Type 1 Diabetes (T1D) is an autoimmune disease characterized by islet -specific T cells that infiltrate the pancreas and destroy the β-cells, crippling the necessary supply of insulin to control blood glucose levels. Although the disease can be managed by blood glucose monitoring, insulin injections and strict dietary regimens, there is currently no cure and complications continue to cause significant morbidity and mortality. Immunotherapies designed to inhibit islet-specific T cells are an attractive approach to treat T1D. Antibodies blocking the Interleukin-7/Interleukin-7 Receptor α (IL-7/IL-7Rα) pathway, which is critical for naïve and memory T cell survival, have shown promise in the non-obese diabetic (NOD) mouse model. Systemic administration of anti-IL-7Rα antibodies have prevented and reversed T1D in these models. However, hyperglycemia returned upon cessation of treatment, indicating no durable tolerance was established. Because of these results, I sought to better understand the mechanisms underlying the impact of IL-7Rα blockade on conventional islet-specific T cells and regulatory T cells (Tregs). I hypothesized that IL-7 signaling blockade (1) altered metabolism leading to impaired diabetogenic T cell effector functions and (2) impaired Tregs in peripheral tissues, potentially diminishing the therapeutic activity of anti-IL-7Rα antibodies. The data show that IL-7 signaling blockade impaired mitochondrial respiration independent of calcium signaling and downstream proteins. Impaired respiration shifted T cells to a more inefficient metabolic state. These inefficiencies were associated with diminished pro-inflammatory cytokine production. The cell-intrinsic role of IL-7 signaling in Tregs was assessed by crossing floxed IL-7Rα NOD mice with NOD mice that expressed Cre recombinase exclusively in Foxp3+ Tregs. At the onset of T1D IL-7Rα-deficient Tregs presented in lower frequencies than IL-7Rα-sufficient Tregs in pancreatic lymph nodes, and expressed higher levels of the co-inhibitory receptors PD-1 and TIGIT, indicating a more exhausted phenotype. Importantly, NOD mice with IL-7Rα-deficient Tregs developed T1D earlier. The data presented herein show that IL-7 signaling regulates T cell mitochondrial metabolism, T cell effector function, and identifies a role for IL-7 in the survival and function of Tregs in peripheral tissues during T1D development. This work simultaneously validates the IL-7 pathway as a potential immunotherapeutic target to modulate islet-specific T cells and cautions that unintended effects on protective Tregs must be taken into account for therapeutic strategies.

Interleukin-7 is an essential cytokine that plays a major role in the development and homeostatic maintenance of T-cells. The presence of soluble forms of various cytokine receptors have been proposed to be involved in the endogenous regulation of cytokine activity. Due to the natural ability of soluble CD127 (sCD127) to bind to IL-7, there is an interest in its potential application as an immunotherapeutic agent in diseases, where IL-7 has been found to be relevant, including HIV infection. In this study, I hypothesize that by administering sCD127 to healthy mice, IL-7 activity should be enhanced, thus enhancing T cell proliferation in vivo. The work presented here focuses on three main objectives: 1) evaluating the effect of IL-7 with or without sCD127 on T cell proliferation in healthy mice; 2) validating a mouse model of T cell depletion using anti-CD4 and CD8 antibodies; and 3) determining the effect of sCD127 treatment with or without IL-7 on T cell reconstitution and proliferation in the T cell depletion model. To assess the effect of administering exogenous sCD127, IL-7 or the combination on T cell proliferation, peripheral blood mononuclear cells and spleen were isolated, and stained to characterize T cell number, proliferation, and surface CD127 expression by flow cytometry. For the T cell depletion model, wild type C57BL/6 mice were injected intra-peritoneally with 150 μg single dose of anti-CD4 and anti-CD8 depleting antibodies. Consequently, mice were bled weekly to demonstrate the kinetics of T cell reconstitution following depletion (from d7 to d63). Our results demonstrated that in healthy mice daily treatment with murine IL-7 significantly stimulated T cell proliferation and consequently increased cell number. This observation was further boosted by pre-complexing IL-7 with sCD127. For T cell depletion experiments, the kinetics of T-cell reconstitution was different between the CD4+ and CD8+ T cells. CD4+ T cell reconstitution was almost complete 6 weeks following T cell depletion, while CD8+ T cells were only partially reconstituted at this time point. Treatment with IL-7 or combined therapy had a transient and significant effect on T cell proliferation and reconstitution, and this influence was abrogated after treatment discontinuation. Interestingly, CD8+ T cells exert greater responses to our treatments in that a more pronounced proliferation and significant increase in cell number was observed relative to the effect seen on CD4+ T cells in both healthy and depleted mice. In conclusion, antibody-mediated T cell depletion is a potentially valuable tool to investigate lymphopenia-induced proliferation and potential therapies thereof. This study suggests that combining sCD127 and IL-7 therapies enhances IL-7-mediated T cell proliferation, and provides important information for the potential therapeutic use of sCD127 and its impact on IL-7 function.

