorliegenden Arbeit werden relevante Kriterien zur Anwendung des innovativen Messsystems RAMOS® im Rahmen pflanzenbiotechnologischer Untersuchungen vorgestellt. Es wird ein Überblick über geeignete Kultivierungssysteme und zu publizierten Modellierungsstrategien für Applikationen in der Pflanzenbiotechnologie gegeben. Ein Literaturüberblick zu publizierten Modellierungsstrategien mit pflanzenbiotechnologischem Bezug vervollständigt die Arbeit. / Plant biotechnology enables a sustainable production of valuable plant resources using innovative biotechnological methods. However, a comprehensive knowledge base as well as significant studies, e. g. concerning the application of biotechnological standard procedures of respiration monitoring, are missing so far. In this work, basic investigations regarding the induction of plant in vitro cultures and appropriate cultivation systems as well as process monitoring strategies will be introduced and discussed. The annual sunflower Helianthus annuus serves as biological model system. The induction of plant cell cultures (callus and suspension) with photomixotroph metabolism was investigated at different conditions and appropriate induction parameter were determined. Both, plant tissues (Hairy roots) and induced photomixotroph as well as heterotrophic suspensions were cultivated successfully in various reactor systems. The production of desired metabolites was proven. Protocols concerning induction respectively maintenance of cell and tissue cultures of H. annuus have been established. For extensive investigations of growth behavior and for screening of plant cell and tissue cultures, a modern process monitoring tool for shake flasks, the RAMOS® (Respiration Activity Monitoring System®), was used for the first time. Thereby, the problem of evaporation off the culture vessels was identified as significant for time-intensive cultivations of plant in vitro cultures. A model for the correction of respiration transfer rates has been developed. For the first time in plant biotechnology, the RAMOS® has been applied for studies with H. annuus in special, and for studying the growth and respiration behavior of Hairy roots in general. With the help of the present work, relevant criteria concerning the application of the innovative measuring system RAMOS® for plant biotechnological investigations will be given. Furthermore, a survey over appropriate cultivation systems and published modelling strategies in plant biotechnology are introduced. A literature survey concerning model strategies regarding plant biotechnology completes this work.

Die Pflanzenbiotechnologie ermöglicht die nachhaltige Gewinnung pflanzlicher Wertstoffe mittels innovativer biotechnologischer Methoden. Bisher mangelt es auf diesem Gebiet jedoch an Grundlagenwissen und aussagekräftigen Studien, z. B. zur Anwendung biotechnologischer Standardverfahren beim Respirationsmonitoring. Im Rahmen der vorliegenden Arbeit werden grundlegende Untersuchungen zur Erzeugung (Induktion) pflanzlicher in-vitro-Kulturen und zu geeigneten Kultivierungssystemen sowie Prozessüberwachungsstrategien vorgestellt und diskutiert. Als Modellsystem dient die Einjährige Sonnenblume Helianthus annuus. Die Induktion pflanzlicher Zellkulturen (Kallus und Suspensionen) mit photomixotrophem Stoffwechsel wurde unter unterschiedlichen Bedingungen untersucht und geeignete Induktionsparameter ermittelt. Sowohl pflanzliche Gewebekulturen (Hairy roots) als auch die erzeugten photomixotrophen und heterotrophe Suspensionen konnten in verschiedenen Reaktorsystemen erfolgreich kultiviert und die Produktbildung nachgewiesen werden. Protokolle zu Induktion sowie Erhaltung von Zell- und Gewebekulturen von H. annuus wurden etabliert. Ein modernes Prozessüberwachungssystem für Schüttelkolben, das RAMOS® (Respiration Activity Monitoring System®) wurde erstmals umfassend für Untersuchungen des Wachstumsverhaltens und zum Screening pflanzlicher Zell- und Gewebekulturen eingesetzt. Dabei wurde die Problematik der Verdunstung (Evaporation) aus den Kulturgefäßen als signifikant bei den langen Kultivierungen von pflanzlichen in-vitro-Kulturen diagnostiziert und ein Modell zur Korrektur der Atmungstransferraten entwickelt. Erstmalig in der Pflanzenbiotechnologie kam das RAMOS® für Studien mit Zell- und Gewebekulturen von H. annuus im Speziellen sowie für Untersuchungen von Hairy roots im Allgemeinen zum Einsatz. Mit Hilfe der vorliegenden Arbeit werden relevante Kriterien zur Anwendung des innovativen Messsystems RAMOS® im Rahmen pflanzenbiotechnologischer Untersuchungen vorgestellt. Es wird ein Überblick über geeignete Kultivierungssysteme und zu publizierten Modellierungsstrategien für Applikationen in der Pflanzenbiotechnologie gegeben. Ein Literaturüberblick zu publizierten Modellierungsstrategien mit pflanzenbiotechnologischem Bezug vervollständigt die Arbeit. / Plant biotechnology enables a sustainable production of valuable plant resources using innovative biotechnological methods. However, a comprehensive knowledge base as well as significant studies, e. g. concerning the application of biotechnological standard procedures of respiration monitoring, are missing so far. In this work, basic investigations regarding the induction of plant in vitro cultures and appropriate cultivation systems as well as process monitoring strategies will be introduced and discussed. The annual sunflower Helianthus annuus serves as biological model system. The induction of plant cell cultures (callus and suspension) with photomixotroph metabolism was investigated at different conditions and appropriate induction parameter were determined. Both, plant tissues (Hairy roots) and induced photomixotroph as well as heterotrophic suspensions were cultivated successfully in various reactor systems. The production of desired metabolites was proven. Protocols concerning induction respectively maintenance of cell and tissue cultures of H. annuus have been established. For extensive investigations of growth behavior and for screening of plant cell and tissue cultures, a modern process monitoring tool for shake flasks, the RAMOS® (Respiration Activity Monitoring System®), was used for the first time. Thereby, the problem of evaporation off the culture vessels was identified as significant for time-intensive cultivations of plant in vitro cultures. A model for the correction of respiration transfer rates has been developed. For the first time in plant biotechnology, the RAMOS® has been applied for studies with H. annuus in special, and for studying the growth and respiration behavior of Hairy roots in general. With the help of the present work, relevant criteria concerning the application of the innovative measuring system RAMOS® for plant biotechnological investigations will be given. Furthermore, a survey over appropriate cultivation systems and published modelling strategies in plant biotechnology are introduced. A literature survey concerning model strategies regarding plant biotechnology completes this work.

