Abstract : The objectives of this work were to prepare and characterize films of benzylic amide macrocycles and rotaxanes obtained by functionalisation of an acidterminated self-assembled monolayer (SAM) on gold, and thus to probe the aptitude of these surfaces for applications in the field of the nanotechnologies. We initially studied the self-assembled monolayer of 11-mercaptoundecanoic acid and focused on its composition, structure and organization. We show that the molecules of alcanethiol are oriented with the acid group pointing out from the surface. The film is highly ordered with defect density below 0.2%. We investigated the functionalisation process with the covalently bound Mac-OH macrocycle, with the physisorbed Mac-pyridine macrocycle and with the naphtalimide rotaxane. The latter is also anchored to the SAM through a non-covalent interaction. We focused on the comprehension of both quantitative as qualitative characteristics of the films, such as the degree of functionalisation, their stability with respect to external constraints, their order and homogeneity, their structure and their orientation. By combining techniques such as X-ray photoemission spectroscopy, infrared reflection-absorption spectroscopy, atomic force microscopy, electrochemical and contact angle measurements, we demonstrated that the films of macrocycles reach a high degree of functionalisation. The layers are homogeneous and a preferential orientation of the macrocycle molecules with the plan of the ring tilted with respect to the surface and with the alkyl chains pointing-out from the films is observed. In addition, we studied the possibility of using the macrocycle films for molecular recognition, employing the Fc-Gly-Gly molecule as a model target. Through similar experiments and analysis, films of naphtalimide rotaxane were proven to give a good functionalisation of SAM. The molecule adsorbs with a preferential orientation of the linear axis parallel to the surface and the macrocycle unit normal to it. We characterized the fluorescent properties of the molecule due to the naphtalimide group and showed that when adsorbed on a gold substrate the presence of the self-assembled monolayer prevents total quenching. <br> Résumé : Les objectifs de ce travail étaient de caractériser des films de macrocycles et de rotaxanes de type amide benzylique obtenus par la fonctionnalisation de monocouches auto-assemblées d'alcanethiols, ayant un groupe acide terminal, sur une surface d'or, et ainsi de mettre en évidence certaines des potentialités de ces surfaces en vue d'applications éventuelles dans le domaine des nanotechnologies. Nous avons d'abord étudié la monocouche auto-assemblée de l'acide 11-mercaptoundecanoïque et particulièrement les aspects tels que la composition, la structure et l'organisation du film et nous avons mis en évidence que les molécules d'alcanethiol sont orientées dans le film avec le groupe acide vers l'extérieur de la surface, de façon à pouvoir interagir avec les molécules à greffer, et que le degré d'ordre de la monocouche est très élevé, en montrant celle-ci une fraction de défauts inférieure au 0.2% de l'aire totale du film. L'étude de la fonctionnalisation successive avec le macrocycle Mac-OH, lié de façon covalente, et le macrocycle Mac-pyridine ainsi que la rotaxane naphtalimide, ancrés à travers une interaction non-covalente à la monocouche auto-assemblée, a porté une attention particulière à la compréhension d'aspects tels que le degré de recouvrement de la surface, la stabilité vis-à-vis de contraintes externes, l'ordre et l'homogénéité, ainsi que la structure des films et l'orientation des molécules. Grâce à la combinaison de techniques telles que l'XPS, l'IRAS, les techniques électrochimiques, les mesures d'angle de contact et l'AFM, nous avons mis en évidence que les films de macrocycle atteignent un recouvrement élevé et homogène de la monocouche autoassemblée et qu'une orientation des molécules de macrocycle, avec une inclinaison du plan de l'anneau par rapport à la surface et pointant leurs chaînes alkyles vers l'extérieure du film, est observée. Ensuite, nous avons abordé la possibilité d'impliquer les films de macrocycle en tant que récepteurs moléculaires d'une molécule modèle, la Fc-Gly-Gly. Par une caractérisation similaire, les films de la rotaxane naphtalimide ont montré d'atteindre un recouvrement élevé de la surface de la monocouche avec une orientation privilégiée des molécules avec l'axe parallèle et le macrocycle perpendiculaire à la surface pour pouvoir interagir, à travers les fonctions pyridine du macrocycle, avec la monocouche. De plus, nous avons caractérisé les propriétés fluorescentes de la molécule, résidantes dans son groupe naphtalimide, lorsqu'elle est adsorbée sur un substrat métallique, l'or, affectées par la présence de la monocouche auto-assemblée.

