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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
271

Etude du système de sécrétion de type VI chez Escherichia coli entéro-agrégatif : Caractérisation d'un sous complexe d'ancrage membranaires

Aschtgen, Marie-Stéphanie 16 December 2011 (has links)
Bacterial pathogenesis relies on a subset of mechanisms including adhesion to various matrices, antibiotic resistance, defence and action against surrounding microorganisms, and secretion of virulence factors. Among the secretion systems, the recently identified Type VI secretion system (T6SS) has been shown to be involved in both virulence against eukaryotic cells and inter-bacterial warfare. T6SS are composed of a minimum of 13 proteins called "core components". It is believe to form a macromolecular system that spans the envelope to assemble an extracellular structure composed of the Hcp protein with a trimer of VgrG located at the tip. This model has been built following in silico and structural analyses demonstrating the link between several T6SS subunits and bacteriophage T4 baseplate and tail elements. Other T6SS subunits include membrane proteins. Using enteroaggregative Escherichia coli as a bacterial model, the aim of my work is to understand how this system assembles in the cell envelope. I recently showed that four of these membrane proteins, SciP, SciS, SciN and SciZ make contact to form a complex [1]. These four subunits are critical components of the T6SS. I then delineated the interaction network, demonstrating that SciZ interacts with SciP, and that SciS interacts with both SciP and SciN. Further characterization of these subunits showed that SciN is a lipoprotein associated with the outer membrane [2, 4], whereas SciP and SciS are inner membrane proteins anchored through a single and three transmembrane segments respectively. SciZ is a polytopic inner membrane protein carrying a peptidoglycan-binding motif within its periplasmic domain. Mutagenesis and peptidoglycan binding experiments demonstrated that SciZ anchors the T6SS to the cell wall [1, 3]. Overall, we have identified and characterized a trans-envelope complex anchored in both membrane and to the peptidoglycan layer. / Bacterial pathogenesis relies on a subset of mechanisms including adhesion to various matrices, antibiotic resistance, defence and action against surrounding microorganisms, and secretion of virulence factors. Among the secretion systems, the recently identified Type VI secretion system (T6SS) has been shown to be involved in both virulence against eukaryotic cells and inter-bacterial warfare. T6SS are composed of a minimum of 13 proteins called "core components". It is believe to form a macromolecular system that spans the envelope to assemble an extracellular structure composed of the Hcp protein with a trimer of VgrG located at the tip. This model has been built following in silico and structural analyses demonstrating the link between several T6SS subunits and bacteriophage T4 baseplate and tail elements. Other T6SS subunits include membrane proteins. Using enteroaggregative Escherichia coli as a bacterial model, the aim of my work is to understand how this system assembles in the cell envelope. I recently showed that four of these membrane proteins, SciP, SciS, SciN and SciZ make contact to form a complex [1]. These four subunits are critical components of the T6SS. I then delineated the interaction network, demonstrating that SciZ interacts with SciP, and that SciS interacts with both SciP and SciN. Further characterization of these subunits showed that SciN is a lipoprotein associated with the outer membrane [2, 4], whereas SciP and SciS are inner membrane proteins anchored through a single and three transmembrane segments respectively. SciZ is a polytopic inner membrane protein carrying a peptidoglycan-binding motif within its periplasmic domain. Mutagenesis and peptidoglycan binding experiments demonstrated that SciZ anchors the T6SS to the cell wall [1, 3]. Overall, we have identified and characterized a trans-envelope complex anchored in both membrane and to the peptidoglycan layer.
272

Régulations de la sécrétion et de l’activité biologique de la protéine Tat du VIH-1 : rôles de la palmitoylation et de Gag / Regulations of HIV-1 Tat secretion and biological activity : role of palmitoylation and Gag

