11 |
Multimodal structural, compositional, and mechanical characterization of cortical bone on the micron scaleSchrof, Susanne 31 July 2017 (has links)
Schlüsselfaktoren der bemerkenswerten mechanischen Eigenschaften von Knochen sind seine
komplexe hierarchische Struktur und chemische Zusammensetzung. Ziel dieser Dissertation war die simultane Untersuchung von Materialkomposition und 3D Struktur in Relation zu lokalen elastischen Eigenschaften von Knochengewebe unter Verwendung von neuen hochauflösenden experimentellen Konzepten. Im ersten Teil wurde polarisierte Raman Spektroskopie (PRS) eingesetzt um gesunden humanen kortikalen Knochen zu analysieren. Es konnte gezeigt werden, dass sich PRS eignet, um sowohl die chemische Zusammensetzung als auch die 3D Organisation der Kollagenfasern in einer Messung aufzuklären. Dominante Faserorientierungen ganzer Gewebedomänen konnten identifiziert
und mit der Koexistenz zweier Faserorganisationsmuster verknüpft werden. Durch Kombination derPRS Experimente mit ko-lokalisierten Synchrotron-Phasenkontrast-Nano-Tomografie- undUltraschallmikroskopie-Messungen wurde eine komplementäre Untersuchung von Faserarchitektur, chemischer Komposition und elastischen Eigenschaften einzelner Knochenlamellen ermöglicht. Die multimodale Analyse ergab, dass die charakteristischen lamellären Ondulationen der Elastizität in erster Linie durch sich lokal ändernde Faserorientierungen bedingt werden und nicht durch Variationen der Materialzusammensetzung, Abweichungen der Mineralkristallpartikeleigenschaften
oder durch Fluktuationen der Massendichte. Im letzten Teil wurde mittels akustischer Mikroskopie der Einfluss der Mutation des Neurofibromin 1 Genes auf die pathologische Entwicklung von mechanischen Knocheneigenschaften untersucht. Anhand zweier Knockout-Mausmodelle wurde festgestellt, dass nur eine Mutation in frühen mesenchymalen Vorläuferzellen die Steifigkeit der langen Röhrenknochen signifikant beeinträchtigt. Perspektivisch eignet sich der vorgestellte multimodale Ansatz für nicht-destruktive Charakterisierung eines breiten Spektrums biologischer und synthetischer Faserverbundwerkstoffe. / Key factors determining the remarkable mechanical performance of bone are its material composition and complex hierarchically structure. The aim of this thesis was the concurrent investigation of the chemical composition and 3D structure of bone tissue in relation to the local elastic properties by introducing novel high resolution experimental approaches. In the first part, polarized Raman spectroscopy (PRS) was applied to analyze healthy human cortical bone. In particular, it was demonstrated that PRS can be employed to simultaneously investigate the chemical composition and the 3D organization of collagen fibrils in a single experiment. Predominant fibril orientations in entire tissue domains were identified and linked to the coexistence of two fibril organization patterns. To further extend the analysis, PRS experiments were combined with synchrotron X-ray phase contrast nano tomography and scanning acoustic microscopy measurements in a site-matched study design. This multimodal approach enabled complementary imaging of the fibrillar architecture, tissue composition and resulting elastic properties of single bone lamellae. In line with earlier studies, crosscorrelation analysis strongly suggested that the characteristic elastic undulations of bone lamellae are the result of the twisting fibrillar orientation, rather than compositional variations, modulations of the mineral particle maturity, or mass density fluctuations. Finally, acoustic microscopy was applied to analyze the impact of the neurofibromin 1 gene mutation on the pathologic development of the mechanical properties of bone. Analysis of two knock-out mouse models revealed that only Nf1 ablation in early mesenchymal progenitor cells significantly impairs the elastic stiffness of long bones. In future studies, the presented multimodal methodology can be translated for non-destructive and high resolution characterization of a broad range of biological and synthetic fiber composite materials.
|
12 |
The role of different modes of interactions among neighbouring plants in driving population dynamicsLin, Yue 18 February 2013 (has links) (PDF)
The general aim of my dissertation was to investigate the role of plant interactions in driving population dynamics. Both theoretical and empirical approaches were employed. All my studies were conducted on the basis of metabolic scaling theory (MST), because the complex, spatially and temporally varying structures and dynamics of ecological systems are considered to be largely consequences of biological metabolism. However, MST did not consider the important role of plant interactions and was found to be invalid in some environmental conditions. Integrating the effects of plant interactions and environmental conditions into MST may be essential for reconciling MST with observed variations in nature. Such integration will improve the development of theory, and will help us to understand the relationship between individual level process and system level dynamics.
As a first step, I derived a general ontogenetic growth model for plants which is based on energy conservation and physiological processes of individual plant. Taking the mechanistic growth model as basis, I developed three individual-based models (IBMs) to investigate different topics related to plant population dynamics:
1. I investigated the role of different modes of competition in altering the prediction of MST on plant self-thinning trajectories. A spatially-explicit individual-based zone-of-influence (ZOI) model was developed to investigate the hypothesis that MST may be compatible with the observed variation in plant self-thinning trajectories if different modes of competition and different resource availabilities are considered. The simulation results supported my hypothesis that (i) symmetric competition (e.g. belowground competition) will lead to significantly shallower self-thinning trajectories than asymmetric competition as predicted by MST; and (ii) individual-level metabolic processes can predict population-level patterns when surviving plants are barely affected by local competition, which is more likely to be in the case of asymmetric competition.
