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In this doctoral thesis, we theoretically investigate the propagation of sound waves in dilute Bose gases, in both the collisionless and hydrodynamic regimes. The study of sound wave is a topic of high relevance for the understanding of dynamical properties of any fluid, classical or quantum, and further provides insightful information about the equation of state of the system. In our work, we focus in particular on the two-dimensional (2D) Bose gas, in which the sound wave is predicted to give useful information about the nature of the superfluid phase transition. Recently, experimental measurement of sound wave in a uniform 2D Bose gas has become available, and we show that the measured data are quantitatively well explained by our collisionless theory. Finally, we study the mixtures of weakly interacting Bose gases, by developing a beyond mean-field theory, which includes the effects of thermal and quantum fluctuations in both the density and spin channels. Our new theory allows for the investigation of sound dynamics, as well as the fundamental problem of phase- separation.

Magnetic nanoparticles that display high saturation magnetization and high magnetic susceptibility are of great interest for medical applications. Nanomagnetite is particularly desirable because it displays strong ferrimagnetic behavior, and is less sensitive to oxidation than magnetic transition metals such as cobalt, iron, and nickel. Magnetite nanoparticles can be prepared by co-precipitating iron (II) and iron (III) chloride salts in the presence of ammonium hydroxide at pH 9-10. One goal of this work has been to develop a generalized methodology for stabilizing nanomagnetite dispersions using well-defined, non-toxic, block copolymers, so that the resultant magnetite-polymer complexes can be used in a range of biomedical materials. Hydrophilic triblock copolymers with controlled concentrations of pendent carboxylic acids were prepared. The triblock copolymers contain carboxylic acids in the central urethane segments and controlled molecular weight poly(ethylene oxide) tail blocks. They were utilized to prepare hydrophilic-coated iron oxide nanoparticles with biocompatible materials for utility in magnetic field guidable drug delivery vehicles. The triblock copolymers synthesized contain 3, 5, or 10 carboxylic acids in the central segments with Mn values of 2000, 5000 or 15000 g/mol poly(ethylene oxide) tail blocks. A method was developed for preparing ~10 nm diameter magnetite surfaces stabilized with the triblock polymers. The carboxylic acid is proposed to covalently bind to the surface of the magnetite and form stable dispersions at neutral pH. The polymer-nanomagnetite conjugates described in this thesis have a maximum of 35 wt. % magnetite and the nano-magnetite particles have an excellent saturation magnetization of ~66 - 78 emu/g Fe3O4. Powder X-ray diffraction (XRD) confirms the magnetite crystal structure, which appears to be approximately single crystalline structures via electron diffraction spectroscopy analysis (EDS). These materials form stable magnetic dispersions in both water and organic solvents. / Ph. D.

Poly(phenylene sulfide) (PPS), an engineering thermoplastic with excellent mechanical, thermal, and chemical properties, was gelled for the first time using 1,3-diphenylacetone (DPA) as the gelation solvent in a thermally induced phase separation (TIPS) process. PPS was dissolved in DPA at high temperatures to form a homogeneous solution. The solution was cooled, initiating phase separation and eventually forming a solidified PPS network around DPA-rich domains. Evacuation of DPA from the gel network creates monolithic PPS aerogels, one of few physically crosslinked polymer aerogel systems comprised of a high-performance thermoplastic. In this work, specific properties of PPS aerogels were controlled through the manipulation of various processing parameters, such as polymer concentration, post-process annealing conditions, mode of manufacturing (casting versus additive manufacturing), dissolution temperature, and drying method. The ultimate goal was to elucidate key process-morphology-property relationships in PPS aerogels, to ultimately improve aerogel performance and applicability. The phase diagram of PPS/DPA was first elucidated to determine the phase separation mechanism of the system, which guides all future processing decisions. The phase diagram indicated that the system undergoes solid-liquid phase separation, typical for solutions with relatively favorable polymer-solvent interactions. This assignment was validated by the calculation of the Flory-Huggins interaction parameter through two independent methods - Hansen solubility parameters and fitting melting point depression data. The influence of polymer composition on PPS aerogel properties was then characterized. As polymer concentration increased, aerogel density and mechanical properties