Chopard, Christophe 17 December 2014 (has links)
La protéine du VIH-1 est une protéine essentielle à la transcription et à la réplication du virus. Elle a donc un rôle crucial dans la cellule infectée. On sait qu'une partie de la Tat cellulaire peut être sécrétée, malgré l'absence de séquence signal. En effet, les 2/3 de la Tat cellulaire sont exportés par la cellule T-primaire infectée. Le mécanisme de sécrétion de Tat est non conventionnel et se produit directement à travers la membrane plasmique où Tat est recrutée grâce à sa très forte affinité pour le phosphatidylinositol(4,5)-biphosphate ou PI(4,5)P2 qui est exclusivement localisé à ce niveau. La Tat extracellulaire a un effet délétère sur de nombreux types cellulaires et agit donc comme une toxine virale. Elle constitue un facteur déterminant de l'évolution vers le SIDA. En accord avec cette efficacité de sécrétion par les cellules T primaires infectées, Tat est essentiellement localisée sur la membrane plasmique des T primaires infectées par le VIH-1. Une fraction importante de Tat est donc résidente à la membrane et nous avons recherché un mécanisme pouvant expliquer cette rétention et mis en évidence la palmitoylation. Nos travaux montrent que Tat est palmitoylée, dans des cellules T ainsi que dans les ‘cibles' comme les neurones et les macrophages. Cette palmitoylation, qui inhibe la sécrétion de Tat, est réalisée sur la cystéine 31 de Tat (qui possède 7 cystéines) par l'enzyme DHHC20 avec comme cofacteurs nécessaires les immunophilines (prolyl-isomérases), Cyclophiline A et FKBP12, qui interagissent avec Tat au niveau de la membrane. Nos résultats indiquent aussi qu'en présence de Gag, la palmitoylation de Tat est inhibée. Nous pensons que l'export de la CypA dû à son encapsidation diminuerait la quantité de CypA disponible pour Tat, inhibant la palmitoylation de Tat et permettant sa sécrétion efficace par les cellules infectées. En effet, le VIH-1 encapside 250 copies de CypA/virion, le taux de CypA régulant la virulence des virions produits. Dans les cellules cibles, Tat serait fortement palmitoylée ce qui induirait sa fixation quasi irréversible au PI(4,5)P2, l'empêchant de ressortir de la cellule et permet ainsi un effet cumulatif des doses reçues par la cellules. Cette accumulation de Tat perturbe des processus membranaires dépendant du PI(4,5)P2 tels que la phagocytose et la neurosécrétion. La palmitoylation de Tat est nécessaire pour ces effets. Ces actions de la Tat extracellulaire pourraient participer au développement des infections opportunistes et des troubles neurologiques observé lors du SIDA. / HIV-1 Tat is a small protein that is required for viral transcription and multiplication. It thus has a crucial role in the infected cell. It was known that Tat can be secreted despite its lack of signal sequence. In fact 2/3 of cellular Tat are exported by infected primary T-cells. The unconventional secretion of Tat relies on its interaction with phosphatidylinositol(4,5)-biphosphate or PI(4,5)P2, a lipid that is concentrated within the inner leaflet of the plasma membrane and is strictly required for Tat secretion. Exogenous Tat has deleterious effects on several cell types, indicating that extracellular Tat is involved in evolution to AIDS. Consistent with this secretion efficiency, Tat is mainly localized at the plasma membrane of primary T-cells infected by HIV-1. A large fraction of Tat is resident at the membrane and we looked for a mechanism that could explain this retention and discovered that Tat is palmitoylated. Our studies show that Tat is palmitoylated, both in T-cells and also in ‘target' cells such as neurons and macrophages. Tat palmitoylation inhibits its secretion and is performed on Tat cysteine 31 (Tat has seven cyteines) by the enzyme DHHC20 using immunophilins (prolyl ismerases), Cyclophilin A (CypA) and FKPB12, as cofactors. Our results also indicate that the presence of Gag inhibits Tat palmitoylation. We believe that the export of CypA due to its encapsidation will make less CypA available for Tat, thereby inhibiting Tat palmitoylation. Indeed, HIV-1 encapsidates 250 copies of CypA/virion and the amount of CypA regulates the virulence of produced virions. In target cells, Tat is strongly palmitoylated and this modification induces its almost irreversible binding to PI(4,5)P2, preventing its secretion and allowing cumulative effect of minute Tat doses.Tat palmitoylation enables Tat to severely inhibit various PI(4,5)P2-dependent processes such as phagocytosis and neurosecretion. These effects of extracellular Tat likely contribute to the development of opportunistic infections and neurological disorders observed during AIDS.
273

Rôle de la clathrine dans le processus infectieux du champignon phytopathogène Botrytis cinerea / Role of clathrin in infection process of fungal plant pathogen Botrytis cinerea