2. Recent studies implied that not only plant interactions but also the plastic biomass allocation to roots or shoots of plants may affect mass-density relationship. To investigate the relative roles of competition and plastic biomass allocation in altering the mass-density relationship of plant population, a two-layer ZOI model was used which considers allometric biomass allocation to shoots or roots and represents both above- and belowground competition simultaneously via independent ZOIs. In addition, I also performed greenhouse experiment to evaluate the model predictions. Both theoretical model and experiment demonstrated that: plants are able to adjust their biomass allocation in response to environmental factors, and such adaptive behaviours of individual plants, however, can alter the relative importance of above- or belowground competition, thereby affecting plant mass-density relationships at the population level. Invalid predictions of MST are likely to occur where competition occurs belowground (symmetric) rather than aboveground (asymmetric).
3. I introduced the new concept of modes of facilitation, i.e. symmetric versus asymmetric facilitation, and developed an individual-based model to explore how the interplay between different modes of competition and facilitation changes spatial pattern formation in plant populations. The study shows that facilitation by itself can play an important role in promoting plant aggregation independent of other ecological factors (e.g. seed dispersal, recruitment, and environmental heterogeneity).
In the last part of my study, I went from population level to community level and explored the possibility of combining MST and unified neutral theory of biodiversity (UNT). The analysis of extensive data confirms that most plant populations examined are nearly neutral in the sense of demographic trade-offs, which can mostly be explained by a simple allometric scaling rule based on MST. This demographic equivalence regarding birth-death trade-offs between different species and functional groups is consistent with the assumptions of neutral theory but allows functional differences between species. My initial study reconciles the debate about whether niche or neutral mechanisms structure natural communities: the real question should be when and why one of these factors dominates.
A synthesis of existing theories will strengthen future ecology in theory and application. All the studies presented in my dissertation showed that the approaches of individual-based and pattern-oriented modelling are promising to achieve the synthesis.
|
13 |
The role of different modes of interactions among neighbouring plants in driving population dynamicsLin, Yue 22 January 2013 (has links)
The general aim of my dissertation was to investigate the role of plant interactions in driving population dynamics. Both theoretical and empirical approaches were employed. All my studies were conducted on the basis of metabolic scaling theory (MST), because the complex, spatially and temporally varying structures and dynamics of ecological systems are considered to be largely consequences of biological metabolism. However, MST did not consider the important role of plant interactions and was found to be invalid in some environmental conditions. Integrating the effects of plant interactions and environmental conditions into MST may be essential for reconciling MST with observed variations in nature. Such integration will improve the development of theory, and will help us to understand the relationship between individual level process and system level dynamics.
As a first step, I derived a general ontogenetic growth model for plants which is based on energy conservation and physiological processes of individual plant. Taking the mechanistic growth model as basis, I developed three individual-based models (IBMs) to investigate different topics related to plant population dynamics:
1. I investigated the role of different modes of competition in altering the prediction of MST on plant self-thinning trajectories. A spatially-explicit individual-based zone-of-influence (ZOI) model was developed to investigate the hypothesis that MST may be compatible with the observed variation in plant self-thinning trajectories if different modes of competition and different resource availabilities are considered. The simulation results supported my hypothesis that (i) symmetric competition (e.g. belowground competition) will lead to significantly shallower self-thinning trajectories than asymmetric competition as predicted by MST; and (ii) individual-level metabolic processes can predict population-level patterns when surviving plants are barely affected by local competition, which is more likely to be in the case of asymmetric competition.
2. Recent studies implied that not only plant interactions but also the plastic biomass allocation to roots or shoots of plants may affect mass-density relationship. To investigate the relative roles of competition and plastic biomass allocation in altering the mass-density relationship of plant population, a two-layer ZOI model was used which considers allometric biomass allocation to shoots or roots and represents both above- and belowground competition simultaneously via independent ZOIs. In addition, I also performed greenhouse experiment to evaluate the model predictions. Both theoretical model and experiment demonstrated that: plants are able to adjust their biomass allocation in response to environmental factors, and such adaptive behaviours of individual plants, however, can alter the relative importance of above- or belowground competition, thereby affecting plant mass-density relationships at the population level. Invalid predictions of MST are likely to occur where competition occurs belowground (symmetric) rather than aboveground (asymmetric).
3. I introduced the new concept of modes of facilitation, i.e. symmetric versus asymmetric facilitation, and developed an individual-based model to explore how the interplay between different modes of competition and facilitation changes spatial pattern formation in plant populations. The study shows that facilitation by itself can play an important role in promoting plant aggregation independent of other ecological factors (e.g. seed dispersal, recruitment, and environmental heterogeneity).
In the last part of my study, I went from population level to community level and explored the possibility of combining MST and unified neutral theory of biodiversity (UNT). The analysis of extensive data confirms that most plant populations examined are nearly neutral in the sense of demographic trade-offs, which can mostly be explained by a simple allometric scaling rule based on MST. This demographic equivalence regarding birth-death trade-offs between different species and functional groups is consistent with the assumptions of neutral theory but allows functional differences between species. My initial study reconciles the debate about whether niche or neutral mechanisms structure natural communities: the real question should be when and why one of these factors dominates.
A synthesis of existing theories will strengthen future ecology in theory and application. All the studies presented in my dissertation showed that the approaches of individual-based and pattern-oriented modelling are promising to achieve the synthesis.
|
Page generated in 0.0271 seconds