This project offers a nature program that can be implemented into youth camp programs. Outdoor Residential Camp programs offered by youth organizations provide an outdoor camp experience for many children in the communty. Many offer participants resident summer camp programs which is a perfect venue for the outdoor experience. Children exposed to outdoor experiences develop a greater sense of responsibility to the natural environment around them. The schools are not doing enough to educate youth about the natural environment. This project was written specifically for the Azalea Trails Girl Scout Camp located in the San Jacinto Mountains of Southern California however, it could be adapted to be used at any residental camp setting.

The aim of the diploma thesis was to create the functional core of geographic information system (GIS) of hiking trails in the Eagle Mountains including the spatial analysis. The first part, more theoretical, is dedicated to the brief description of the theory and initial analysis before the particular creation of GIS. In the second part, more practical, the process of the respective task is described from the data collection to data editing, creating the core of GIS, spatial analysis and final visualization.

Cette thèse s'inscrit dans le cadre de la biologie des systèmes et porte plus particulièrement sur un problème relatif aux réseaux biologiques hétérogènes. Elle se concentre sur les relations entre le métabolisme et le contexte génomique, en utilisant une approche de fouille de graphes.Il est communément admis que des étapes enzymatiques successives impliquant des produits de gènes situés à proximité sur le chromosome traduisent un avantage évolutif du maintien de cette relation de voisinage au niveau métabolique ainsi que génomique. En conséquence, nous choisissons de nous concentrer sur la détection de réactions voisines catalysées par des produits de gènes voisins, où la notion de voisinage peut être modulée en autorisant que certaines réactions et/ou gènes soient omis. Plus spécifiquement, les motifs recherchés sont des trails de réactions (c'est-à-dire des séquences de réactions pouvant répéter des réactions, mais pas les liens entre elles) catalysées par des produits de gènes voisins. De tels motifs de voisinage sont appelés des motifs métaboliques et génomiques.De plus, on s'intéresse aux motifs de voisinage métabolique et génomique conservés, c'est-à-dire à des motifs similaires pour plusieurs espèces. Parmi les variations considérées pour un motif conservé, on considère l'absence/présence de réactions et/ou de gènes, ou leur ordre différent.Dans un premier temps, nous proposons des algorithmes et des méthodes afin d'identifier des motifs de voisinage métabolique et génomique conservés. Ces méthodes sont implémentées dans le pipeline libre CoMetGeNe (COnserved METabolic and GEnomic NEighborhoods). À l'aide de CoMetGeNe, on analyse une sélection de 50 espèces bactériennes, en utilisant des données issues de la base de connaissances KEGG.Dans un second temps, un développement de la détection de motifs conservés est exploré en prenant en compte la similarité chimique entre réactions. Il permet de mettre en évidence une classe de modules métaboliques conservés, caractérisée par le voisinage des gènes intervenants. / This thesis fits within the field of systems biology and addresses a problem related to heterogeneous biological networks. It focuses on the relationship between metabolism and genomic context through a graph mining approach.It is well-known that succeeding enzymatic steps involving products of genes in close proximity on the chromosome translate an evolutionary advantage in maintaining this neighborhood relationship at both the metabolic and genomic levels. We therefore choose to focus on the detection of neighboring reactions being catalyzed by products of neighboring genes, where the notion of neighborhood may be modulated by allowing the omission of several reactions and/or genes. More specifically, the sought motifs are trails of reactions (meaning reaction sequences in which reactions may be repeated, but not the links between them). Such neighborhood motifs are referred to as metabolic and genomic patterns.In addition, we are also interested in detecting conserved metabolic and genomic patterns, meaning similar patterns across multiple species. Among the possible variations for a conserved pattern, the presence/absence of reactions and/or genes may be considered, or the different order of reactions and/or genes.A first development proposes algorithms and methods for the identification of conserved metabolic and genomic patterns. These methods are implemented in an open-source pipeline called CoMetGeNe (COnserved METabolic and GEnomic NEighborhoods). By means of this pipeline, we analyze a data set of 50 bacterial species, using data extracted from the KEGG knowledge base.A second development explores the detection of conserved patterns by taking into account the chemical similarity between reactions. This allows for the detection of a class of conserved metabolic modules in which neighboring genes are involved.