京都大学 / 0048 / 新制・課程博士 / 博士(生命科学) / 甲第20533号 / 生博第375号 / 新制||生||50(附属図書館) / 京都大学大学院生命科学研究科高次生命科学専攻 / (主査)教授 杉田 昌彦, 教授 米原 伸, 教授 清水 章 / 学位規則第4条第1項該当 / Doctor of Philosophy in Life Sciences / Kyoto University / DFAM

付記する学位プログラム名: 京都大学卓越大学院プログラム「メディカルイノベーション大学院プログラム」 / 京都大学 / 新制・課程博士 / 博士(薬科学) / 甲第24547号 / 薬科博第164号 / 新制||薬科||18(附属図書館) / 京都大学大学院薬学研究科薬科学専攻 / (主査)教授 生田 宏一, 教授 橋口 隆生, 教授 木村 郁夫 / 学位規則第4条第1項該当 / Doctor of Pharmaceutical Sciences / Kyoto University / DFAM

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Fundação de Amparo a Pesquisa do Estado de Minas Gerais / Chagas disease, caused by the protozoan Trypanosoma cruzi, is ranked as the most serious parasitic disease in Latin America and has become a worldwide problem. A bulk of studies substantiates that Th1-associated cytokines are essential elements in early resistance against the parasite and are associated with the development of the chronic cardiac form. Although cytokines have a key role in the immune response against T. cruzi, little is known about IL-3, IL-7 and IL-9 in this context. Then the aim of this study was to analyze the role of IL-3, IL-7 and IL-9 in the acute phase of T. cruzi experimental infection. For this purpose, parameters indicative of improvement in clinical status of the animals both infected and treated as just treated were studied, such as: morbidity, mortality and histopathology. The amount of cardiac mast cells and the serum cytokines profile were also evaluated. Our data revealed that the treatment with IL-3, IL-7 or IL-9 did not alter the clinical parameters analyzed or the amount of cardiac mast cells in mice infected with T. cruzi. However the treatment with IL-3 decreased the cardiac T. cruzi-induced inflammation and the treatment with IL-7 increased serum levels of IL-5 in infected animals. In addition, the treatment with IL-9 increased the serum levels of Th1 cytokine profile (IL-2, IFN-y and TNF-α) and decreased cardiac fibrosis in infected animals, suggesting a possible protective role of this cytokine in this context. Taken together, our results underline the importance of these cytokines in modulation of T. cruzi infection. Since studies involving IL-3, IL-7 and IL-9 activity during Chagas disease are critical in understanding the parasite control process and the protective and/or harmful action of these cytokines in the host. In addition, understanding of the immunological mechanisms mediated by these cytokines that are involved in disease development may contribute to the establishment of new therapeutic interventions to prevent Chagas disease and treat their symptomatic forms. / A Doença de Chagas, causada pelo protozoário Trypanosoma cruzi, é classificada como a doença parasitária mais grave da América Latina e tornou-se um problema mundial. A maior parte dos estudos confirma que as citocinas de perfil Th1 são elementos essenciais na resistência precoce contra o parasita e estão associadas ao desenvolvimento da forma cardíaca crônica. Embora as citocinas tenham um papel chave na resposta imune contra T. cruzi, pouco se sabe a respeito da função de IL-3, IL-7 e IL-9 neste contexto. Assim, o objetivo deste estudo foi analisar o papel destas citocinas na fase aguda da infecção experimental com T. cruzi. Para isto, parâmetros indicativos de melhora clínica dos animais tanto infectados e tratados como apenas tratados foram estudados, tais como: morbidade, mortalidade e histopatologia. A quantidade de mastócitos cardíacos e o perfil de citocinas séricas também foram avaliados. Os dados revelaram que o tratamento com IL-3, IL-7 ou IL-9 não alterou os parâmetros clínicos analisados nem a quantidade de mastócitos cardíacos nos camundongos infectados com T. cruzi. No entanto, o tratamento com IL-3 diminuiu a inflamação cardíaca T. cruzi-induzida e o tratamento com IL-7 aumentou os níveis séricos de IL-5 nos animais infectados. Além disso, o tratamento com IL-9 aumentou os níveis séricos das citocinas de perfil Th1 (IL-2, IFN-y e TNF-α) e diminuiu a fibrose cardíaca nos animais infectados, sugerindo um possível papel protetor desta citocina neste contexto. Em suma, os nossos resultados demonstram a importância destas citocinas na modulação da infecção por T. cruzi. Já que estudos envolvendo a atividade de IL-3, IL-7 e IL-9 durante a doença de Chagas são fundamentais na compreensão sobre o processo de controle parasitário e da ação protetora e/ou prejudicial dessas citocinas no hospedeiro. Além disso, o entendimento dos mecanismos imunológicos mediados por estas citocinas que estão envolvidos no desenvolvimento da doença pode contribuir para o estabelecimento de novas intervenções terapêuticas a fim de prevenir a doença de Chagas e tratar suas formas sintomáticas / Doutor em Imunologia e Parasitologia Aplicadas

