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The Gopher Tortoise is an important component of a number of upland ecological communities throughout the southeastern U.S., but populations have experienced significant declines over the past century, largely in conjunction with the loss of longleaf pine (Pinus palustris) forests. Military installations have preserved large tracts of longleaf pine, often while implementing prescribed fires that mimic natural lightning-ignited fires (frequent low intensity fire is a necessary component of longleaf pine communities), which in turn has provided refuges for many imperiled longleaf associates, including the Gopher Tortoise. Eglin Air Force Base in the western Florida panhandle presents a unique situation in which large tracts of longleaf pine sandhill (suitable Gopher Tortoise habitat) are available, but tortoise sub-populations on base are small, and many tortoises currently inhabit treeless military testing and training ranges (test ranges) rather than typical forested sandhill. My objectives were therefore to identify factors that may have been influencing use of test ranges as habitat by gopher tortoises and that might explain observed differences in burrow densities among sites. In Chapter 1, I compared vegetation structure, composition, and burrow site selection among sites and between forested and test range vegetation types. I also attempted to identify relationships between vegetation characteristics and variation in burrow densities (a proxy for abundance within a given area) among sites. In Chapter 2, I distributed a questionnaire to other military installations throughout the southeast to identify common management techniques used to maintain testing and training areas at other tortoise-occupied military installations, as these techniques likely affect their suitability as tortoise habitat. In Chapter 3, I compared surface activity patterns of juvenile Gopher Tortoises between forested and test range vegetation types, as surface activity in these vulnerable, but important size classes may affect survival rates. I found that test ranges generally had greater herbaceous vegetation cover than forested sites (greater forage availability), were highly species diverse in terms of groundcover plants, and had herbaceous communities that shared a number of common sandhill plant species with forested sites, but also were unique in a number of ways. I also found that adult tortoises (burrow site selection) and juvenile tortoises (surface activity) may have exhibited different behaviors in novel test range vegetation types compared to individuals inhabiting more natural longleaf pine sandhill on base. However, I did not find strong evidence that current vegetation structure or composition was related to observed differences in burrow densities among sites and that other factors might have played a greater role in structuring Eglin's remnant tortoise sub-populations. / Master of Science / The Gopher Tortoise is an important component of a number of upland ecological communities throughout the southeastern U.S., but populations have experienced significant declines over the past century, largely in conjunction with the loss of longleaf pine (Pinus palustris) forests. Military installations have preserved large tracts of longleaf pine, often while implementing prescribed fires that mimic natural lightning-ignited fires (frequent low intensity fire is a necessary component of longleaf pine communities), which in turn has provided refuges for many imperiled longleaf associates, including the Gopher Tortoise. Eglin Air Force Base in the western Florida panhandle presents a unique situation in which large tracts of longleaf pine sandhill (suitable Gopher Tortoise habitat) are available, but tortoise sub-populations on base are small, and many tortoises currently inhabit treeless military testing and training ranges (test ranges) rather than typical forested sandhill. My objectives were therefore to identify factors that may have been influencing use of test ranges as habitat by gopher tortoises and that might explain observed differences in burrow densities among sites. In Chapter 1, I compared vegetation structure, composition, and burrow site selection among sites and between forested and test range vegetation types. I also attempted to identify relationships between vegetation characteristics and variation in burrow densities (a proxy for abundance within a given area) among sites. In Chapter 2, I distributed a questionnaire to other military installations throughout the southeast to identify common management techniques used to maintain testing and training areas at other tortoise-occupied military installations, as these techniques likely affect their suitability as tortoise habitat. In Chapter 3, I compared surface activity patterns of juvenile Gopher Tortoises between forested and test range vegetation types, as surface activity in these vulnerable, but important size classes may affect survival rates. I found that test ranges generally had greater herbaceous vegetation cover than forested sites (greater forage availability), were highly species diverse in terms of groundcover plants, and had herbaceous communities that shared a number of common sandhill plant species with forested sites, but also were unique in a number of ways. I also found that adult tortoises (burrow site selection) and juvenile tortoises (surface activity) may have exhibited different behaviors in novel test range vegetation types compared to individuals inhabiting more natural longleaf pine sandhill on base. However, I did not find strong evidence that current vegetation structure or composition was related to observed differences in burrow densities among sites and that other factors might have played a greater role in structuring Eglin’s remnant tortoise sub-populations.

