Soil organic matter (SOM) is the terrestrial biosphere's largest pool of organic carbon (C) and is an integral part of C cycling globally. Soil organic matter composition typically can be traced directly back to the type of detrital inputs; however, the stabilization of SOM results as a combination of chemical recalcitrance, protection from microbial decomposition within soil structure, and organo-mineral interactions. A long-term manipulative field experiment, the Detrital Input and Removal Treatment (DIRT) Project, was established to examine effects of altering detrital inputs (above- vs. below-ground source, C and nitrogen (N) quantity, and chemical quality) on the stabilization and retention of SOM. Surface mineral soil was collected from two DIRT sites, Bousson (a deciduous site in western Pennsylvania) and H.J. Andrews (a coniferous site in the Oregon Cascade Mountains), to examine the influence of altering detrital inputs on decomposability and mean residence time of soil organic matter and different organic matter fractions. Soil organic matter was physically separated into light fraction (LF) and heavy fraction (HF) organic matter, by density fractionation in 1.6 g mL⁻¹ sodium polytungstate (SPT). Density fractionation in SPT resulted in the mobilization and loss of ~25% of total soil organic C and N during the physical separation and rinsing of fractions during recovery, which was also the most easily decomposed organic matter present in the bulk soil. At H.J. Andrews, this mobilized organic matter had a short mean residence time (MRT), indicating that it originated from fresh detrital inputs. In contrast, at Bousson, the organic matter mobilized had a long MRT, indicating that it originated from organic matter that had already been stabilized in the soil. Mean residence times of LF from Bousson varied widely, ~3 y from doubled litter and control plots and 78-185 y for litter removal plots, while MRT of HF was ~250 y and has not yet been affected by litter manipulations. Results from long term incubation of LF and HF material supported these estimates; respiration was greatest from LF of doubled litter and control plots and least from HF of litter removal plots. In contrast, MRT estimated for LF and HF organic matter from H.J. Andrews were similar to each other (~100 y) and were not affected by litter manipulation. These estimates were also supported by the incubation results; there was not a difference in cumulative respiration between detrital treatments or density fractions. The results from the coniferous site may be due to a legacy of historically large inputs of coarse woody debris on the LF and it may be decades before the signal of detrital manipulations can be measured. Alternatively, these highly andic soils may be accumulating C rapidly, yielding young HF ages and C that does not differ substantially in lability from coniferous litter-derived LF. The DIRT Project was intended to follow changes in soil organic matter over decades to centuries. As expected, manipulation of detrital inputs has influenced the lability and mean residence time of the light fraction before the heavy fraction organic matter; however, it will be on much more lengthy time scales that clear differences in organic matter stabilization in response to the alteration of detrital inputs will emerge. Soil CO₂ efflux is a compilation of CO₂ from many sources, including root respiration and the decomposition of different organic matter fractions, roots, and exudates. If the sources of CO₂ have different isotopic signatures, the isotope analysis of CO₂ efflux may reveal the dominant sources within the soil profile. In a short incubation experiment of density fractions from both sites, respired CO₂ reflected the isotopic signature of the organic matter fraction after 30 days, but was more enriched in ¹³C. Initially CO₂ was isotopically depleted in ¹³C relative to the organic matter fraction and the period of depletion related to the amount of easily degraded organic matter present at H.J. Andrews only. / Graduation date: 2006

[Truncated abstract] Spontaneous plant growth and soil development occur at disturbed sites with their extent and nature being variously affected by soil fertility status, local climate and topographic conditions. Soil-plant interactions can be diverse and site-specific within a disturbed landscape. The main purpose of the present study is to evaluate soil characteristics and landscape indices in relation to natural plant growth and soil development under different conditions and for diverse materials. A comprehensive study has been carried out to evaluate spontaneous soil development and plant colonization on various regolith materials at a railway cutting near Jarrahdale bauxite mine and on various substrates comprising waste rock, weathered regolith and replaced topsoil