Souibgui, Eytham 04 May 2017 (has links)
Les champignons sont les principaux agents pathogènes des plantes. Leur étude est donc essentielle pour contrôler les maladies et maintenir un bon rendement de production agricole. La nutrition de ces pathogènes est basée sur l'absorption de nutriments, préalablement dégradés par un arsenal d'enzymes lytiques secrétées. La sécrétion des protéines est assurée par le trafic intracellulaire mettant en jeu de nombreuses vésicules. Chez les champignons filamenteux, ces vésicules ont été visualisées en microscopie électronique mais le processus mis en jeu pour leur biogénèse n'est toujours pas élucidé. L'identification de ce mécanisme est un donc un prérequis pour comprendre la sécrétion de facteurs de virulence. Dans ce but, un mutant non pathogène altéré au niveau de l'expression du gène codant la chaine lourde de la clathrine a été sélectionné parmi une banque de mutants générés chez le champignon nécrotrophe Botrytis cinerea. Le gène codant pour la chaine lourde de la clathrine est essentiel chez de nombreux organismes, ainsi un mutant dominant négatif de la chaine lourde de la clathrine a été généré et confirme la perte de pathogénicité. La caractérisation du mutant par une approche de protéomique a mis en évidence un défaut de sécrétion de 82 protéines incluant des facteurs de virulence connus. Un défaut de production de vésicules intracellulaires a également été constaté. Par ailleurs, le marquage de la clathrine à la GFP a permis de préciser sa localisation dans les cellules fongiques. Enfin, de façon surprenante, aucun défaut d'endocytose n'a été constaté au sein des mutants déficients en clathrine. Cette étude met en évidence pour la première fois le rôle essentiel de la clathrine dans le processus infectieux d'un champignon pathogène ainsi que son rôle dans a sécrétion de facteurs de virulence / Fungi are the most important plant pathogens on agricultural and horticultural crops. Study of fungal pathogens remains essential to understand pathogenic process and control plant diseases. These organisms secrete high amount of degrading enzymes involved in plant decomposition and they feed by absorption of degraded nutriments. Secretory proteins were described to be transported form Endoplasmic Reticulum and Golgi apparatus to extracellular space through intracellular vesicles. In filamentous fungi, intracellular vesicles were observed using electron microscopy but their biogenesis process is still unknown. Therefore, elucidation of the process and the identification of proteins involved in secretory vesicles biogenesis remains a challenge to understand virulence factors delivery. A nonpathogenic mutant altered in the expression of the gene coding for clathrin heavy chain was selected in a random mutant library generated in the necrotrophic pathogen Botrytis cinerea,. This gene is essential in many organisms, thus a clathrin dominant negative mutant was generated and confirming the nonpathogenic phenotype observed on several host plant. In eukaryotic cells, clathrin heavy chain is mainly described to be involved in endocytosis, but it is also essential for high density secretory vesicles formation in yeast. Characterization of the mutants using a proteomic approach revealed a secretion defect of 82 proteins including known virulence factors, as Plant Cell Wall Degrading Enzymes and elicitors. Furthermore, the clathrin mutant revealed a strong reduction of intracellular vesicles production. Clathrin was also localized in living cells using fluorescent GFP-tag protein. Endocytosis was also studied and surprisingly, any observable defect was observed for clathrin mutants. This study demonstrated for the first time the essential role of clathrin in the infectious process of a fungal pathogen and its role in virulence factors secretion
274

Isolamento de peptídeos antimicrobianos de anuros da fauna brasileira / Isolation of antimicrobial peptides of frogs of the brazilian fauna

Fernandes, Daniele Gordillo 28 August 2014 (has links)
O aparecimento de cepas microbianas com resistência aos antibióticos comumente usados em âmbito mundial constitui um sério problema de saúde pública, estimulando a busca por novos compostos antimicrobianos para os quais a resistência ainda não foi adquirida. A secreção cutânea de várias espécies de anuros (rãs, sapos e pererecas) é uma rica fonte de peptídeos com amplo espectro de atividade antibacteriana e antifúngica, com grande potencial para o desenvolvimento de fármacos. O presente trabalho visou à investigação da presença de agentes antimicrobianos na secreção cutânea das espécies brasileiras Dermatonotus muelleri, Leptodactylus labyrinthicus, Phyllomedusa burmeisteri, Rhinella icterica, Trachycephalus resinifictrix. Utilizando a estimulação mecânica do tegumento para extração e posteriormente a liofilização dessas secreções. Os testes antimicrobianos foram realizados através da técnica de disco difusão, onde as secreções testadas foram solubilizadas em diferentes solventes e em placas contendo bactérias Gram-negativas e Gram-positivas. As secreções com maior potencial antibacteriano foram fracionadas por Cromatografia líquida de alta eficiência fase reversa em uma coluna C8 e C18 5μm. Tendo suas frações também testadas em disco-difusão. As frações que formaram halos de inibição foram submetidas à espectrometria de massa para a identificação de suas moléculas. Desta forma foi comprovado a ação antimicrobiana das secreções de Rhinella icterica, Phyllomedusa burmeisteri e Trachycephalus resinifictrix e de suas receptivas frações. / The appearance of microbial strains that are resistant to common antibiotics used in a global scope represents a serious public health issue, stimulating the search for new antimicrobial compounds that resistance was not acquired yet. The cutaneous secretion of several anurans species (frogs, toads and tree frogs) is a rich source of peptides with a broad spectrum of antimicrobial and antifungal activity, with a big potential to drug development. The present work aimed the investigation of the presence of antimicrobial agents in the cutaneous secretion of the Brazilian species Dermatonotus muelleri, Leptodactylus labyrinthicus, Phyllomedusa burmeisteri, Rhinella icterica, Trachycephalus resinifictrix. For the extraction of these secretions it was utilized the integument mechanical stimulation and later on these secretions were lyophilized. For the antimicrobial tests it was used the disk diffusion technique, where the test secretions were solubilized in different solvents and in plates containing Gram-negative and Gram-positive bacteria. The secretions with the highest antimicrobial potential were fractionated by a high-performance liquid chromatography reverse phase in the columns C8 and C18 5μm. These fractions were also tested in disk diffusion. The fractions that formed inhibition zones were submitted to mass spectrometry for the identification of their molecules. This way it was evidenced antimicrobial activity of secretions from Rhinella icterica, Phyllomedusa burmeisteri and Trachycephalus resinifictrix and from their respective fractions.
275