Arsenic is an element which belongs to metaloids. Contamination with arsenic is a problem all over the world. Basically it is a part of Earth's crust, but with anthropogenic activities it could overspread into soil, water and air in large scale a thus it could mean health hazard. Fytoremediation is kind of environment decontamination, which is quite effective and cheap as well. Publications about arsenic and its influence on plant metabolism are mostly focused on important crop plants like rice. Rice is mostly used for experiments and questions on anatomical and morphological changes are widely being solved by these experiments, but it has only insignificant relevance for fytoremediation. There are only few publications about arsenic influence on carbohydrate metabolism, thus little is known about this problem. That is why I have decided to study this topic more deeply and get more information about carbohydrate metabolic changes under influence of arsenic and partly also under influence of mercury, because information about influence of mercury are completely lacking. My experimental material includes tobacco plant, tobacco tissue cultures and horseradish hairy roots cultures. Accumulation of starch and soluble carbohydrate spectrum and content was determined by HPLC. Furthermore arsenic influence...

In most plant species artificial polyploidy generally enhances the vigor of determinate plant parts and may be favorable where vegetative organs and biomass constitute the economic product. Furthermore, artificial polyploidy has been considered a method of increasing production potential of plants secondary metabolites. However, despite considerable research on polyploid plants, very few cases of polyploid medicinal plants have been reported. Artemisia annua L. synthesizes artemisinin, an antimalarial sesquiterpene lactone. Artemisinin can be synthesized, but it is costly compared to the naturally derived product. Hairy root cultures of Artemisia annua L. (clone YUT16) show rapid growth and produce artemisinin. This culture offers a good model system for studying artemisinin production. Others have shown that tetraploid Artemisia annua L. plants produce more artemisinin/mg DW than diploids. These yields were offset, however, by decreases in biomass productivity. Little is known about how polyploidy may affect growth production of hairy roots. Using colchicine, we have produced four stable tetraploid clones of Artemisia annua L. from YUT16 hairy root clone. Compared to the diploid clone, these tetraploid clones showed major differences in growth and development. Nevertheless, artemisinin yields of these tetraploid clones were 2-5 times higher than the diploid and their production seemed to be by the age of the inoculum. This work will prove useful in furthering our understanding of the effects of artificial polyploidy on the growth and secondary metabolite production of hairy roots.

