This work details the development of a computational tool that can accurately model strongly-coupled fluid-structure-interaction (FSI) problems, with a particular focus on thin-walled structures undergoing large, geometrically non-linear deformations, which has a major interest in, amongst others, the aerospace and biomedical industries. The first part of this work investigates improving the efficiency with which a stable and robust in-house code, Elemental, models thin structures undergoing dynamic fluid-induced bending deformations. Variations of the existing finite volume formulation as well as linear and higher-order finite element formulations are implemented. The governing equations for the solid domain are formulated in a total Lagrangian or undeformed conguration and large geometrically non-linear deformations are accounted for. The set of equations is solved via a single-step Jacobi iterative scheme which is implemented such as to ensure a matrix-free and robust solution. Second-order accurate temporal discretisation is achieved via dual-timestepping, with both consistent and lumped mass matrices and with a Jacobi pseudo-time iteration method employed for solution purposes. The matrix-free approach makes the scheme particularly well-suited for distributed memory parallel hardware architectures. Three key outcomes, not well documented in literature, are highlighted: the issue of shear locking or sensitivity to element aspect ratio, which is a common problem with the linear Q4 finite element formulation when subjected to bending, is evaluated on the finite volume formulations; a rigorous comparison of finite element vs. finite volume methods on geometrically non-linear structures is done; a higher-order finite volume solid mechanics procedure is developed and evaluated. The second part of this work is concerned with fluid-structure interaction (FSI) modelling. It considers the implementation and coupling of a higher order finite element structural solver with the existing finite volume fluid-flow solver in Elemental. To the author’s knowledge, this is the first instance in which a strongly-coupled hybrid finite element–finite volume FSI formulation is developed. The coupling between the fluid and structural components with non-matching nodes is rigorously assessed. A new partitioned fluid-solid interface coupling methodology is also developed, which ensures stable partitioned solution for strongly-coupled problems without any additional computational overhead. The solver is parallelised for distributed memory parallel hardware architectures. The developed technology is successfully validated through rigorous temporal and mesh independent studies of representative two-dimensional strongly-coupled large-displacement FSI test problems for which analytical or benchmark solutions exist. / Dissertation (MEng)--University of Pretoria, 2012. / Mechanical and Aeronautical Engineering / unrestricted

The increasing use of polymer-based materials (PBMs) across all types of industry has not been matched by sufficient improvements in understanding of polymer tribology: friction, wear, and lubrication. Further, viscoelasticity of PBMs complicates characterization of their behavior. Using data from micro-scratch testing, it was determined that viscoelastic recovery (healing) in sliding wear is independent of the indenter force within a defined range of load values. Strain hardening in sliding wear was observed for all materials-including polymers and composites with a wide variety of chemical structures-with the exception of polystyrene (PS). The healing in sliding wear was connected to free volume in polymers by using pressure-volume-temperature (P-V-T) results and the Hartmann equation of state. A linear relationship was found for all polymers studied with again the exception of PS. The exceptional behavior of PS has been attributed qualitatively to brittleness. In pursuit of a precise description of such, a quantitative definition of brittleness has been defined in terms of the elongation at break and storage modulus-a combination of parameters derived from both static and dynamic mechanical testing. Furthermore, a relationship between sliding wear recovery and brittleness for all PBMs including PS is demonstrated. The definition of brittleness may be used as a design criterion in selecting PBMs for specific applications, while the connection to free volume improves also predictability of wear behavior.

Case hardening distortions are a major problem for gear manufacturers. The aim of the current work is to create a simulation model, able to predict how and when case hardening distortions arise. The results presented in this thesis form a basis for such a model. Two case hardening steels, with base carbon contents of 0.20 and 0.21 % C were studied using dilatometer experiments. One of them was carburized to 0.36, 0.52 and 0.65 % C in order to investigate the influence of carbon content. Experiments were performed during both isothermal and continuous heating and cooling conditions. The results were used to evaluate phase transformations, heat expansion behaviors and phase transformation strains. The expansion behavior of the material was modeled as a function of temperature, carbon content and phase fractions. The phase transformations to martensite and bainite were modeled, using the Koistinen-Marburger equation and a transformation rate equation based on Austin-Rickett kinetics, respectively. Experiments were simulated using the COMSOL Multiphysics software, to verify the model with respect to martensite and bainite transformations, heat expansion behavior and phase transformation strains.

No description available.

