"Learning lessons from nature is the key element in the design of tough and light composites."

Orientador: Hideko Yamanaka / Coorientador: Flávio Santos Damos / Banca: Cecilio Sadao Fugivara / Banca: Eder Tadeu Gomes Cavalheiro / Banca: Carla dos Santos Riccardi / Banca: Silvia Helena Pires Serrano / Resumo: Os pesticidas estão entre os poluentes mais preocupantes, devido à toxicidade e presença significativa no ambiente. A sua toxicidade é baseada na capacidade de inibir irreversivelmente a enzima acetilcolinesterase (AChE) que é chave na transmissão de impulsos nervosos. Este trabalho descreve o desenvolvimento de sensor contendo hexapeptídeo, bioinspirado em enzima acetilcolinesterase, para detecção de pesticidas organofosforados e carbamatos. A sequência peptídica (NH3+ - His - Glu - Trp - Arg - Pro - Ser - COO-) foi imobilizada sobre nanopartículas magnéticas (Fe3O4) previamente sintetizadas, modificadas com quitosana e posteriormente funcionalizadas com 1,12-diaminododecano. As condições experimentais de imobilização do peptídeo foram otimizadas, sendo estas: concentração 5,0 x 10-5 mol L-1 e tempo de incubação de 30 minutos a 25 ºC. O grupo carboxílico presente na sequência peptídica foi ativado com o uso de agentes de acoplamento 1-etil-3-(3-dimetilaminopropil) carbodiimida (EDC) e N-hidróxisuccinimida (NHS). A razão de concentração otimizada de EDC/NHS foi de 18,6/12,5 mmol L-1, respectivamente, e tempo de ativação de 60 minutos. O sinal eletroquímico do peptídeo foi monitorado pelo pico de oxidação da histidina, cujo valor é diminuído ao interagir com o pesticida. O perclorato de sódio (NaClO4) 0,1 mol L-1 pH 7,5 foi selecionado como eletrólito suporte. Os parâmetros da voltametria de onda quadrada foram otimizados (frequência de 100 Hz, amplitude de 90 mV e incremento ... (Resumo completo, clicar acesso eletrônico abaixo) / Abstract: Pesticides are among the most worrying pollutants due to toxicity and significant presence in the environment. Its toxicity is based on the ability to irreversibly inhibit the enzyme acetylcholinesterase (AChE) which is key in the transmission of nerve impulses. This work describes the development of a sensor containing hexapeptide, bioinspiring enzyme acetylcholinesterase, for the detection of organophosphorus pesticides and carbamates. The peptide sequence (NH3+ - His - Glu - Trp - Arg - Pro - Ser - COO-) was immobilized on previously synthesized magnetic nanoparticles (Fe3O4), modified with chitosan and subsequently functionalized with 1,12 - diaminododecane. The experimental conditions of immobilization of the peptide were optimized, being: 5,0 x 10-5 mol L-1 concentration and incubation time of 30 minutes at 25 ºC. The carboxyl group present in the peptide sequence was activated with the use of 1-ethyl-3- (3-dimethylaminopropyl) carbodiimide (EDC) and N-hydroxysuccinimide (NHS) coupling agents. The optimum concentration ratio of EDC / NHS was 18.6 / 12.5 mmol L-1, respectively, and activation time of 60 minutes. The electrochemical signal of the peptide was monitored by the histidine oxidation peak, whose value is decreased when interacting with the pesticide. Sodium perchlorate (NaClO4) 0.1 mol L-1 pH 7.5 was selected as supporting electrolyte. The parameters of the square wave voltammetry were optimized (frequency of 100 Hz, amplitude of 90 mV and increment of sweep of 6 mV) using a matrix of factorial planning. The preconcentration time of the peptide with the pesticide was fixed in 5 minutes. The sensor presented linear response in the studied concentration ranges, with detection limits of 6.0 x 10-11 mol L-1 and 4.0 x 10- 10 mol L- 1 for carbofuran and chlorpyrifos, respectively. The storage in the refrigerator at ± 4 °C allowed 85% stability of the immobilized peptide after a period of... / Doutor