increases, and porosity decreased. The particular morphology of PPS aerogels from DPA was that of a fibrillar network, where these axialitic (pre-spherulitic) fibrils are comprised of stacks of PPS crystalline lamellae, as suggested by x-ray scattering and electron microscopy. These interconnected microstructures responded more favorably to compressive load than similar globular PEEK aerogels, highlighting the importance of aerogel microstructure on its mechanical response. Upon solvent extraction, PPS aerogels were annealed in air environments to improve their mechanical behavior. Annealing did not dramatically shrink the aerogels, nor did it appear to affect the micron-scale morphology of PPS aerogels as observed by electron microscopy. The resistance to densification of PPS aerogels was mainly a product of their interconnected fibrillar morphologies, aided by subtle microstructural changes that occurred upon annealing. Exposure to a high temperature oxidative environment (160 – 240 oC) increased the degree of crystallinity of the aerogels, and also promoted chemical crosslinking within the amorphous PPS regions, both of which may have helped to prevent severe densification. With enhanced physical and chemical crosslinking, annealed PPS aerogels displayed improved compressive properties over unannealed analogues. Additionally, the thermal conductivity of both annealed and unannealed aerogel specimens was below that of air (~ 0.026 W/mK) and did not display a dependence on polymer composition nor on annealing condition. Generally, these experiments demonstrate that annealing PPS aerogels improved their mechanical performance without negatively affecting their inherent fibrillar morphology, low density, or low thermal conductivity. To fabricate aerogels with geometric flexibility and hierarchical porosity, PPS/DPA solutions were printed through material extrusion (MEX) and TIPS using a custom-built heated extruder. In this process, solid solvated gels were first re-dissolved in a heated extruder and solutions were deposited in a layer-wise fashion onto a room-temperature substrate. The large temperature gradient between nozzle and substrate rapidly initiated phase separation, solidified the deposited layers and formed a printed part. Subsequent solvent exchange and drying created printed PPS aerogels. The morphology of printed aerogels was compositionally-dependent, where the high extrusion temperature required to dissolve highly-concentrated inks (50 wt % PPS) also destroyed self-nuclei in solution, yielding printed aerogels with spherulitic microstructures. In contrast, aerogels printed from 30 wt % solutions were deposited at lower temperatures and demonstrated fibrillar microstructures, similar to those observed in 30 wt % cast aerogel analogues. Despite these microstructural differences, all printed aerogels demonstrated densities, porosities, and crystallinities similar to their cast aerogel counterparts. However, printed aerogel mechanical properties were microstructurally-dependent, and the spherulitic 50 wt % aerogels were much more brittle compared to the fibrillar cast 50 wt % analogues. This work introduces a widely-applicable framework for printing polymer aerogels using MEX and TIPS. Intrigued by the compositional morphological dependence of the printed PPS aerogels, the dissolution temperature (Tdis), and thus the self-nuclei content, of cast PPS/DPA solutions was systematically varied to understand its influence on aerogel morphology and properties. As Tdis increased, the length and diameter of axialites increased while aerogel density and porosity were relatively unaffected. Thus, the isolated influence of axialite dimensions (analogous to pore size and pore concentration) on aerogel properties could be studied independent of density. At low relative densities (below 0.3, aerogels of 10 – 30 wt %), compressive modulus and offset yield strength tended to decrease with Tdis, due to an increase in axialite length (akin to pore size) and number of axialites (akin to number of pores). At higher relative densities (above 0.3, 40 and 50 wt %), axialitic aerogels were so dense that changes in pore dimensions did not result in systematic changes in mechanical response. All spherulitic aerogels fabricated at the highest Tdis¬ demonstrated reduced mechanical properties due to poor interspherulitic connectivity. The thermal conductivity of all aerogels increased with polymer composition but demonstrated no clear trend with Tdis. A model for thermal conductivity was used to deconvolute calculated conductivity into solid, gaseous, and radiative components to help rationalize the measured conductivity data. This work demonstrates the importance of nucleation density control in TIPS aerogel fabrication, especially at low polymer concentrations. The specific method used to dry an aerogel generally has a great influence on its microstructure and density. Vacuum or ambient drying is the most