Many organic compounds are released to the environment and can be harmful to living organisms. These compounds are often persistent and toxic. Some are mutagens, carcinogens, endocrine disruptors or they can cause an increase in bacterial resistance. They tend to accumulate in nature and their transformation is a long-term process. Therefore, various remediation techniques are needed for decontamination. Remediation and bioremediation processes depend on many factors which should be critically evaluated. This dissertation thesis studies the relationship between bioavailability, biodegradation and toxicity of polychlorinated biphenyls, polycyclic aromatic hydrocarbons and fluoroquinolone antibiotics. These compounds of different origin, character and properties were degradated by ligninolytic fungi. Desorption behaviour of pollutants from historically contaminated sites, degradation potential of ligninolytic fungi, ongoing degradation mechanisms, transformation products and their toxicity were studied as important factors for evaluation of mycoremediation and its environmental impact. The results show that determination of bioaccessible fraction by sequential supercritical fluid extraction is very useful for precise prediction of biodegradability of pollutants. The evidence that ecotoxicity and...

Cystic fibrosis (CF) is the most common autosomal recessive genetic disorder in Caucasians. Lower respiratory tract of CF patients is colonized by specific bacteria, often leading to chronic infection and lung tissue damage. In this thesis we characterized 338 isolates of S. aureus from 92 Czech CF patients isolated in 2011-2013. Using spa typing and PFGE we detected high clonal heterogenity of this collection with the exception of MRSA strains (resistant to oxacillin; 5% prevalence) which were clonally related. The prevalence of S. aureus MLSB resistance in our collection was high (69 %), which is a serious problem due to common usage of these antimicrobials in clinical practice. A half of the MLSB resistant strains lacked any known determinant of this resistance (ermA, ermC, ermT, msrA). Sequencing of the ribosomal genes revealed a high number of S. aureus strains carrying target site mutations resulting in MLSB resistance (37 %). This is new important information about the staphylococcal strains associated with chronic infections in Czech Republic. Focusing on mutability of analysed strains, we also detected several strains with point mutations or deletions in their mutator genes mutS a mutL. Hypermutability could be responsible for the high rate of ribosomal mutations and for the presence of...

The variety of bacteria and their genomes sometimes causes conservation of homologue molecules to be displayed not in sequence but in secondary and tertiary structures. In the case of the regulatory 6S RNA, sequence homologues have been found in over 100 bacterial species so far. However, none were found in the genus Streptomyces. The unique genome of these soil- dwelling bacteria, known for their capacity to produce antibiotics, has a high G/C content and diverges substantially from distantly related bacteria. Yet in the non-coding 6S RNA it is the secondary structure that is crucial for its function. The 6S RNAs trap sigma factors by mimicking target promoter sequences in order to help with switching sets of expressed genes during developmental transitions. 6S-like RNA genes in Streptomyces coelicolor have been computationally predicted by comparison of in silico modelled secondary structures of known 6S RNAs. The aim of this thesis was the verification of these 6S-like RNA predictions. The experimental approach was based on RNA co-immunoprecipitation (RNA CoIP), as well as RT- PCR from RNA samples. The outcomes of this project are the detection of six novel ncRNA transcripts with possible 6S-like RNA functions, which also served as the wet-lab verification of the in silico prediction technique...

Charles University Faculty of Pharmacy in Hradec Králové Department of Biological and Medical Sciences Study program: Specialist on Laboratory Methods Autor: Bc. Marcela Vízková Supervisor: PharmDr. Ondřej Janďourek, Ph.D. Title: In vitro screening of novel potentially active antibacterial compounds III Since the discovery of penicillin, antibiotics have become part of modern therapeutic approaches. But the global spread of resistance makes their future uncertain. It is necessary to find new antibacterial substances useful in practice. As resistance is a global threat, the theoretical part deals with this issue. In addition to resistance, the theoretical part also briefly describes the antibiotics used, including new antibiotics, which were recently registered or likely to be registered. For selected groups, their mechanism of action is described in detail. Sensitivity should be determined to correctly indicate the antibiotic treatment. For this reason, the theoretical part also describes methods by which the sensitivity of a microbe to an antibiotic can be determined qualitatively or quantitatively. The theoretical part does not neglect the history of the development of antibacterial substances and familiarization with antibiotic policy in the Czech Republic. This diploma thesis is based on...