Apprenant de la nature, les architectures spécifiques de certains organismes vivants sont devenues l'une des idées dominantes dans le développement de nouvelles générations de matériaux synthétiques. Dans cette optique, la structure lamellaire de la nacre peut servir de modèle pour la fabrication de nouveaux matériaux composites à matrices métalliques. Un nouveau procédé de métallurgie des poudres, appelée métallurgie des poudres « plaquettes » (FPM), a ainsi été développée pour fabriquer des matériaux composites à matrice métallique à structure lamellaire.L’objectif de ce travail de thèse est l'utilisation du procédé FPM (en utilisant le broyage mécanique (BM) et le frittage SPS), pour la fabrication de matériaux architecturés lamellaires et bioinspirés de structure nacre. Nous avons montré la possibilité de fabriquer, à partir de poudre plaquettes, des matériaux lamellaires anisotropes monolithiques à base de titane et d’alliages de titane ainsi que des matériaux composites Ti/C. Nous avons également montré les avantages de l'architecture multicouches sur l'amélioration des propriétés mécaniques (dureté) du Ti et de TA6V avec une anisotropie de la dureté entre les sections transversale et longitudinale. L’augmentation de la dureté de ces matériaux lamellaires, par rapport aux matériaux non-lamellaire, est liée principalement à l'épaisseur des "plaquettes" qui est contrôlée par le temps de BM, ainsi que par l’effet de la microstructure affinée et de l’écrouissage du matériau lamellaire.Nous avons également montré la possibilité de fabriquer des matériaux composites lamellaires in-situ Ti/TiC par BM (en présence d'acide stéarique) et frittage SPS, avec la possibilité de contrôler la teneur en TiC en jouant sur les conditions de BM (temps BM et taux d’acide stéarique). Ce matériau composite permet une amélioration de la dureté et du module de Young attribuée à la phase de TiC formée. / Learning from nature, biological design has become one of the prevailing ideas in developing new generations of synthetic materials. In the strengthening and toughening exploration of composite materials, nacre lamellar structure may serves as a model system of tremendous interest. A novel powder metallurgy (PM) strategy, called flake PM, was developed to fabricate bulk metal matrix composite materials with laminated structure.The aims of this thesis is the use of flakes PM (using ball milling and SPS sintering), for the fabrication of biomimetic titanium and titanium alloys nacre’s laminated structures and of titanium/carbon composite materials. This process showed the possibility of the fabrication of laminar material with anisotropic microstructure. We proved the advantages of the layer’s architecture on the improvement of Ti and TA6V mechanical properties (hardness) with hardness anisotropy between the cross section and the longitudinal one. The hardness of this material is related to the thickness of the "flakes" which is controlled by the time of BM. This strengthening was also attributed to the flake thickness, the refined microstructure and the hardening of the lamellar material.We showed also the possibility of fabrication of in-situ Ti/TiC laminated composite materials using BM (in the presence of stearic acid) and SPS sintering, with the possibility of the control of TiC content by controlling the BM conditions (BM time and stearic acid amount). This composite material exhibit improvement of the hardness and Young’s modulus, attributed to the TiC phase formed.