industrially-attractive technique due to low cost and low energy usage; however, it is typically the most destructive process due to high capillary forces acting on the delicate aerogel microstructure. Three drying methods, vacuum drying, freeze drying, and supercritical CO2 drying, were used to evacuate PPS gels fabricated at three PPS concentrations (10, 15, and 20 wt %). Almost all aerogel specimens displayed excellent resilience against shrinkage as a function of the drying method, besides the 10 wt % vacuum dried sample which shrunk almost 40%. While the micron-scale aerogel morphology captured by electron microscopy appeared to be unaffected by the drying method, other properties such as aerogel surface area, mesoporous volume, and mechanical properties were effectively functions of the degree of aerogel shrinkage. Aerogel thermal conductivity was low for all samples, and in particular, vacuum dried aerogels demonstrated slightly lower conductivities than other ambiently-dried aerogel systems such as silica and carbon. In general, vacuum drying appears to be industrially viable for PPS aerogels at concentrations above 10 wt %. / Doctor of Philosophy / Polymer aerogels are nanoporous solid networks of low density. These materials are used in applications such as thermal insulation, absorbance/filtration, drug delivery, biomedical scaffolds, solid state batteries, and others. One method of creating polymeric aerogels is through thermally induced phase separation (TIPS), where a polymer is first dissolved in a high boiling point solvent at a high temperature. Next, the solution is cooled, inducing phase separation and gelation. Extraction of the gelation solvent transforms the solvated gel into an aerogel. To create polymeric aerogels with good properties and wide-ranging applicability, one should use a high-performance polymer. In this work, aerogels are for the first time made from poly(phenylene sulfide) (PPS), an engineering thermoplastic with good mechanical properties, thermal stability, and chemical resistance. PPS aerogels are fabricated using TIPS over a wide compositional range, and their microstructures, physical properties, thermal properties, and compressive properties are fully characterized. To further enhance aerogel performance, the fabrication process can be optimized to precisely control the aerogel morphology and thus the resulting properties. The influence of processing variables such as the polymer concentration, the post-fabrication aerogel annealing conditions, the method of manufacturing (traditional casting versus additive manufacturing), the dissolution temperature (temperature at which the polymer dissolves in solution prior to gelation), and the drying method on the aerogel behavior is investigated. Generally, results suggest that understanding critical process-morphology-property relationships allows for precise control over the nature of PPS aerogels.

Recently, there has been a growing drive towards the bottom-up development of synthetic cells that mimic key cellular features. A cellular feature ubiquitous amongst cells is that of compartmentalisation. Compartmentalisation enables the spatiotemporal control of biochemical reactions and is thus vital for the development of synthetic cells. To date, most synthetic cell models have utilised classical membrane bound containers as model compartments. However, recent advances in cell biology have highlighted the importance of membraneless compartments formed via liquid-liquid phase separation (LLPS) as organisation centres. It has been suggested that these organelles play a critical role in regulating cell biochemistry, yet very little is known about their interactions with enzymatic reactions. Thus, aiming to develop novel synthetic capabilities, the work presented in this thesis designs and characterises synthetic cells which include features of membraneless compartmentalisation. These systems utilise complex coacervates, a specific type of LLPS that is driven by the electrostatic attraction of oppositely charged polymers, as model membraneless compartments. These low complexity systems subsequently provide ideal platforms for systematic investigations of the interaction of membraneless coacervate compartments with enzymatic reactions. In Chapter 3 and 4, I focus on developing a responsive synthetic cell system that recapitulates features of membrane-bound and membraneless compartmentalisation. I generate a pH-responsive system by exploiting the intrinsic pKa of cationic polylysine to trigger coacervation within a liposome. This synthetic cell is then functionalised with the enzyme formate dehydrogenase (FDH). I show that coacervate properties can be utilized to locally concentrate and activate the FDH reaction at low enzyme concentrations, thus demonstrating that membraneless compartments can activate reactions via sequestration into coacervate reaction centres. In Chapter 5, I then proceed to characterise whether the