Estudos funcionais e bioquímicos sobre o reconhecimento e inibição de efetores de um sistema de secreção  tipo IV de Xanthomonas citri subsp. citri. / Functional and biochemical son the recognition and Inhibition of effectors of a Type IV secretion System of Xanthomonas citri subsp. citri

Oka, Gabriel Umaji 03 October 2017 (has links)
Sistemas de Secreção Tipo IV (T4SSs), normalmente compostos por 12 proteínas (VirB1-VirB11 e VirD4) são tipicamente associados às funções de conjugação bacteriana e transferência de fatores de patogenicidade para células hospedeiras. Mas também, muitas espécies da ordem Xanthomonadales possuem um T4SS associado a matar bactérias. O modelo atual de morte de uma célula-alvo mediada pelo T4SS é baseado na secreção de toxinas denominadas XVIPs (\"Xanthomonas VirD4 interacting proteins\") ou X-Tfe (Xanthomonadaceae-T4SS effector) no qual cada XVIP/X-Tfe apresenta uma proteína de imunidade cognata denominada X-Tfi (Xanthomonadaceae-T4SS immunity protein). Demonstramos que um XVIP, XAC2609, é secretado através do T4SS de modo que depende de contato célula-célula e do seu domínio XVIPCD (\"XVIP conserved domains\"). A porção N-terminal de XAC2609 codifica um domínio GH19 que cliva a peptideoglicana de E. coli, mas perde a sua atividade na presença do seu inibidor cognato, o X-Tfi XAC2610. Portanto, XAC2609/XAC2610 formam um par de proteínas efetora/imunidade associado ao T4SS de X. citri. Através de diferentes técnicas de microscopias utilizando a cepa Δxac2610, foi observado que XAC2610 protege o envelope celular de X. citri contra efeitos de autólise celular promovidos pela atividade de XAC2609. Ensaios funcionais baseados nas observações de fenótipos de colônias e de formação de biofilme mostraram que XAC2610 confere imunidade para X. citri contra uma atividade 7 intrínseca de XAC2609. A proteína com o papel de reconhecer os substratos através da interação com os sinais de secreção do T4SS é VirD4. No T4SS de X. citri, existe a hipótese de que o domínio XVIPCD seja o sinal de secreção presente nas XVIPs. Logo, os aspectos bioquímicos e biofísicos da interação VirD4-XVIPCD foram investigados através de experimentos de co-purificação por cromatografia de afinidade e exclusão molecular, RMN e SAXS. Demonstramos que o domínio AAD de VirD4 (VirD4AAD) está associado a interagir especificamente com o domínio XVIPCD de XAC2609 (XAC2609XVIPCD), formando um heterodímero em solução. VirD4AAD é um domínio globular e monomérico e XAC2609XVIPCD é desenovelado mas se enovela concomitante à interação com VirD4AAD. Construções de XAC2609 contendo mutações pontuais no domínio XVIPCD foram utilizadas em ensaios in vivo de secreção pela X. citri e ensaios in vitro de interação com VirD4AAD por titulação monitorada por calorimetria isotérmica (ITC). Através desses experimentos, observamos que uma forte interação entre VirD4AAD-XAC2609XVIPCD é essencial para secreção de XAC2609 via o T4SS. Esses resultados permitem concluir que o domínio XVIPCD é o sinal de secreção dos substratos do T4SS de X. citri e que o AAD confere especificidade à VirD4 por interagir com o XVIPCD. Finalmente, através de ensaios de competições bacterianas entre E. coli e X. citri, foram observados diferentes fenótipos associados à função do T4SS: i) nocautes gênicos das subunidades estruturais VirB5, VirB11 abolem a função do T4SS em X. citri.; ii) nocautes de xac2611, apresentaram uma maior vantagem adaptativa do que a cepa selvagem de X. citri em competições e a expressão epissomal de XAC2611 inibe fortemente a função do T4SS e iii) a atividade ATPásica de VirD4 é essencial para a função do sistema e a expressão de mutantes 8 de VirD4 exerce um fenótipo de dominância negativa sobre a função do T4SS em X. citri. / The Type IV secretion System (T4SS) is typically associated with the function of bacterial conjugation and as a pathogenicity factor. T4SSs are normally composed of 12 proteins, VirB1-VirB11 and VirD4. Many species of the order Xanthomonadales possess a T4SS associated with killing bacteria. The current model of the T4SS killing is based on the secretion of toxins denominated XVIPs/X-Tfes (Xanthomonas VirD4 interacting proteins) /(Xanthomonadaceae-T4SS effector) in which each XVIP/X-Tfe has a cognate immunity protein denominated X-Tfi (Xanthomonadaceae-T4SS immunity protein). We demonstrate that an XVIP, XAC2609, is secreted through the T4SS so that it depends on cell-cell contact and its XVIPCD domain (\"XVIP conserved domains\"). The N-terminal portion of XAC2609 encodes a GH19 domain which cleaves the E. coli peptidoglycan but loses its activity in the presence of its cognate inhibitor, X-Tfi XAC2610. Therefore, XAC2609 /XAC2610 form a pair of effector/immunity proteins associated with X. citri T4SS. By using the X. citri Δxac2610 strain, has been shown through different microscopic techniques that XAC2610 protects the cell envelope of X. citri against the effects of cellular autolysis promoted by XAC2609 activity. Functional assays based on observations of colony phenotypes and biofilm formation has shown that XAC2610 confers immunity to X. citri against an intrinsic activity of XAC2609. VirD4 is the protein that recognizes the substrates through the interaction with the T4SS secretion signals. In the T4SS of X. citri, is hypothesized that the XVIPCD domain is the secretion signal present in the XVIPs. Here, the biochemical and biophysical aspects of the VirD4-XVIPCD interaction were investigated through Pull- Down, Molecular Exclusion Chromatography, NMR and SAXS assays. It has been shown the AAD domain of VirD4 (VirD4AAD) is associated with specifically interacting with the XAC2609XVIPCD domain (XAC2609XVIPCD), forming a heterodimer in solution. VirD4AAD is a globular and monomeric domain while XAC2609XVIPCD is elongated, but upon interaction with VirD4AAD goes through structural compaction process. Constructs of XAC2609 containing point mutations in the XVIPCD domain were used to perform secretion experiments in X. citri and Isothermal titration calorimetry against VirD4AAD. Through these assays, it has been characterized that a strong interaction between VirD4AAD-XAC2609XVIPCD is essential for secretion of XAC2609 via T4SS. Consequently, these results allow concluding that the XVIPCD domain is the secretion signal of X. citri T4SS substrate and the AAD confer specificity to VirD4 by interact with the XVIPCD domains. Finally, bacterial competitions between E. coli and X. citri showed different phenotypes associated with T4SS function: i) virB5, virB11 knockouts abolish the function of T4SS in X. citri.; ii) knockouts of xac2611 exhibited a higher adaptive efficiency than the wild-type X. citri strain in competitions, but the expression of XAC2611 abolishes the function of T4SS in the wild strain of X. citri; iii) The ATPase activity of VirD4 is essential and exerts a negative dominance over the T4SS function in X.citri.
276