at Scotia (Norseman, Western Australia) and Kelian (East Kalimantan, Indonesia). At Jarrahdale soil development has occurred slowly over 36 years in relation to morphological changes in surface horizons. Soils at several locations exhibit substantial changes in color, texture and structure. The slow soil development is primarily due to low biomass and litter contributions (˜1 Mg/ha) from colonizing plants (e.g. Dryandra sessilis, Eucalyptus marginata and low shrubs) on the cutting shelf and slow litter decomposition. Nutrient accumulation is up to 5 kg N/ha, and 0.5 kg/ha for P and K. Surface soil samples from Jarrahdale are generally acidic (pH < 5.1) and contain low concentrations of total soil carbon (20 g/kg) and nutrients of total nitrogen (0.73 g/kg), bicarbonate-extractable phosphorus (bic-P) (< 2 mg/kg), bic-K (37 mg/kg) and total exchangeable bases (<1.1 cmol/kg, with 24 % base saturation). Soil properties at the Scotia waste dump are mainly associated with alkaline (mean pH = 9) and saline conditions (EC1:5 = 1.01 dS/m). Exchangeable base values are high with average concentrations of exchangeable Ca of 18 cmol/kg and exchangeable Mg of 6 cmol/kg, thus these elements are not a limiting factor for plant nutrition. Patchy plant growth on the waste dump is mostly related to differences in water availability in the arid region and to salinity such that halophytes (saltbushes Maireana and Atriplex) colonize many parts of the waste dump together with some Melaleuca and Eucalyptus species

Master of Science / Department of Biology / John M. Blair / Anthropogenic activities impact ecosystems in numerous direct and indirect ways, affecting the cycling of carbon (C) and nitrogen (N) on local, regional and global scales. North America tallgrass prairie is an ecosystem profoundly altered by anthropogenic activities, with most native prairie converted to alternate land uses or heavily impacted by other environmental changes. While aboveground responses to anthropogenic drivers have received much attention, the responses of belowground biota, ecological processes, and nutrient allocation to land management and environmental change are poorly documented, especially over long timeframes. This research builds upon a long-term experiment (the Belowground Plot Experiment) initiated in 1986 at Konza Prairie Biological Station (Manhattan, KS). I utilized a subset of treatments to address the effects of annual burning vs. fire suppression and/or chronic N additions on soil C and N dynamics and microbial communities in tallgrass prairie. I measured a suite of soil variables related to C and N cycling during the 2012 growing season, including total soil C and N, microbial biomass C and N, in situ net N mineralization, potential N mineralization, in situ CO2 efflux, and potentially mineralizable soil C. I also assessed changes in microbial community composition using microbial phospholipid fatty acids (PLFA) profiles. Annual burning significantly (p≤0.05) increased the soil C:N ratio and in situ CO2 efflux, while decreasing potential ammonification and nitrification rates. Annual burning also increased total PLFA mass and relative abundance of fungi. Chronic N addition (100 kg N ha-1 year-1) significantly reduced the soil C:N ratio, while increasing total soil N and potential nitrification and ammonification rates. Chronic N addition reduced potential C mineralization, microbial biomass C and N, and altered microbial community composition by increasing abundance of bacterial PLFAs and reducing fungal PLFAs. Sampling date also significantly affected many variables. These results indicate that different fire regimes and chronic N enrichment over decades affects soil C and N pools and transformations, as well as microbial biomass and composition. In total, this study highlights the importance of long-term ecological research and identifies likely changes in tallgrass prairie nutrient dynamics and soil microbial communities under increased N and frequent burning.

1. For the first time detailed phytosociological measurements, using objective methods have been made in a large number of lowland successional stands throughout eastern Canada. 2. Soil and soil surface organic matter samples were collected on a volume-weight basis for all stands studied. An increased use of bulk-density sampling methods is advocated as they allow the conversion of all nutrient percentage and parts per million analyses to actual weights par unit area profile depth, as was done in the present work. [...]

Thesis (doctoral)--Swedish University of Agricultural Sciences, 2007. / Thesis documentation sheet inserted. Includes appendix of four papers and manuscripts, three co-authored with others. Includes bibliographical references. Also issued electronically via World Wide Web in PDF format; online version lacks appendix.