Perennial growers overwintering plant stock require information to assist in deciding which containerized plants are most likely to successfully overwinter. Three studies on container-grown herbaceous perennials were conducted to examine the influence of plant age, soil moisture, and temperature cycling date on cold hardiness. In January, plants were exposed to controlled freezing temperatures of -2, -5, -8, -11, and -14C and then returned to a 3-5C greenhouse. In June, plants were assessed using a visual rating scale of 1-5 (1 = dead, 3-5 = increasing salable quality, varying by cultivar) and dry weights of new growth were determined. Controlled freezing in November and March were also included in the third study. In the first study, two ages of plants were exposed to controlled freezing temperatures in January. For Geranium x cantabrigiense 'Karmina', age had no effect on either rating or dry weight in one study year. In two Sedum 'Matrona' study years, age had no effect on dry weight but ratings were higher for older plants than younger plants in the first year and higher for younger plants than older plants in the second year. In two Leucanthemum x superbum 'Becky' study years, age had an effect on both rating and dry weight which were both generally higher for younger plants than older plants. In the second study, plants were maintained in pots at two different soil moisture levels prior to exposure to controlled freezing temperatures in January. Coreopsis 'Tequila Sunrise' and Carex morrowii 'Ice Dance' showed no effect on either rating or dry weight from soil moisture level. Soil moisture level had no effect on dry weight but ratings were higher for Geranium x cantabrigiense 'Cambridge' “wet” plants and for Heuchera 'Plum Pudding' “dry” plants. Carex laxiculmus 'Hobb' (Bunny Blue™) soil moisture level had an effect where dry weight was higher for “dry” plants. Means at were of salable quality for Geranium and Heuchera at all temperatures and Carex laxiculmus at temperatures above -11C. The effects of soil moisture level on Carex oshimensis were inconclusive. In the third study, during November, January, and March, plants were subjected to temperature cycling treatments prior to exposure to controlled freezing temperatures. Geranium x cantabrigiense 'Cambridge' were more tolerant of both temperature cycling and freezing temperatures in January and an increased number of cycles in November had an advantageous effect. Sedum 'Matrona' were more tolerant of temperature cycling and freezing temperatures in January and an increased number of cycles in March had an advantageous effect. Leucanthemum x superbum 'Becky' were more tolerant of temperature cycling in January in the second year of the study and an increased number of cycles in November had an advantageous effect in the first year and in all months in the second year. Overwintering younger container-grown plants is likely to result in more growth and higher quality following exposure to freezing temperatures. Effects of soil moisture level on overwintering container-grown plant growth and quality are cultivar-specific and a general effect could not be established in these studies. Overwintering container-grown plants are likely to be hardier in January and slight temperature cycles prior to exposure to freezing temperatures generally increase hardiness.