A desregulação dos genes relógio modifica o estado redox das células β pancreáticas e modula a secreção de insulina estimulada pela glicose via NADPH oxidase. / Clock genes dysregulation modifies the redox state of pancreatic β cell and modulates glucose stimulated insulin secretion via NADPH oxidase.

Jesus, Daniel Simões de 06 October 2015 (has links)
Os genes relógio são responsáveis pelo ritmo circadiano e homeostase de diversos sistemas biológicos, incluindo o pâncreas endócrino. Nas células β são de grande importância para a regulação do metabolismo e da secreção de insulina (SI), e sua ausência pode levar ao desenvolvimento do diabetes. A NADPH oxidase (NOX) é um complexo enzimático responsável pela produção do ânion superóxido através da redução do oxigênio molecular. Em ilhotas pancreáticas, a NOX participa da regulação do metabolismo da glicose e da SI, através da modulação do estado redox intracelular. O objetivo do nosso estudo foi verificar se a desregulação dos genes relógio mediada pela ausência de Bmal1 seria capaz de modular a NOX e o estado redox nas células β pancreáticas, influenciando assim a SI. Observamos que a ausência de Bmal1 alterou a atividade e expressão da NOX, desregulando o estado redox intracelular. Essas alterações levaram à redução da viabilidade celular e mudanças na resposta à estimulação com glicose, resultando em uma deficiência na principal função da célula β a SI. / Clock genes are responsible for homeostasis and circadian rhythm in various biological systems, including endocrine pancreas. In β -cells, they are important for the regulation of metabolism and insulin secretion (IS), and its absence can lead to development of diabetes. NADPH oxidase (NOX) is an enzymatic complex responsible for production of superoxide anion by reducing molecular oxygen. In pancreatic islets, NOX regulates glucose metabolism and IS through modulation of the intracellular redox state. The aim of our study was to investigate whether dysregulation of clock genes mediated by Bmal1 suppression would be able to modulate NOX activity and redox state in pancreatic β cells, thus influencing the SI. In this work, the lack of Bmal1 altered the activity and expression of NOX, deregulating the intracellular redox state. These changes led to reduced cell viability and changes in cell response after stimulation with glucose, resulting in a deficiency in β cell main function, GSIS.
277