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Made available in DSpace on 2014-08-20T14:33:01Z (GMT). No. of bitstreams: 1 dissertacao_greice_de_almeida_schiavon.pdf: 2595058 bytes, checksum: b92d92d5c319dfe3fef953ccaf262aed (MD5) Previous issue date: 2012-12-12 / This study was conducted on Estação Experimental Cascata, Embrapa Clima Temperado, in Pelotas, and on one family farm, in Morro Redondo. The objective of the study was to evaluate the scientific and local knowledge about the influences of management practices on soil fauna in ecological production systems. The methodology for samples of soil fauna, in each season, was done using the TSBF (Tropical Soil Biology and Fertility). Local knowledge was assessed using semi-structured interviews. The data analysis was done using th ecological indices as explanatory tools, and also the multivariate analysis (Principal Component Analysis - PCA) to evaluate the influence of management practices on soil fauna. In the first chapter, the ecological horticultural production systems cultivated under laminar composting with manure (CE) and mulch on the soil (CM), at Embrapa, showed the best values of soil fauna diversity, while treatment with frequent soil mechanization (MF) obtained a strong correlation with enchytraeids in all seasons. In the second chapter, results from interviews showed that the studied family recognize the role of earthworms in soil and understand the influence of the soil practices on soil fauna. It s possible to conclude that local knowledge is a valuable contribution to scientific knowledge to assess the influence of management practices on soil fauna. Moreover, the treatments CE and CM demonstrated their importance for to maintaining the soil diversity and for decreasing the hand labor in ecological horticultural production systems. / Este trabalho foi desenvolvido na Estação Experimental Cascata, Embrapa Clima Temperado no município de Pelotas e em uma propriedade agrícola familiar no município de Morro Redondo. O objetivo geral do estudo foi avaliar o conhecimento local e acadêmico sobre as influências das práticas de manejo na fauna edáfica nos sistemas de produção de base ecológica. A metodologia para a coleta da fauna edáfica, a cada estação do ano, foi baseada no programa TSBF (Tropical Soil Biology and Fertility). O conhecimento local foi avaliado a partir de entrevista semiestruturada com a família agricultora. Para avaliação dos dados foram utilizados como ferramentas explicativas, os índices ecológicos, e a análise multivariada, conhecida como Análise de Componentes Principais (ACP) para correlação das influências das práticas de manejo na fauna edáfica. No primeiro capítulo foi possível observar no sistema de produção de base ecológica de hortaliças da Estação Experimental Cascata, que os tratamentos com compostagem laminar com esterco bovino (CE) e cobertura morta sobre o solo (CM) apresentaram os melhores valores de diversidade da fauna edáfica, enquanto o tratamento com mecanização frequente do solo (MF) obteve uma forte correlação com os enquitreídeos em todas as estações do ano. No segundo capítulo, realizado através de entrevista com a família agricultora, foi ressaltada a função das minhocas no solo, além da compreensão que as práticas de manejo influenciam a presença da fauna edáfica. Com isso, foi possível concluir que o conhecimento local é um importante aliado ao conhecimento acadêmico para avaliar a influência das práticas de manejo na fauna edáfica. Além disso, os tratamentos CE e CM demonstraram sua importância para a manutenção da diversidade do solo e diminuição da mão-de-obra nos sistemas de produção de base ecológica de hortaliças.

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Thesis (PhD (Botany and Zoology))—University of Stellenbosch, 2009. / ENGLISH ABSTRACT: Metal pollution is a problem of increasing global concern. It could arise from industrial activities, as well as pesticide use in agriculture, among other sources. For adequate protection of the soil ecosystem from metal toxicity, the bioavailability of metals must be properly evaluated. A plethora of soil factors affect the bioavailability of metals to soil organisms. These include pH, clay and organic matter contents, salinity among others. While much is known about the influence of some of these parameters, little is known on how clay content and salinity