Abstract Managing protected areas requires consideration of broad scale social, ecological and in some cases, political factors. Additionally, the impacts of hyperabundant species is often a concern in protected areas as increases in breeding and foraging pressures can alter habitats dramatically. The influences of hyberabundant nesting colonies of waterbird species are well documented. Many studies indicate that waterbird species can influence canopy species as especially on the shoreline of islands, where the most abundant nesting pressures occur. On Lake Erie, Phalacrocorax auritus populations have increased dramatically from a low of 87 nests in 1979 to 16,050 nests in 2007. However, most studies have failed to address the influences that mature tree death may have on the ground layer ecosystem, including increased litter depth, herbaceous species composition and abundance and seed bank composition and viability. Consequently this study sought to quantify the nesting colonies’ influence on coarse woody litter and how nest densities and litter depth influence the herbaceous layer, the seed bank composition and viability across the extent of three Lake Erie islands. My study was designed to quantify the nesting colonies’ influence on these variables across the extent of each island, rather than just the perimeters where the majority of cormorant nests and visible damage exists. I collected my data in the summer of 2008 on East Sister Island, Middle Island and West Sister Island, using plotless-point quarter method, herbaceous layer surveys (incorporating data collected by Parks Canada and Ontario Parks in 2004 and 2007), cormorant nest counts, soil seed bank cores, and litter depth measurements. To test whether there are specific impacts of cormorant nests relegated to the island perimeters versus the rest of the island, an available subset of data on East Sister Island and Middle Island were used. These were expressed as vegetation ‘damage indices’ as classified by Parks Canada and Ontario Parks staff. Kruskal-Wallis tests were used to determine if the different damage indices reveal any influence of cormorant nest density in smaller localized areas as opposed to testing the entirety of the islands. Kruskal-Wallis tests indicated that, island-wide, none of the herbaceous species abundance, diversity (total, native or exotic), seed bank composition, or seed viability has been affected significantly (P > 0.05) by either cormorant nest numbers or large-diameter litter-fall from cormorant nesting activities. However, damage indices (calculated using aerial photography) did indicate that, P .auritus nest density does influence litter depth, herbaceous species abundance and diversity in the island perimeter. Nest density has not significantly affected seed bank abundance or seed viability. My conclusion is that cormorants do not uniformly affect the islands as there is localized damage to the herbaceous layer, restricted primarily to the perimeters of the islands. However, there remains a risk to the interior herbaceous layer of the island if the effects of nesting pressures at the edges advance inward from this perimeter.

Abstract Managing protected areas requires consideration of broad scale social, ecological and in some cases, political factors. Additionally, the impacts of hyperabundant species is often a concern in protected areas as increases in breeding and foraging pressures can alter habitats dramatically. The influences of hyberabundant nesting colonies of waterbird species are well documented. Many studies indicate that waterbird species can influence canopy species as especially on the shoreline of islands, where the most abundant nesting pressures occur. On Lake Erie, Phalacrocorax auritus populations have increased dramatically from a low of 87 nests in 1979 to 16,050 nests in 2007. However, most studies have failed to address the influences that mature tree death may have on the ground layer ecosystem, including increased litter depth, herbaceous species composition and abundance and seed bank composition and viability. Consequently this study sought to quantify the nesting colonies’ influence on coarse woody litter and how nest densities and litter depth influence the herbaceous layer, the seed bank composition and viability across the extent of three Lake Erie islands. My study was designed to quantify the nesting colonies’ influence on these variables across the extent of each island, rather than just the perimeters where the majority of cormorant nests and visible damage exists. I collected my data in the summer of 2008 on East Sister Island, Middle Island and West Sister Island, using plotless-point quarter method, herbaceous layer surveys (incorporating data collected by Parks Canada and Ontario Parks in 2004 and 2007), cormorant nest counts, soil seed bank cores, and litter depth measurements. To test whether there are specific impacts of cormorant nests relegated to the island perimeters versus the rest of the island, an available subset of data on East Sister Island and Middle Island were used. These were expressed as vegetation ‘damage indices’ as classified by Parks Canada and Ontario Parks staff. Kruskal-Wallis tests were used to determine if the different damage indices reveal any influence of cormorant nest density in smaller localized areas as opposed to testing the entirety of the islands. Kruskal-Wallis tests indicated that, island-wide, none of the herbaceous species abundance, diversity (total, native or exotic), seed bank composition, or seed viability has been affected significantly (P > 0.05) by either cormorant nest numbers or large-diameter litter-fall from cormorant nesting activities. However, damage indices (calculated using aerial photography) did indicate that, P .auritus nest density does influence litter depth, herbaceous species abundance and diversity in the island perimeter. Nest density has not significantly affected seed bank abundance or seed viability. My conclusion is that cormorants do not uniformly affect the islands as there is localized damage to the herbaceous layer, restricted primarily to the perimeters of the islands. However, there remains a risk to the interior herbaceous layer of the island if the effects of nesting pressures at the edges advance inward from this perimeter.