In this work, an electrochemical method based on a cyt c biosensor has been developed, for the detection of selected arsenic and cyanide compounds. Boron Doped Diamond (BDD) electrode was used as a transducer, onto which cyt c was immobilised and used for direct determination of Prussian blue, potassium cyanide and arsenic trioxide by inhibition mechanism. The sensitivity as calculated from cyclic voltammetry (CV) and square wave voltammetry (SWV), for each analyte in phosphate buffer (pH= 7) was found to be (1.087- 4.488 ×10-9 M) and the detection limits ranging from 0.0043- 9.1 μM. These values represent a big improvement over the current Environmental Protection Agency (EPA) and World Health Organisation (WHO) guidelines.

In this work, an electrochemical method based on a cyt c biosensor has been developed, for the detection of selected arsenic and cyanide compounds. Boron Doped Diamond (BDD) electrode was used as a transducer, onto which cyt c was immobilised and used for direct determination of Prussian blue, potassium cyanide and arsenic trioxide by inhibition mechanism. The sensitivity as calculated from cyclic voltammetry (CV) and square wave voltammetry (SWV), for each analyte in phosphate buffer (pH= 7) was found to be (1.087- 4.488 ×10-9 M) and the detection limits ranging from 0.0043- 9.1 μM. These values represent a big improvement over the current Environmental Protection Agency (EPA) and World Health Organisation (WHO) guidelines.

Magister Scientiae - MSc / In this work, an electrochemical method based on a cyt c biosensor has been developed, for the detection of selected arsenic and cyanide compounds. Boron Doped Diamond (BDD) electrode was used as a transducer, onto which cyt c was immobilised and used for direct determination of Prussian blue, potassium cyanide and arsenic trioxide by inhibition mechanism. The sensitivity as calculated from cyclic voltammetry (CV) and square wave voltammetry (SWV), for each analyte in phosphate buffer (pH= 7) was found to be (1.087- 4.488 ×10-9 M) and the detection limits ranging from 0.0043- 9.1 μM. These values represent a big improvement over the current Environmental Protection Agency (EPA) and World Health Organisation (WHO) guidelines. / South Africa

Magister Scientiae - MSc (Chemistry) / Blending polymers together offers researchers the ability to create novel materials that have a combination of desired properties of the individual polymers for a variety of functions as well as improving specific properties. The behaviour of the resulting blended polymer or blend is determined by the interactions between the two polymers. The resultant synergy from blending an intrinsically conducting polymer like polyaniline (PANI), is that it possesses the electrical, electronic, magnetic and optical properties of a metal while retaining the poor mechanical properties, solubility and processibility commonly associated with a conventional polymer. Aromatic polyamic acid has outstanding thermal, mechanical, electrical, and solvent resistance properties that can overcome the poor mechanical properties and instability of the conventional conducting polymers, such as polyaniline.

Magister Scientiae - MSc (Chemistry) / Pollutants such as polycyclic aromatic hydrocarbons (PAHs) are known for their toxic effects which may lead to the cause of degenerative diseases in both humans and animals. PAHs are widespread in the environment, and may be found in water, food, automotive industry and petrochemical industries to name but a few sources. Literature reports have highlighted industrial workplace exposure to PAHs as a leading cause for development of cancer in workers. Particularly, workers in the petrochemical industry are adversely affected and the incidence of skin and lung cancer in this population group is high. The United States of America in its guidelines developed by environmental protection agency (EPA) has identified 18 PAHs as priority pollutants. Among these are anthracene, benzo[a]pyrene and pyrene which have been selected as the focal point of this study due to their significance in the petrochemical industry. Due to the carcinogenic and mutagenic properties reported in literature for certain PAHs, there have been monitoring procedures taken in most countries around the world. The commonly used analytical methods for the detection of PAHs from industrial samples are high performance liquid chromatography (HPLC) coupled to fluorescence detection, membrane filtration, ozonation and reverse osmosis. Analysis of PAHs from the petrochemical industry is typically performed by HPLC method as well as sono-degredation in the presence of oxygen and hydrogen peroxide.

This work investigates the correlation of structural and photovoltaic properties of dyes used in dye-sensitized solar cells. Experimental methods, including ultraviolet-visible spectroscopy, fluorescence spectroscopy, cyclic voltammetry and electrochemical impedance spectroscopy are employed to study optical and electrochemical properties of dye molecules. Computational methods, including density functional theory and time-dependent density functional theory, are used to validate and predict the optical and electronic properties of dye molecules, in their isolated state and once embedded into a working electrode device environment that comprises a dye...TiO2 interface. The results chapters begin with the presentation of a series of quinodimethene dyes that are experimentally validated for their photovoltaic application, and associated computational studies reveal that an inner structural factor - a phenyl ring rotation occurring during the optical excitation process - leads to the competitive photovoltaic device performance of these dyes. Carbazole-based dyes are then systematically studied by computation, especially considering charge transfer paths and binding modes of these dyes on a titania surface. The theoretical models for the basic building block of this chemical family of dyes, known as MK-44, successfully support and explain structural discoveries from X-ray diffraction and reflectometry that impact of their function. A benzothiadiazole-based dye, RK-1, is then systematically studied by both experimental and computational methods, and the results show that the π-bridge composed of thiophene, benzothiadiazole and benzene rings leads to excellent charge separation; and the rotation of these rings during the optical excitation process may well be consistent with the fluorescence spectrum. Finally, the well-known ruthenium-based dyes are theoretically studied to determine the properties of different ligands connected to the metal core of the complex. Conformations with different NCS ligands are calculated in terms of energy and explain well the corresponding results from X-ray diffraction. Acid-base properties of carboxyl groups connected to pyridine ligands in N3 and N749 are theoretically calculated based on thermodynamics and density functional theory. Implicit and explicit models are both adopted to predict these acid dissociative constant values, which are generally in a good agreement with the reported experimental data. The thesis concludes with conclusions and a future outlook.