diffusive exchange of molecules across a droplet phase boundary effects enzyme dynamics. Synthetic cells constructed from emulsion droplets with coacervate sub-compartments were used as model systems with diffusive exchange, while bulk coacervate and supernatant phases were used as uncoupled model systems without exchange. I studied the FDH reaction in both models and I conclude that coupling of the phases increases reaction rates compared to an uncoupled system. When coupled, the supernatant acts as a ’sink’ removing the product NADH from the coacervate droplets. This increases the apparent reaction rate in the supernatant, while the reduction of NADH concentration in the coacervate reduces product inhibition. This demonstrated that the open phase boundary tightly couples membraneless droplets to their surroundings, which can ultimately lead to increased reaction rates both inside and outside the compartments. Finally in Chapter 6, I scrutinize enzyme kinetics of the enzymes FDH and β -galactosidase in the unique coacervate physicochemical environment using Michaelis-Menten assays in CM-Dex/PDDA bulk phase. Results show that the KM and Vmax of FDH significantly increased compared to buffer, while those of β-galactosidase do not. I hypothesise that the negatively charged formate substrate of the FDH reaction interacts strongly with the positively charged PDDA, decreasing its affinity for the enzyme. Furthermore, I suggest that the coacervate environment facilitates the rate limiting hydride transfer of the reaction, thereby increasing the maximum rate. This data demonstrates that the coacervate environment itself can tune and control enzyme dynamics. In conclusion, my work establishes responsive, tunable and enzymatically active syn- thetic cellular systems with features of membraneless compartmentalisation. My results indicate that membraneless compartments can have significant impact on the dynamics of enzymatic reactions, opening up possible ways to control reaction rates in synthetic systems and suggesting plausible functions for membraneless organelles in vivo. Overall, I demonstrate that rationally designed synthetic cells provide biomimetic experimental platforms that offer insights into the influence of membraneless compartmentalisation on enzymatic reactions. Parts of the presented work have been published as two first author publications in peer-reviewed journals. / ‘Bottom-up'’ Modelle synthetischer Zellen, die Schlüsselmerkmale zellbasierten Lebens imitieren, rücken immer mehr in den Fokus. Von zentraler Bedeutung ist hier die Kompartmentbildung. Sie erst ermöglicht die räumliche und zeitliche Kontrolle biochemischer Abläufe und ist daher entscheidend bei der Entwicklung synthetischer Zellen. Bisher wurden in der Mehrzahl der synthetischen Zellmodelle klassische, membrangebundene Reaktionsräume als Modellkompartimente verwendet. Jüngste Fortschritte in der Zellbiologie belegen jedoch die Bedeutung von membranlosen Kompartimenten, die durch Flüssig-Flüssig-Phasentrennung (LLPS) gebildet werden. Es wird angenommen, dass diese membranlosen Kompartimente eine zentrale Rolle bei der Regulierung der Zellchemie spielen. Jedoch ist bisher nur sehr wenig über ihren Einfluss auf enzymatische Reaktionen bekannt und experimentell belegt. Mit dem Ziel, die Bandbreite und das Verständnis synthetischer Modelle zu erweitern, wurden in dieser Arbeit neue Methoden entwickelt und dargestellt, die membranlose Kompartmentbildung benutzen. Es wurden hierfür komplexe Koazervate eingesetzt, eine spezielle Art der LLPS, welche durch die elektrostatische Anziehung von entgegengesetzt geladenen Polymeren angetrieben wird. Diese verhältnismäßig einfachen Systeme bieten eine ideale Plattform für systematische Untersuchungen des Einflusses von membranlosen Koazervatkompartimenten auf enzymatische Reaktionen. In den Kapiteln 3 und 4 konzentrierte ich mich auf die Entwicklung eines reaktionsfähigen synthetischen Modellsystems, das die Phänomene sowohl membrangebundener als auch membranfreier Kompartmentbildung vereint. Zur Steuerung der Koazervierung innerhalb von Liposomen wurde ein pH-reaktives System verwendet, welches sich den intrinsischen pKa von kationischen Polylysin zunutze macht. Diese synthetis- che Zelle wurde im folgenden Schritt mit dem Enzym Formiat-Dehydrogenase (FDH) funktionalisiert. Ich konnte damit zeigen, dass es die Eigenschaften von Koazervaten ermöglichen, die FDH-Reaktion bei global sehr niedrigen Enzymkonzentrationen zu aktivieren. Hierbei wirken die membranlosen Koazervate in Folge einer lokal er- höhten Enzymkonzentration als Zentren gesteigerter Reaktivität. Dies geschieht durch die lokale Konzentrationserhöhung in Koazervaten, was bei LLPS auch durch den Verteilungskoeffizient beschrieben wird. Mit anderen Worten agieren diese membran- losen Kompartimente durch Sequestrierung als Reaktionszentren. Im Kapitel 5 charakterisierte ich den Einfluss von diffusivem Molekülaustausch auf die Enzymkinetik