Les cellules dendritiques (CD) et l'interleukine-7 (IL-7) sont deux facteurs essentiels au développement et à l'homéostasie des lymphocytes T. Une anomalie de la production ou de la signalisation de l’IL-7 est associée à un défaut de la thymopoïèse en plus d’une profonde lymphopénie. Parallèlement, la déficience des CD, entraine une rupture de la tolérance au soi menant au développement de maladies auto-immunes et une altération de l’homéostasie des Lymphocyte T. Dans le cadre de cette thèse, nous nous sommes intéressés globalement à la contribution de l’IL-7 et des CD dans la reconstitution et l'homéostasie des lymphocytes dans deux contextes thérapeutiques différents. Premièrement, il a été démontré que le traitement avec l'imatinib (médicament utilisé pour traiter la leucémie myéloïde chronique (LMC)) induisait une diminution du nombre de lymphocytes T chez les patients atteints de LMC. À partir de notre étude in vitro sur des cellules mononuclées du sang périphérique (peripheral blood mononuclear cells) (PBMC) humaines cultivées en présence d’imatinib avant d’être stimuler par l’IL-7 à différentes concentrations, nous avons mis en évidence une perturbation de la signalisation de l’IL-7 dans les lymphocytes T suite à une interférence avec l’imatinib. À l’aide de notre modèle murin traité à l’imatinib, nous avons également montré in vivo, une altération de l’homéostasie des lymphocyte T. La modulation négative de l’homéostasie des LT par l’imatinib est également accompagnée d’une diminution dramatique de la proportion des CD, ce qui pourrait également faire décliner le pool des lymphocyte T. Deuxièmement, dans un contexte de greffe de moelle osseuse (MO) syngénique, nous avons analysé la contribution de l’IL-7 produite par les CD, dans la thymopoïèse et l’homéostasie des lymphocyte T. Pour évaluer la contribution de l’IL-7 produite par les cellules hématopoïétiques dans la reconstitution et l’homéostasie lymphocytaire T, nous avons généré des chimères de MO avec une production d’IL-7 exclusivement limitée aux cellules stromales, par greffe de MO IL-7-/- dans des souris Rag -/-. Les souris Rag -/- transplantées avec des cellules de MO IL-7 - /- développent une maladie auto-immune systémique létale à 4-5 semaines post greffe. Nos résultats suggèrent fortement une contribution cruciale de l’IL-7 produite par les CSH (Cellules Souches Hématopoïétiques) dans la reconstitution immunitaire après greffe de MO. L’ensemble de nos travaux contribue à élargir la compréhension de la biologie de l'axe IL-7/ IL-7Rα et des CD dans le développement et l’homéostasie des lymphocytes T. / Dendritic cells (DCs) and interleukin-7 (IL-7) are two factors essential for the development and homeostasis of T lymphocytes. An abnormality in the production or signaling of IL-7 is associated with a defective thymopoiesis and severe lymphopenia. DCs deficiency leads to a breakdown in self-tolerance leading to the development of autoimmune diseases and impaired T cells homeostasis. In this thesis, we have focused on the contribution of IL-7 and DCs in the reconstitution and homeostasis of lymphocytes in two different therapeutic contexts. Firstly, imatinib (drug used to treat chronic myeloid leukemia (CML)) has been shown to induce a decrease of T lymphocytes number in patients with CML. From our in vitro study on human peripheral blood mononuclear cells (PBMCs) cultured in the presence of imatinib before stimulation by IL-7 at different concentrations, we demonstrated a disruption of IL-7 signaling in T cells following interference with imatinib. Using our imatinib-treated mouse model, we also showed in vivo impaired T cells homeostasis. The negative modulation of T lymphocytes homeostasis by imatinib is also accompanied by a dramatic decrease in the proportion of DCs, which could also decline T cells pool. Secondly, we used murine syngeneic bone marrow transplantation (BMT) models to study the contribution of IL-7 produced by DCs in thymopoiesis and T cells homeostasis. To assess the role of IL-7 produced by DCs in T cell reconstitution and homeostasis, we generated BM chimeras with IL-7 production exclusively limited to stromal cells, by BMT of IL-7 - / - into Rag - / - mice. Rag - / - mice transplanted with IL-7 -/- BM cells develop a lethal systemic autoimmune disease post-transplant at 4-5 weeks post-BMT. Our results strongly suggest a major contribution of Hematopoietic stem cells (HSC)-produced IL-7 in immune reconstitution after BM transplantation. Our work contributes to expanding our understanding of the biology of the IL-7 / IL-7Rα axis and DCs in T cell development and homeostasis.

