Au cours de la dernière décennie, la pathologie numérique a été améliorée grâce aux avancées des algorithmes d'analyse d'images et de la puissance de calcul. Néanmoins, le diagnostic par un expert à partir d'images histopathologiques reste le gold standard pour un nombre considérable de maladies notamment le cancer. Ce type d'images préserve la structure des tissus aussi proches que possible de leur état vivant. Ainsi, cela permet de quantifier les objets biologiques et de décrire leur organisation spatiale afin de fournir une description plus précise des tissus malades. L'analyse automatique des images histopathologiques peut avoir trois objectifs: le diagnostic assisté par ordinateur, l'évaluation de la sévérité des maladies et enfin l'étude et l'interprétation des mécanismes sous-jacents des maladies et leurs impacts sur les objets biologiques. L'objectif principal de cette thèse est en premier lieu de comprendre et relever les défis associés à l'analyse automatisée des images histologiques. Ensuite, ces travaux visent à décrire les populations d'objets biologiques présents dans les images et leurs relations et interactions à l'aide des statistiques spatiales et également à évaluer la significativité de leurs différences en fonction de la maladie par des tests statistiques. Après une étape de séparation des populations d'objets biologiques basée sur la couleur des marqueurs, une extraction automatique de leurs emplacements est effectuée en fonction de leur type, qui peut être ponctuel ou surfacique. Les statistiques spatiales, basées sur la distance pour les données ponctuelles, sont étudiées et une fonction originale afin de mesurer les interactions entre deux types de données est proposée. Puisqu'il a été montré dans la littérature que la texture d'un tissu est altérée par la présence d'une maladie, les méthodes fondées sur les motifs binaires locaux sont discutées et une approche basée sur une modification de la résolution de l'image afin d'améliorer leur description est introduite. Enfin, les statistiques descriptives et déductives sont appliquées afin d'interpréter les caractéristiques extraites et d'étudier leur pouvoir discriminant dans le cadre de l'étude des modèles animaux de cancer colorectal. Ce travail préconise la mesure des associations entre différents types d'objets biologiques pour mieux comprendre et comparer les mécanismes sous-jacents des maladies et leurs impacts sur la structure des tissus. En outre, nos expériences confirment que l'information de texture joue un rôle important dans la différenciation des deux modèles d'implantation d'une même maladie. / During the last decade, digital pathology has been improved thanks to the advance of image analysis algorithms and calculus power. However, the diagnosis from histopathology images by an expert remains the gold standard in a considerable number of diseases especially cancer. This type of images preserves the tissue structures as close as possible to their living state. Thus, it allows to quantify the biological objects and to describe their spatial organization in order to provide a more specific characterization of diseased tissues. The automated analysis of histopathological images can have three objectives: computer-aided diagnosis, disease grading, and the study and interpretation of the underlying disease mechanisms and their impact on biological objects. The main goal of this dissertation is first to understand and address the challenges associated with the automated analysis of histology images. Then it aims at describing the populations of biological objects present in histology images and their relationships using spatial statistics and also at assessing the significance of their differences according to the disease through statistical tests. After a color-based separation of the biological object populations, an automated extraction of their locations is performed according to their types, which can be point or areal data. Distance-based spatial statistics for point data are reviewed and an original function to measure the interactions between point and areal data is proposed. Since it has been shown that the tissue texture is altered by the presence of a disease, local binary patterns methods are discussed and an approach based on a modification of the image resolution to enhance their description is introduced. Finally, descriptive and inferential statistics are applied in order to interpret the extracted features and to study their discriminative power in the application context of animal models of colorectal cancer. This work advocates the measure of associations between different types of biological objects to better understand and compare the underlying mechanisms of diseases and their impact on the tissue structure. Besides, our experiments confirm that the texture information plays an important part in the differentiation of two implemented models of the same disease.

This thesis presents a body of work on the theme of millimetre-wave FMCW radar, for the purposes of security screening and remote sensing. First, the development of an optimised software radar signal processor will be outlined. Through use of threading and GPU acceleration, high data processing rates were achieved using standard PC hardware. The flexibility of this approach, compared to specialised hardware (e.g. DSP, FPGA etc…), allowed the processor to be rapidly adapted and has produced a significant performance increase in a number of advanced real-time radar systems. An efficient tracker was developed and was successfully deployed in live trials for the purpose of real-time wave detection in an autonomous boat control system. Automated radar operation and remote data telemetry functions were implemented in a terrain mapping radar to allow continuous monitoring of the Soufrière Hills volcano on the Caribbean island of Montserrat. This work concluded with the installation of the system 3 km from the volcano. Hardware modifications were made to enable coherent measurement in a number of existing radar systems, allowing phase sensitive measurements, including range-Doppler, to be performed. Sensitivity to displacements of less than 200 nm was demonstrated, which is limited by the phase noise of the system. Efficient compensation techniques are presented which correct for quadrature mixer imbalance, FMCW chirp non-linearity, and scanner drive distortions. In collaboration with the Home Office, two radar systems were evaluated for the stand-off detection of concealed objects. Automatic detection capability, based on polarimetric signatures, was developed using data gathered under controlled conditions. Algorithm performance was assessed through blind testing across a statistically significant number of subjects. A detailed analysis is presented, which evaluates the effect of clothing and object type on detection efficiency.