modify the bioavailability of metals to soil organisms. This study investigated the influence of clay content and salinity on partitioning, uptake and toxicity of two essential metals (Cu and Zn) to the earthworm Eisenia fetida in separate laboratory trials. Partitioning of the metals was evaluated with 0.01 M CaCl2, DTPA (di-ethylene-triamine-penta acetic acid), and nitric acid extractions. The metal content of worms was determined by acid digestion, while growth, cocoon production, and mortality were used as endpoints showing toxicity to metals and/or salinity. To test the validity of some of the laboratory results, a field study was undertaken, using the earthworm Aporrectodea caliginosa. Further, the study assessed the effect of salinity, using a battery of laboratory tests (acute, chronic and avoidance tests) with natural and/or artificial soils on four species of organisms (a collembolan Folsomia candida, a potworm Enchytraeus doerjesi and two earthworm species E. fetida and A. caliginosa), representing different feeding patterns and ecological roles in soil. Results showed that with increased clay content, there was increased availability of Cu in the substrate, and increased toxicity to E. fetida as shown by data for mortality and growth. The situation with Zn was less significant at sub-lethal concentrations but much so at lethal concentrations. DTPA and CaCl2 extracted metals revealed changes in partitioning of Cu and Zn with changes in clay content, but this trend was not always consistent. Both DTPA and CaCl2 revealed increased availability of Zn in substrates with increased salinity. Salinity had an additive to synergistic effect with Zn in toxicity to E. fetida. When combined with Cu, salinity also increased the availability of Cu as shown by CaCl2 extracted fraction, and had additive effect on toxicity of Cu to the earthworm. The field study did not succeed in in iv confirming the results of the laboratory study due to confounding role of flooding after heavy rainfall and subsequent leaching of salts and Cu. The results of the experiment on acute and chronic toxicity tests for NaCl on E. fetida showed LC50 of 5436 mg/kg NaCl and EC50 for growth and cocoon production of 4985 and 2020 mg/kg NaCl. These values showed that earthworms might be negatively affected in many soils containing fairly moderate concentrations of salts. Similarly, A. caliginosa could not survive in natural soil containing relatively low salt concentrations (EC = 1.62 dS/m) while reproduction was severely affected at lower EC value of 0.52 dS/m. F. candida and E. doerjesi could survive in the highest salinity soil (EC = 1.62 dS/m) used in this study but their reproduction was severely affected from 1.03 dS/m. Overall, it appears that of all the taxa used, earthworm species were the most sensitive to saline stress and could proof useful in determining ‘safe levels’ of salt in contaminated soils. The results of the avoidance test showed that A. caliginosa avoided both natural and artificial saline soil containing concentrations lower than those avoided by E. fetida. The conclusion is that the influence of clay content and salinity on the bioavailability of Cu and Zn depends largely on the metal in question, but generally speaking, bioavailability and toxicity of the metals were reduced with increased clay content while the opposite was true for salinity. If the species used in this study can be seen as fairly representative of a wide range of soil organisms, the conclusion is that salinisation of soil will be detrimental to most soil organisms at relatively low saline concentrations. Given the role of beneficial soil organisms in several soil processes which in turn contribute to soil fertility and sustainable use of land, it is recommended that any farming practices that may lead to an increase in salt content of agricultural soils should be discouraged. / AFRIKAANSE OPSOMMING: Metaalbesoedeling is ‘n probleem wat toenemende globale kommer veroorsaak. Dit kan ontstaan as gevolg van industriële aktiwiteite sowel as van plaagmiddelgebruik in die landbou en ander bronne.Ten einde die grondekostelsel genoegsaam te beskerm, moet die biobeskikbaarheid van metale ge-evalueer word. ‘n Verskeidenheid van grondfaktore be-invloed die biobeskikbaarheid van metale vir grondorganismes Hulle sluit onder andere in pH, klei, organiese inhoud en soutgehalte. Hoewel