Successful treatment of cancer with adoptive immunotherapy (AIT) is dependent on the ability to produce large numbers of tumor-specific, functional T cells. The purpose of this thesis is to explore ways in which T cell expansion could be augmented. We have focused on exploring alternate gamma chain cytokines as stimulators of T cell proliferation and differentiation in addition to investigating the potential usefulness of gemcitabine (GEM) in abrogating the immunosuppressive effects of myeloid derived suppressor cells (MDSCs). B16 melanoma sensitized draining lymph node cells that have been activated in vitro with bryostatin-1 and ionomycin (B/I) were expanded in either IL-7/15 or in IL-2. We found that IL-7/15 was superior to IL-2 in expanding T cells for AIT of pulmonary metastases. Expansion of antitumor T cells was also improved by suppressing accumulation of MDSCs in mice bearing 4T1 mammary carcinoma using GEM. GEM directly inhibits both 4T1 mammary carcinoma cells and MDSCs. Its inhibition of MDSCs rescued tolerant T cells, augmenting both expansion and response to tumor antigen.

Le promoteur viral module la transcription et par conséquent la réplication virale. Le promoteur du VIH-1 est polymorphe pour une variété de sites de fixation de facteurs de transcription, toutefois l'impact de ce polymorphisme sur la réplication virale in vivo n'est pas élucidé. Nous avons construit des virus chimères isogèniques portant le promoteur minimal des sous-types B, C, et E du VIH-1 dans le génome du VISmac239. Dans quatre macaques rhésus co-infectés avec les trois chimères, une discordance entre les génotypes des virus associés aux rPBMCs et des virions du sérum est observée lors de la primo-infection. Un changement dans le génotype viral est également visible entre la primo-infection et la phase asymptomatique. Nos résultats montrent que le polymorphisme du promoteur des sous-types du VIH-1 constitue un déterminant majeur pour la réplication et la dissémination virale, et que la virémie en primo-infection est majoritairement due à la réplication virale dans l'intestin.

Abstract : Long-term survival of T lymphocytes in a quiescent state is essential to maintain their cell numbers in secondary lymphoid organs. Interaction of the T cell antigen receptor (TCR) with self-peptide/MHC synergizes with IL-7-induced anti-apoptotic signals to promote T cell survival. These extrinsic stimuli are also implicated in T cell metabolism and survival by regulating several signaling pathways including the phosphatidyl-inositol-3 kinase (PI3K)/Akt pathway. In mice and in rats, loss of functional GTPase of the immune associated nucleotide binding protein 5 (GIMAP5) causes peripheral T lymphopenia due to spontaneous death of T cells. The underlying mechanisms responsible for the pro-survival function of GIMAP5 in T lymphocytes remain largely unknown. Previous work from my laboratory has shown that T cells from GIMAP5-deficient rats show reduced influx of calcium (Ca[superscript 2+]) from the extracellular milieu following stimulation of the TCR complex. In this thesis, I characterized the mechanism by which GIMAP5 regulates Ca[superscript 2+] homeostasis, and elucidated the signaling pathways modulated by GIMAP5 to facilitate the survival of T cells. Firstly, I investigated if GIMAP5 prevents apoptotic death of T lymphocytes by affecting the Ca[superscript 2+] buffering capacity of mitochondria, which is required for sustained Ca[superscript 2+] influx via the plasma membrane channels. I observed that mitochondrial Ca[superscript 2+] accumulation following capacitative Ca[superscript 2+] entry is defective in T cells from Gimap5 deficient rats. Disruption of microtubules, but not the actin cytoskeleton, abrogated Ca[superscript 2+] sequestration by mitochondria in T cells from control but not Gimap5 deficient mice. Similarly, mice lacking functional GIMAP5 displayed defective T cell development and Ca[superscript 2+] influx. Furthermore, I observed that the proximal signaling events following TCR stimulation was reduced and was accompanied by defective