<p>Hypersonic flow conditions, such as temperature, pressure, and flow velocity, are challenging to measure on account of the extreme conditions experienced by a craft moving above Mach 5. At Mach 5, the temperature in stratospheric air behind a normal shock wave exceeds temperatures of 1,300 K, and as the craft speed increases, so does the temperature. At these temperatures and conditions, traditional measurement techniques such as thermocouples and pressure transducers either alter the flow path, affecting the measurement, or they do not survive the external conditions. As such, there is interest in investigating alternative ways to measure flow properties. This thesis focuses on the implementation of several optical measurement techniques designed to determine the flow temperature, density gradient, and flow velocity in a detonation driven shock tube. A detonation driven shock tube was chosen for the project as it reliably creates high-speed, low-density, gas flows that are reminiscent of hypersonic conditions. </p><p>The first optical measurement technique implemented was background oriented schlieren, a measurement technique that quantitatively provides density gradient data. Experimental data obtained at pressures up to 3,000 psia resulted in density gradients at the exit of the detonation tube in good agreement with the literature.</p><p>The detonation tube was also fitted with two fiber optic ports to gather chemiluminescence thermometry data. Both a Stellarnet Black-Comet spectrometer and a Sydor Ross 2000 streak camera were used to capture spectroscopic data at these ports, in order to determine the detonation speed and the rotational temperature of the intermediate OH* combustion products. The Stellarnet spectrometer did not have a fast enough data capture rate to gather reliable data. While the streak camera captured data quickly, we had difficulty gathering enough light from the combustion event and the gathered data was very noisy. The streak camera did however capture the time duration of the full combustion event, so if the fiber connector ports are improved this data taking method could be used in the future to gather rotational temperature data. Both measurement techniques provided some unintrusive measurements of high-speed flows, and improvements to the data taking system could provide much needed information on hypersonic flow conditions. </p>

Fluorescence lifetime imaging microscopy (FLIM) is an imaging modality that is able to provide key insights into subcellular processes. When used to measure Förster resonance energy transfer (FRET), for instance, it can discern protein-protein interactions and conformational changes. This kind of information is highly useful in the drug screening process in order to determine the effectiveness of drug leads and their mechanisms of action. FLIM has yet to be successfully translated to high-content screening (HCS) platforms due to the high throughput and fine temporal and spatial resolution requirements of HCS. Our prototype HCS FLIM system uses a time-resolving instrument called a streak camera to multiplex the FLIM scanning process, allowing for 100 confocal spots to be simultaneously scanned across a sample. There have been a few major advancements to the prototype. First the fiber array used to connect the fluorescence channels to the streak camera was characterized. Its alternating fiber delay scheme was successful in greatly reducing optical crosstalk between adjacent channels. Next, an optical beam scanner for parallel excitation beams was designed and implemented, greatly improving the possible scan speeds of the system. The streak camera was upgraded to a higher repetition rate sweep, and modifications to system components and reconstruction procedures were made to accommodate the new sweep unit. A single-photon avalanche diode array was also tested as a possible replacement for the streak camera, and was found to offer photon detection efficiency advantages. Finally, improvements were made to the excitation power and optical throughput of the system in order to reduce the required exposure time. These advances to the prototype system bring it closer to realizing the requirements of HCS FLIM, and provide a clear picture for future improvements and research directions. / Thesis / Doctor of Philosophy (PhD) / Fluorescent proteins are commonly used to tag subcellular targets so that they can easily be distinguished with a fluorescence microscope. While this can help visualize where different organelles and proteins are located in the cell, a great deal more information can be gained by measuring the fluorescence lifetime at each point in the sample, which is highly sensitive to the microenvironment. Fluorescence lifetime imaging microscopy (FLIM) has the potential to be a powerful technique for testing drug leads in the drug discovery process, although current FLIM systems are not able to provide the high throughput speeds and high temporal resolution required for drug screening. This thesis project has succeeded in improving a highly parallel FLIM microscope by reducing inter-channel crosstalk, implementing an optical scanner, improving power and optical throughput, and investigating future time-resolving instruments. This progress has brought the prototype setup closer to being used in a drug screening environment.