Made available in DSpace on 2015-04-17T14:55:16Z (GMT). No. of bitstreams: 1 arquivototal.pdf: 1302187 bytes, checksum: c5e711d7d5aae70cd68adbb071c9becf (MD5) Previous issue date: 2011-02-25 / Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPES / Terrestrial ecosystems, solitary bees and wasps play important roles as pollinators, predators and parasites. Most part of the life of these Hymenoptera is designed to aspects related to nesting, including the search of the nest site, nest construction and food collection to rear the larvae. However, in natural environments the nests of these insects are difficult to find. A solution to this problem, at least for some species, is the use of artificial burrows in the field (trap nests). Using trap nests it is possible to collect standardized samples and to study the biology of some species. Thus, the community of solitary bees and wasps, nesting in trap nests was evaluated using parameters such as richness, diversity and nest abundance in two different agroecosystems of the state of Pernambuco, northeastern Brazil: sugarcane monoculture and polyculture. Moreover, the natural history and nesting biology of a bee species (Megachile dentipes) collected in the trap nests was studied. In this study, the main aspects of life history (seasonality, diameter of the nests, sex ratio, parasitism, development time) and nesting biology (nest architecture, nesting behavior, larval diet) was studied. Insects were sampled using the technique of trap nests, which consisted of 1) cardboard tubes inserted into blocks of wood of different diameters (4, 6, 8 and 10 mm), and 2) wooden planks, drilled lengthwise (5, 6, 8, 10 and 12 mm in diameter) and covered with a transparent plastic sheet (observation-nests). In each agroecosystem 3.360 cardboard tubes were available for nesting during one year (June/2009 to May/2010) and 1000 holes of observationnests during five months (October/2009 to February/2010). In the monoculture a total of 259 nests, 86 (33.2%) build by bees and 173 (66.8%) by wasps were sampled. Five species of bees were sampled, and Megachile dentipes was the most abundant bee species in the sugarcane (n = 76; 85%). In the polyculture area, 411 nests were collected, being 254 (61.8%) of bees and 157 (38.2%) of wasps. In this environment, 14 spp. nesting bee species were recorded. The leaf-cutter bee Megachile dentipes was also the most abundant (n = 117 nests, 46%). The abundance of bee nests, species richness and diversity of bees and wasps was significantly higher in the polyculture area compared to monoculture area. It is suggested that plant richness is a determining factor in the occurrence of the species. However, other factors such as distance from forest fragments and the use of herbicides and burning, might have influence in the low richness and diversity of bees and wasps in the area with sugarcane monoculture. Regarding Megachile dentipes it was shown that it is an polilectic species, collecting pollen from a wide spectrum pollen from mainly five botanical families: Asteraceae, Rubiaceae, Euphorbiaceae, Mimosaceae and Scrophulariaceae. This species showed a clear preference for nesting in the dry periods of the year in both studied areas, with peaks in October and December. Furthermore, this species had several generations throughout the year (multivoltine). It was demonstrated experimentally that recognition of the cavities by females is determined by the nest position in the blocks. Probably, chemical signals (marking the cavity) are not used, at least in the initial recognition of the nests. Nest structure of M. dentipes differs from most species because the lining of the brood cell is made from chewed leaves unlike the other species that involve the brood cells with whole leaves not chewed.. Biological and ecological characteristics of M. dentipes, as e.g. abundance and poliletia, makes this species a good candidate for management programs aimed at pollination, but further studies are necessary for that purpose. / Nos ecossistemas terrestres, abelhas e vespas solitárias desempenham essenciais papéis como polinizadores, predadores e parasitas. Grande parte da vida das