Given satellite images with accompanying pixel classifications and elevation data, we propose different solutions to object detection. The first method uses hierarchical clustering for segmentation and then employs different methods of classification. One of these classification methods used domain knowledge to classify objects while the other used Support Vector Machines. Additionally, a combination of three Support Vector Machines were used in a hierarchical structure which out-performed the regular Support Vector Machine method in most of the evaluation metrics. The second approach is more conventional with different types of Convolutional Neural Networks. A segmentation network was used as well as a few detection networks and different fusions between these. The Convolutional Neural Network approach proved to be the better of the two in terms of precision and recall but the clustering approach was not far behind. This work was done using a relatively small amount of data which potentially could have impacted the results of the Machine Learning models in a negative way.

Die Objekterkennung ist ein natürlicher Prozess im Menschlichen Gehirn. Sie ndet im visuellen Kortex statt und nutzt die binokulare Eigenschaft der Augen, die eine drei- dimensionale Interpretation von Objekten in einer Szene erlaubt. Kameras ahmen das menschliche Auge nach. Bilder von zwei Kameras, in einem Stereokamerasystem, werden von Algorithmen für eine automatische, dreidimensionale Interpretation von Objekten in einer Szene benutzt. Die Entwicklung von Hard- und Software verbessern den maschinellen Prozess der Objek- terkennung und erreicht qualitativ immer mehr die Fähigkeiten des menschlichen Gehirns. Das Hauptziel dieses Forschungsfeldes ist die Entwicklung von robusten Algorithmen für die Szeneninterpretation. Sehr viel Aufwand wurde in den letzten Jahren in der zweidimen- sionale Objekterkennung betrieben, im Gegensatz zur Forschung zur dreidimensionalen Erkennung. Im Rahmen dieser Arbeit soll demnach die dreidimensionale Objekterkennung weiterent- wickelt werden: hin zu einer besseren Interpretation und einem besseren Verstehen von sichtbarer Realität wie auch der Beziehung zwischen Objekten in einer Szene. In den letzten Jahren aufkommende low-cost Verbrauchersensoren, wie die Microsoft Kinect, generieren Farb- und Tiefendaten einer Szene, um menschenähnliche visuelle Daten zu generieren. Das Ziel hier ist zu zeigen, wie diese Daten benutzt werden können, um eine neue Klasse von dreidimensionalen Objekterkennungsalgorithmen zu entwickeln - analog zur Verarbeitung im menschlichen Gehirn. / Object recognition is a natural process of the human brain performed in the visual cor- tex and relies on a binocular depth perception system that renders a three-dimensional representation of the objects in a scene. Hitherto, computer and software systems are been used to simulate the perception of three-dimensional environments with the aid of sensors to capture real-time images. In the process, such images are used as input data for further analysis and development of algorithms, an essential ingredient for simulating the complexity of human vision, so as to achieve scene interpretation for object recognition, similar to the way the human brain perceives it. The rapid pace of technological advancements in hardware and software, are continuously bringing the machine-based process for object recognition nearer to the inhuman vision prototype. The key in this eld, is the development of algorithms in order to achieve robust scene interpretation. A lot of recognisable and signi cant e ort has been successfully carried out over the years in 2D object recognition, as opposed to 3D. It is therefore, within this context and scope of this dissertation, to contribute towards the enhancement of 3D object recognition; a better interpretation and understanding of reality and the relationship between objects in a scene. Through the use and application of low-cost commodity sensors, such as Microsoft Kinect, RGB and depth data of a scene have been retrieved and manipulated in order to generate human-like visual perception data. The goal herein is to show how RGB and depth information can be utilised in order to develop a new class of 3D object recognition algorithms, analogous to the perception processed by the human brain.