Studies of Alkyne Cycloaddition Reactions Leading to Isoxazolines and Pyrazolines and Synthesis of Urofuranoic Acids to Assess their Effect on Insulin Secretion

Unknown Date (has links)
The present thesis will be largely focused on identifying and understanding the scope and mechanistic details associated with the tetrabutylammonium fluoride (TBAF) mediated cyclization of alkynyl hydrazines and (O)-hydroxylamines. Also, the synthesis of 2-(2-carboxyethyl)-4-methyl-5-propylfuran-3-carboxylic acid (CMPF) and its analogs will be discussed along with an analysis of their effects on insulin secretion. Chapter 1 will present the importance of developing isoxazoline and pyrazoline type heterocycles given that they are continually demonstrated to possess a variety of biological activities. Further, the scope of the reaction in terms of functional group tolerability, scalability and mild conditions will be shown. To expand the importance of this work, a route to access non-racemic heterocycles is also noted. With the heterocycles in hand, new methods were developed to generate more complex frameworks in the form of a novel one pot deprotection/functionalization reaction. Chapter 2 will focus on mechanistic investigations of the cyclization. From the initial discovery of the reaction, its actual mechanism was unknown and a main point of interest. What appeared unusual is that a nucleophilic attack occurs on an unactivated triple bond. Given the identity of the products, a reasonable proposal was a 5-endo-dig type cyclization. However, such a pathway would result in the generation of a vinyl anion intermediate which is well known to be of very high energy and it would seem unlikely to occur under mild conditions. Various trapping experiments were used to demonstrate that the vinyl anion forms and a 5-endo-dig-cyclization is the operative mechanism. Chapter 3 analyzes the importance of the tetrabutylammonium fluoride reagent. During optimization studies, it became clear that this base is the ideal reagent to facilitate the cyclization although other bases can also enable the transformation at much slower rates. Addition of non-basic ammonium salt additives to bases such as KF and CsF had a dramatic effect on the rate of the reaction. To determine whether the observed rate differences were merely a phase transfer effect or something more, both empirical and Raman spectroscopy data were collected. Based on this, the first evidence for an ammonium-alkyne cation-pi type interaction was shown. Chapter 4 will summarize the work on the synthesis of 2-(2-carboxyethyl)-4-methyl-5-propylfuran-3-carboxylic acid (CMPF) and its analogs in order to be used in various biological assays. The main goals were to determine a possible structure activity relationship between the substrates and insulin secretion in beta cells and also determine the fate of CMPF in vivo. Several 13C labeled analogs of CMPF were synthesized and successfully used to show for the first time that CMPF in metabolized in vivo in mice. / Includes bibliography. / Dissertation (Ph.D.)--Florida Atlantic University, 2017. / FAU Electronic Theses and Dissertations Collection
278

Isolamento de peptídeos antimicrobianos de anuros da fauna brasileira / Isolation of antimicrobial peptides of frogs of the brazilian fauna