Antibiotics are substances that inhibit the growth of microorganisms and are widely used in modern medicine. High consumption of antibiotics correlates with their elevated occurence in sewage systems, from where they are further released into the environment. The threat of their occurrence in the environment is in triggering the formation and spread of antibiotic resistance. This thesis focuses on the removal of selected antibiotics and partly on the antibiotic resistance from wastewater by advanced oxidation processes (AOPs). AOPs are based on the creation of highly reactive hydroxyl radicals, which are able to oxidize even highly persistent substances. The thesis focuses on the purification of effluents from municipal wastewater treatment plants (WWTP), which are identified as the main source of pharmaceutical pollution in the environment, by AOPs mainly based on ozonation. These processes were tested under laboratory conditions on model water as well as under real conditions as the tertiary stage of the treatment at Brno-Modřice WWTP under various operating states. As the results of the performed experiments show, it could be concluded that the studied AOPs are capable of effective degradation of studied antibiotics from the treated medium. Under real conditions, the antibiotics sulfamethoxazole, trimethoprim, azithromycin and clarithromycin were monitored. Output concentrations in each operational state were achieved to be below the limit of detection for all four antibiotics. The application of AOPs based on ozonation as the tertiary step of the treatment also had a positive effect on the reduction of microbial contamination and antibiotic resistance. Within the pilot plant experiments, a reduction of up to 4 orders of magnitude of E.coli, coliform microorganisms and a reduction of their resistant strains in the range of 1.4 - 4.0 logs were observed, compared to the effluent from the WWTP.

Water pollutants, such as pharmaceuticals, became an important public health issue over the last years for their extensive presence in the aquatic ecosystem. Among several pollutants, antibiotics are especially worrying because of their potential to induce antimicrobial resistance in microorganisms. The inability of wastewater treatment plants (WWTPs) to effectively remove these pollutants makes necessary to find alternative methods for their elimination. Photocatalysis may become an alternative process since it allows rapid and efficient removal, transforming the initial compound into harmless products. It is a promising method because it uses nanomaterials that are highly photocatalytically active, photo-stable, and non-toxic. Anticipating the need for safe and more efficient water treatment methods, the scope of this thesis concerns the synthesis of different photocatalytic materials, as well as their characterization, determination of their photocatalytic properties, and respective reusability. In this context, the polymeric nanocomposites were produced by electrospinning and solvent casting, and the photocatalytic magnetic particles by co-precipitation and sol-gel. Their different morphologies and characteristics explain their different photocatalytic properties. Some of these materials overcome the limitations of the already existing materials regarding reusability and photocatalytic properties. A direct comparison of these materials in the literature proves difficult, as the experimental conditions, such as irradiation and types of photoreactors, are different among the different research groups. This thesis overcomes such limitations and therefore provides insights into the relative performance of different immobilization alternatives tested under identical conditions. The first task in this thesis is to provide evidence for the presence of pharmaceuticals in wastewater and the ability of the photocatalysts that were later intended to be immobilized to degrade them. In particular, it concerned pharmaceuticals detected on the wastewater effluent from Kaditz, Dresden, Germany. It was analyzed the