fêmeas desses himenopteros é destinada à nidificação, como busca pelo local do ninho, construção do ninho e coleta do alimento larval. Contudo, os ninhos desses insetos em ambientes naturais são difíceis de serem encontrados. Uma solução para este problema, pelo menos para algumas espécies, é a utilização de cavidades artificiais no campo (ninhosarmadilha), uma vez que amostragens dos ninhos podem ser realizadas de forma padronizada em diferentes ambientes, além de fornecerem dados acerca da biologia das espécies capturadas. Diante disso, a comunidade de abelhas e vespas solitárias nidificantes em ninhos armadilha foi avaliada a partir de parâmetros como riqueza, diversidade e abundância de ninhos em dois agroecossistemas em Pernambuco: monocultura canavieira e sistema de policultura. Além disso, foi estudada a história natural e biologia de nidificação da espécie de abelha (Megachile dentipes) mais abundante nos ninhos-armadilha. Neste estudo foram avaliados os principais aspectos relacionados à história de vida (sazonalidade, razão sexual, parasitismo, tempo de desenvolvimento) e biologia de nidificação (arquitetura do ninho, comportamento de nidificação, dieta larval) de M. dentipes. Os insetos foram amostrados através da técnica de ninhos-armadilha, que consistiu de 1) tubos de cartolina inseridos em blocos de madeira de diferentes diâmetros (4, 6, 8 e 10 mm), e 2) pranchas de madeira, perfuradas longitudinalmente (5, 6, 8, 10 e 12 mm de diâmetro), cobertas com uma lâmina plástica transparente (ninhos-observação). Em cada agroecossistema estudado, foram disponibilizados para nidificação 3.360 tubos de cartolina ao longo de um ano (junho/2009 a maio/2010), e 1.000 cavidades de ninhos-observação durante cinco meses (outubro/2009 a fevereiro/2010). Um total de 259 ninhos, sendo 86 (33,2%) de abelhas e 173 (66,8%) de vespas foi coletado nas armadilhas instaladas na monocultura. Foram amostradas 5 espécies de abelhas, dentre elas, Megachile dentipes, a espécie de abelha mais abundante no canavial (n=76; 85%). Na área com policultura, foram coletados 411 ninhos, sendo 254 (61,8%) de abelhas e 157 (38,2%) de vespas. Neste ambiente, foram registradas 14 spp. de abelhas nidificantes ninhos armadilha. Mais uma vez, a espécie de abelha corta folha Megachile dentipes foi a mais abundante em número de ninhos (n=117; 46%). A abundância de ninhos de abelhas e a riqueza e diversidade de espécies de abelhas e vespas nidificantes em ninhos-armadilha foi significativamente maior em área de policultura quando comparada à monocultura canavieira. É sugerido que a riqueza florística de cada área seja um fator determinante na ocorrência das espécies. Contudo, fatores como a distância de fragmentos de mata e a utilização de herbicidas e queimadas, podem ter colaborado para uma baixa riqueza e diversidade de abelhas e vespas na área com monocultura canavieira. Quanto à espécie Megachile dentipes, observou-se que trata-se de uma espécie polilética, que coleta pólen de um amplo espectro polínico envolvendo, principalmente, cinco famílias botânicas: Asteraceae, Rubiaceae, Euphorbiaceae, Mimosaceae e Scrophulariaceae. Esta espécie mostrou uma clara preferência em fundar ninhos nos períodos mais secos do ano, em ambas as áreas estudadas, com picos de nidificação em outubro e dezembro. Além disso, apresentou várias gerações ao longo do ano (multivoltina). Foi demonstrado experimentalmente que o reconhecimento das cavidades pelas fêmeas baseia-se na posição em que o orifício se encontra no bloco de ninhos-armadilha. Provavelmente, não estão envolvidos sinais químicos (marcação da cavidade) ao menos no reconhecimento inicial dos ninhos. A estrutura do ninho de M. dentipes difere da maioria das espécies descritas até o momento, pois o revestimento da célula de cria é feito com folhas trituradas (manipuladas), diferentemente das demais espécies que envolvem as células de cria com folhas inteiras não trituradas. Características biológicas e ecológicas de M. dentipes, como e.g. abundância e polilectia, tornam esta espécie uma boa candidata a programas de manejo visando a polinização, embora sejam necessários mais estudos direcionados a essa finalidade.