heelwat bekend is oor die rol van sommige van hierdie parameters, is min bekend oor hoe klei en soutgehalte die biobeskikbaarheid van metale vir grondorganismes kan modifieer. Hierdie studie het die invloed van kleiinhoud and soutgehalte op die verdeling/partisie, opname en toksisiteit van twee essensiële metale (Cu en Zn) vir die erdwurm Eisenia fetida in afsonderlike laboratoriumproewe ondersoek. Kompartementele verdeling van die metale is geevalueer deur middel van ekstraksie-metodes met 0.01 M CaCl2, DTPA (di-etileentriamien- penta asysnsuur), en salpertersuur ekstraksies. Die metaalinhoud van wurms is bepaal deur suurverterings en spektrofotometriese analises te doen terwyl groei, kokonproduksie en mortaliteit van organismes gebruik is as gevoeligheidseindpunte om toksisiteit van metale en soutgehalte aan te toon. Om die geldigheid van somige van die laboratoriumresultate te toets, is ‘n veldstudie ook onderneem met die erdwurm Aporrectodea caliginosa. Die effek van soutgehalte is verder ondersoek deur ‘n battery van laboratoriumtoetse met vier spesies (‘n kollembool Folsomia candida,’n potwurm Enchytraeus doerjesi en twee erdwurmspesies E. fetida en A. caliginosa), wat verskillende voedingspatrone verteenwoordig. Die resultate het getoon dat met toenmende klei-inhoud was daar ‘n toename in die beskikbaarheid van Cu vir opname vanuit die substraat, asook ‘n toename in toksisiteit vir E. fetida soos deur die gegewens vir mortaliteit en groei uitgewys. Die situasie met Zn was minder betekenisvol by subletale konsentrasies en selfs baie minder so by letale konsentrasies. DTPA en CaCl2 ge-ekstraheerde metale het veranderinge in die partisie/verdeling van Cu en Zn uitgewys met verandering in klei-inhoud, maar die tendens was nie altyd konstant nie. Beide DTPA en CaCl2 ekstraksie het toenemende beskikbaarheid van Zn in substrate uitgewys met toenemende soutinhoud. Soutinhoud het ‘n additiewe/toegevoegde tot sinergistiese vi toksisiteitseffek saam met Zn vir E. fetida. In kombinasie met Cu het soutgehalte ook die geskatte biobeskikbaarheid van Cu verhoog soos uitgewys deur die CaCl2, geekstraheerde fraksie, en het ‘n additiewe effek gehad op die toksisitiet van Cu vir die erdwurm. Die veldstudie kon nie die resultate van die laboratoriumstudie bevestig nie weens die belemmerende rol van vloede na swaar reënneerslae en daaropvolgende uitloging van soute en Cu. Die resultate van die eksperimentele ondersoek na die akute en chroniese effekte van NaCl op E. fetida het ‘n LC50 van 5436 mg/kg NaCl en EC50 vir groei en kokonproduksie van 4985 en 2020 mg/kg NaCl opgelewer. Hierdie waardes het aangetoon dat erdwurms moontlik negatief beinvloed kan word in baie gronde wat ‘n redelike gemiddelde konsentrasie van soute bevat. Soortgelyk kon A. caliginosa nie oorleef in natuurllike grond wat relatief lae soutkonsentrasies bevat het (EC=1.62 dS/m) nie terwyl voortplanting sterk ge-affekteer is by ‘n lae EC waarde van 0.52 dS/m. F. candida en E. doerjesi kon oorleef in die grond met die hoogste soutgehalte (EC= 1.62 dS/m) maar hulle voortplanting is ernstig geknou vanaf 1.03 dS/m. In geheel blyk dit dat van allle taksa wat gebruik is, erdwurms die sensitiefste was vir die stres wat deur soutgehalte veroorsaak is. Die kennis kan nuttig wees in die bepaling van “veilige vlakke” van sout in gekontamineerde gronde. Die resultate van die vermydingstoetse het getoon dat A. caliginosa beide natuurlike en kunsmatig versoute gronde vermy het by konsentrasies wat heelwat laer was as dié wat deur E. fetida vermy is Die gevolgtrekking is dat die invloed van klei en soutgehalte op die biobeskikbaarheid van Cu en Zn grootliks afhanklik is van die metale wat betrokke is en dat biobeskikbaarheid en toksisiteit normaalweg verminder het met verhoogde klei-inhoud, met die teenoorgestelde wat waar was in die geval van soutgehalte. Indien die spesies wat in die studie gebruik is beskou kan word as redelik verteenwoordigend van ‘n wye reeks van grondorganismes, is die gevolgtrekking dat versouting van gronde nadelig sal wees vir meeste grondorganismes, selfs by relatief lae soutkonsentrasies. In die lig van die rol wat nuttige grondorganismes speel in verskeie grondprosesse wat bydraend is tot grondvrugbaarheid en volhoubare gebruik van gronde, word dit aanbeveel dat enige boerderypraktyk wat mag lei tot verhoging van die soutinhoud van landbougronde ontmoedig moet word.