über die Koazervat-Phasengrenze hinweg. Hierbei wurden zwei Systeme miteinander verglichen. Einerseits wurde ein synthetisches Zellmodell, beste- hend aus mikrofluidisch hergestellten Wasser-in-Öl Emulsionstropfen, die Koazervate enthalten, als Modellsystem mit diffusivem Austausch zwischen den Phasen verwendet. Andererseits wurden separate, reine Koazervatphasen und reine Überstandsphasen als Modellsysteme ohne Austausch verwendet. Ich habe die FDH-Reaktion in beiden Modellsystemen untersucht und kam zu dem Schluss, dass die Kopplung der Phasen die Reaktionsgeschwindigkeiten im Vergleich zu den ungekoppelten Systemen erhöht. Bei der Kopplung wirkt die Überstandsphase als Senke, die das Produkt NADH aus den Koazervaten aufnimmt. Dies erhöht die scheinbare Reaktionsgeschwindigkeit im Überstand, während die Verringerung der NADH-Konzentration im Koazervat die Produkthemmung verringert. Dies zeigt, dass die offene Phasengrenze membranloser Kompartimente eng mit ihrer Umgebung gekoppelt ist, was als erhöhte Reaktionsraten sowohl innerhalb als auch außerhalb der Kompartimente gemessen werden kann. Schließlich untersuchte ich in Kapitel 6 die Enzymkinetik der Enzyme FDH und β- Galaktosidase in der physikalisch-chemischen Umgebung des Koazervats. Mit Hilfe von Michaelis-Menten-Experimenten in der CM-Dextran/PDDA-Bulkphase konnte gezeigt werden, dass KM und Vmax von FDH im Vergleich zum Überstand signifikant erhöht sind, wohingegen jene von β-Galaktosidase ein solches Verhalten nicht zeigen. Das führte mich zu der Hypothese, dass das negativ geladene Formiatsubstrat der FDH- Reaktion stark mit dem positiv geladenen PDDA interagiert, wodurch seine Affinität für das Enzym abnimmt. Darüber hinaus wird der ratenbegrenzende Hydridtransfer in der Umgebung des Koazervats erleichtert und es kann eine Erhöhung der Reaktionsrate beobachtet werden. Die Daten zeigen, dass abhängig vom Koazervat-Milieu die Enzymdynamik in verschiedene Richtungen gesteuert werden kann. Zusammenfassend lässt sich sagen, dass meine Arbeit reaktionsfähige, steuerbare und enzymatisch aktive synthetische Zellsysteme mit Eigenschaften membranloser Kompartmentbildung etabliert. Meine Ergebnisse deuten darauf hin, dass membranlose Kompartimente einen signifikanten Einfluss auf die Dynamik enzymatischer Reaktio- nen haben. Meine Untersuchungen eröffnen damit neuartige Wege zur Kontrolle der Reaktionsgeschwindigkeit in synthetischen Systemen und erweitern das Verständnis möglicher Funktionen membranloser Organellen in vivo. Insgesamt zeige ich, dass über- legt entworfene synthetische Zellen eine hervorragende biomimetische Plattform bieten, um Einblicke in den Einfluss von membranloser Kompartimentierung auf enzymatische Reaktionen zu gewinnen. Teile der vorgestellten Arbeit wurden als wissenschaftliche Beiträge in zwei begutachteten Journalen als Erstautor veröffentlicht.

Block copolymer (BCP) thin film patterns, generated using directed self-assembly (DSA) of diblock copolymers, have shown excellent promise as templates for semiconductor device manufacturing since they have the potential to produce feature pitches and sizes well below 20 nm and 10 nm, respectively, using current 193 nm optical lithography. The goal of this work is to explore block copolymers with sufficient thermodynamics driving force (as described by the Flory Huggins interaction parameter, χ) for phase separation at these smallest lengths scales. Here, poly(styrene)-b-poly(hydroxystyrene) is investigated since the PHOST domain is known to form extensive hydrogen bond networks resulting in increased χ due to this strong enthalpic interaction. In this work, nitroxide mediated polymerization (NMP) techniques were utilized to produce PS-b-PHOST diblock copolymers with a range of molecular weights (5000-30000) with low PDI approaching 1.2. The phase separation of low molecular weight PS-b-PHOST on neutral underlayer substrates via solvent annealing provided thin film vertical lamellae with 13 nm pitch. These results illustrate the improved resolution of PS-b-PHOST compared with the current industry standard of PS-b-PMMA (with 20 nm pitch). The directed self assembly of lamellar PS-b-PHOST patterns with 18 nm pitch via graphoepitaxy is demonstrated. Also, a highly selective atomic layer deposition (ALD) and etch technique was investigated which provided selective block removal of (PS-b-PHOST) block copolymer patterns which initially exhibited no inherent etch contrast. In this process, the PS domain is removed leaving a high fidelity etch relief pattern of the original block copolymer template. Finally, an alternative system is presented, namely Poly(trimethylsilylstyrene)-block-poly(hydroxystyrene) (PTMSS-b-PHOST), which utilizes silicon containing functionality in one of the blocks, providing high etch contrast. PTMSS-b-PHOST patterns were also exposed to oxygen plasma allowing selective block removal of the PS domain without the need for additional ALD processing steps.