Bio-inspired or biomimetic chemistry deals with the replication of the nature’s fundamental processes, which can help in understanding the functioning of biological systems and develop novel applications. Although a large number of researchers worked towards the replication of natural synthetic pathways through biogenetic syntheses, enzyme mimicry by the small organic molecules and inorganic complexes emerged in leaps and bounds over the years. The development of biomimetic chemistry then continued in designing the molecules that can function like enzymes. And now, with the advent of nanotechnology, nanostructured materials have been shown to exhibit enzyme-like activities (nanozymes). Interestingly, the two distinct fields, biology and materials science, have been integrated to form an entirely new area of research that has captured a great attention. Along with the pronounced application of nanomaterials as drug delivery vehicles, anticancer agents, antimicrobials, etc., research is also focused on designing nanomaterials for the biomimetic applications. The thesis consists of five chapters. The first chapter provides a general overview of the recently discovered nanozymes that mimic heme-peroxidase, oxidase, superoxide dismutase, catalase, haloperoxidase and phosphatase. This chapter also deals with the nanozymes’ application in sensing and immunoassay, and as antioxidants, neuroprotective agents. The factors affecting the nanozymes’ activity and the challenges associated with them is also covered in this chapter. Chapter 2 is divided into two parts and it deals with the biomimetic properties of graphene-based materials. In part A, the remarkable peroxynitrite (PN) reductase and isomerase activities of hemin-functionalized reduced graphene oxide (rGO) is discussed. In part B, the activity of graphene oxide (GO) as peroxide substrate for the glutathione peroxidase (GPx) enzyme is discussed. In chapter 3, the oxidant material, V2O5, is shown to exhibit significant GPx-like antioxidant activity in its nano-form. Chapter 4 deals with the oxidase-like activity of MnFe2O4 nanooctahedrons for the antibody-free detection of major oxidative stress biomarker, carbonylated proteins. In chapter 5, the phosphotriesterase mimetic role of vacancy engineered nanoceria is discussed. instead of H2O2 for glutathione peroxidase (GPx) enzyme. As partial reduction of GO was observed when treated with GPx enzyme due to the fact that large sheet-like structures cannot be accessible to the active site, we studied the reaction with some GPx mimetics (Fig. 2). Varying the concentration of cofactor glutathione (GSH) required for the reaction, GPx mimic, ditelluride, could accomplish the reduction of GO following Michaelis-Menten kinetics. As the structure of GO is elusive and under active investigation, our study highlights the presence of peroxide linkages as integral part of GO other than hydroxyl, epoxy and carboxylic groups. This study also highlights an important fact that the modification of GO by biologically relevant compounds such as redox proteins must be taken into account when using GO for biomedical applications because such modifications can alter the fundamental properties of GO. Figure 2. The GO reductase and decarboxylase activities of GPx mimetic ditelluride compound, suggesting the presence of peroxide linkages on GO. In chapter 3, we have discussed about the novel antioxidant nanozyme that combats oxidative stress. During our attempts in the investigation of antioxidant nanozymes, we surprisingly noticed that the oxidant material, V2O5, shows significant GPx-like antioxidant activity in its nano-form. The Vn readily internalize in the cells and exhibit remarkable protective effects when challenged against reactive oxygen species (ROS). Although Vn has been shown to protect cells from ROS-induced damage, cells treated with bulk V2O5 and few vanadium complexes resulted in generation of ROS and severe toxicity. Detailed investigation on the mechanism of this interesting phenomenon Chapter 4 deals with the development of novel methodology for detection of biomarkers. Inspired by the use of antibodies and enzymes for detection of a specific antigen, we have shown for the first time that the nanozymes can entirely replace antibodies and enzymes in Enzyme-linked Immunosorbent Assays (ELISA). As a specific example, we focused on the antibody-free detection of chief oxidative stress biomarker, carbonylated proteins, as our target. To achieve this, we designed MnFe2O4 nanooctahedrons that can function as oxidase enzyme and form signaling point of detection. We