Submitted by WELDER FRANZINI AMARAL CALLERA null (weldercallera@hotmail.com) on 2017-08-28T21:25:00Z No. of bitstreams: 1 TESE - Welder F A Callera OK.pdf: 2324966 bytes, checksum: 979c488a0e341117b537d2d5a1ec77b2 (MD5) / Rejected by Luiz Galeffi (luizgaleffi@gmail.com), reason: Solicitamos que realize uma nova submissão seguindo a orientação abaixo: O arquivo submetido está sem a ficha catalográfica. A versão submetida por você é considerada a versão final da dissertação/tese, portanto não poderá ocorrer qualquer alteração em seu conteúdo após a aprovação. Corrija esta informação e realize uma nova submissão contendo o arquivo correto. Agradecemos a compreensão. on 2017-08-29T18:03:23Z (GMT) / Submitted by WELDER FRANZINI AMARAL CALLERA null (weldercallera@hotmail.com) on 2017-08-29T18:41:29Z No. of bitstreams: 1 TESE - Welder F A Callera OK.pdf: 2349810 bytes, checksum: 0b00e94e2ccb5b74f2521ba559748736 (MD5) / Approved for entry into archive by Luiz Galeffi (luizgaleffi@gmail.com) on 2017-08-29T18:53:53Z (GMT) No. of bitstreams: 1 callera_wfa_dr_araiq.pdf: 2349810 bytes, checksum: 0b00e94e2ccb5b74f2521ba559748736 (MD5) / Made available in DSpace on 2017-08-29T18:53:53Z (GMT). No. of bitstreams: 1 callera_wfa_dr_araiq.pdf: 2349810 bytes, checksum: 0b00e94e2ccb5b74f2521ba559748736 (MD5) Previous issue date: 2017-08-04 / Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) / Esta tese de doutoramento apresentou o entendimento de processos redox enzimáticos, detalhando o mecanismo envolvido na troca eletrônica, a qual resulta na formação de um produto, por catálise enzimática. Observou-se a influência de um eletrodo sob a ação de um potencial estacionário aplicado (E) na reação enzima/substrato. Realizou-se eletroanálises, como: Voltametria Cíclica (VC) e Espectroscopia de Impedância Eletroquímica (EIE), para a penicilinase. Os resultados obtidos dão indícios de que a reação enzimática se beneficia de determinados potenciais, pois o parâmetro utilizado, Rct, resistência à transferência de cargas, sugere que ocorre maior troca eletrônica em alguns potenciais ótimos (faixa de -0,3 a -0,5 V). A Simulação Molecular serviu para estudar o comportamento atomístico por métodos clássicos (Dinâmica Molecular – DM) para as condições impostas experimentalmente, esclarecendo o mecanismo de reação enzimática por métodos quânticos (DFT – Teoria do Funcional de Densidade) e híbridos (QM/MM), cabendo salientar que a penicilinase não pertence à classe das enzimas oxirredutivas. / This doctoral thesis presented the understanding of enzymatic redox processes, detailing the mechanism involved in the electronic exchange, which results in the formation of a product by enzymatic catalysis. The influence of an electrode under the action of an applied stationary potential (E) on the enzyme/substrate reaction was observed. Electroanalysis was performed, such as: Cyclic Voltammetry (VC) and Electrochemical Impedance Spectroscopy (EIS), for the penicilinase. The results obtained indicate that the enzymatic reaction benefits from certain potentials, since the parameter used, Rct, resistance to the transfer of charges, suggests that there is greater electronic exchange in some optimal potentials (range the -0.3 to -0.5 V). The Molecular Simulation was used to study the atomistic behavior by classical methods (Molecular Dynamics - DM) for experimentally imposed conditions, clarifying the mechanism of enzymatic reaction by quantum methods (DFT) and hybrids (QM/MM). That penicillinase does not belong to the class of oxidoreductive enzymes.