Les protéines de type prion, contenant des Séquences en acides aminés de Faible Complexité (SFC), ont tendance à s’agréger et à former des compartiments non-membranaires dans la cellule. Ces derniers ont des propriétés physiques communes à celles des liquides, telles que la capacité de mouiller les surfaces, de s’écouler et de fusionner avec d’autres corps liquides. Dans cette étude, nous avons démontré que la protéine Hrp1 forme, in vitro, des gouttes de différentes tailles via une transition de phase liquide à liquide, et ce, uniquement lorsqu’elle est exposée à un milieu chargé négativement. Exclusivement dans ce même milieu, nous avons aussi observé que le domaine SFC de Hrp1 s’assemble et forme une matière de type gel. Sur la base de ces observations, nous avons émis l’hypothèse que la tendance des systèmes moléculaires à former des compartiments liquides in vivo peut être influencée par la présence, dans le cytosol, de polyélectrolytes chargés négativement tels que l'ADN, l'ARN et les polyphosphates (PolyP). En utilisant la levure comme modèle cellulaire et des techniques de microscopie à fluorescence, nous nous sommes focalisés sur l’étude du rôle des PolyP dans l'assemblage des P-bodies. Les P-bodies ont été choisis comme système moléculaire de référence in vivo, étant des corps qui, après une transition de phase, se trouvent dans le cytosol sous forme de gouttes. Nous avons démontré que la déplétion du phosphate et la délétion du gène vtc4, responsable de la synthèse des PolyP dans la levure, n’ont pas d’influence dans la formation des P-bodies. Nous avons aussi remarqué que les PolyP et la protéine Edc3, une des composantes principales des P-bodies, ne sont pas co-localisés dans la cellule. Cette étude préliminaire nous suggère un manque de corrélation entre la formation des P-bodies et la présence de PolyP dans la cellule. Cependant, pour confirmer nos observations, des expériences complémentaires doivent être envisagées, en considérant d’autres composantes des P-bodies, tel que Lsm4, ou en analysant, in vivo, les effets des PolyP sur d’autres systèmes moléculaires de nature liquide. / Prion-like proteins containing Low Complexity Sequences (LCSs) have the propensity to aggregate and form membrane-less compartments in the cell. These proteins form droplets that have liquid features such as wetting, dripping and fusion. In this study, we demonstrated that the prion domain-containing protein Hrp1 forms droplets of different sizes in the presence of negatively charged polymers via liquid-liquid phase separation, whereas under the same conditions, the prion-like domain PolyQ/N of Hrp1 forms a gel-like material. Based on these findings, we hypothesize that droplets in vivo could be modulated by negatively charged polyelectrolytes found in the cell such as DNA, RNA and polyphosphate (PolyP). My goal was to examine the role of the polyanionic nature of PolyP on the assembly of P-bodies using Saccharomyces cerevisiae as a cellular model and fluorescence microscopy. We chose to study processing (P)- bodies, based on previous findings that these cellular subcompartments are formed by liquid-liquid phase separation of component proteins in the cytoplasm. We found that depleting phosphate from the media and deleting vtc4 gene, which is responsible for PolyP synthesis, did not have any effect on P-body formation. In addition, we demonstrated that PolyP and the protein Edc3, a core component of P-bodies, do not colocalize. Our data suggest that PolyP does not affect P-body formation. However, further and complementary studies have to be performed to confirm that PolyP have no effects on other membrane-less organelles.