functionalized MnFe2O4 nanooctahedrons with hydrazide terminating groups so that carbonylated proteins can be linked to nanozymes by hydrazone linkage (Fig. 4a). Treatment of various carbonylated proteins (hemoglobin (Hb), Myoglobin (Mb), Cytochrome c (Cyt c), RNase and BSA) coated in well plate with hydrazide-terminated MnFe2O4 nanooctahedrons and then with 3,3’,5,5’-tetramethylbenzidine substrate, resulted in instantaneous detection by well plate reader (Fig. 4b). Considering the challenges and difficulties associated with the conventional methods used to detect such modified proteins, this methodology opens up a new avenue for the simple, cost-effective, instantaneous and entirely antibody-free ELISA-type detection of carbonylated proteins. Our results provide a cumulative application of nanozymes’ technology in oxidative stress associated areas and pave a new way for direct early detection of post translational modification (PTM) related diseases. Figure 4. a) Nanozyme linked to the carbonylated protein coated on a plate through hydrazone linkage. b) General bar diagram showing detection of oxidized (carbonylated) proteins by nanozymes. Synopsis Figure 5. a) A cartoon view of surface of ceria showing vacancy. b) Zoomed portion of high resolution transmission electron microscopic image showing few vacancies on the surface of nanoceria. c) Catalytic mechanism of detoxification of paraoxon at the defect site. In the final chapter, chapter 5, we have discussed about the nanomaterial that can function as phosphotriesterase enzyme. Phosphotriesterase enzyme is a bacterial enzyme that is involved in the rapid hydrolysis of sarin gas-related deadly nerve agents such as paraoxon, parathion and malathion. When encountered with these orgnaophospatetriesters, living beings tend to undergo nerve shock to cause paralysis by inhibiting an extremely important enzyme called acetylcholine esterase. They are also known to cause severe oxidative stress problems and are associated with neurodegenerative disorders. Therefore, curbing the toxic effects and detoxification of these nerve agents is a world-wide concern and many research teams have focused their attention to address this important problem. Working on the development of nanozymes for important problems, we found that nanoceria, especially the vacancy engineered one (Fig. 5a,b), can serve as active mimic of phosphotriesterase enzyme in the presence of N-methylmorpholine (acting as a distal base histidine). Vacancy engineered nanoceria has been shown to catalyze the hydrolysis of high amounts of paraoxon quiet efficiently and within few minutes with very low activation energy and high kcat. Detailed mechanistic investigation revealed that the presence of both Ce(III) and Ce(IV) is very essential for detoxification activity (Fig. 5b). The vacancies on the surface of nanoceria, were the buried Ce(III) ions are directly exposed to the reaction environment, behave as hotspots or enzyme active sites for detoxification reaction (Fig. 5b).

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Das Verständnis natürlicher biologischen Materialien für die Entwicklung neuer biomimetischer Materialien ist von großem Interesse in der Chemie und den Materialwissenschaften. In vielen komplexen biomolekularen Materialien ist die Etablierung der Struktur-Funktionsbeziehungen von Proteinbausteine notwendig, um die Eigenschaften der daraus aufgebauten weichen, biologischen Materialien zu verstehen, wie z. B. die extrazelluläre Matrix. Inspiriert durch bekannte Faltungsmotive von ECM-Proteinen, wurden vereinfachte Modellpeptide entwickelt, um deren Funktion zu untersuchen oder diese als biomimetische Bausteine für synthetische Biomaterialien zu verwenden. Ziel dieser Arbeit war die Synthese von hybriden Hydrogelen, die aus einem synthetischen Polymer und ECM-inspirierten Modellpeptiden zusammengesetzt sind. Insbesondere Kollagen-mimetische Peptide und Coiled-Coil-formende Peptide wurden benutzt, um das biokompatible und hydrophile Polymer Polyethyleneglykol zu vernetzen. Dabei wurde von der Fähigkeit dieser Peptide zur dynamischen Selbstassemblierung Gebrauch gemacht. Unter Verwendung von Kollagen-mimetischen Peptiden mit langsamer Dissoziationskinetik wurden Hydrogele synthetisiert, die weichen, glasartigen Materialien mit einem gestauchten exponentiellen Relaxationsverhalten entsprechen und auch einen Alterungsprozess zeigen. Darüber hinaus wurde gezeigt, dass Netzwerkkonnektivität ein bis dato selten gebrauchter Designparameter ist, um die rheologischen Eigenschaften von Hydrogelen nach Wunsch zu kontrollieren. Die