degradation of 14 pharmaceuticals with initial concentrations higher than 0.3 µg L–1. Suspended commercial nanoparticles of titanium dioxide (TiO2) P25 and zinc oxide (ZnO) were used as photocatalysts. It led to a considerable degradation of the analyzed pharmaceuticals by both catalysts. ZnO nanoparticles degraded 95 % of these pharmaceuticals after 40 min under ultraviolet radiation (UV), while TiO2 took more than six times longer to reach the same degradation level. Systems using suspended photocatalysts have been shown to successfully degrade pharmaceuticals. The technique, however, has some disadvantages. In particular, it adds an additional and expensive filtration or sedimentation step to remove the photocatalyst at the end of the process. Moreover, without a commercial-scale recycling process, these types of methods prove to be cost-ineffective. In light of the need to reuse photocatalysts, this work focuses on the immobilization of photocatalytic nanoparticles, such as ZnO, TiO2, TiO2/graphene oxide (GO), and tungsten oxide (WO3) and on the posterior use in the degradation of a model pollutant. The photocatalysts were immobilized by solvent casting in poly(vinylidene difluoride-co-trifluoroethylene) (PVDF-TrFE), and by electrospinning in PVDF-TrFE and poly(methyl methacrylate) (PMMA) and their reuse was tested. Polymers are common materials suitable to be in contact with water. Therefore, these materials can be applied as valid catalysts support tools to remove organic contaminants from water. In this context, ZnO showed high toxicity towards Vibrio fischeri and consequently it should not be used, as it might have potential environmental impacts and biological effects. The TiO2 nanocomposites produced by electrospinning showed improved surface area and higher porosity compared to the solvent casting method, which is important for water percolation. In addition to the benefits of immobilization, TiO2/GO particles immobilized in the PVDF-TrFE electrospun achieved higher degradation rates under simulated sunlight. It increased the photocatalytic degradation when compared with the nanocomposites prepared with pristine TiO2, in UV and simulated sunlight. Therefore, it allows for further savings in operation costs by removing the necessity of UV lamps. However, immobilization systems have the disadvantage of losing surface area when compared to the traditional suspension systems. These studies indicate that magnetic nanoparticles are a suitable approach to address this issue, as they act as an immobilized form of the catalyst but offer high surface area, similar to the suspended systems. The prepared magnetic nanoparticles exhibited high photocatalytic activity and high reusability since the magnetic nanoparticles can be easily recovered by means of an external magnetic field and further reused. It was observed that with these materials and exposure to UV radiation or simulated sunlight, the studied compounds were degraded. UV radiation, the support, and the photocatalysts per se provide no significant degradation of the tested compounds. In conclusion, the produced nanomaterials offer an ecologically promising and efficient method to mitigate environmental pollution, by-passing many of the current issues that prevent the application of the nanomaterials for water treatment. This method may be combined with conventional water treatment systems providing a cost-efficient technique to handle the degradation of organic pollutants in aqueous systems under visible light or UV. / Die Präsenz von Pharmazeutika in aquatischen Ökosystemen wurde in den letzten Jahren zu einem wichtigen Thema der öffentlichen Gesundheit. Unter anderem sind Antibiotika besonders besorgniserregend wegen ihres Potenzials, in Mikroorganismen Resistenzen zu verursachen. Von Kläranlagen können diese Schadstoffe nicht wirksam entfernt werden, deshalb müssen alternative Methoden für deren Beseitigung gefunden werden. Photokatalyse hat in diesem Zusammenhang das Potenzial der Alternative zu herkömmlichen Prozessen, da sie eine