Herbage and cattle production in semi-arid regions are primarily controlled by climate variation particularly rainfall variability and secondarily by disturbances such as drought, grazing and fire. These factors interact at different spatial and temporal scales in a complex manner difficult to observe or comprehend and, reduce availability and quality of herbage and cattle productivity. Variables for quantifying rangeland productivity are thus rarely available and unreliable yet options for sustainable management are limited. Grazing experiments have provided useful insight about ecological and management factors involved in rangeland functioning, but they have limited scope to deal with high environmental variation. This highlights the need for a systems approach for monitoring rangeland and cattle productivity at the appropriate spatial and temporal scales to enable productivity to be maximised whilst risk to climate variation is minimised. This study explored two broad objectives: to determine the ranch-scale impacts of rainfall variability and drought on herbaceous aboveground biomass (AGB) using optical remote sensing; and to parameterise, evaluate and apply a systems model, the Sustainable Grazing Systems (SGS) whole farm model to complement grazing experiments in assessing the effects of grazing strategies on beef cattle production. To determine rainfall variability impacts, twenty regression models were firstly developed between measured herbaceous AGB and, classical and extended multispectral vegetation indices (MVIs) derived from a Landsat 8 image. End-of-season herbaceous AGB was predicted with high accuracy (r2 range = 0.55 to 0.71; RMSE range = 840 to 1480 kgha-1). The most accurate model was used to construct a regression between rainfall and AGB derived from peak-season Landsat images available between 1992 and 2017. Standardised precipitation index and standardised anomalies of herbaceous AGB production were then used in a convergence of evidence approach to determine the response of AGB to rainfall variability and drought intensity. Total wet season rainfall revealed high variability (33 to 41 % CV) and subsequent herbaceous AGB production were 18 to 35 % more variable. Spatial heterogeneity of AGB production across herbaceous communities were high and deviated from mean AGB by 51 to 69 %. Landscape-level temporal variation of AGB production remained stable despite the increase of climate variability experienced in the region in the past 50 years. Climate inputs and parameter sets for upper-, mid- and foot- slope land types and key grass species, Urochloa mosambicensis and Eragrostis curvula were developed by integrating spatial data with previous soil surveys and extensive reviews of published experiments. A simulation experiment was conducted between 1992 and 2017 for all combinations of land types and grass species to analyse the extent of improvement resulting from parameter adjustments. The SGS model predicted the growth pattern known for grasses native to dry regions of southern Africa. The model represented measured herbaceous biomass moderately well (r2 = 0.57), at low average error (RMSE, 820 kg DM ha-1) despite huge discrepancies in summary statistics for measured (mean, 3877 kg DM ha-1) and simulated (mean, 3071 kg DM ha-1) biomass and residuals. Model predictions were also significantly correlated with remotely sensed AGB (r2 = 0.46) at reasonable overall performance error (RMSE, 981 kg DM ha-1). The integrated workflow developed for parameterising and calibrating the SGS pasture-simulation model can benefit model users in data-constrained environments. Animal growth parameters specific to Brahman weaner steers were defined in the SGS model to enable evaluation of impacts of recommended (10 haLU-1) and other three stocking rates (7, 15 and 20 haLU-1) and multi-paddock grazing systems (2-, 3- and 4- paddocks per herd) on rangeland productivity. Overall, there were no observable differences in herbage production and dry matter intake irrespective of stocking rate and multi-paddock grazing system. But stocking rate effects on animal production were more pronounced compared to multi-paddock grazing systems. To maximise cattle productivity in semi-arid rangelands, management should be emphasised on manipulation of stocking rates over multi-paddock grazing systems. Keywords Rangeland monitoring, climate risk, sustainability, animal productivity, grazing strategies / Thesis (PhD (Animal Production Management))--University of Pretoria, 2020. / National Research Foundation of South Africa / University of Pretoria Department of Research and Innovation Support / Animal and Wildlife Sciences / PhD / Unrestricted