Kombination molekular einstellbarer Vernetzer mit einem Fluoreszenz-Reportersystem, welches deren Zustand auslesen kann, kann detaillierte Einblicke in das Reaktionsvermögen solcher Netzwerke auf mechanische Stimuli ermöglichen. Das Verständnis molekularer Prozesse erlaubt langfristig die Synthese von ECM-inspirierten Biomaterialien, deren Eigenschaften nach Wunsch einstellbar sind und die selbst ihren mikroskopischen und mesoskopischen Zustand anzeigen. / Understanding natural biological materials for the development of novel biomimetic materials has drawn enormous attention from the areas of chemistry and material science. In many complex biomolecular materials, establishing molecular structure-function relationships of proteins forms the basis for understanding the emerging properties of various biological soft materials, such as the extracellular matrix (ECM). Inspired by common association motifs of ECM proteins, simplified model peptides have been developed for functional studies and as biomimetic building blocks for synthetic biomaterials. The aim of this thesis was to utilize ECM-inspired and molecularly controlled model peptides for the synthesis of peptide-polymer hybrid hydrogels. Specifically, collagen-mimetic peptides (CMPs) and coiled coil (CC)-forming peptides were utilized to crosslink the biocompatible and hydrophilic polymer poly(ethylene glycol) (PEG), making use of the ability of these peptides to dynamically self-assemble. Employing CMPs with slow dissociation kinetics, hydrogels have been synthesized that resemble soft glassy materials with compressed exponential relaxation and aging. Furthermore, network connectivity has been shown to be an underutilized design parameter for tuning the rheological properties of hydrogels. Combining molecularly controlled crosslinks with a fluorescence reporter system that allows to read out crosslink status will ultimately allow for more detailed insights into the response of such networks to mechanical perturbation and thus aid the synthesis of ECM-inspired biomaterials with tunable and self-reporting properties.

<p> There is a current interest in exploring novel microstructural architectures that take advantage of the response of independent phases. Current guidelines in materials design are not just based on changing the properties of the different phases but also on modifying its base architecture. Hence, the mechanical behavior of composite materials can be adjusted by designing microstructures that alternate stiff and flexible constituents, combined with well-designed architectures. One source of inspiration to achieve these designs is Nature, where biologically mineralized composites can be taken as an example for the design of next-generation structural materials due to their low density, high-strength, and toughness currently unmatched by engineering technologies.</p><p><br></p> <p>The present work focuses on the modeling of biologically inspired composites, where the source of inspiration is the dactyl club of the Stomatopod. Particularly, we built computational models for different regions of the dactyl club, namely: periodic and impact regions. Thus, this research aimed to analyze the effect of microstructure present in the impact and periodic regions in the impact resistance associated with the materials present in the appendage of stomatopods. The main contributions of this work are twofold. First, we built a model that helped to study wave propagation in the periodic region. This helped to identify possible bandgaps and their influence on the wave propagation through the material. Later on, we extended what we learned from this material to study the bandgap tuning in bioinspired composites. Second, we helped to unveil new microstructural features in the impact region of the dactyl club. Specifically, the sinusoidally helicoidal composite and bicontinuous particulate layer. For these, structural features we developed finite element models to understand their mechanical behavior.</p><p><br></p> <p>The results in this work help to elucidate some new microstructures and present some guidelines in the design of architectured materials. By combining the current synthesis and advanced manufacturing methods with design elements from these biological structures we can realize potential blueprints for a new generation of advanced materials with a broad range of applications. Some of the possible applications include impact- and vibration-resistant coatings for buildings, body armors, aircraft, and automobiles, as well as in abrasion- and impact-resistant wind turbines.</p><br>