Physiological Reports published by Wiley Periodicals, Inc. on behalf of the American Physiological Society and The Physiological Society. A volume-regulated anion channel (VRAC) has been electrophysiologically characterized in innumerable mammalian cell types. VRAC is activated by cell swelling and mediates the volume regulatory efflux of Cl− and small organic solutes from cells. Two groups recently identified the mammalian leucine-rich repeat containing protein LRRC8A as an essential VRAC component. LRRC8A must be coexpressed with at least one of the other four members of this gene family, LRRC8B-E, to reconstitute VRAC activity in LRRC8−/− cells. LRRC8 genes likely arose with the origin of chordates. We identified LRRC8A and LRRC8C-E orthologs in the zebrafish genome and demonstrate that zebrafish embryo cells and differentiated adult cell types express a swelling-activated Cl− current indistinguishable from mammalian VRAC currents. Embryo cell VRAC currents are virtually eliminated by morpholino knockdown of the zebrafish LRRC8A ortholog lrrc8aa. VRAC activity is fully reconstituted in LRRC8−/− human cells by coexpression of zebrafish lrrc8aa and human LRRC8C cDNAs. lrrc8aa expression varies during zebrafish embryogenesis and lrrc8aa knockdown causes pericardial edema and defects in trunk elongation and somatogenesis. Our studies provide confirmation of the importance of LRRC8A in VRAC activity and establish the zebrafish as a model system for characterizing the molecular regulation and physiological roles of VRAC and LRRC8 proteins.

Mouse hepatocytes respond to osmotic stress with adaptive changes in transmembrane potential, Vm, such that hypotonic stress hyperpolarizes cells and hypertonic stress depolarizes them. These changes in Vm provide electromotive force for redistribution of ions such as CI−, and this comprises part of the mechanism of hepatocyte volume regulation. We conducted the present study to determine whether ethanol administered in vitro to mouse liver slices increases hepatocyte water volume, and whether this swelling triggers adaptive changes in the Vm. Cells in mouse liver slices were loaded with tetramethylammonium ion (TMA). Changes in hepatocyte water volume were computed from measurements with Ion sensitive micro‐electrodes of changes in intracellular activity of TMA (a1TMA) that resulted from water fluxes. Ethanol (70 mM) increased hepatocyte water volume Immediately, and this peaked at 17% by 7 to 8 min, by which time a plateau was reached. Liver slices also were obtained from mice treated 12 hr prior with 4‐methylpyrazole (4 mM). The effect of ethanol on their hepatocyte water volume was identical to that from untreated mice, except that the onset and peak were delayed 2 min. Hepatocyte Vm showed no differences between control or ethanol‐treated cells during the course of volume changes. In contrast, hyposmotic stress, created by dropping external osmolality 50 mosm, increased Vm from –30 mV to –46 mV. Ethanol did not inhibit this osmotic stress‐induced hyperpolarization, except partially at high concentrations of 257 mM or greater. We infer that ethanol‐induced swelling of hepatocytes differs from that resulting from hyposmotic stress. Cellular events associated with increased activity of intracellular water most likely trigger the hyperpolarization of Vm that accompanies the latter. We conclude, therefore, that ethanol‐induced swelling occurs without change in cell water activity. This may result from the retention of macromolecules by ethanol in cells that constitutively secrete protein.

A loss of sarcolemmal dystrophin was observed by immuno-fluorescence studies in rabbit hearts subjected to in situ myocardial ischemia and by immuno-blotting of the Triton soluble membrane fraction of isolated rabbit cardiomyocytes subjected to in vitro ischemia. This ischemic loss of dystrophin was a specific event in that no ischemic loss of sarcolemmal α-sarcoglycan, γ-sarcoglycan, αDG, or βDG was observed. The maintenance of sarcolemmal βDG (43 Kd) during ischemia was interesting in that dystrophin binds to the C-terminus of βDG. However, during late in vitro ischemia, a 30 Kd band was observed that was immuno-reactive for βDG. Additionally, this 30 Kd-βDG band was observed in rabbit myocardium subjected to autolysis. Finally, the 30 Kd-βDG was observed in the purified sarcolemmal fraction of rabbit cardiomyocytes subjected to a prolonged period of in vitro ischemia, confirming the sarcolemmal localization of this band. The potential patho-physiologic significance of this band was indicated by the appearance of this band at 120-180 min of in vitro ischemia, directly correlating with the onset of irreversible injury, as manifested by osmotic fragility. Additionally the appearance of this band was significantly reduced by the endogenous cardioprotective mechanism, in vitro ischemic preconditioning, which delays the onset of osmotic fragility. In addition to dystrophin, βDG binds caveolin-3 and Grb-2 at its C-terminus. The presence of Grb-2 and caveolin-3 in the membrane fractions of oxygenated and ischemic cardiomyocytes was determined by Western blotting. An increase in the level of membrane Grb-2 and caveolin-3 was observed following ischemic preconditioning as compared to control cells. The formation of this 30 Kd-βDG degradation product is potentially related to the transition from the reversible to the irreversible phase of myocardial ischemic cell injury and a decrease in 30 Kd-βDG might mediate the cardioprotection provided by ischemic preconditioning.