Title: Development of Competencies in Scientific Education through the Active Work of Pupils (Focused On Field Trips) Abstract The overall concept and strategy of science education is undergoing significant changes, the basic starting curricula are designed to develop key competences necessary for personal development and success of each member of society. Therefore, in addition to traditional, perhaps best methods and forms come into the forefront more participatory and inquiry- based approaches that encourage creative approach to teaching and emphasize their own initiative pupils. Unique role of a comprehensive scientific excursion channeled to various locations in order to accomplish a pre- assigned tasks and sophisticated science and social character. A new look in this direction provide natural areas or nature trails where students can explore, understand and assess phenomena in a broader context with regard to their natural, economic or social importance. This direct and indirect nature study research methods, practical activities, especially experimental enables pupils to create complex scientific skills and competencies. It helps students develop the intellectual gradual transition from a predominantly illustrative exploring the world around to explore the rational, abstract. The issue is also...

Persistent condensation trails are clouds, induced by the exhaust of an aircraft engine in a cold and ice-supersaturated environment. These artificial ice clouds can both cool and heat the atmosphere by scattering solar radiation and absorbing terrestrial radiation, respectively. The influence of condensation trails on the Earth-atmosphere energy balance and therewith the answer to the question of the dominating process had been mostly approximated on a global scale by treating the condensation trail as plane parallel layer with constant optical properties. Individual condensation trails and the influence of the solar angle had been analyzed, always using a course spatial grid and never under consideration of the aircraft performance, generating the condensation trail. For a trajectory optimization, highly precise results of the impact of condensation trails on the radiation budget and the influence of the aircraft performance on this impact is needed, so that future air traffic may consider the main factors of flight performance on the environmental impact of condensation trails. That’s why, a model is developed in this thesis to continuously estimate the scattering and absorption properties and their dependence on the aircraft performance.:1 Introduction 3 1.1 Motivation 3 1.2 State of the art 5 1.3 Approach 6 2 Theoretical background 9 2.1 The Earth’s atmosphere 9 2.1.1 The mean vertical structure of the atmosphere 12 2.1.2 Standard atmospheres 14 2.2 Radiation 15 2.2.1 Nature of radiation 15 2.2.2 Important metrics describing radiation 17 2.2.3 Relevant spectra and principles of radiation 19 2.2.4 Solar radiation 20 2.2.5 Terrestrial radiation 21 2.2.6 Radiative transfer and extinction 22 2.2.7 Radiative transfer equation 30 2.2.8 Energy budget of the Earth-atmosphere system 32 2.3 Thermodynamics 33 2.3.1 Atmospheric stability 33 2.3.2 Turbulence 36 2.3.3 Conditions of contrail formation 41 3 Development of a radiative forcing model 45 3.1 Model atmosphere 45 3.2 Flight performance model 46 3.3 Atmospheric radiative transfer model 49 3.3.1 Two Stream Approximation 51 3.3.2 Discrete ordinate radiative transfer solver 52 3.3.3 Methods to calculate broadband radiances and irradiances 53 3.4 Contrail life cycle model 57 3.4.1 Dissipation regime 58 3.4.2 Diffusion regime 63 3.5 Contrail radiative forcing model 74 3.5.1 Consideration of multiple scattering using a Monte Carlo simulation 74 3.5.2 Geometry of the Monte Carlo simulation 75 3.5.3 Interpretation of Beer’s law 76 