Capacitive deionization is a promising technology for purification and desalination of brackish water with great advantages over current technologies due to its low operating cost and high-water recovery ratio. Most of the system studied relies on the adsorption/desorption capacity of activated carbon electrodes due to its high surface area. However, its specific adsorption capacity is limited since the adsorption is predominantly on the surface of the electrodes. In this thesis we propose the use of polyaniline as a chloride-ion adsorption material. Polyaniline is a redox polymer able to accommodate anions in several of its three states when subjected to an external voltage. To this end, we synthesized polyaniline by electrodeposition technique and its electrochemical behavior was studied. A hybrid CDI system was assembled, using PANI as anode material and activated carbon cloth as cathode, showing outstanding adsorption of 37.26 mg/g Cl at current densities of 250 A/g. The energy consumption of this system was of 0.4979 kWh/m3. Its stability was evaluated over 50 cycles with negligible capacity loss. Along with its use in a CDI system, the aim of this thesis was to understand the mechanisms of operation of this material, by means of its physical and electrochemical characterization, as well as its efficiency and stability through the use of this material in capacitive deionization cells. / Kapacitiv avjonisering är en lovande teknik för rening och avsaltning av bräckt vatten med stora fördelar jämfört med nuvarande teknik på grund av dess låga driftskostnader och höga vattenåtervinningsgrad. De flesta av de studerade systemen bygger på adsorptions/desorptionskapaciteten hos elektroder av aktivt kol på grund av dess stora yta. Dess specifika adsorptionskapacitet är dock begränsad eftersom adsorptionen huvudsakligen sker på elektrodernas yta. I den här avhandlingen föreslår vi att polyanilin används som adsorptionsmaterial för kloridjoner. Polyanilin är en redoxpolymer som kan ta emot anjoner i flera av sina tre tillstånd när den utsätts för en extern spänning. För detta ändamål syntetiserade vi polyanilin genom elektrodepositionsteknik och dess elektrokemiska beteende studerades. Ett hybrid CDI-system monterades med PANI som anodmaterial och aktiverad kolduk som katod, vilket visade en enastående adsorption av 37,26 mg/g Cl vid en strömtäthet på 250 A/g. Energiförbrukningen för detta system var 0,4979 kWh/m3. Systemets stabilitet utvärderades över 50 cykler med försumbar kapacitetsförlust. Förutom användningen i ett CDI-system var syftet med denna avhandling att förstå detta materials funktionsmekanismer genom fysisk och elektrokemisk karakterisering samt dess effektivitet och stabilitet genom användning av detta material i kapacitiva avjoniseringsceller.

La cinétique lente de la réduction de l’oxygène (ORR) est en grande partie responsable de la perte d’énergie de nombreux systèmes de conversion tels que les piles à combustible. Parmi les possibles catalyseurs de l’ORR, les oxydes de type pérovskite sont des candidats prometteurs en milieu alcalin. La présente thèse est consacrée à l’étude de l’activité, du mécanisme et de la stabilité de pérovskites à base de Co et Mn pour l’ORR. Grâce aux techniques d’électrode tournante à disque et disque-anneau (R(R)DE), les études de l’ORR et des transformations d’HO2- sur les couches minces de pérovskite/carbone dans une solution de NaOH ont montré qu’O2 est réduit en OH- via un mécanisme « en série » avec formation d’HO2- intermédiaire. Pour des quantités d’oxyde suffisantes, HO2- est ensuite réduit, ce qui résulte en un mécanisme apparent de 4 électrons. Dans ces électrodes, le carbone joue un double rôle. Il augmente l’activité électrocatalytique en améliorant le contact électrique et il est impliqué dans le mécanisme de l’ORR en catalysant la réduction d’O2 en HO2-, surtout pour les pérovskites à base de cobalt qui sont considérablement moins actives que celles à base de Mn. Néanmoins, l’électrocatalyse de l’ORR semble dégrader les sites actifs des pérovskites. / The sluggish kinetics of the oxygen reduction reaction (ORR) is largely responsible for the energy losses in energy conversion systems such as fuel cells. Among possible inexpensive catalysts for the ORR, perovskite oxides are promising electrocatalysts in alkaline media. The present thesis is devoted to the investigation of the ORR activity, mechanism and stability of some Co and Mn-based perovskites. The rotating (ring) disk electrode (R(R)DE) studies of the ORR and the HO2- transformations on perovskite/carbon thin layers in NaOH electrolyte prove that O2 is reduced to OH- via a “series” pathway with the HO2- intermediate. For high oxide loadings, the formed HO2- species are further reduced to give a global 4 electron pathway. In these electrodes, carbon plays a dual role. It increases the electrocatalytic activity by improving the electrical contact and it is involved in the ORR mechanism by catalyzing the reduction of O2 into HO2-, especially for Co-based perovskites which display lower reaction rates than Mn-based perovskites.