This thesis addresses a challenging problem: “how to let the visually impaired ‘see’ others emotions”. We, human beings, are heavily dependent on facial expressions to express ourselves. A smile shows that the person you are talking to is pleased, amused, relieved etc. People use emotional information from facial expressions to switch between conversation topics and to determine attitudes of individuals. Missing emotional information from facial expressions and head gestures makes the visually impaired extremely difficult to interact with others in social events. To enhance the visually impaired’s social interactive ability, in this thesis we have been working on the scientific topic of ‘expressing human emotions through vibrotactile patterns’. It is quite challenging to deliver human emotions through touch since our touch channel is very limited. We first investigated how to render emotions through a vibrator. We developed a real time “lipless” tracking system to extract dynamic emotions from the mouth and employed mobile phones as a platform for the visually impaired to perceive primary emotion types. Later on, we extended the system to render more general dynamic media signals: for example, render live football games through vibration in the mobile for improving mobile user communication and entertainment experience. To display more natural emotions (i.e. emotion type plus emotion intensity), we developed the technology to enable the visually impaired to directly interpret human emotions. This was achieved by use of machine vision techniques and vibrotactile display. The display is comprised of a ‘vibration actuators matrix’ mounted on the back of a chair and the actuators are sequentially activated to provide dynamic emotional information. The research focus has been on finding a global, analytical, and semantic representation for facial expressions to replace state of the art facial action coding systems (FACS) approach. We proposed to use the manifold of facial expressions to characterize dynamic emotions. The basic emotional expressions with increasing intensity become curves on the manifold extended from the center. The blends of emotions lie between those curves, which could be defined analytically by the positions of the main curves. The manifold is the “Braille Code” of emotions. The developed methodology and technology has been extended for building assistive wheelchair systems to aid a specific group of disabled people, cerebral palsy or stroke patients (i.e. lacking fine motor control skills), who don’t have ability to access and control the wheelchair with conventional means, such as joystick or chin stick. The solution is to extract the manifold of the head or the tongue gestures for controlling the wheelchair. The manifold is rendered by a 2D vibration array to provide user of the wheelchair with action information from gestures and system status information, which is very important in enhancing usability of such an assistive system. Current research work not only provides a foundation stone for vibrotactile rendering system based on object localization but also a concrete step to a new dimension of human-machine interaction. / Taktil Video

Au cours de la dernière décennie, la pathologie numérique a été améliorée grâce aux avancées des algorithmes d'analyse d'images et de la puissance de calcul. Néanmoins, le diagnostic par un expert à partir d'images histopathologiques reste le gold standard pour un nombre considérable de maladies notamment le cancer. Ce type d'images préserve la structure des tissus aussi proches que possible de leur état vivant. Ainsi, cela permet de quantifier les objets biologiques et de décrire leur organisation spatiale afin de fournir une description plus précise des tissus malades. L'analyse automatique des images histopathologiques peut avoir trois objectifs: le diagnostic assisté par ordinateur, l'évaluation de la sévérité des maladies et enfin l'étude et l'interprétation des mécanismes sous-jacents des maladies et leurs impacts sur les objets biologiques. L'objectif principal de cette thèse est en premier lieu de comprendre et relever les défis associés à l'analyse automatisée des images histologiques. Ensuite, ces travaux visent à décrire les populations d'objets biologiques présents dans les images et leurs relations et interactions à l'aide des statistiques spatiales et également à évaluer la significativité de leurs différences en fonction de la maladie par des tests statistiques. Après une étape de séparation des populations d'objets biologiques basée sur la couleur des marqueurs, une extraction automatique de leurs emplacements est effectuée en fonction de leur type, qui peut être ponctuel ou surfacique. Les statistiques spatiales, basées sur la distance pour les données ponctuelles, sont étudiées et une fonction originale afin de mesurer les interactions entre deux types de données est proposée. Puisqu'il a été montré dans la littérature que la texture d'un tissu est altérée par la présence d'une maladie, les méthodes fondées sur les motifs binaires locaux sont discutées et une approche basée sur une modification de la résolution de l'image afin d'améliorer leur description est introduite. Enfin, les statistiques descriptives et déductives sont appliquées afin d'interpréter les caractéristiques extraites et d'étudier leur pouvoir discriminant dans le cadre de l'étude des modèles animaux de cancer colorectal. Ce travail préconise la mesure des associations entre différents types d'objets biologiques pour mieux comprendre et comparer les mécanismes sous-jacents des maladies et leurs impacts sur la structure des tissus. En outre, nos expériences confirment que l'information de texture joue un rôle important dans la différenciation des deux modèles d'implantation d'une même maladie. / During the last decade, digital pathology has been improved thanks to the advance of image analysis algorithms and calculus power. However, the diagnosis from histopathology images by an expert remains the gold standard in a considerable number of diseases especially cancer. This type of images preserves the tissue structures as close as possible to their living state. Thus, it allows to quantify the biological objects and to describe their spatial organization in order to provide a more specific characterization of diseased tissues. The automated analysis of histopathological images can have three objectives: computer-aided diagnosis, disease grading, and the study and interpretation of the underlying disease mechanisms and their impact on biological objects. The main goal of this dissertation is first to understand and address the challenges associated with the automated analysis of histology images. Then it aims at describing the populations of biological objects present in histology images and their relationships using spatial statistics and also at assessing the significance of their differences according to the disease through statistical tests. After a color-based separation of the biological object populations, an automated extraction of their locations is performed according to their types, which can be point or areal data. Distance-based spatial statistics for point data are reviewed and an original function to measure the interactions between point and areal data is proposed. Since it has been shown that the tissue texture is altered by the presence of a disease, local binary patterns methods are discussed and an approach based on a modification of the image resolution to enhance their description is introduced. Finally, descriptive and inferential statistics are applied in order to interpret the extracted features and to study their discriminative power in the application context of animal models of colorectal cancer. This work advocates the measure of associations between different types of biological objects to better understand and compare the underlying mechanisms of diseases and their impact on the tissue structure. Besides, our experiments confirm that the texture information plays an important part in the differentiation of two implemented models of the same disease.