schnelle und effiziente Entfernung ermöglicht und die Ausgangsstoffe in harmlose Produkte umwandelt. Sie ist eine vielversprechende Methode, da sie Nanomaterialien verwendet, die photokatalytisch hochaktiv, lichtstabil und ungiftig sind. Die vorliegende Arbeit beschäftigt sich mit der Synthese unterschiedlicher photokatalytisch aktiver Materialien, der Charakterisierung ihrer photokatalytischen Eigenschaften, sowie ihrer Wiederverwendbarkeit. In diesem Zusammenhang wurden polymere Nanokomposite durch Elektrospinning und Solvent-Casting, sowie photokatalytisch aktive, magnetische Partikel durch Co-Precipitation und Sol-Gel-Technik, hergestellt. Es stellte sich heraus, dass Unterschiede in der Morphologie und in anderen Merkmalen die verschiedenen photokatalytischen Eigenschaften dieser Materialien erklären können. Einige dieser Materialien zeigten deutliche Verbesserungen gegenüber bereits Vorhandenen hinsichtlich Wiederverwendbarkeit und photokatalytischer Eigenschaften. Ein direkter Vergleich mit Literaturdaten erwies sich oft als schwierig, da die experimentellen Bedingungen, wie z.B. Bestrahlungsstärke und Art des Photoreaktors der verschiedenen Forschungsgruppen unterschiedlich waren. Die vorliegende Arbeit stellt eine bessere Vergleichbarkeit her, indem sie alle erzeugten Materialien unter identischen Bedingungen testet. Der erste Teil dieser Arbeit beschäftigt sich damit, die Anwesenheit von Arzneimitteln im Abwasser nachzuweisen und außerdem die Aktivität der Photokatalysatoren, die später eingesetzt werden sollen, zu testen. Hier handelt es sich insbesondere um Arzneimittel, die im Abwasser aus der Kläranlage Kaditz, Dresden, gefunden wurden. Es wurde der Abbau von 14 Arzneimitteln mit Anfangskonzentrationen von mehr als 0.3 μg L-1 analysiert. Als Photokatalysatoren wurden suspendierte kommerzielle Nanopartikel aus Titandioxid (TiO2) P25 und Zinkoxid (ZnO) eingesetzt. Es wurde ein deutlicher Abbau der analysierten Arzneimittel durch beide Katalysatoren festgestellt. ZnO-Nanopartikel reduzierten die Arzneimittelkonzentration in 40 min um 95% unter UV-Strahlung (UV), während bei TiO2 zum Erreichen des gleichen Abbaugrades die 6-fache Zeit nötig war. Es wurde gezeigt, dass Systeme mit suspendierten Photokatalysatoren Arzneimittel erfolgreich abbauen können. Nachteilig ist jedoch der anschließend notwendige, teure Filtrations- oder Sedimentationsschritt zur Entfernung des Photokatalysators. Darüber hinaus erwiesen sich Methoden ohne kommerziell umsetzbares Recyclingverfahren als ökonomisch ineffizient. Angesichts der Notwendigkeit, Photokatalysatoren wiederzuverwenden, konzentriert sich die vorliegende Arbeit auf die Immobilisierung von photokatalytischen Nanopartikeln, wie z.B. ZnO, TiO2, TiO2/Graphenoxid (GO) oder Wolframoxid (WO3) und auf die spätere Verwendung für den Abbau eines Modell-Schadstoffs. Die Photokatalysatoren wurden durch Solvent-Casting in Poly(vinyliden-difluorid-co-trifluorethylen) (PVDF-TrFE) und durch Elektrospinning in PVDF-TrFE und Poly(methylmethacrylat) (PMMA) immobilisiert. Anschließend wurde ihre Wiederverwendbarkeit getestet. Diese Polymere sind handelsübliche Materialien, die für den Wasserkontakt geeignet sind. Daher können diese als Binder für Katalysatoren zur Entfernung organischer Verunreinigungen aus Wasser genutzt werden. ZnO zeigte dagegen eine hohe Toxizität gegenüber Vibrio fischeri, weshalb ein Einsatz in wässrigem Medium wegen potenzieller Umweltauswirkungen nicht geeignet erscheint. Die durch Elektrospinnen hergestellten TiO2-Nanokomposite zeigten im Vergleich mit den durch Solvent-Casting hergestellten eine verbesserte Oberfläche mit höherer Porosität, was für die Wasser-Perkolation wichtig ist. Vergleicht man die untersuchten Polymerfilm-Komposite hinsichtlich ihrer Abbaugeschwindigkeiten unter simuliertem Sonnenlicht und UV-Licht, dann erreichten die TiO2/GO-Partikel, die durch Elektrospinning in PVDF-TrFE immobilisiert wurden, die höchste Geschwindigkeit. Die Möglichkeit des Einsatzes von Sonnenlicht anstelle von UV-Lampen führt zu Kosteneinsparung.

