Der Einzeller Eimeria tenella zählt zu den hochpathogenen Parasiten des Haushuhns und ist Verursacher der Blinddarm-Kokzidiose, eine Erkrankung, die zu hohen ökonomischen Belastungen in der Geflügelindustrie führt. Zur Zeit existiert noch kein Impfstoff, der auf Basis von einzelnen Antigenen wirksam ist. Insbesondere die Identifizierung und Charakterisierung von sekretorischen Proteinen, welche an der Parasit-Wirtszell-Interaktion beteiligt sind, könnte einen Beitrag zur Entwicklung einer Immunprophylaxe darstellen. Ziel dieser Arbeit war es, sekretorische E. tenella-Proteine zu identifizieren und ausgewählte cDNA-Sequenzen in DNA-Immunisierungsstudien zu überprüfen. Um ein DNA-Immunisierungsprotokoll für Hühner zu erarbeiten, wurden die cDNAs von drei schon bekannten E. tenella-Antigenen alleine oder in Fusion zur cDNA des stabilisierenden enhanced green fluorescence protein (EGFP) in zwei unterschiedliche DNA-Immunisierungsvektoren (pCDNA3, pVR1012) kloniert. Die Überprüfung der Serokonversion zeigte, dass nach DNA-Immunisierung von Hühnern mit beiden Vektoren bzw. mit und ohne EGFP-Fusion vergleichbare Immunantworten induziert wurden. D.h. mit dem etablierten DNA-Immunisierungsprotokoll konnte eine Expression heterologer (Eimerien) Gene im Huhn erzielt werden. Um neue sekretorische E. tenella-Proteine zu identifizieren wurden bioinformatische und experimentelle Methoden eingesetzt. Über die bioinformatischen Analysen wurden aus E. tenella-expressed sequence tag (EST)-Datenbanken 54 putativ sekretierte E. tenella-Sequenzen extrahiert für die aufgrund ihrer beschriebenen Funktion und Lokalisierung eine Beteiligung an der Wirts-Parasit-Interaktion abgeleitet wurde. Mittels funktioneller Komplementierung in Hefen konnten aus einer E. tenella-Sporozoiten-cDNA-Bank 25 sekretorische Sequenzen identifiziert werden. Die cDNA-Sequenzen von 13 neu identifizierten sekretorischen Proteinen wurden in DNA-Immunisierungsstudien überprüft. Die Ergebnisse zeigten, dass beide Methoden geeignet sind, um sekretorische Proteine von E. tenella zu identifizieren. Aufgrund der Erkenntnisse dieser Arbeit, sollten jedoch weitere verbesserte Immunisierungsprotokolle erarbeitet werden, um die immunprotektive Wirkung der isolierten Kandidaten-Antigene von E. tenella in Hühnern zu überprüfen. Wie die vorliegende Arbeit bestätigt, eignet sich die Methode der DNA-Immunisierung vermutlich als Grundlage solcher Verfahren, wobei zukünftig die Induktion der essentiellen intestinalen Immunantwort im Vordergrund stehen sollte. / The protozoan parasite Eimeria tenella is highly pathogenic in chickens and causes caecal coccidosis that contribute to high economic losses in poultry farming. At the moment no vaccine based on a single antigen is available. The identification and characterization of proteins that are involved in host parasite interaction could particularly contribute to the development of immunoprophylactic control strategies. In order to establish a DNA immunisation protocol, cDNA of three already known E. tenella antigens were subcloned alone or in fusion to the stabilising fusion partner enhanced green flurescence protein (EGFP) into two different DNA immunisation vectors (pCDNA3, pVR1012). Following DNA immunisation of chickens using both vectors with or without EGFP fusion, respectively, the induction of comparable immune responses were shown by serum conversion. This implies it was possible to achieve heterologous (Eimeria) gene expression in chickens with the established immunisation protocol. In order to identify new E. tenella secretory proteins bioinformatic and experimental approaches were used. Following bioinformatic analysis 54 putatively secretory E. tenella sequences were identified for which roles in host parasite interaction were surmised, due to their localisation and function. The identification of secreted proteins from a E. tenella sporozoite cDNA library using a functional complementation assay in yeast resulted in 25 unique sequences. The cDNA of 13 newly identified secretory proteins were tested in DNA immunisation studies. The results showed that both methods are capable of identifying secretory proteins of E. tenella. Owing to the results presented here, new immunisation protocols should be established to test the immune protective capacity of candidate antigens of E. tenella in chickens. The present study confirmed the method of DNA immunisation as a basic tool for such new protocols. In future, however, DNA immunisation protocols should focus on the induction of essential intestinal immune responses.