3.5.4 Procedure of the Monte Carlo simulation 79 3.5.5 The extinguished power per unit length contrail 87 3.5.6 Scattering and absorption efficiencies Qs, Qa and asymmetry parameters gHG 89 3.5.7 Calibration of the Monte Carlo simulation 94 4 Calculations 99 4.1 Contrail properties 99 4.1.1 Conditions of contrail formation 100 4.1.2 Initial dimensions at the end of the dissipation regime 101 4.1.3 Microphysical properties during the diffusion regime 103 4.2 Radiative transport up to the contrail 105 4.2.1 Solar direct and diffuse radiance 106 4.2.2 Terrestrial irradiance 107 4.3 Scattering and absorption properties of radiation within the contrail 109 4.3.1 Monte Carlo simulation for solar radiation 109 4.3.2 Monte Carlo simulation for terrestrial irradiances 112 4.3.3 Relevance of multiple scattering 116 4.4 Radiative extinction 116 4.4.1 Solar zenith and azimuthal angle 118 4.4.2 Flightpath 120 4.4.3 Contrail evolution 122 4.4.4 Turbulence 126 4.4.5 Wavelength specific extinction 129 4.5 Terrestrial energy forcing of a contrail 133 4.6 Verification 135 5 Conclusion and outlook 141 5.1 Conclusion 141 5.2 Outlook 144 List of Figures 147 List of Tables 151 Abbreviations and Symbols 153 Glossary 161 Bibliography 169 Acknowledgements 183 / Langlebige Kondensstreifen sind Eiswolken, welche durch Kondensation von Wasserdampf an Rußpartikeln in einer eisübersättigten Atmosphäre entstehen. Der Wasserdampf entstammt einerseits aus dem Triebwerkabgas und andererseits aus der Atmosphäre. Kondensstreifen können die Atmosphäre durch Rückstreuung solarer Strahlung kühlen und durch Rückstreuung und Absorption terrestrischer Strahlung erwärmen. Der Einfluss von Kondensstreifen auf den Wärmehaushalt der Atmosphäre und damit die Antwort auf die Frage nach dem dominierenden Effekt wurde bisher zumeist auf globaler Ebene ermittelt, wobei der Kondensstreifen als planparallele Schicht mit konstanten optischen Eigenschaften angenähert wurde. Individuelle Kondensstreifen und der Einfluss des Sonnenstandes wurden bisher nur mithilfe eines groben Rasters betrachtet und niemals unter Berücksichtigung der Flugleistung des Luftfahrzeuges, welches den Kondensstreifen generiert hat. Für eine Trajektorienoptimierung sind jedoch präzise Berechnungen des Strahlungseinflusses und eine gewissenhafte Berücksichtigung der Flugleistung notwendig. Nur so kann der zukünftige Luftverkehr die Haupteinflussfaktoren der Flugeigenschaften auf den Strahlungseinfluss der Kondensstreifen berücksichtigen. Aus diesem Grund wurde in dieser Arbeit ein Modell entwickelt, welches die Eigenschaften des Strahlungstransfers durch den Kondensstreifen kontinuierlich bestimmt und die aus der Flugleistung resultierenden Parameter berücksichtigt.:1 Introduction 3 1.1 Motivation 3 1.2 State of the art 5 1.3 Approach 6 2 Theoretical background 9 2.1 The Earth’s atmosphere 9 2.1.1 The mean vertical structure of the atmosphere 12 2.1.2 Standard atmospheres 14 2.2 Radiation 15 2.2.1 Nature of radiation 15 2.2.2 Important metrics describing radiation 17 2.2.3 Relevant spectra and principles of radiation 19 2.2.4 Solar radiation 20 2.2.5 Terrestrial radiation 21 2.2.6 Radiative transfer and extinction 22 2.2.7 Radiative transfer equation 30 2.2.8 Energy budget of the Earth-atmosphere system 32 2.3 Thermodynamics 33 2.3.1 Atmospheric stability 33 2.3.2 Turbulence 36 2.3.3 Conditions of contrail formation 41 3 Development of a radiative forcing model 45 3.1 Model atmosphere 45 3.2 Flight performance model 46 3.3 Atmospheric radiative transfer model 49 3.3.1 Two Stream Approximation 51 3.3.2 Discrete ordinate radiative transfer solver 52 3.3.3 Methods to calculate broadband radiances and irradiances 53 3.4 Contrail life cycle model 57 3.4.1 Dissipation regime 58 3.4.2 Diffusion regime 63 3.5 Contrail radiative forcing model 74 3.5.1 Consideration