L’électrofilage est un procédé permettant de préparer des fibres possédant un diamètre de l’ordre du micromètre ou de quelques centaines de nanomètres. Son utilisation est toutefois limitée par le manque de contrôle sur la structure et les propriétés des fibres ainsi produites. Dans ce travail, des fibres électrofilées à partir de mélanges de polystyrène (PS) et de poly(vinyl méthyl éther) (PVME) ont été caractérisées. La calorimétrie différentielle à balayage (DSC) a montré que les fibres du mélange PS/PVME sont miscibles (une seule transition vitreuse) lorsque préparées dans le benzène, alors qu'une séparation de phases a lieu lorsque le chloroforme est utilisé. Les fibres immiscibles sont néanmoins malléables, contrairement à un film préparé par évaporation du chloroforme qui a des propriétés mécaniques médiocres. Des clichés en microscopies optique et électronique à balayage (MEB) ont permis d’étudier l'effet de la composition et du solvant sur le diamètre et la morphologie des fibres. Des mesures d’angles de contact ont permis d’évaluer l’hydrophobicité des fibres, qui diminue avec l’ajout de PVME (hydrophile); les valeurs sont de 60° supérieures à celles des films de composition équivalente. Un retrait sélectif du PVME a été réalisé par l’immersion des fibres dans l’eau. La spectroscopie infrarouge a montré que la composition passe de 70 à 95% de PS pour une fibre immiscible mais seulement à 75% pour une fibre miscible. Ces résultats indiquent que la phase riche en PVME se situe presque uniquement à la surface des fibres immiscibles, ce qui a été confirmé par microscopie à force atomique (AFM) et MEB. Finalement, l’effet du mélange des deux solvants, lors de l’électrofilage du mélange PS/PVME, a été étudié. La présence du chloroforme, même en quantité réduite, provoque une séparation de phases similaire à celle observée avec ce solvant pur. / Electrospinning is a simple method for the preparation of polymer fibers with diameters of hundreds of nanometers to a few micrometers. Although it is a versatile method, some issues remain in the control of the structure and properties of electrospun fibers. In this study, fibers electrospun from polystyrene (PS)/poly(vinyl methyl ether) (PVME) blends were characterized. Differential scanning calorimetry (DSC) revealed that fibers electrospun from benzene are miscible while a phase separation occurs when the fibers are electrospun from chloroform. While films cast from chloroform show poor mechanical properties, immiscible fibers are ductile. The effects of the blend composition and the solvent on the fiber diameter and morphology were observed by scanning electron microscopy (SEM) and optical microscopy. Afterwards, contact angle measurements were made to evaluate the hydrophobicity of the fibers which decreases as hydrophilic PVME is added to the blend; the values for the fibers were found to be 60° higher than their equivalent in films. PVME was selectively removed from the immiscible fibers by complete immersion into water. Infrared spectroscopy revealed that this process increases the PS content from 70 to 95% for immiscible fibers but only to 75% for miscible fibers. These results show that the PVME-rich phase is almost completely distributed on the fiber surface, which was confirmed by atomic force microscopy (AFM) and SEM. Finally, the electrospinning of PS/PVME blends from chloroform/benzene solutions was studied. The presence of chloroform, even as a residual amount, causes a phase separation just as it does in fibers electrospun from pure chloroform.

Les macrolactones sont des squelettes structuraux importants dans de nombreuses sphères de l’industrie chimique, en particulier dans les marchés pharmaceutiques et cosmétiques. Toutefois, la stratégie traditionnelle pour la préparation de macrolactones demeure incommode en requérant notamment l’ajout (super)stœchiométrique d’agents activateurs. Conséquemment, des quantités stœchiométriques de sous-produits sont générées; ils sont souvent toxiques, dommageables pour l’environnement et nécessitent des méthodes de purification fastidieuses afin de les éliminer. La présente thèse décrit le développement d’une macrolactonisation efficace catalysée au hafnium directement à partir de précurseurs portant un acide carboxylique et un alcool primaire, ne générant que de l’eau comme sous-produit et ne nécessitant pas de techniques d’addition lente et/ou azéotropique. Le protocole a également été adapté à la synthèse directe de macrodiolides à partir de mélanges équimolaires de diols et de diacides carboxyliques et à la synthèse de dimères tête-à-queue de seco acides. Des muscs macrocycliques ainsi que des macrolactones pertinentes à la chimie médicinale ont pu être synthétisés avec l’approche développée. Un protocole pour l’estérification directe catalysée au hafnium entre des acides carboxyliques et des alcools primaires a aussi