INTRODUÇÃO: O câncer de ovário é o mais letal de todos os cânceres ginecológicos e requer ser tratado por ginecologistas especializados em centros terciários para se obter melhor prognóstico. Este trabalho tem como objetivo analisar e comparar quatro estratégias diferentes para predizer a benignidade ou malignidade de tumores pélvicos supostamente de origem ovariana utilizando para este fim, marcadores tumorais CA 125 e HE4, índice de risco de malignidade (IRM) e algoritmo ROMA. MÉTODOS: Neste estudo prospectivo foram avaliadas 128 pacientes com diagnóstico de tumores pélvicos supostamente de origem ovariana atendidas na Divisão de Clínica Ginecológica do Hospital das Clinicas da Faculdade de Medicina da Universidade de São Paulo e Instituto do Câncer do Estado de São Paulo entre julho de 2008 e janeiro 2011. Foram calculadas a sensibilidade e a especificidade e construídas curvas ROC para comparar os quatro parâmetros (CA 125, HE4, ROMA e IRM) na eficácia de diferenciar tumores ovarianos. RESULTADOS: A sensibilidade obtida para CA 125, HE4, ROMA e IRM foi de, respectivamente, 70,4%, 79,7%, 74,1% e 63,0%. A especificidade para CA 125, HE4, ROMA e IRM foi de, respectivamente, 74,2%, 66,7%, 75,8% e 92,4%. Não houve diferença na comparação das áreas abaixo da curva ROC entre os quatro parâmetros. CONCLUSÕES: Nenhum dos quatro métodos estudados é o ideal na diferenciação de tumores ovarianos. Entre os quatro parâmetros analisados o HE4 foi o parâmetro com melhor sensibilidade na diferenciação de tumores ovarianos. A acurácia dos quatro métodos é equivalente e podem ser utilizados indistintamente para referenciar pacientes para serviços especializados no tratamento de câncer de ovário / BACKGROUND: Ovarian cancer is the most lethal of all gynecological cancers and requires to be treated by gynecologic oncologists in tertiary centers accustomed to treating this disease to achieve the best prognosis. This study aims to compare four different strategies to predict the benignity or malignancy of pelvic tumors presumably of ovarian origin using, for this purpose, tumor markers CA 125 and HE4, risk malignancy index (RMI) and algorithm ROMA. METHODS: This prospective study evaluated 128 patients supposedly with ovarian tumors treated at the Divisão de Clínica Ginecológica do Hospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo and at Instituto do Câncer do Estado de São Paulo between July 2008 and January 2011. We calculated sensitivity, specificity and ROC curves to compare the four parameters (CA 125, HE4, ROMA and RMI) ability to differentiate the ovarian tumors. RESULTS: The sensitivity obtained for CA 125, HE4, ROMA and RMI was, respectively, 70.4%, 79.7%, 74.1% and 63.0%. The specificity obtained for CA 125, HE4, ROMA and RMI was, respectively, 74.2%, 66.7%, 75.8% and 92.4%. There was no difference the areas under the ROC curve among the four parameters. CONCLUSIONS: None of the four studied methods is best in the differentiation of ovarian tumors. Among the four parameters analyzed, HE4 was the parameter with highest sensitivity in the differentiation of ovarian tumors. The accuracy of the four methods is equivalent and can be used interchangeably to refer patients for specialized services in the treatment of ovarian cancer

INTRODUÇÃO: O câncer de ovário é o mais letal de todos os cânceres ginecológicos e requer ser tratado por ginecologistas especializados em centros terciários para se obter melhor prognóstico. Este trabalho tem como objetivo analisar e comparar quatro estratégias diferentes para predizer a benignidade ou malignidade de tumores pélvicos supostamente de origem ovariana utilizando para este fim, marcadores tumorais CA 125 e HE4, índice de risco de malignidade (IRM) e algoritmo ROMA. MÉTODOS: Neste estudo prospectivo foram avaliadas 128 pacientes com diagnóstico de tumores pélvicos supostamente de origem ovariana atendidas na Divisão de Clínica Ginecológica do Hospital das Clinicas da Faculdade de Medicina da Universidade de São Paulo e Instituto do Câncer do Estado de São Paulo entre julho de 2008 e janeiro 2011. Foram calculadas a sensibilidade e a especificidade e construídas curvas ROC para comparar os quatro parâmetros (CA 125, HE4, ROMA e IRM) na eficácia de diferenciar tumores ovarianos. RESULTADOS: A sensibilidade obtida para CA 125, HE4, ROMA e IRM foi de, respectivamente, 70,4%, 79,7%, 74,1% e 63,0%. A especificidade para CA 125, HE4, ROMA e IRM foi de, respectivamente, 74,2%, 66,7%, 75,8% e 92,4%. Não houve diferença na comparação das áreas abaixo da curva ROC entre os quatro parâmetros. CONCLUSÕES: Nenhum dos quatro métodos estudados é o ideal na diferenciação de tumores ovarianos. Entre os quatro parâmetros analisados o HE4 foi o parâmetro com melhor sensibilidade na diferenciação de tumores ovarianos. A acurácia dos quatro métodos é equivalente e podem ser utilizados indistintamente para referenciar pacientes para serviços especializados no tratamento de câncer de ovário / BACKGROUND: Ovarian cancer is the most lethal of all gynecological cancers and requires to be treated by gynecologic oncologists in tertiary centers accustomed to treating this disease to achieve the best prognosis. This study aims to compare four different