Daniele Gordillo Fernandes 28 August 2014 (has links)
O aparecimento de cepas microbianas com resistência aos antibióticos comumente usados em âmbito mundial constitui um sério problema de saúde pública, estimulando a busca por novos compostos antimicrobianos para os quais a resistência ainda não foi adquirida. A secreção cutânea de várias espécies de anuros (rãs, sapos e pererecas) é uma rica fonte de peptídeos com amplo espectro de atividade antibacteriana e antifúngica, com grande potencial para o desenvolvimento de fármacos. O presente trabalho visou à investigação da presença de agentes antimicrobianos na secreção cutânea das espécies brasileiras Dermatonotus muelleri, Leptodactylus labyrinthicus, Phyllomedusa burmeisteri, Rhinella icterica, Trachycephalus resinifictrix. Utilizando a estimulação mecânica do tegumento para extração e posteriormente a liofilização dessas secreções. Os testes antimicrobianos foram realizados através da técnica de disco difusão, onde as secreções testadas foram solubilizadas em diferentes solventes e em placas contendo bactérias Gram-negativas e Gram-positivas. As secreções com maior potencial antibacteriano foram fracionadas por Cromatografia líquida de alta eficiência fase reversa em uma coluna C8 e C18 5μm. Tendo suas frações também testadas em disco-difusão. As frações que formaram halos de inibição foram submetidas à espectrometria de massa para a identificação de suas moléculas. Desta forma foi comprovado a ação antimicrobiana das secreções de Rhinella icterica, Phyllomedusa burmeisteri e Trachycephalus resinifictrix e de suas receptivas frações. / The appearance of microbial strains that are resistant to common antibiotics used in a global scope represents a serious public health issue, stimulating the search for new antimicrobial compounds that resistance was not acquired yet. The cutaneous secretion of several anurans species (frogs, toads and tree frogs) is a rich source of peptides with a broad spectrum of antimicrobial and antifungal activity, with a big potential to drug development. The present work aimed the investigation of the presence of antimicrobial agents in the cutaneous secretion of the Brazilian species Dermatonotus muelleri, Leptodactylus labyrinthicus, Phyllomedusa burmeisteri, Rhinella icterica, Trachycephalus resinifictrix. For the extraction of these secretions it was utilized the integument mechanical stimulation and later on these secretions were lyophilized. For the antimicrobial tests it was used the disk diffusion technique, where the test secretions were solubilized in different solvents and in plates containing Gram-negative and Gram-positive bacteria. The secretions with the highest antimicrobial potential were fractionated by a high-performance liquid chromatography reverse phase in the columns C8 and C18 5μm. These fractions were also tested in disk diffusion. The fractions that formed inhibition zones were submitted to mass spectrometry for the identification of their molecules. This way it was evidenced antimicrobial activity of secretions from Rhinella icterica, Phyllomedusa burmeisteri and Trachycephalus resinifictrix and from their respective fractions.
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O transporte de ânions em células INS-1E não compõe parte do mecanismo da via de amplificação da secreção de insulina estimulada pela glicose. / The anion transport in INS-1E cell line do not composes part of the mechanism of the amplification pathway of glucose stimulated insulin secretion.

Araujo, Daniel Blanc 22 August 2016 (has links)
A via de amplificação da secreção de insulina estimulada por glicose (GSIS) é um fenômeno discutido na literatura, cujos componentes são amplamente debatidos. Evidências sugerem que a condutância a Cl- compõe parte desta via. Porém, o mecanismo pelo qual essa condutância desempenharia papel na via de amplificação ainda é debatido, e, além disso, as ferramentas farmacológicas para estudo dessas afeta o transporte de outros ânions, como bicarbonato (HCO3-). Buscamos neste trabalho compreender a contribuição do transporte desses ânions para a via de amplificação da GSIS levando em consideração a distribuição de Cl- e HCO3- extracelular em células INS-1E. Concluímos que o transporte de ânions nas células INS-1E não contribui para a via de amplificação da GSIS, porém essas células não expressaram os canais CFTR e Anoctamina 1 que foram relacionados com esse fenômeno. Acreditamos que em células secretoras de insulina que expressem esses canais, o transporte de ânions possua alguma relevância funcional. / The amplification pathway of glucose stimulated insulin secretion (GSIS) is a phenomenon discussed in the literature, which components are broadly debated. Evidence suggests that Cl- conductance composes part of this pathway. However, the mechanism that this conductance would play role on the amplification pathway still is debated, and, besides that, the pharmacological tools to study these affects transport of other anions, such as bicarbonate (HCO3-). We aimed in this study to understand the contribuition of anion transport for the amplification of GSIS considering the Cl- and HCO3- extracellular distribuition in INS-1E cells. We concluded that anion transport in INS-1E cell line do not contribute for the amplification pathway of GSIS, however those cells do not express CFTR and Anoctamin 1 channels which were related with this phenomenon. We believe that in insulin secretin cells that express those channels, the anion transport may have a functional relevance.
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Características hematológicas de juvenis de pacu (Piaracatus mesopotamicus, Holmberg, 1887) submetidos a condições adversas e alimentados com colostro bovino / Hematological characteristics of pacu juveniles (Piaractus mesopotamicus, Holmberg, 1887) submitted to high density storage and fed with bovine colostrum