Virtual reconstruction of historic sites, planning of restorations and attachments of new building parts, as well as forest inventory are few examples of fields that benefit from the application of 3D surveying data. Originally using 2D photo based documentation and manual distance measurements, the 3D information obtained from multi camera and laser scanning systems realizes a noticeable improvement regarding the surveying times and the amount of generated 3D information. The 3D data allows a detailed post processing and better visualization of all relevant spatial information. Yet, for the extraction of the required information from the raw scan data and for the generation of useable visual output, time-consuming, complex user-based data processing is still required, using the commercially available 3D software tools. In this context, the automatic object recognition from 3D point cloud and depth data has been discussed in many different works. The developed tools and methods however, usually only focus on a certain kind of object or the detection of learned invariant surface shapes. Although the resulting methods are applicable for certain practices of data segmentation, they are not necessarily suitable for arbitrary tasks due to the varying requirements of the different fields of research. This thesis presents a more widespread solution for automatic scene reconstruction from 3D point clouds, targeting street scenarios, specifically for the task of traffic accident scene analysis and documentation. The data, obtained by sampling the scene using a mobile scanning system is evaluated, segmented, and finally used to generate detailed 3D information of the scanned environment. To realize this aim, this work adapts and validates various existing approaches on laser scan segmentation regarding the application on accident relevant scene information, including road surfaces and markings, vehicles, walls, trees and other salient objects. The approaches are therefore evaluated regarding their suitability and limitations for the given tasks, as well as for possibilities concerning the combined application together with other procedures. The obtained knowledge is used for the development of new algorithms and procedures to allow a satisfying segmentation and reconstruction of the scene, corresponding to the available sampling densities and precisions. Besides the segmentation of the point cloud data, this thesis presents different visualization and reconstruction methods to achieve a wider range of possible applications of the developed system for data export and utilization in different third party software tools.

This thesis describes a process of creating a mobile application using deep convolutional neural networks. The process starts with proposal of the main idea, followed by product and technical design, implementation and evaluation. The thesis also explores the technical background of image recognition, and chooses the most suitable options for the purpose of the application. These are object detection and multi-label classification, which are both implemented, evaluated and compared. The resulting application tries to bring value from both user and technical point of view.

The main goal of this work is creating client-server application with image processing and cryptographic verification of image source and creation time. The work focuses on creating a mobile client application on the Android platform that securly takes photos by mobile device camera, processes captured images and provides a digital signature, timestamp and GPS location. The main part of the work is secure key exchange, encrypted communication, data and energy efficiency of the client-server application. The server application is implemented on the Java EE platform and processes the received image, performs object detection, object recognition in the image and provides a timestamp from a trusted server. Then taken photo can be considered as a trusted electronic document usable as valid evidence for the judical or administrative proceedings.

The thesis focuses on modern methods of traffic sign detection and traffic lights detection directly in traffic and with use of back analysis. The main subject is convolutional neural networks (CNN). The solution is using convolutional neural networks of YOLO type. The main goal of this thesis is to achieve the greatest possible optimization of speed and accuracy of models. Examines suitable datasets. A number of datasets are used for training and testing. These are composed of real and synthetic data sets. For training and testing, the data were preprocessed using the Yolo mark tool. The training of the model was carried out at a computer center belonging to the virtual organization MetaCentrum VO. Due to the quantifiable evaluation of the detector quality, a program was created statistically and graphically showing its success with use of ROC curve and evaluation protocol COCO. In this thesis I created a model that achieved a success average rate of up to 81 %. The thesis shows the best choice of threshold across versions, sizes and IoU. Extension for mobile phones in TensorFlow Lite and Flutter have also been created.