The analysis of organic pollutants in water is traditionally done following EPA procedures which commonly use liquid-liquid extraction. One liter of water is extracted three times with 60 mL of an organic solvent. The extract is concentrated and analyzed by gas chromatography. This procedure is time consuming and can cause losses of semi-volatile components, in addition to requiring a relatively large amount of organic solvent (180 mL). By performing the extraction directly in a GC autosampler vial using one milliliter of contaminated water and one milliliter of organic solvent, then injecting a large volume (~150 mL) of the organic layer taken directly from the vial by an autosampler, the same analysis can be done simpler, quicker, and with much less organic solvent (1 mL). / Master of Science

L'analyse quantitative de volumes 3D obtenus par tomographie permet l’identification et la validation de modèles. La séquence d’analyse consiste en trois problèmes inverses successifs : (i) reconstruction des volumes (ii) mesure cinématique par corrélation d'images volumiques (DVC) et (iii) identification. Les très longs temps d’acquisition nécessaires interdisent de capter des phénomènes rapides. Une méthode de mesures, Projection-based Digital Volume Correlation (P-DVC), raccourcit la séquence précédente en identifiant les quantités clés sur les projections. Cette technique réduit jusqu'à 2 le nombre de radiographies utilisées pour le suivi de l’essai au lieu de 500 à 1000. Cette thèse étend cette approche en réduisant la quantité d’informations acquises, rendant ainsi accessibles des phénomènes de plus en plus rapides et repoussant les limites de la résolution temporelle. Deux axes ont ainsi été développés : - d’une part, l'utilisation de différentes régularisations, spatiales et temporelles des champs 4D (espace/temps) mesurés généralise la méthode P-DVC (avec volume de référence) à l'exploitation d’une seule radiographie par étape de chargement. L’essai peut désormais être réalisé de façon continue, en quelques minutes au lieu de plusieurs jours; - d’autre part, la mesure du mouvement peut être utilisée pour corriger le volume reconstruit lui-même. Cette observation conduit à proposer une nouvelle procédure de co-détermination du volume et de sa cinématique (sans prérequis), ce qui ouvre ainsi de nouvelles perspectives pour l’imagerie des matériaux et médicale où parfois le mouvement ne peut pas être interrompu. Le développement de ces deux axes permet d’envisager de nouvelles façons de réaliser les essais, plus rapides et plus centrés sur l’identification de quantités clés. Ces méthodes sont compatibles avec les récents développements « instrumentaux » de la tomographie rapide en synchrotron ou laboratoire, et permettent de réduire de plusieurs ordres de grandeurs les temps d’acquisition et les doses de rayonnement. / The quantitative analysis of 3D volumes obtained from tomography allows models to be identified and validated. It consists of a sequence of three successive inverse problems: (i) volume reconstruction (ii) kinematic measurement from Digital Volume Correlation (DVC) and (iii) identification. The required very long acquisition times prevent fast phenomena from being captured.A measurement method, called Projection-based DVC (P-DVC), shortens the previous sequence and identifies the kinematics directly from the projections. The number of radiographs needed for tracking the time evolution of the test is thereby reduced from 500 to 1000 down to 2.This thesis extends this projection-based approach to further reduce the required data, letting faster phenomena be captured and pushing the limits of time resolution. Two main axes were developed:- On the one hand, the use of different spatial and temporal regularizations of the 4D fields (space/time) generalizes the P-DVC approach (with a known reference volume) to the exploitation of a single radiograph per loading step. Thus, the test can be carried out with no interruptions, in a few minutes instead of several days.- On the other hand, the measured motion can be used to correct the reconstructed volume itself. This observation leads to the proposition of a novel procedure for the joint determination of the volume and its kinematics (without prior knowledge) opening up new perspectives for material and medical imaging where sometimes motion cannot be interrupted.end{itemize}The development of these two axes opens up new ways of performing tests, faster and driven to the identification of key quantities of interest. These methods are compatible with the recent ``hardware" developments of fast tomography, both at synchrotron beamlines or laboratory and save several orders of magnitude in acquisition time and radiation dose.

The importance of hypovolemia in dehydrational death was assessed in two anuran species. Xenopus laeyis, a species which experiences a significant reduction in circulating plasma volume with dehydration, was used to evaluate the role of sympathetic reflex compensation in hypovolemia. Adrenergic blockade with propranolol or phenoxybenzamine produced no significant reduction in dehydration tolerance in this species, although β-blockade with propranolol appeared to have a minor effect. The role of hypovolemic shock in the terminal circulatory collapse that precedes death in dehydrating anurans was investigated in the toad, Bufo marinus. The activity of lysosomal proteinases (cathepsins) was used as an indicator of the shock state. An assay was developed for the determination of cathepsin activity in toad plasma and was used to demonstrate the presence of proteinases similar in pH dependence to mammalian cathepsins Bl and D. Plasma cathepsin D-type activity increased with dehydration in toads but was not significantly different from the activity in controls or in toads subjected to splanchnic artery occlusion. Toads appear to maintain plasma volume to 20% water loss at the expense of other extracellular fluids. These results do not support the hypothesis that hypovolemia is a direct cause of dehydrational death in anurans.