Submitted by (lucia.rodrigues@ufrpe.br) on 2017-03-16T12:53:24Z No. of bitstreams: 1 Eddy Enrique Barraza Andrion (1).pdf: 947495 bytes, checksum: aa5e0f6002d19bd71d54a71eae9dc237 (MD5) / Made available in DSpace on 2017-03-16T12:53:24Z (GMT). No. of bitstreams: 1 Eddy Enrique Barraza Andrion (1).pdf: 947495 bytes, checksum: aa5e0f6002d19bd71d54a71eae9dc237 (MD5) Previous issue date: 2009-07-31 / The cowpea (Vigna unguiculata L.) is one of the main crops in the Northeast of Brazil especially for the small farmers. The Fusarium wilt and Rhizoctonia canker caused by Fusarium oxysporum f.sp. tracheiphilum and Rhizoctonia solani, respectively are the cowpea diseases showing more frequency and intensity in the Northeast of Brazil. This work aimed to evaluate the natural suppressiveness of 66 soils of this region to the Fusarium wilt and Rhizoctonia canker, and to analyze the physical, chemical and biological characteristics of this soils associated with disease suppressiveness or conducivity. The evaluated soils were grouped from highly suppressive to highly conducive in relation to Fusarium wilt and Rhizoctonia canker severities. The main variables involved in Fusarium wilt suppressiveness were high levels of phosphorus and potassium, basal respiration (CO2 evolution) and indexes of microbial diversity and equitability. For Rhizoctonia canker important correlations were determined with levels of phosphorus, potassium and sodium, basal respiration and enzymatic activity of fluorescein diacetate. There was no correlation between physical factors and suppressiveness to Fusarium wilt, but it was possible to correlate the levels of sand, clay and silt with suppressiveness and/or conducivity of Rhizoctonia canker. Three soils previously classified as highly supressive to Rhizoctonia canker were evaluated in relation to eight strains and three inoculum densities of R. solani. There was significant difference among soils and strains in relation to levels of disease severity. In the three soils the severity levels induced by the strain CMM-1053 were similar to those observed in former studies. Most of the strains showed different behavior in relation to soils, except for CMM-1064 and CMM-1066. There was significant difference among disease severity levels and different inoculum densities. The three soils presented good stability in relation to the different R. solani strains, but the inoculum density may be a limiting factor in the implementation of the natural soil suppressiveness or the supressivity induction in conducive soils. / O caupi (Vigna unguiculata L.) é uma das culturas mais importantes da região Nordeste do Brasil, principalmente na economia de pequenos produtores rurais. A murcha-de-fusário e a rizoctoniose, causadas pelos fungos Fusarium oxysporum f.sp. tracheiphilum e Rhizoctonia solani, respectivamente, são as doenças mais freqüentes e de maior intensidade em caupi no Nordeste brasileiro. Esta tese teve como objetivos avaliar a supressividade natural de 66 solos do Nordeste brasileiro à murcha-de-fusário e rizotoniose do caupi, analisar as características físicas, químicas e biológicas dos solos associadas com a supressividade ou conducividade às doenças, bem como avaliar a estabilidade da supressividade de três solos à rizoctonose do caupi, considerando diferentes isolados e densidades de inóculo de R. solani. Em relação à severidade da murcha-de-fusário e da rizoctoniose do caupi, os solos avaliados foram agrupados desde fortemente supressivos a altamente conducivos. As principais variáveis envolvidas na supressividade da murcha-de-fusário foram elevados teores de fósforo e potássio, respiração basal (CO2 evoluído) e os índices de diversidade e eqüitabilidade microbiana. Para a rizoctoniose, foram determinadas correlações importantes com os níveis de fósforo, potássio e sódio, respiração basal e atividade enzimática de diacetato de fluoresceína. Não foram correlacionados fatores físicos com a supressividade à murcha-de-fusário, porém foi possível correlacionar os teores de areia, argila e silte com asupressividade e/ou conducividade da rizoctoniose. Três solos classificados como fortemente supressivos à rizoctoniose foram avaliados em relação a oito isolados e três densidades de inoculo de R. solani. Houve diferença significativa entre os solos e os isolados quanto aos níveis de severidade da doença. Nos três solos os níveis de severidade induzidos pelo isolado CMM-1053 foram similares aos verificados nos estudos prévios. A maioria dos isolados apresentou comportamentos diferente em função dos solos, com exceção dos isolados CMM-1064 e CMM-1066. Foi verificada diferença significativa entre os níveis de severidade da doença e as diferentes densidades de inoculo. Os três solos evidenciaram estabilidade em relação aos diferentes isolados de R. solani, porém a densidade de inóculo pode ser um fator limitante na implementação da supressividade natural dos solos ou da indução da supressividade em solos conducivos.