Kritiskt sjuka patienter med infektioner är en börda för sjukvården och 70 % av alla patienter på intensivvårdsavdelningar är ordinerade antibiotika. Antibiotika binder till proteiner i blodet, men enbart den icke-proteinbundna (fria) fraktionen kan diffundera över kapillära membran och binda till receptorer. Standardproteinbindningsgrad för olika antibiotika har utvecklats från studier på friska frivilliga och doseringen av läkemedlen är anpassade därefter. Den totala koncentrationen av antibiotika i patienters blod är vanligen representativ för den farmakologiska effekten. Dock kan vissa sjukdomar påverka proteinbindningsgraden vilket resulterar i en större eller mindre mängd fria antibiotika i blodcirkulationen. Det här kan i sin tur resultera i toxicitet eller otillräcklig effekt av läkemedlet. Syftet med det här projektet var att utveckla en analytisk metod för att bestämma den fria koncentrationen av Beta-Lactam antibiotikan cefotaxim, flukloxacillin, kloxacillin och piperacillin i plasma. En metod utvecklades med ultrafiltrering för extraktion av den fria fraktionen och högupplösande vätskekromatografi och tandem masspektrometri, UHPLC-MS/MS, för kvantifiering av analyterna. Metoden validerades delvis enligt den Europeiska Läkemedelsmyndighetens riktlinjer för bioanalytisk metodvalidering. / Infections in critically ill patients are a problem for the healthcare system and at any one time, 70 % of all intensive care unit (ICU) patients are treated with antibiotics. Antibiotics bind to proteins in the blood, but only unbound drug can diffuse over capillary membranes and bind to the targeted receptor. Standard protein binding percentages for antibiotics have been developed from studies on healthy volunteers and dosing regimens for patients are adapted accordingly. The determination of the total concentration of antibiotics in patients’ blood samples is, based on the standard percentages, ordinarily representative for the pharmacological effect of the antibiotic. However, certain conditions that are common in critically ill patients can alter protein binding percentages, resulting in a larger or smaller unbound fraction. This in turn can result in toxicity or therapeutic failure. The aim of this project was to develop an analytical method for the determination of the unbound concentration of the Beta-Lactam antibiotics cefotaxime, flucloxacillin, cloxacillin and piperacillin in plasma. A method was successfully developed using ultrafiltration for the extraction of unbound analytes and ultra high performance liquid chromatography tandem mass spectrometry, UHPLC-MS/MS, for their quantification. The method was partly validated according to the European Medicines Agency’s guidelines on bioanalytical method validation.

Background: In preterm infants with premature rupture of membranes, antibiotic treatment is frequently started but rates of early onset sepsis are lower. In line with national guidelines, a stratified approach in the decision to start antibiotic treatment using maternal history, clinical impression and biomarkers has been implemented in our level III neonatal center and its results are evaluated. - Methods: Retrospective cohort study of all preterm newborns with rupture of membranes at least 1 h prior to delivery admitted to our tertiary neonatal intensive care unit. Data on antibiotic exposure, mortality and major neonatal complications were extracted from the electronic patient charts to evaluate the effects and safety of our stratified approach. - Results: Four hundred fifty-six infants met the inclusion criteria. 120 (26%) received primary antibiotics whereas 336 (74%) did not. Of those receiving primary antibiotics, 13 (11%) had a blood culture positive sepsis, 46 (38%) met the criteria of clinical sepsis and in 61 (51%) sepsis was ruled out and antibiotics were stopped after 48-96 h. All infants with blood culture positive sepsis were identified and treated within the first 24 h of life using this approach. None of the 336 infants who were not started on antibiotics primarily needed antibiotic therapy within the first 5 days of life. There were no deaths or major neonatal complications in the group that did not receive empiric antibiotics. - Conclusions: Our stratified approach for preterm infants with premature rupture of membranes allows a safe reduction of antibiotic exposure even in this high risk population. As a result, only 25% of high risk preterm newborns are treated with antibiotics of which more than half receive less than 5 days of treatment. To treat one infant with blood culture positive sepsis, only 9 infants receive empiric antibiotics.