Les caméras à balayage de fente sont les instruments de détection directe de la lumière les plus précis en termes de résolution temporelle. Ces instruments sont capables de capturer des évènements de l’ordre de la picoseconde à un taux de répétition d’une centaine de mégahertz. Cependant, les performances de la caméra sont limitées par de nombreux phénomènes propres au fonctionnement de cette dernière mais aussi au système l’implémentant. Plusieurs effets dégradant la résolution temporelle sont étudiés. Le premier axe exploré concerne la synchronisation de la caméra avec l’évènement lumineux capturé. Cette investigation débouche sur le développement d’un discriminateur à fraction constante permettant de déclencher la caméra avec un jitter inférieur à 200 fs RMS. Une autre étude présente l’impact qu’ont le bruit d’amplitude et le bruit de phase des lasers usuellement utilisés avec la caméra sur sa synchronisation. Enfin une analyse des phénomènes intrinsèques à la photocathode de la caméra permet d’évaluer la variation du temps de transit des électrons dans celle-ci. / Streak cameras are the direct light detection instruments that are the best in terms of temporal resolution. Those instruments can capture picosecond light events at a hundred megahertz repetition rate. However their characteristics are limited by various phenomena specific to the camera and the implementing system. Several effects that affect the temporal resolution are studied. The first examined line deals with the synchronization of the camera with the studied light event. This inquiry led to the design of a constant fraction discriminator allowing a sub 200 fs RMS jitter triggering. Another study shows the impact of the usually used laser amplitude noise and phase noise on the system’s synchronization. Finally, an analysis of the camera’s photocathode intrinsic phenomena allows estimating the transit time variation of the electrons within the vacuum tube.

Le travail présenté dans cette thèse, s'inscrit dans le domaine d'étude de l'interaction des rayonnements ionisants avec les liquides polaires. Bénéficiant de l'accélérateur d'électrons picoseconde ELYSE, les études ont été menées en utilisant les techniques de la radiolyse impulsionnelle associées à la spectrophotométrie d'absorption résolue en temps dans le domaine de la picoseconde. Ce travail est réparti sur deux chapitres distincts. Le premier aborde l'étude la variation temporelle du rendement radiolytique de l'électron solvaté dans l'eau et les alcools simples. Grâce au système de détection original monté sur l'accélérateur ELYSE, composé d'une lampe flash spécialement conçue pour cette détection et d'une streak-camera utilisée pour la première fois en spectroscopie d'absorption, il a été possible d'enregistrer la totalité du déclin du rendement radiolytique de l'électron solvaté d'une façon continue dans un intervalle de temps allant de la dizaine de picoseconde à quelques centaines de nanoseconde. La capture de l'électron solvaté par le méthylviologène, a été mise à profit pour réévaluer le coefficient d'extinction molaire du spectre d'absorption de l'électron solvaté dans l'eau et l'éthanol à partir des points isobestiques qui apparaissent à l'intersection des spectres d'absorption de l'électron solvaté qui disparaît et du méthylviologène qui se forme au cours de la réaction.Le deuxième chapitre est consacré à l'étude des carbonates organiques liquides, tels que le diméthyle carbonate (DMC), le diéthyle carbonate (DEC) et le propylène carbonate (PC). Cette famille de carbonate qui n'a jamais été étudiée auparavant par radiolyse pulsée, entre dans la composition des électrolytes des batteries notamment au lithium. Les études ont été focalisées sur le PC au vu de ces caractéristiques physico-chimiques, notamment sa constante diélectrique très élevée (64) et son très fort moment dipolaire de 4,9 D. Les premiers résultats ont été obtenus d'abord sur des solutions aqueuses contenant du propylène carbonate afin d'observer les réactions de réduction et d'oxydation du PC par les espèces radiolytiques de l'eau (électron solvaté et radicaux OH). Puis après l'identification (spectrale et cinétique) de l'espèce formée par interaction avec le radical OH comme étant le radical PC* résultant de l'abstraction d'un H de la molécule de PC et l'espèce formée par interaction avec l'électron aqueux comme étant l'anion PC-, d'autres mesures ont été effectuées dans le liquide pur ainsi qu'en présence de certains intercepteurs d'électrons (biphényle, anthracène, naphtalène). Elles ont permis d'accéder au rendement radiolytique de PC- ainsi qu'à l'évaluation de son potentiel redox. Les premiers résultats sur le DEC et le DMC sont aussi exposés dans cette partie, portant dans un premier lieu sur le solvant pur et puis en présence de biphényle.