proliferation in T cells from Gimap5 deficient mice. Additionally, IL-7-induced STAT5 phosphorylation was decreased in CD4[superscript +] T cells from Gimap5 deficient mice. I also showed that loss of functional Gimap5 results in increased basal activation of mammalian target of rapamycin (mTOR), independent of protein phosphatase 2A (PP2A) or AMP-activated protein kinase (AMPK). Instead, the constitutive activation the PI3K pathway contributed to the spontaneous high mTOR activation. Collectively, my observations suggest that the pro-survival function of GIMAP5 in T-lymphocytes may be linked to the regulation of diverse signaling pathways in a context dependent manner. GIMAP5 also facilitates microtubule-dependent mitochondrial buffering of Ca[superscript 2+] following capacitative entry. GIMAP5 is required to integrate the survival signals generated following activation through TCR and IL-7R. / Résumé : La survie à long terme des lymphocytes T en état de repos est essentielle pour maintenir leurs nombres dans les organes lymphoïdes secondaires. Le récepteur antigénique des cellules T (TCR) en contact avec les peptides du soi / CMH et en synergie avec l'IL-7 induit des signaux anti-apoptotiques pour favoriser la survie des cellules T. Ces stimuli extrinsèques sont également impliqués dans le métabolisme et la survie des cellules T grâce à la régulation de plusieurs voies de signalisation dont la voie phosphatidyl-inositol-3 kinase (PI3K) /AKT. Chez la souris et chez le rat, la perte de l’activité de GIMAP5 (GTPase of Immune Associated Nucleotide Binding Protein 5), provoque une lymphopénie T périphérique en raison de la mort spontanée des cellules T. Le mécanisme sous-jacent responsable de la fonction de survie de GIMAP5 dans les lymphocytes T reste largement inconnu. Nous avons observé que les cellules de rats déficients en GIMAP5, après stimulation par complexe TCR, montrent un afflux de calcium (Ca[indice supérieur 2+]) réduit provenant du milieu extracellulaire. Dans cette thèse, J’ai caractérisé le mécanisme d’action de GIMAP5 dans la régulation de l'homéostasie du Ca[indice supérieur 2+], ainsi que les voies de signalisation modulées par GIMAP5 pour faciliter la survie des cellules T. Tout d'abord, j’ai étudié si GIMAP5 empêche l’apoptose des lymphocytes T en affectant la capacité des mitochondries à réguler la concentration du Ca[indice supérieur 2+], ce qui est nécessaire pour soutenir l’influx de Ca[indice supérieur 2+]. J’ai trouvé que l’accumulation du Ca[indice supérieur 2+] mitochondrial après l’entrée capacitive de Ca[indice supérieur 2+] est défectueuse dans les cellules T de rat déficientes en Gimap5. La disruption des microtubules, mais pas du cytosquelette d'actine, abroge la séquestration du Ca[indice supérieur 2+] mitochondrial dans les cellules T primaires de rat, mais pas dans les cellules T déficientes en Gimap5. J’ai observé que les cellules T provenant de souris déficientes en Gimap5 démontrent une diminution de l’entrée de Ca[indice supérieur 2+]. De plus, la prolifération des cellules T déficientes en Gimap5 est diminuée suite à la stimulation du TCR. En outre, la phosphorylation de STAT5 induit par l'IL-7 est diminuée dans les cellules T CD4[indice supérieur +] de souris déficientes en Gimap5. Également, la perte de Gimap5 aboutit à une activation accrue de la cible mammalienne de la rapamycine (mTOR), indépendamment de la protéine phosphatase 2A (PP2A) ou de la protéine kinase activée par l'AMP (AMPK). Au lieu de cela, l'activation constitutive de la voie PI3K contribue à une forte activation spontanée de mTOR. Collectivement, la fonction de survie de GIMAP5 dans les lymphocytes T peut être liée à la régulation de différentes voies de signalisation. GIMAP5 facilite la fonction, microtubule dépendant, des mitochondries dans leurs actions de régulation du Ca[indice supérieur 2+] après l’entrée capacitive de Ca[indice supérieur 2+]. GIMAP5 est nécessaire pour intégrer les signaux de survie produits suite à l'activation du TCR et de l’IL-7R, qui pourrait être associée à la régulation de l'activité PI3K / AKT / mTOR.