Over the last years, varieties of technologies for biofilm analysis were developed and established. They work on different principles and deliver information about biofilms on different information levels. In this work, chip-calorimetry was applied as an analytical tool that measures heat produced from biofilms. Any change of metabolism in biofilms is reflected by a changed heat flow. The heat, which is the integral of the heat flow vs. time, is quantitatively related to the growth stoichiometry of the biofilm, as described by the Hess’ Law. The heat flow is related to the growth kinetics with the reaction heat as proportionality factor. The results from the calorimetric measurement thus, deliver general information about growth stoichiometry and kinetics. The other interpretation of calorimetric results bases on the assumed proportionality between heat flow and oxygen consumption rate (- 460 kJ/mol ). This ratio is called oxycaloric equivalent. Because in case of aerobic growth the majority of oxygen is consumed in catabolic processes during the electron transport phosphorylation, calorimetry is assumed to provide information about the catabolic side of the metabolism. The newly developed chip-calorimeter applied in this work is much more suitable for biofilm studies compared to conventional microcalorimeters due to the flow-through design of the calorimetric chamber. The measurement of undisturbed growing biofilms and the comparison with conventional biofilm analysis tools (i.e. plate counts, confocal laser scanning microscopy (CLSM), and the determination of intermediates’ concentrations (e.g. ATP)) demonstrate the proper functionality of the calorimetric method and the related cultivation procedure by delivering measurement results in the range of literature values. However, when the biofilms were challenged with antimicrobial agents i.e. antibiotics, bacteriophage, and predatory bacteria, the calorimetric results surprisingly deviated from the reference analyses. By combining the results of the calorimetric and reference analyses, additional information about the antimicrobial effects on biofilms can be acquired. Combination of heat measurement and plate counts, which is one of the most conventional approaches, demonstrated that antimicrobials (especially the bactericidal acting kanamycin) could cause the loss of culturability while the cells were still metabolically active. The measurement of ATP content resulted in values out of the typical range, which indicated that antimicrobial treatments disturbed the cellular ATP regulation and the ATP concentration was no longer linearly correlated to the cell number. ATP measurements are therefore not suitable for antimicrobial susceptibility testing. The comparison of heat profiles with the biovolume determined by quantification of microscopic images shows an elevated cell specific heat production rate after the introduction of some antimicrobials (antibiotics and bacteriophage). In case of antibiotics, this can be explained as a consequence of the bacterial defense mechanisms. Most of the described defense mechanisms against antibiotics need biological energy and therefore drive the electron transport phosphorylation (ETP). In case of biofilm treatments with bacteriophage, the trigger of increasing ETP might be the synthesis of phage proteins, hull material, and genetic information molecules. In aerobic conditions, oxygen is used as terminal electron acceptor. Elevated ETP leads therefore to an increase in oxygen consumption, which correlates to the heat production using oxycaloric equivalent as a factor. These correlations explain the increase of cell specific heat productions as biofilms were challenged by antibiotics and bacteriophage. However, also a decrease of specific heat production was observed (in case of predatory bacteria). Here, the predatory bacteria activity caused various damages in host cells, including the interruption of ETP. With these experiments, chip-calorimetry was demonstrated as a promising complementary tool in biofilm research, which provides deeper insights about metabolic activity and alterations. It benefits from the noninvasive handling and the online, real-time measurement that allow the method to be applied for monitoring purposes. Furthermore, its miniaturized dimension allows easy integration in more complex analytic systems and also reduces experiment costs with minimal media/chemical consumption. This thesis also demonstrates the potential development of chip-calorimetry to be more suitable for routine analyses. The use of superparamagnetic beads as matrix to grow biofilms allows regulated transfer of biofilm samples into and from the measurement chamber. This was an initial step towards automation and higher-throughput analysis. One further outcome of the thesis is based on the highly interesting fact about the elevated heat production rate of the host cells induced by the phage infection observed in the chip- calorimetric experiments. The volume specific detection limit of the chip-calorimeter is lower compared to a commercial microcalorimeter. Thus, the infection effect of phages was additionally measured in microcalorimeter to get better quantitative information about the thermal effect of the infection. The results showed that the immediate heat increase after the addition of phage into the solution of the host cells appeared to be quantitatively related to the infection factor, MOI (Multiplicity of Infection). Unfortunately, microcalorimetric measurements in closed ampoules are often subjected to the oxygen limitation. Thus, this problem of microcalorimetric measurement has been addressed. The combination of experimental results and mathematical modeling showed that the rate of metabolism in the static ampoules is defined by the diffusion rate of oxygen into media. This factor has to be considered while designing biological experiments in closed calorimetric measuring chambers and interpreting the calorimetric results for their biological meaning. Some possible solutions to overcome the oxygen bioavailability problem are e.g. to design the experiments with low biomass, or by using media with elevated density to float the biomass at the interface to air and thus to reduce the diffusion path.