Ce travail de thèse a démontré la possibilité de mesurer la relaxation d’un complexe biomoléculaire ainsi que son hétérogénéité structurale, en associant la microfluidique et la fluorescence résolue en temps (FRT). Je présente de quelle façon la FRT permet d’obtenir une information sur la structure d’une molécule et comment on la mesure, notamment grâce à une caméra à balayage de fente. J’introduis ensuite la microfluidique de gouttes, permettant de mélanger deux réactifs en quelques millisecondes et de suivre la relaxation du complexe au cours de la propagation des micro-réacteurs. Puis, la mesure d’une cinétique avec un couple de molécules modèle démontre la preuve de principe, faisant l’objet d’un article soumis. Enfin la mesure de FRT par comptage de photons uniques dans des gouttes uniques est décrite. Elle ouvre une perspective d’application pour le criblage à haut débit : un brevet a été déposé. / This thesis has proven the feasibility of measuring the relaxation of a biomolecular complex as well as its structural heterogeneity, by associating microfluidics and time resolved fluorescence (TRF). I present in which way TRF allows for probing the structure of a molecule and how it is measured, in particular by using a streak camera. I then introduce droplet microfluidics, which enables to mix two reagents in a few milliseconds and to follow the relaxation of the complex, along propagation of the micro-reactors. Next, the measurement of a kinetics with test molecules validates the proof of concept, reported in a submitted article. Finally, the measurement of TRF by single photon counting in single droplets is described. It opens a perspective for an application in high-throughput screening: a patent has been registered.

Doctor of Philosophy / Department of Physics / Zenghu Chang / The first part of this thesis describes our novel design, test, and application of our X-ray streak camera to the pulse duration measurement of soft X-rays. We demonstrated a significant improvement in the resolution of the x-ray streak camera by reducing the electron beam size in the deflection plates. This was accomplished by adding a slit in front of the focusing lens and the deflection plates. The temporal resolution reached 280 fs when the slit width was 5 μm. The camera was operated in an accumulative mode and tested by using a 25 fs laser with 2 kHz repetition rate and 1-2% RMS pulse energy stability. We conclude that deflection aberrations, which limit the resolution of the camera, can be appreciably reduced by eliminating the wide-angle electrons. We also employed the same streak camera to demonstrate that it is capable of measuring the pulse duration of X-rays. We measured the pulse duration of X-rays emitted from Ni-like Ag and Cd grazing-incidence laser to be ~5ps. The measured value agrees with the prediction made by the model and the measurement made by changing the delay as a function of the pulse duration. The streak camera was also tested with various sources of X-ray such as high harmonics generation of soft x-rays from an argon atom using a high power Ti:sapphire laser source of KLS. The result of the measurement manifests its capability for serving as a detector in the study of ultrafast dynamics in the field of physics, chemistry, biology and medical sciences. The second part of this thesis describes our design of a spectrometer to study the effect of the Carrier envelope (CE) phase on polarization gated extreme-ultraviolet (XUV) super-continuum generation. Because the challenge of making single shot experiment possible is to generate a sufficient number of photons, our setup has been built to allow generation of high order harmonics at the maximum phase matched pressure. This is the first time to our knowledge that phase matching in the polarization gating process has been studied so far. We measured the maximum phase matching pressure to be ~ 55 Torr which is the pressure above which quadratic increase in intensity of the high harmonics spectrum ceases to appear. At this pressure the number of photons per laser shot was 104 which is sufficient for measuring the single shot XUV spectrum in the range 34 to 45 eV. The spectral profile was a super-continuum for some shots and discrete high harmonics for other shots. It is believed that the shot to shot variation of the spectra is due to the changes of the carrier envelope phase of the few-cycle laser pulses used for the polarization gating. An improved CE phase stabilization system in KLS further eliminated the statistical noise in our observation by allowing us to integrate data over several laser cycles for each CE phase value. The effect of CE phase on a polarization gated XUV spectrum was tested by changing the CE phase with two different methods. In the first method, the CE phase was changed by changing the thickness of fused silica plates on the beam path, and the result shows the shift in the spectral peak of the XUV when the gate width approached less than one optical cycle. As gate width was made less than half the optical cycle, the spectrum was observed with continuum harmonics separated by π radians. We believe that the presence of continuum and discrete harmonics spectra in the observation is due to single and double attosecond pulses generated in the polarization gating. In the second method the carrier-envelope phase of pulses from a grating-based chirped pulse amplification laser was varied smoothly to cover a 2π range by controlling the grating separation. The phase is measured simultaneously by an f-to-2f setup and by the variation of XUV spectra from polarization gated high harmonic generation. A very good similarity between the effect of single and double slits in Yong’s experiment and that of CE phase on the XUV spectrum in the polarization gating experiment has been found, giving better agreement with the theory. The effect of optical properties such as the Gouy phase shift on the polarization gated spectrum has also been studied in the course of investigating the best experimental optimizations to generate the most CE phase sensitive XUV spectrum with less statistical noise. This is the first time to our knowledge experimental study of the effect of the Gouy phase shift on a polarization gated XUV spectrum has been made.