Herbaceous perennials represent a considerable portion of potential biomass feedstocks available for the growing bioenergy industry. Their chemical composition and biomass yields, which are important in determining ethanol potential on an area and mass basis, vary with plant variety and type, environment, and management practices. Therefore, a study was conducted to assess the variability of lignin and carbohydrate content, biomass yields, and theoretical ethanol yields on an area basis among different herbaceous perennial species combinations grown in Minot (2008) and Williston (2008, 2009, and 2010), North Dakota (ND). After wet chemistry compositional analysis was done, the carbohydrate contents were used to determine theoretical ethanol potential on a mass basis. Using the dry-matter yield, the theoretical ethanol yield on an area basis was also calculated for these biomass species. Total carbohydrate content for the biomass samples in Williston and Minot varied from 45 to 61% dry basis. Analysis of Variance (ANOVA) at a= 0.05 showed that carbohydrate content varied between years and environments. Also an interaction plot shows that no biomass species had consistently higher or lower carbohydrate content in the different environments. Switchgrass (Panicum vigatum L.) grown as single species or together with other perennial grasses had higher dry-matter yield and theoretical ethanol yield potential in Williston irrigated plots while mixtures containing intermediate or tall wheatgrass species (Thinopyrum spp.) produced better yields in Minot non-irrigated plots. Variability in theoretical ethanol yield on a mass basis (3.7% coefficient of variation (CV) in Williston and 9.7% CV in Minot) was much less than the variability in dry-matter yields (27.5% CV in Williston and 14.8% CV Minot). Therefore, biomass production is much more important than composition in choosing species to grow for ethanol production. Recently, many studies have focused on developing faster methods to determine biomass composition using near infrared (NIR) spectroscopy. Other NIR models have been developed on single biomass feedstocks but a broad-based model for mixed herbaceous perennials is yet to be developed. Therefore, NIR calibration models for lignin, glucan, and xylan were developed with 65 mixed herbaceous perennial species using a DA 7200 NIR spectrometer (950 - 1,650 nm) and GRAMS statistical software. The models for lignin and xylan had R(2) values of 0.844 and 0.872, respectively, upon validation and are classified as good for quality assurance purposes while glucan model had an R(2) of 0.81 which is considered sufficient for screening. The R(2) and the root mean square error of prediction (RMSEP) results showed that it is possible to develop calibration models to predict chemical composition for mixed perennial biomass when compared with results for models developed for single feedstock by Wolfrum and Sluiter (2009) and Liu et al. (2010). Studying the variability in predicting constituents using NIR spectroscopy over time (hours and days), it was observed that the average CV was between 1.4 to 1.6%. The average CV due to repacking (presentation) alone was 1.3%. The CVs for NIR predictions ranged between 1.4 to 5.7% while for wet chemistry ranged between 3.8 to 13.5%; hence, NIR predictions were more precise than wet chemistry analysis.

The encroachment of rangelands by woody plants causes an imbalance in the grass:bush ratio leading to decline in ecosystem services including grazing capacity, biodiversity, and water yield. This study assessed the historical changes in woody cover, and the effects of bush clearing on water loss, atmospheric carbon uptake, herbaceous vegetation, and soil seed bank (SSB) dynamics. The study was conducted at Makapanstad (Radi and Maseding) and Kgomokgomo rangelands, North-West Province, South Africa. Landsat imagery was used to assess woody cover over 34 years (1984 - 2018) in a total area of 16 397 ha. Evapotranspiration (ET) and gross primary productivity (GPP) were assessed in cleared sites and their adjacent uncleared sites from 2013 to 2018. Woody plant densities, herbaceous composition, ground cover and biomass production were assessed in 24, 5×5-m plots distributed equally in three 2500-m2 bush-encroached blocks in each rangeland in February 2016. Three samples for soil nutrient analysis were collected 20-cm deep in each plot. Thereafter, half (1250-m2) of each block was mechanically cleared to make three replicates of cleared and uncleared microsites. Post-treatment survey of vegetation was conducted in February 2017. SSB was assessed for samples collected in April 2016 before bush clearing and in August, October and December 2016, and April and August 2017 in paired microsites. In 1984, herbaceous cover (humid + arid grasslands) dominated, accounting for 36% of the total area followed by woody cover (shrublands + bushlands) and unvegetated cover (bare soils + abandoned croplands), with respective proportions