Die Umsetzung des Park-Nucleotids zu Lipid I in der bakteriellen Zellwandbiosynthese wird durch das Enzym MraY katalysiert. Dieses Enzym ist ein interessantes, bisher ungenutztes Target für neuartige Antibiotika. In der vorliegenden Dissertation wurde das fluoreszenzmarkierte Park-Nucleotid, welches für MraY-Assays geeignet ist, totalsynthetisch dargestellt. Die Synthese konnte ausgehend von kommerziell erhältlichem N-Acetylglucosamin in 14 Stufen mit einer Gesamtausbeute von 4 % erfolgreich durchgeführt werden. Dabei wurden einige Schritte auf Basis einer literaturbekannten Synthese gründlich optimiert und neue Wege zur Darstellung des Peptids und anschließender Kupplung mit einem Kohlenhydrat Baustein gefunden. Im Zuge dieser neuen Syntheseroute wurde die Uridindiphosphat-N-Acetylmuraminsäure, als Substrat für MurC-Assays, synthetisiert. Dies gelang in einer achtstufigen Synthese ausgehend von der geschützten N-Acetylmuraminsäure in einer Gesamtausbeute von 15 %. Die Muraymycine, eine Klasse von natürlichen Nucleosid-Antibiotika, inhibieren das Enzym MraY effizient. In dieser Dissertation wurde der Grundstein für die Synthese möglichst vielfältiger vereinfachter Muraymycin Analoga gelegt, welche potentielle Inhibitoren für MraY darstellen. Die Harnstoffpeptidseitenkette wurde variiert, um den Einfluss dieses Strukturbausteins auf die Inhibitor-Aktivität intensiver untersuchen zu können. Der Ersatz der anspruchsvoll zu synthetisierenden Aminosäure Epicapreomycidin durch die kommerziell erhältlichen Aminosäuren L-Lysin, L-Ornithin, L-Arginin, L-Alanin und L-Methionin konnte die Synthese der Harnstoffpeptidkette stark vereinfachen. Des Weiteren wurde durch eine stereospezifische Synthese die geschützte 2S,3S-Diaminohexansäure dargestellt, um das in den natürlichen Muraymycinen enthaltene L-Hydroxyleucin, welches häufig mit einer Fettsäure verestert ist, zu ersetzten. Dieses sollte durch den Austausch einer Esterbindung durch eine Amidbindung zu einer Stabilisierung der Muraymycin Derivate führen. Unter Verwendung des in dieser Dissertation beschriebenen Lysin-haltigen Harnstoffpeptids wurden vor kurzen vereinfachte Muraymycin-Analoga synthetisiert und IC50 Werte mittels eines fluoreszenzbasierten MraY-Assays bestimmt. Diese stark vereinfachten Verbindungen weisen bereits gute Inhibitor Aktivitäten auf. Durch die Kombination der verschiedenen, in dieser Arbeit synthetisierten Harnstoffpeptide und Aminosäuren mit unterschiedlichen Uridinderivaten kann zukünftig eine große Anzahl diverser potentieller Inhibitoren dargestellt werden.