<p dir="ltr">In recent years, nanosecond repetitively pulsed (NRP) plasma discharges have garnered significant interest due to their rapid generation of reactive excited-state species, reactive radicals, and localized heat release within nanosecond (ns) timescale. To effectively harness these plasmas for altering system-level thermal and chemical behavior, a thorough understanding of their governing physics is crucial. This knowledge enables the development of predictive plasma kinetic models for tailoring NRP plasmas to specific applications. However, achieving this requires high-fidelity experimental data to validate models and deepen our understanding of fundamental plasma physics. Advancing experimental spectroscopy and laser diagnostics methods is essential for probing such temporally highly dynamic and optically complex nonequilibrium environments. This includes developing novel <i>test platforms</i>, conducting <i>fundamental research</i> to address existing knowledge gaps, and constructing custom <i>ultrafast laser architectures</i> for probing plasma properties. </p><p dir="ltr">The pioneering development of Streak-based <i>test platform</i> in the diagnostics field of nanosecond pulsed plasmas and its successful application towards inferring the underlying ultrafast spatio-temporal evolution of nanosecond pulsed plasma discharges with an unprecedented time-resolution as short as ~25 ps is presented for the first time. Spectrally filtered, 1D line-imaging of nanosecond pulsed plasma discharges in a single-shot, jitter-free, continuously sweeping manner is obtained, and differences in discharge dynamics of air and N2 plasma environments are studied. Successive <i>test platform</i> advancement includes spectrally resolved Streak-spectroscopy measurements of thermal regime-transition evolution from early-nonequilibrium to local-thermal-equilibrium (LTE) to attain time-resolved quantitative insights into N2(C) state rotational/vibrational nonequilibrium temperatures, electron temperature/density, and spectral lifetime dynamics. </p><p dir="ltr">Ultrafast laser-based progression includes detailed <i>fundamental</i> investigation of higher-order optical nonlinearity perturbations of fs-EFISH by considering of – self-phase modulation induced spectral characteristic of fs-EFISH signal, calibration mapping during-below-and-beyond optical breakdown regime, optical Kerr effect consequences, impact of femtosecond (fs) laser seeding on the noninvasiveness of fs-EFISH, and spectral emission characteristics of fs laser filaments. To infer N2(X) state nonequilibrium of NRP pulsed plasmas, two hybrid fs/ps ro-vibrational coherent anti-Stokes Raman scattering (CARS) <i>ultrafast laser architectures</i> are developed. First architecture, single-laser-solution, reduces system’s energy budget by ~3 mJ/pulse for generating narrowband (~21 ps), high-energy (~420 μJ/pulse), 532 nm probe pulses through incorporation of custom built visible fs optical parametric amplifier (OPA) coupled with an Nd:YAG power amplifier module. The second architecture, two-laser-solution, improves system’s robustness through the development of a 1 kHz, 532 nm, high-energy (~600 μJ/pulse), low-jitter (<1 ps), narrowband (~27 ps), master-oscillator-power-amplification (MOPA) based picosecond probe pulse laser time-synchronized with fs master-oscillator. Single-shot, hybrid fs/ps narrowband ro-vibrational CARS demonstration in a combusting flame up to temperatures of ~2400 K is demonstrated. Experimental ro-vibrational CARS investigation includes polarization based nonresonant background suppression and demonstration of preferential Raman coherence excitation shift, a temperature sensitivity enhancing strategy for vibrationally hot mediums like nanosecond pulsed plasmas. Lastly, an ultrafast pulse-friendly optically accessible vacuum cell is designed and fabricated for controlled experiments of NRP fs/ps CARS. Special care is taken to prevent self-focusing and spectral-temporal chirp of fs CARS beams while maintaining Gaussian focusing beam caustic.</p>