of 33 and 31%. There were substantial land cover changes over time, with shrub cover increasing linearly (r2 = 0.94, p < 0.05) at a rate of 0.26% year-1, increasing the total woody cover (TWC) to 38% in 2018. Cropland abandonment was the main driver of increase in shrub cover in the study area. Herbaceous cover declined with increase in TWC (r2 = 0.69), whereas bare soil cover increased (r2 = 0.70) with TWC over time. The main encroachers were Vachellia tenuispina at Radi, Vachellia tortilis at Maseding and Dichrostachys cinerea and V. tortilis at Kgomokgomo. Most of the woody species correlated with total N and clay content (r = 0.96; p < 0.05) in black vertic clay soils of Radi and Maseding, whereas non-leguminous species correlated with total N and C:N in the red-yellow apedal soils of Kgomokgomo. ET and GPP varied interannually in all rangelands and both declined significantly (p < 0.05) after bush clearing at Radi and Kgomokgomo but not at Maseding. ET increased with GPP in cleared (r2 = 0.50-0.59) and uncleared sites (r2 = 0.82-0.93) at Radi and they showed a strong relationship (r2 >0.70) in both sites at Maseding and Kgomokgomo. ET ranged from 0.26-0.46 and 0.48-0.97 Kg H2O m-2 day-1 in cleared and uncleared sites, respectively, at Radi and from 0.44-0.98 and 0.63-1.24 Kg H2O m-2 day-1 at Kgomokgomo. Total SSB densities (constituted mostly by early successional species) increased significantly (p < 0.05) to 2470, 1872 and 693 seeds m-2 at Radi, Maseding and Kgomokgomo, respectively, in cleared microsites in August 2017. Similarly, biomass production (BP) and basal cover (BC) were highest in cleared relative to uncleared microsites. Overall, increase in woody cover reduced herbaceous cover and this calls for bush control in the studied rangelands. The decline in ET after bush clearing suggested that bush clearing could be used to increase rangeland water yield. Increased SSB densities, BP and BC indicated that bush clearing facilitates passive restoration. / Thesis (PhD (Pasture Science))--University of Pretoria, 2020. / Agricultural Research Council / National Research Foundation / Plant Production and Soil Science / PhD (Pasture Science) / Unrestricted

There are numerous situations where trees are grown together with herbaceous plants. In these situations there will be some degree of competition between their root zones, depending on the water content of the soils and crop and tree root distribution . Two studies were conducted : the first with maple (Acer platanoides) grown in turf grass, and the second with willow (Salix matsudana) grown in more deeply rooted barley . The objectives of this study were to quantify the effect of herbaceous competition of potential tree water stress under irrigation and when the soil is allowed to dry-down . Soil water uptake was measured in both studies to 1.2 m depth and outwards to 1.2-2.10 m away from the tree . In the maple-turf grass study, water content was measured in a single line away from the tree , while four lines covering a quadrant of the surface area were measured in willow . Water relations stomatal conductance and water potential, and tree growth were also monitored in both studies. Water uptake in turf plots was statistically different from mulch plots by depth and distance during three seasons. Water uptake was greatest at 0-60 cm depth in the turf treatments compared with mulch treatments. Soil water in mulched plots decreased slowly during the growing season. There were no statistical differences between bare soil and barley competition water uptake after soil surface water was depleted. There were marked differences in tree root characteristics as a result of competition from turf or barley roots. The root systems of maples in the mulch and willow in bare soil extended laterally and fine roots were evident. Tree roots extended deeper and fine root were reduced under competition from turf and barley. Trees growing with turf and barley had fewer roots in the top 0.3 m soil surface while trees in mulch and bare soil had more and greater diameter roots at the same depth. Early in the season, when water content is high, root competition for water was not evident, and late in the season after turf roots and barley had depleted the soil water, trees exhibited more negative predawn leaf water potential and less stomatal conductance in response to water stress during a soil dry-down period. Tree growth was measured periodically during 1994, 1995, and 1996. Leaf area and stem growth comparisons showed a significant increase in size as a result of the absence of competition in both species, with mulch and bare soil treatments. Leaf area in mulched trees was twice that in turf treatments. In summary, we found that competition resulted in deeper tree root growth and less top growth in the presence of herbaceous competitors.