of multiple scattering using a Monte Carlo simulation 74 3.5.2 Geometry of the Monte Carlo simulation 75 3.5.3 Interpretation of Beer’s law 76 3.5.4 Procedure of the Monte Carlo simulation 79 3.5.5 The extinguished power per unit length contrail 87 3.5.6 Scattering and absorption efficiencies Qs, Qa and asymmetry parameters gHG 89 3.5.7 Calibration of the Monte Carlo simulation 94 4 Calculations 99 4.1 Contrail properties 99 4.1.1 Conditions of contrail formation 100 4.1.2 Initial dimensions at the end of the dissipation regime 101 4.1.3 Microphysical properties during the diffusion regime 103 4.2 Radiative transport up to the contrail 105 4.2.1 Solar direct and diffuse radiance 106 4.2.2 Terrestrial irradiance 107 4.3 Scattering and absorption properties of radiation within the contrail 109 4.3.1 Monte Carlo simulation for solar radiation 109 4.3.2 Monte Carlo simulation for terrestrial irradiances 112 4.3.3 Relevance of multiple scattering 116 4.4 Radiative extinction 116 4.4.1 Solar zenith and azimuthal angle 118 4.4.2 Flightpath 120 4.4.3 Contrail evolution 122 4.4.4 Turbulence 126 4.4.5 Wavelength specific extinction 129 4.5 Terrestrial energy forcing of a contrail 133 4.6 Verification 135 5 Conclusion and outlook 141 5.1 Conclusion 141 5.2 Outlook 144 List of Figures 147 List of Tables 151 Abbreviations and Symbols 153 Glossary 161 Bibliography 169 Acknowledgements 183

The risk of spread and establishment of invasive species to interior habitat within urban parks is of great concern to park managers and ecologists. Informal trails as a vector for this transmission are not well understood. To characterize effects of informal trails on understory plant communities, I conducted a study of the informal trail network in Forest Park, Portland, Oregon. The system of 382 informal trails was mapped and evaluated qualitatively, and from this population a systematic sample was selected for analysis. To identify hotspots of informal trail activity, showing the relationship of informal trails to formal trails, other park features, and trail use level, I evaluated all mapped trails using line density spatial analysis tools. To characterize understory communities, thirty transects were placed along informal trails, with paired transects along nearby formal trails for comparison. I measured percent cover by species for non-graminoid understory plants, and percent total plant cover at different structural layers, for quadrats at regular intervals from the trail edge. I calculated richness and Shannon-Weaver diversity for non-graminoid understory plants. For community analysis, species were grouped by dispersal strategy, native status, and growth form. Observations from system mapping suggest that "hidden" behaviors drive many informal trails: bathroom stops, party spots, waste dumping, and camps make up 28% of all informal trails. Trails to private property are few but represent over 29% of total trail length. Informal trail density is highest along Balch Creek. Hotspots of informal trail presence are associated with trailheads, trail intersections, and water access. Quadrats located within one meter of informal trails showed higher richness and diversity due to increased number of introduced and ruderal species. Formal trails exhibit these same patterns to a stronger degree and over a greater distance (two meters) from the trail edge. Distance from trail edge explained variation in plant communities when grouped by dispersal type, but not by growth form. This study shows that although informal trails are widely distributed throughout the park, they are concentrated in high use areas. The presence of informal trails leads to significant changes in Forest Park plant communities that favor invasive and ruderal species, but these effects appear limited to two meters from the trail edge.