strategies to predict the benignity or malignancy of pelvic tumors presumably of ovarian origin using, for this purpose, tumor markers CA 125 and HE4, risk malignancy index (RMI) and algorithm ROMA. METHODS: This prospective study evaluated 128 patients supposedly with ovarian tumors treated at the Divisão de Clínica Ginecológica do Hospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo and at Instituto do Câncer do Estado de São Paulo between July 2008 and January 2011. We calculated sensitivity, specificity and ROC curves to compare the four parameters (CA 125, HE4, ROMA and RMI) ability to differentiate the ovarian tumors. RESULTS: The sensitivity obtained for CA 125, HE4, ROMA and RMI was, respectively, 70.4%, 79.7%, 74.1% and 63.0%. The specificity obtained for CA 125, HE4, ROMA and RMI was, respectively, 74.2%, 66.7%, 75.8% and 92.4%. There was no difference the areas under the ROC curve among the four parameters. CONCLUSIONS: None of the four studied methods is best in the differentiation of ovarian tumors. Among the four parameters analyzed, HE4 was the parameter with highest sensitivity in the differentiation of ovarian tumors. The accuracy of the four methods is equivalent and can be used interchangeably to refer patients for specialized services in the treatment of ovarian cancer

Fascioloides magna (the giant liver fluke) originated from North America, is known in the Czech Republic since 1930s. This pathogenic fluke invades mostly cervids, but livestock too. Excretory-secretory products (ES products) contain number of esential biomolecules which are produced by excretory and secretory system of the fluke. These molecules play key role in many biological process during the life cycle not only of fascioloid flukes (e.g. migration in the host tissues, immune evasion and digestion). Due to their antigenic properties they could be also used in immunodiagnostics. Excretory-secretory proteins from adult Fascioloides magna and comparative related species Fasciola hepatica were purified and separated by the basic biochemical methods (1D, 2D electrophoresis, ion-exchange chromatography) and their activity was confirmed by specific (fluorogenic peptide) and nonspecific (gelatine) substrates. By using the mass spectrometry methods (MALDI TOF/TOF), the most abundant peptidolytically active proteins from ES products of F. magna were identified as cathepsin L (FmCL). Recombinant analog of FmCL was expressed in Pichia pastoris expression system. The peptidolytic activity was again confirmed using the synthetic fluorogenic substrates; the specifity of recombinant FmCL active site was...

Text in English / Corridor disease is an economically important tick-borne disease of cattle in southern Africa. The disease is caused by Theileria parva and transmitted by the vectors, Rhipicephalus appendiculatus and R. zambeziensis. There is currently no vaccine to protect cattle against T. parva that is permitted in South Africa. To develop recombinant anti-tick vaccines against Corridor disease, comprehensive databases of genes expressed in the tick’s salivary glands are required. Therefore, in Chapters 2 and 3, mRNA from the salivary glands of R. appendiculatus and R. zambeziensis was sequenced and assembled using next generation sequencing technologies. Respectively, 12 761 and 13 584 non-redundant protein sequences were predicted from the sialotranscriptomes of R. appendiculatus and R. zambeziensis and uploaded to public sequence domains. This greatly expanded the number of sequences available for the two vectors, which will be invaluable resources for the selection of vaccine candidates in future. Further, in Chapter 3, differential gene expression analysis in R. zambeziensis revealed dynamic expression of secretory protein transcripts during feeding, suggestive of stringent transcriptional regulation of these proteins. Knowledge of these intricate expression profiles will further assist vaccine development in future. In Chapter 4, comparative sialotranscriptomic analyses were performed between R. appendiculatus and R. zambeziensis. The ticks have previously shown varying vector competence for T. parva and this chapter presents the search for correlates of this variance. Phylogenetic analyses were performed using these and other publically available tick transcriptomes, which indicated that R. appendiculatus and R. zambeziensis are closely related but distinct species. However, significant expression differences were observed between the two ticks, specifically of genes involved in tick immunity or pathogen transmission, signifying potential bioinformatic signatures of vector competence. Furthermore, nearly four thousand putative long non-coding RNAs (lncRNAs) were predicted in each of the two ticks. A large number of these showed differential expression and suggested a potential transcriptional regulatory function of lncRNA in tick blood feeding. LncRNAs are completely unexplored in ticks. Finally, in Chapter 5, concluding remarks are given on the potential impact the R. appendiculatus and R. zambeziensis sialotranscriptomes may have on future vaccine developments and some future research endeavours are discussed. / Life and Consumer Sciences / Ph. D. (Life Sciences)