Ce travail porte sur la mise au point et l’étude d’un nouveau système de culture in vitro permettant une production efficace de dérivés de t-resvératrol. Pour cela, des lignées de racines transformées de Vitis vinifera L. ont été établies, stabilisées et criblées. Le faible taux de croissance a été amélioré par criblage de différents milieux de cultures et différentes concentrations en saccharose, montrant une préférence pour le milieu ½ SH avec 2% (p/v) de saccharose. Les cinétiques de croissance et de production de stilbènes ont ensuite été évaluées dans ces conditions. Nous avons mis en évidence une production basale de stilbènes par les racines, bien que celles-ci soient aussi fortement inductibles par des traitements d’élicitation par du méthyl jasmonate et des cyclodextrines. Dans ces conditions, les racines transformées de vigne ont montré une forte capacité de production et d’excrétion de différents stilbènes. Un profilage phytochimique des racines et de leur milieu de culture a été réalisé par CPC-RMN et LC-MS pour illustrer cette diversité. En parallèle des études sur un modèle simplifié, les cultures de cellules en suspension ont été réalisées pour rechercher des transporteurs candidats pour l’excrétion active du t-resvératrol vers son lieu d’action. Une approche de protéomique globale de la membrane plasmique par iTRAQ a permis de cibler des candidats de type ABC transporteurs, qui ont ensuite été caractérisés par des approches d’étude de l’expression de leurs transcrits. Ensemble, ces résultats soutiennent l’intérêt de cet outil pour l’étude du métabolisme ainsi que pour la bioproduction de stilbènes. / This work aims at the setting up and the study of a new in vitro culture for a cost-effective production of highly pure resveratrol derivatives. To answer that need, hairy root lines of Vitis vinifera L. were established, stabilized and screened. Their low growth rate was improved by testing various culture media and different sucrose concentrations. The best growth rate was obtained with ½ SH medium with 2% (w/v) sucrose. The growth and stilbene production kinetics were assessed in these conditions. A constitutive production of stilbenes was observed in roots, though they showed a strong response to eliciting treatments such as methyl jasmonate and cyclodextrines. In these conditions, the hairy roots yielded high stilbene production in terms of concentrations as well as diversity. The diversity of the stilbenes obtained has been described by biochemical profiling of both root and their culture medium extracts using CPC-NMR and LC-MS. Together with the study of hairy roots, we used cell suspensions cultures as a simplified model to study the excretion of t-resveratrol. Candidate transporters have been screened for using a global plasma membrane proteomic approach based of iTRAQ. ABC G transporters were pointed out as promising candidates and were further characterized by studying their gene expression. Together, these results support the interest of grapevine hairy root cultures for the study of stilbenes metabolism and their bioproduction.

No description available.

Notre objectif était de mieux comprendre la régulation de la biosynthèse des parois secondaires lors de la formation du bois chez l'Eucalyptus, le feuillu le plus planté au monde et le deuxième dont le génome est séquencé. Nous avons caractérisé trois facteurs de transcription de la famille MYB-R2R3 et montré que EgMYB137 était un nouveau régulateur de la biosynthèse des parois secondaires. Nous avons aussi démontré que l'activité transcriptionnelle de EgMYB1, un répresseur de la biosynthèse des lignines, était régulée par une interaction protéine-protéine impliquant une histone linker (EgH1.3). Enfin, nous avons mis au point une méthode de transformation homologue chez l'Eucalyptus via A. rhizogenes. Les " hairy roots " transgéniques sont adaptées à la caractérisation fonctionnelle de gènes reliés à la formation du xylème. Nos résultats ont permis de découvrir de nouveaux acteurs impliqués dans la régulation des parois secondaires, mettant en lumière la complexité de ce processus mais aussi offrant de nouvelles perspectives pour l'amélioration du bois pour des applications industrielles comme la production de bioéthanol de deuxième génération. / Our objective was to better understand the regulation of the biosynthesis of the lignified secondary cell walls during wood formation in Eucalyptus, the most planted hardwood tree, and the second whose genome has been sequenced. We functionally characterized three Eucalyptus transcription factors of the R2R3-MYB family and identified EgMYB137 as a new regulator of secondary cell wall deposition. We also showed that the transcriptional activity of EgMYB1, a repressor of lignin biosynthesis was modulated by protein-protein interactions involving a linker histone (EgH1.3). Finally, we set up a homologous transformation system for Eucalyptus using Agrobacterium rhizogenes. The transgenic hairy roots are suitable for high throughput functional characterization of cell wall-related genes. Our findings not only allowed getting new insights into the complexity of the network regulating secondary cell walls but also open new avenues to improve wood quality for industrial applications such as second-generation bioethanol.

In dieser Arbeit wird die Eignung eines Haarwurzelsystems (HR) aus transgenen Sonnenblumen-hairy roots zur biotechnologischen Produktion von α-Tocopherol untersucht. Es wurden hairy roots mit und ohne Transgene erzeugt. Transgene HR exprimieren Tocopherolbiosynthesegene aus Arabidopsis thaliana. Die HR wurden unterschiedlichen Stressoren unterworfen, um die α-Tocopherolproduktion binnen eines Zeitraums zu überprüfen. Stressoren waren verringerte Kohlenstoffquelle, Beleuchtung und der Zusatz von Zytokininen. Die Produktionsleistung des Systems ist schlussendlich ungenügend zur kostengünstigen Produktion von α-Tocopherol.