Bicycle use is increasing in many parts of the U.S. Local and regional governments have set ambitious bicycle mode share goals as part of their strategy to curb greenhouse gas emissions and relieve traffic congestion. In particular, Portland, Oregon has set a 25% mode share goal for 2030 (PBOT 2010). Currently bicycle mode share in Portland is 6.1% of all trips. Other cities and regional planning organizations are also setting ambitious bicycle mode share goals and increasing bicycle facilities and programs to encourage bicycling. Increases in bicycle mode share are being encouraged to increase. However, cities with higher-than-average bicycle mode share are beginning to experience locations with bicycle traffic congestion, especially during peak commute hours. Today, there are no established methods are used to describe or measure bicycle traffic flows. In the 1960s, the Highway Capacity Manual (HCM) introduced Level of Service (LOS) measurements to describe traffic flow and capacity of motor vehicles on highways using an A-to-F grading system; "A" describes free flow traffic with no maneuvering constraints for the driver and an "F" grade corresponds to over capacity situations in which traffic flow breaks down or becomes "jammed". LOS metrics were expanded to highway and road facilities, operations and design. In the 1990s, the HCM introduced LOS measurements for transit, pedestrians, and bicycles. Today, there are many well established and emerging bicycle level of service (BLOS) methods that measure the stress, comfort and perception of safety of bicycle facilities. However, it was been assumed that bicycle traffic volumes are low and do not warrant the use of a LOS measure for bicycle capacity and traffic flow. There are few BLOS methods that take bicycle flow into consideration, except for in the case of separated bicycle and bicycle-pedestrian paths. This thesis investigated the state of BLOS capacity methods that use bicycle volumes as a variable. The existing methods were applied to bicycle facility elements along a corridor that experiences high bicycle volumes in Portland, Oregon. Using data from the study corridor, BLOS was calculated and a sensitivity analysis was applied to each of the methods to determine how sensitive the models are to each of the variables used. An intercept survey was conducted to compare the BLOS capacity scores calculated for the corridor with the users' perception. In addition, 2030 bicycle mode share for the study corridor was estimated and the implications of increased future bicycle congestion were discussed. Gaps in the BLOS methods, limitations of the thesis study and future research were summarized. In general, the existing methods for BLOS capacity are intended for separated paths; they are not appropriate for existing high traffic flow facilities. Most of the BLOS traffic flow methods that have been developed are most sensitive to bicycle volumes. Some of these models may be a good starting point to improve BLOS capacity and traffic flow measures for high bicycle volume locations. Without the tools to measure and evaluate the patterns of bicycle capacity and traffic flow, it will be difficult to monitor and mitigate bicycle congestion and to plan for efficient bicycle facilities in the future. This report concludes that it is now time to develop new BLOS capacity measures that address bicycle traffic flow.

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Recent research has emphasized the importance of rail-trails for various activity experiences and economic benefits. Past research has not, however, examined rail-trail opportunities with other trail opportunities in order to understand whether specific management efforts are needed for this type of setting and its users. This study investigated the differences between rail-trail users and general trail users with respect to socio-demographics (age, income, gender, income, community type), use characteristics (frequency of visitation, miles traveled to the site, group size, past experience with the area), expenditures (total and specific types), and trail/activity meanings (satisfaction, setting appraisals, place attachment, activity involvement, mode of experience). The study included a variety of camping and day-use areas within the Mount Rogers National Recreation Area. On-site interview and mail survey data were obtained from 235 trail respondents from May through October, 1993. Findings revealed few group differences with respect to socio-demographics and trail meanings. Use characteristics and expenditures, however, demonstrated differences as rail-trail users tended to be day-users who traveled shorter distances, participated in trail activities for fewer hours and within smaller groups, and tended to spend more on hotel accommodations and restaurants than general trail users. Management implications relate to assisting the economic base of local communities by attracting more non-local rail-trail users and encouraging them to stay longer in the region. Recommendations for further research suggest assessing benefits and motivations with respect to specific trail opportunities in order to reveal greater group differentiation. A discussion on the joint effects of variations in activities at the two trail settings is also addressed. / Master of Science