été développé. Différentes méthodes pour la macrolactonisation catalytique directe entre des alcools secondaires et des acides carboxyliques ont été étudiées. En outre, la stratégie de séparation de phase en macrocyclisation en débit continu a été appliquée lors de la synthèse totale formelle de la macrolactone ivorenolide A. Les étapes-clés de la synthèse incluent une macrocyclisation par le couplage d’alcynes de Glaser-Hay et une réaction de métathèse d’alcènes Z-sélective. / Macrolactones are important structural motifs in numerous chemical industries particularly in the pharmaceutical and cosmetic markets. However, the traditional strategy for the preparation of macrolactones remains cumbersome, often requiring stoichiometric or excess amounts of activating reagents. Consequently, stoichiometric quantities of by-products are generated. They are often toxic, environmentally damaging, and/or require tedious purification methods to remove them. The following thesis describes the development of an efficient hafnium-catalyzed direct macrolactonization between carboxylic acid and primary alcohol functionalities, generating only water as a by-product and without the need for slow addition or azeotropic techniques. The protocol was also adapted for the direct synthesis of macrodiolides from equimolar mixtures of diols and dicarboxylic acids and for the selective head-to-tail dimerization of seco-acids. Macrocyclic musks and macrolactones relevant to medicinal chemistry were synthesized using the developed approach. A hafnium-catalyzed esterification protocol between carboxylic acids and primary alcohols was also developed. Different methods for the direct catalytic macrolactonization from secondary alcohols and carboxylic acids were studied. Furthermore, the phase separation strategy for macrocyclization in continuous flow was applied in the formal total synthesis of the macrolactone ivorenolide A. The key steps of the synthesis include the Glaser-Hay alkyne coupling macrocyclization and a Z-selective olefin metathesis reaction.

Le but de ce travail de thèse consiste à étudier les propriétés physico-chimiques des verres chalcogénures afin de pouvoir les utiliser comme membranes de capteurs chimiques destinés pour le dosage des ions Hg²⁺. Dans un premier temps, les propriétés macroscopiques des systèmes vitreux AgY-As₂S₃ (Y = Br, I), HgS-GeS₂, AgI-HgS-As₂S₃ et AgI-HgS-GeS₂, telles que les densités et les températures caractéristiques (Tg et Tc) ont été mesurées et analysées selon les compositions des verres. Puis, dans un second temps, les propriétés de transport ont été étudiés à l'aide de la spectroscopie d'impédance complexe d'une part, ou d'autre part, par des mesures de la résistivité. Ces dernières montrent que les verres de chalcogénures dopés à l'halogénure d'argent présentent deux différents régimes de transports au-dessus du seuil de percolation xc ≈ 30 ppm : (i) domaine de percolation critique, et (ii) domaine contrôlé par modificateur. Vient ensuite la troisième partie, elle consiste à déchiffrer les relations composition/structure/propriété grâce à plusieurs études structurales. Des mesures par spectroscopie Raman, par diffraction de neutrons et de rayons X haute énergie, par diffusion des neutrons sous petits angles (SANS), ainsi que des modélisations RMC/DFT et AMID ont été réalisées. Enfin, la dernière partie de ce travail était une étude préliminaire des caractéristiques des nouveaux capteurs chimiques. Il a été consacré à l'étude des relations entre la composition et la sensibilité des membranes ainsi qu'aux limites de détection qui les définissent. / The aim of the thesis is to study the physicochemical properties of the silver halide doped chalcogenide glasses for the possibility to use them as chemical sensors for quantitative analysis of Hg²⁺ ions. First, the macroscopic properties of AgY-As₂S₃ (Y = Br, I), HgS-GeS₂, AgI-HgS-As₂S₃ and AgI-HgS-GeS₂ glassy systems such as the densities and the characteristic temperatures (Tg and Tc) were measured and analyzed according to the glass compositions. Second, the transport properties were studied using complex impedance and dc conductivity. Measurements show that the silver halide doped chalcogenide glasses exhibit two drastically different ion transport regimes above the percolation threshold at xc ≈ 30 ppm : (i) critical percolation, and (ii) modifier-controlled regimes. Third, to unveil the composition/structure/property relationships, various structural studies were carried out. Raman spectroscopy, high-energy X-ray diffraction, neutron diffraction and small-angle neutron scattering experiments, together with RMC/DFT and AMID modelling were employed. Finally, the last part was a preliminary study of the characteristics of new chemical sensors. It was devoted to study the relationship between the membranes' composition and sensitivity but also detection limits.