Pampolini, Jessica 11 August 2017 (has links)
Foram avaliadas as características hematológicas, mais especificamente a resposta dos elementos de proteção do sangue, de juvenis de pacu, espécie endêmica e neotropical, mantidos em condições adversas e alimentados com dietas contendo colostro bovino liofilizado. Esta primeira secreção láctea, rica fonte de proteínas, moléculas biologicamente ativas e elementos antioxidantes, pode atuar positivamente no sistema de proteção dos animais. No experimento de estresse crônico, juvenis de pacu foram alocados em elevada densidade (50 kg peixe/m3) por 30 dias. No experimento de estresse agudo, os juvenis permaneceram por 15 dias em gaiolas de alimentação, sendo submetidos à baixa concentração de oxigênio (0,75 mg/L). Durante o período experimental, quatro dietas contendo 0, 10, 20 e 30% de colostro bovino liofilizado (CBL) (com 32% de proteína bruta), foram fornecidas duas vezes diariamente (considerando-se quadruplicatas para cada dieta). Antes do início e ao final de cada experimento, analisou-se para cada lote os parâmetros biométricos de biomassa e comprimento para obtenção de análises de desempenho. Oito juvenis para a situação experimental de adensamento, e dez juvenis para a de hipóxia, de cada tratamento, foram anestesiados com benzocaína e amostras de sangue foram coletadas do vaso caudal para análises hematológicas. Foram realizadas análises de eritrograma, leucograma (contagem total e diferencial de leucócitos), hematócrito e calculados os índices hematimétricos. As imunoglobulinas séricas dos juvenis de pacu foram quantificadas através do método de Turvação por Sulfato de Zinco (ZST), que foi padronizado para peixes no presente trabalho. Os juvenis de pacu foram distribuídos em um delineamento experimental inteiramente casualizado no experimento de estresse crônico, e para o de estresse agudo, em blocos, ambos com quatro tratamentos. Os dados foram submetidos à análise de variância, através do procedimento \"General Linear Model\" (PROC GLM) do programa estatístico SAS (1989). Para a avaliação de diferenças entre médias foram efetuados contrastes entre pares de médias utilizando-se o método de Tukey, onde foi considerada a probabilidade de 5% (P<0,05). Não foi observada influência do colostro bovino no desempenho e nas variáveis hematológicas analisadas em ambas situações experimentais, estresse crônico e agudo. Entretanto, para o experimento de estresse agudo, a inclusão de CBL na dieta dos pacus influenciou o número de células granulocíticas especiais, sendo que o grupo que recebeu 0% de CBL apresentou menor número de células que o grupo que recebeu 10% de CBL, assim como o número de monócitos, sendo que o grupo que recebeu 20% de CBL apresentou menor número de células que o grupo que recebeu 30% de CBL na dieta (P<0,05). Embora o colostro bovino não tenha influenciado as variáveis hematológicas analisadas, não houve efeito negativo à esta fonte de proteína heteróloga fornecida aos peixes, uma vez que o desempenho dos animais que receberam o composto na dieta foi semelhante aos animais que receberam dieta sem esta secreção láctea. Considerando os presentes resultados, o colostro bovino liofilizado, uma fonte rica de moléculas bioativas, não contribuiu para a proteção de juvenis de pacu sujeitos à alta densidade de estocagem e baixa oxigenação. / Hematological characteristics were evaluated, specifically the response of blood protection elements of juvenile pacu, endemic and neotropical species, kept under adverse conditions and fed diets containing lyophilized bovine colostrum. This first milk secretion, a rich protein source, biologically active molecules and antioxidant elements, can act positively in the animal protection system. In the chronic stress experiment, juvenile pacu were allocated at high density (50 kg fish/m3) for 30 days. In the acute stress experiment, the juveniles remained for 15 days in feed cages and were submitted to low oxygen concentration (0.75 mg/L). During the experimental period, four diets containing 0, 10, 20 and 30% of lyophilized bovine colostrum (CBL) (with 32% crude protein) were given twice daily (considering quadruplicates for each diet). Before the beginning and the end of each experiment, the biometric parameters of biomass and length were analyzed in each batch for performance analyses. Eight juveniles for the experimental situation of densification and ten juveniles for hypoxia of each treatment were anesthetized with benzocaine and blood samples were collected from the caudal vein for the hematological analysis. Erythrogram, leukogram (total and differential counts of leukocytes), hematocrit and hematimetric indexes were performed. The serum immunoglobulins of the pacu juveniles were quantified by the Zinc Sulfate Turbid (ZST) method, which was standardized for fish in this study. Juveniles pacu were distributed in a completely randomized experimental design for cronic stress experiment, and for acute stress in randomized blocks, both with four treatments. Data were submitted to the \"General Linear Model\"procedure (PROC GLM) of the statistical program SAS (1989). For a mean-to-average assessment, contrasts were performed between pairs of means using the Tukey method, where a probability of 5% (P <0.05) was considered No influence of bovine colostrum was observed on performance and hematological variables analyzed in both experimental situations, chronic and acute stress. However, for the experimental situation of acute stress, the addition of CBL to the diet of pacu influenced the number of special granulocytic cells, and the group that received 0% CBL presented lower number of cells than the group that received 10% CBL, as well as the number of monocytes. The group that received 20% of CBL presented lower number of monocytes than the group that received 30% of CBL in the diet (P <0.05). Although bovine colostrum did not influence the hematological variables analyzed, there was no negative effect on this source of heterologous protein supplied to the fish, since the performance of the animals that received the compound in the diet was similar to the animals that received diet without this milk secretion. Considering theresults, lyophilized bovine colostrum, a rich source of bioactive molecules, does not contribute to the protection of juvenile pacu subjected to high stocking density and low oxygenation.

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